Citrus Sinensis ID: 019009
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 347 | 2.2.26 [Sep-21-2011] | |||||||
| Q5N800 | 504 | Probable chlorophyll(ide) | yes | no | 0.982 | 0.676 | 0.790 | 1e-160 | |
| Q93ZA0 | 496 | Probable chlorophyll(ide) | yes | no | 0.945 | 0.661 | 0.817 | 1e-158 | |
| Q84ST4 | 343 | Chlorophyll(ide) b reduct | no | no | 0.628 | 0.635 | 0.462 | 4e-51 | |
| Q8LEU3 | 348 | Chlorophyll(ide) b reduct | no | no | 0.636 | 0.635 | 0.458 | 2e-49 | |
| Q6NUE2 | 236 | Carbonyl reductase family | N/A | no | 0.530 | 0.779 | 0.295 | 4e-14 | |
| P39483 | 261 | Glucose 1-dehydrogenase 2 | no | no | 0.498 | 0.662 | 0.297 | 1e-13 | |
| Q91VT4 | 236 | Carbonyl reductase family | yes | no | 0.521 | 0.766 | 0.304 | 2e-13 | |
| Q08632 | 271 | Short-chain type dehydrog | N/A | no | 0.547 | 0.701 | 0.282 | 3e-13 | |
| Q7TS56 | 236 | Carbonyl reductase family | yes | no | 0.521 | 0.766 | 0.299 | 3e-13 | |
| Q8N4T8 | 237 | Carbonyl reductase family | yes | no | 0.524 | 0.767 | 0.304 | 6e-13 |
| >sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 564 bits (1453), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/343 (79%), Positives = 305/343 (88%), Gaps = 2/343 (0%)
Query: 6 DEHWSCTCRWFSVV-STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGM 64
+EH R + STRGLGKALAREFLLSGDRVV+ASRS ESV T+ ELEEN++EG+
Sbjct: 163 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGL 222
Query: 65 MAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL 124
A ++ L+HAKV G +CDVC+P DV+KL NFA +E GSIDIWINNAGTNKGF+PL+
Sbjct: 223 SVAKKKQREILLHAKVVGTSCDVCKPEDVKKLVNFAKDELGSIDIWINNAGTNKGFRPLV 282
Query: 125 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 184
F++E+I QIVSTNLVGS+LCTREAM VM+ Q KGGH+FNMDGAGSGGSSTPLTAVYGST
Sbjct: 283 NFSDEDISQIVSTNLVGSLLCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGST 342
Query: 185 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244
KCGLRQ QASL KES+RSKVGVHTASPGMVLTDLLLSGS+++NKQMFN+ICELPETVART
Sbjct: 343 KCGLRQFQASLLKESRRSKVGVHTASPGMVLTDLLLSGSSLRNKQMFNLICELPETVART 402
Query: 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR 304
LVPR+RVVKGSGKAINYLTPPRILLALVTAW+RRGRWFD++GRA+YAAEADRIRNWAE+R
Sbjct: 403 LVPRMRVVKGSGKAINYLTPPRILLALVTAWVRRGRWFDEEGRAVYAAEADRIRNWAESR 462
Query: 305 ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT 347
ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS+G PGT
Sbjct: 463 ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSSG-GPLPGT 504
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Required for proper chloroplast degradation. Involved in chlorophyll b degradation. Oryza sativa subsp. japonica (taxid: 39947) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 4 |
| >sp|Q93ZA0|NYC1_ARATH Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 559 bits (1440), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/328 (81%), Positives = 294/328 (89%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGDRV+V SRSSESV MTV ELE+NLKE M A S++K L AK
Sbjct: 169 STRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAK 228
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V GIACDVC+P DV+KLSNFAV E GSI+IWINNAGTNKGF+PLL+FT E+I QIVSTNL
Sbjct: 229 VVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNL 288
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+GSILCTR AM VM Q GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ S+ KES
Sbjct: 289 IGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKES 348
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
+++ VG+HTASPGMVLT+LLLSGS+I+NKQMFNIICELPETVARTLVPR+RVVKGSGKA+
Sbjct: 349 QKTNVGLHTASPGMVLTELLLSGSSIKNKQMFNIICELPETVARTLVPRMRVVKGSGKAV 408
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRILLA+VT+WLRRGRWFDDQGRALYAAEADR+RNWAENR R S TDAMEMYTEN
Sbjct: 409 NYLTPPRILLAIVTSWLRRGRWFDDQGRALYAAEADRLRNWAENRTRLSLTDAMEMYTEN 468
Query: 320 TWVSVFSLSVVCAFIILSSTGSNTFPGT 347
TWVSVFSLSVVCAFIIL ST ++FPGT
Sbjct: 469 TWVSVFSLSVVCAFIILQSTTPSSFPGT 496
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Involved in chlorophyll b degradation. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 9 EC: 4 |
| >sp|Q84ST4|NOL_ORYSJ Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 151/238 (63%), Gaps = 20/238 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST+G+G ALA+EFL +GD VV+ SRS+E V VT+L KK
Sbjct: 81 STKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDL---------------KKEFGEQH 125
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTN 138
V GI CDV E DV+ L +FA ++ IDIWINNAG+N +KPL++ ++E + ++++TN
Sbjct: 126 VWGIVCDVREGKDVKALVDFARDKMKYIDIWINNAGSNAYSYKPLVETSDEALMEVITTN 185
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+G ++C REA+ +MR+QP+GGHIFN+DGAGS G TP A YG+TK + L SL E
Sbjct: 186 TLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAE 245
Query: 199 SKRSKVG---VHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLVPRIRVV 252
+ ++V VH SPGMV TDLL+SG+T + + F NI+ E VA LVP IR +
Sbjct: 246 LQMNEVNNVMVHNLSPGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLVPNIRAI 303
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Required for chlorophyll b degradation. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 9 EC: 4 |
| >sp|Q8LEU3|NOL_ARATH Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1 | Back alignment and function description |
|---|
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 144/242 (59%), Gaps = 21/242 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST+G+G ALAREFL +GD VV+ SRS+E V V L+E E
Sbjct: 87 STKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE----------------H 130
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTN 138
V G CDV E DV++L ++ IDIWINNAG+N FKPL + ++E++ ++V TN
Sbjct: 131 VWGTKCDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTN 190
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+G +LC REAM +M Q +GGHIFN+DGAGS G TP A YG+TK + L SL E
Sbjct: 191 TLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAE 250
Query: 199 SKRSKVG---VHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLVPRIRVVKG 254
+ V VH SPGMV TDLL+SG+T + + F N++ E E VA LVP IR +
Sbjct: 251 LQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPA 310
Query: 255 SG 256
SG
Sbjct: 311 SG 312
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Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 9 EC: 4 |
| >sp|Q6NUE2|CBR4_XENLA Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 26/210 (12%)
Query: 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 68
S C F +RG+GKA+A+ +V V SR+ E + VTE+ +L
Sbjct: 1 MSKVCAVFG--GSRGIGKAVAKLLAQKDYKVAVISRNLEVAQAAVTEIGAHL-------- 50
Query: 69 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 128
++CDV + ++Q N G+ID +N+AG ++ LL+ +
Sbjct: 51 -------------ALSCDVSKENEIQCTFKEIKNNLGNIDYLVNSAGISRD-ALLLRTRS 96
Query: 129 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 188
E+I ++S NLVG+I + A++ M Q +GG I N+ G+ G ++YG++K GL
Sbjct: 97 EDIMSLLSINLVGTIQTCKVALKGMIQQ-QGGSIVNI-GSIVGHKGNIGQSIYGASKEGL 154
Query: 189 RQLQASLFKESKRSKVGVHTASPGMVLTDL 218
SL KE + + V+ +PG + TD+
Sbjct: 155 IGFSKSLAKEVAKRNIRVNVVAPGFIRTDM 184
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The heteroteramer with HSD17B8 has NADH-dependent 3-ketoacyl-acyl carrier protein reductase activity. May play a role in biosynthesis of fatty acids in mitochondria. The homotetramer may act as NADPH-dependent quinone reductase. Has broad substrate specificity and reduces 9,10-phenanthrenequinone, 1,4-benzoquinone and various other o-quinones and p-quinones (in vitro). Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P39483|DHG2_BACME Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1 | Back alignment and function description |
|---|
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVT-ELEENLKEGMMAAGGSSKKNLVHAK 79
++GLG+A+A F +VVV RS+E + V E+EE + ++ G
Sbjct: 16 SKGLGRAMAVRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGGQAIIVRG----------- 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
DV + DV L AV EFGS+D+ INNAG P + + E Q++ TNL
Sbjct: 65 ------DVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPV-PSHELSLENWNQVIDTNL 117
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKCGLRQLQA 193
G+ L +REA++ + G++ NM SS PL Y ++K G++ +
Sbjct: 118 TGAFLGSREAIKYFVENDIKGNVINM-------SSVHEMIPWPLFVHYAASKGGMKLMTE 170
Query: 194 SLFKESKRSKVGVHTASPGMVLTDL 218
+L E + V+ PG + T +
Sbjct: 171 TLALEYAPKGIRVNNIGPGAIDTPI 195
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Bacillus megaterium (taxid: 1404) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 4 EC: 7 |
| >sp|Q91VT4|CBR4_MOUSE Carbonyl reductase family member 4 OS=Mus musculus GN=Cbr4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 71
C F +RG+G+A+A+ G R+ + SR+ E ++T EL GG+
Sbjct: 4 VCAVFG--GSRGIGRAVAQLMAQKGYRLAIVSRNLEVAKVTAGEL-----------GGNH 50
Query: 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 131
CDV + DVQ G ++ +N AG N+ + T + I
Sbjct: 51 ---------LAFRCDVAKEQDVQSTFQEMEKHLGPVNFLVNAAGINRDSLLVRTKTEDMI 101
Query: 132 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 191
Q+ TNL+GS+L + AM+ M Q GG I N+ G+ G + Y +TK GL
Sbjct: 102 SQL-HTNLLGSMLTCKAAMKTMIQQ--GGSIVNV-GSIIGLKGNVGQSAYSATKGGLVGF 157
Query: 192 QASLFKESKRSKVGVHTASPGMVLTDL 218
SL KE R K+ V+ +PG + TD+
Sbjct: 158 SRSLAKEVARKKIRVNVVAPGFIRTDM 184
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The heteroteramer with HSD17B8 has NADH-dependent 3-ketoacyl-acyl carrier protein reductase activity. May play a role in biosynthesis of fatty acids in mitochondria. The homotetramer may act as NADPH-dependent quinone reductase. Has broad substrate specificity and reduces 9,10-phenanthrenequinone, 1,4-benzoquinone and various other o-quinones and p-quinones (in vitro). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q08632|SDR1_PICAB Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1 | Back alignment and function description |
|---|
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+ +A G +VV+ S++ V + N K
Sbjct: 29 ASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINN------------KSPSSGDG 76
Query: 80 VAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVS 136
V I C DV EP+ V +L + A + FG + I +NNAG T+ + L Q ++EE ++I
Sbjct: 77 VRAIVCKADVAEPSQVAQLFDTAEHAFGPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQ 136
Query: 137 TNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
N G+ LC+REA RV+R GG I N+ + P Y ++K + + L
Sbjct: 137 VNCKGAFLCSREAAKRVVRG--GGGRIINISSSLV-AMPIPRYGAYTASKAAVEMMTRIL 193
Query: 196 FKESKRSKVGVHTASPGMVLTDLLLSGST 224
+E + +++ + +PG V TD+ +G +
Sbjct: 194 AQELRGTQITANCVAPGPVATDMFFAGKS 222
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Picea abies (taxid: 3329) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q7TS56|CBR4_RAT Carbonyl reductase family member 4 OS=Rattus norvegicus GN=Cbr4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 71
C F +RG+GKA+A+ G R+ + +R+ E + T +EL GG
Sbjct: 4 VCAVFG--GSRGIGKAVAQLMAQKGYRLAIVARNLEVAKATASEL-----------GG-- 48
Query: 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 131
+H C++ + DV G ++ +N AG N+ L++ E++
Sbjct: 49 ----IHL---AFRCNIAKEGDVHSTFEEMEKHLGPVNFLVNAAGINRD-SLLVRTKTEDM 100
Query: 132 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 191
+ TNL+G++L R AMR M Q GG I N+ G+ G A Y +TK GL
Sbjct: 101 LSQLHTNLLGTMLTCRAAMRTMIQQ--GGSIVNV-GSIIGLKGNVGQAAYSATKGGLIGF 157
Query: 192 QASLFKESKRSKVGVHTASPGMVLTDL 218
SL KE R K+ V+ +PG + TD+
Sbjct: 158 SRSLAKEVARKKIRVNVVAPGFIHTDM 184
|
The heteroteramer with HSD17B8 has NADH-dependent 3-ketoacyl-acyl carrier protein reductase activity. May play a role in biosynthesis of fatty acids in mitochondria. The homotetramer may act as NADPH-dependent quinone reductase. Has broad substrate specificity and reduces 9,10-phenanthrenequinone, 1,4-benzoquinone and various other o-quinones and p-quinones (in vitro). Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q8N4T8|CBR4_HUMAN Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 71
C F +RG+G+A+A+ G R+ V +R NL+ AAG
Sbjct: 4 VCAVFG--GSRGIGRAVAQLMARKGYRLAVIAR--------------NLEGAKAAAGDLG 47
Query: 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 131
+L +CDV + DVQ G ++ +N AG N+ L++ E++
Sbjct: 48 GDHLA------FSCDVAKEHDVQNTFEELEKHLGRVNFLVNAAGINRD-GLLVRTKTEDM 100
Query: 132 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 191
+ TNL+GS+L + AMR M Q +GG I N+ G+ G +VY ++K GL
Sbjct: 101 VSQLHTNLLGSMLTCKAAMRTMIQQ-QGGSIVNV-GSIVGLKGNSGQSVYSASKGGLVGF 158
Query: 192 QASLFKESKRSKVGVHTASPGMVLTDL 218
+L KE R K+ V+ +PG V TD+
Sbjct: 159 SRALAKEVARKKIRVNVVAPGFVHTDM 185
|
The heteroteramer with HSD17B8 has NADH-dependent 3-ketoacyl-acyl carrier protein reductase activity. May play a role in biosynthesis of fatty acids in mitochondria. The homotetramer may act as NADPH-dependent quinone reductase. Has broad substrate specificity and reduces 9,10-phenanthrenequinone, 1,4-benzoquinone and various other o-quinones and p-quinones (in vitro). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 347 | ||||||
| 255546477 | 517 | short-chain dehydrogenase, putative [Ric | 0.982 | 0.659 | 0.871 | 1e-171 | |
| 224142147 | 436 | predicted protein [Populus trichocarpa] | 0.976 | 0.777 | 0.860 | 1e-169 | |
| 225445234 | 517 | PREDICTED: probable chlorophyll(ide) b r | 0.942 | 0.632 | 0.884 | 1e-167 | |
| 356520529 | 514 | PREDICTED: probable chlorophyll(ide) b r | 0.942 | 0.636 | 0.868 | 1e-165 | |
| 449506622 | 521 | PREDICTED: probable chlorophyll(ide) b r | 0.979 | 0.652 | 0.836 | 1e-164 | |
| 449464672 | 521 | PREDICTED: probable chlorophyll(ide) b r | 0.979 | 0.652 | 0.833 | 1e-163 | |
| 356531269 | 515 | PREDICTED: probable chlorophyll(ide) b r | 0.942 | 0.634 | 0.850 | 1e-163 | |
| 357500769 | 514 | Oxidoreductase [Medicago truncatula] gi| | 0.942 | 0.636 | 0.853 | 1e-161 | |
| 197253299 | 506 | putative chlorophyll b reductase [Nicoti | 0.927 | 0.636 | 0.841 | 1e-160 | |
| 357128420 | 496 | PREDICTED: probable chlorophyll(ide) b r | 0.942 | 0.659 | 0.823 | 1e-159 |
| >gi|255546477|ref|XP_002514298.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223546754|gb|EEF48252.1| short-chain dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 299/343 (87%), Positives = 317/343 (92%), Gaps = 2/343 (0%)
Query: 6 DEHWSCTCRWFSVV-STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGM 64
DEH R + STRGLGKALAREFLLSGDRVVVASRS ESV TV ELEENLKEGM
Sbjct: 176 DEHCRAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSPESVDTTVRELEENLKEGM 235
Query: 65 MAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL 124
+ G+S+ NL HAKV GIAC+VCEP+DVQKL+NFAV EFGSIDIWINNAGTNKGF+PLL
Sbjct: 236 VTTSGTSRTNLAHAKVVGIACNVCEPSDVQKLANFAVKEFGSIDIWINNAGTNKGFRPLL 295
Query: 125 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 184
QF++E+I QIVSTNLVGSILCTREAMRV+ +QPKGGHIFNMDGAGSGGSSTPLTAVYGST
Sbjct: 296 QFSDEDINQIVSTNLVGSILCTREAMRVIMNQPKGGHIFNMDGAGSGGSSTPLTAVYGST 355
Query: 185 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244
KCGLRQLQASLFKE KRSKVGVHTASPGMVLTDLLLSGST++NKQMFNIICELPETVART
Sbjct: 356 KCGLRQLQASLFKECKRSKVGVHTASPGMVLTDLLLSGSTLKNKQMFNIICELPETVART 415
Query: 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR 304
LVPR+RVVKGSGKAINYLTPPRILLALVTAWLR+GRWFDDQGRALYAAEADR+RNWAENR
Sbjct: 416 LVPRMRVVKGSGKAINYLTPPRILLALVTAWLRQGRWFDDQGRALYAAEADRLRNWAENR 475
Query: 305 ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT 347
ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST SN FPGT
Sbjct: 476 ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST-SNPFPGT 517
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142147|ref|XP_002324420.1| predicted protein [Populus trichocarpa] gi|222865854|gb|EEF02985.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 295/343 (86%), Positives = 318/343 (92%), Gaps = 4/343 (1%)
Query: 6 DEHWSCTCRWFSVV-STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGM 64
DEH R + STRGLGKALAREFLLSGD VVVASRS ESV T+ ELEENLKEGM
Sbjct: 97 DEHCRAGPRNVVITGSTRGLGKALAREFLLSGDHVVVASRSPESVDTTIRELEENLKEGM 156
Query: 65 MAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL 124
+ A S++ +L HAKV GIACDVCEP+DVQKL+NFAVNEFGSIDIWINNAGTNKGF+PLL
Sbjct: 157 ITA--SNRTSLAHAKVVGIACDVCEPSDVQKLANFAVNEFGSIDIWINNAGTNKGFRPLL 214
Query: 125 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 184
QFT+E+I+QIVSTNLVGSILCT+EAMR+M +QPKGGHIFNMDGAGSGGSSTPLTAVYGST
Sbjct: 215 QFTDEDIKQIVSTNLVGSILCTQEAMRMMMNQPKGGHIFNMDGAGSGGSSTPLTAVYGST 274
Query: 185 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244
KCGLRQLQASL KE KRSKVG+HTASPGMVLTDLLLSGST++NKQMFNIICELPETVART
Sbjct: 275 KCGLRQLQASLLKECKRSKVGIHTASPGMVLTDLLLSGSTLKNKQMFNIICELPETVART 334
Query: 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR 304
LVPR+RVVKG+GKAI+YLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADR+RNWAENR
Sbjct: 335 LVPRMRVVKGTGKAISYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRLRNWAENR 394
Query: 305 ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT 347
A+FSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGS TFPGT
Sbjct: 395 AQFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGS-TFPGT 436
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225445234|ref|XP_002280953.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic [Vitis vinifera] gi|297738824|emb|CBI28069.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 290/328 (88%), Positives = 307/328 (93%), Gaps = 1/328 (0%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGDRVVVASRS ESV TV ELEENLKEGM+ AGG SK NL AK
Sbjct: 191 STRGLGKALAREFLLSGDRVVVASRSPESVHATVRELEENLKEGMVTAGGPSKTNLERAK 250
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V GIACDVCEP DVQKL+NFAV+EFGSI+IWINNAGTNKGF+PLLQFT+E+I+QIVSTNL
Sbjct: 251 VVGIACDVCEPDDVQKLANFAVSEFGSINIWINNAGTNKGFRPLLQFTDEDIKQIVSTNL 310
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
VGS+LCT+EA+RVMR Q GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE
Sbjct: 311 VGSLLCTQEAIRVMRSQGNGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKEC 370
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
KRS VGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 371 KRSNVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRMRVVKGTGKAI 430
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRILLAL+T WLR+GRWFD+QGRALYAAEADRIRNWAENR RFSFTDAMEMYTEN
Sbjct: 431 NYLTPPRILLALITVWLRQGRWFDEQGRALYAAEADRIRNWAENRTRFSFTDAMEMYTEN 490
Query: 320 TWVSVFSLSVVCAFIILSSTGSNTFPGT 347
TWVSVFSLSVVCAFIILSSTGS +FPGT
Sbjct: 491 TWVSVFSLSVVCAFIILSSTGS-SFPGT 517
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520529|ref|XP_003528914.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/328 (86%), Positives = 304/328 (92%), Gaps = 1/328 (0%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGDRV+V SRS ESV+ T+ ELEENLKEG+ A GSS L HAK
Sbjct: 188 STRGLGKALAREFLLSGDRVIVTSRSPESVQATIKELEENLKEGIANAVGSSLTKLSHAK 247
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V GIACDVCEP DVQ+L+NFAV E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNL
Sbjct: 248 VVGIACDVCEPHDVQRLANFAVKELGHIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNL 307
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
VGSILCTREAMRVMR+Q GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE
Sbjct: 308 VGSILCTREAMRVMRNQAIAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKEC 367
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
KRSKVGVHTASPGMVLTDLLLSGST+QN+QMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 368 KRSKVGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELPETVARTLVPRMRVVKGTGKAI 427
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADR+RNWAE+RARFSFTDAMEMYTEN
Sbjct: 428 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRLRNWAEDRARFSFTDAMEMYTEN 487
Query: 320 TWVSVFSLSVVCAFIILSSTGSNTFPGT 347
TW+SVFSLSVVCAFIILSSTGSN PGT
Sbjct: 488 TWLSVFSLSVVCAFIILSSTGSN-LPGT 514
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449506622|ref|XP_004162801.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 287/343 (83%), Positives = 311/343 (90%), Gaps = 3/343 (0%)
Query: 6 DEHWSCTCRWFSVV-STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGM 64
+EH S R + STRGLGKALAREFLLSGDRVVVASRSSESV+ T+ ELEENLK G+
Sbjct: 181 EEHCSAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVQETLRELEENLK-GL 239
Query: 65 MAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL 124
M GSS K+L HAKV G C+VC+P DV KL+NF +NE GSIDIWINNAGTNKGF+PLL
Sbjct: 240 MVRSGSSNKSLAHAKVVGTTCNVCDPEDVHKLANFTLNELGSIDIWINNAGTNKGFRPLL 299
Query: 125 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 184
QFT+E+I QI+STNLVGS+LCTREAMRVMR+Q KGGHIFNMDGAGSGGSSTPLTAVYGST
Sbjct: 300 QFTDEDITQILSTNLVGSLLCTREAMRVMRNQAKGGHIFNMDGAGSGGSSTPLTAVYGST 359
Query: 185 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244
KCGLRQLQ+SL KE +RS VGVHTASPGMVLTDLLLSGST++NKQMFNIICELPETVART
Sbjct: 360 KCGLRQLQSSLLKECRRSNVGVHTASPGMVLTDLLLSGSTVRNKQMFNIICELPETVART 419
Query: 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR 304
LVPR+RVVKG+GKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR
Sbjct: 420 LVPRMRVVKGTGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR 479
Query: 305 ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT 347
RFSFTDAMEMYTENTWVSVFSLSVVCAFIILS+T +NT PGT
Sbjct: 480 TRFSFTDAMEMYTENTWVSVFSLSVVCAFIILSTT-NNTLPGT 521
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464672|ref|XP_004150053.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 286/343 (83%), Positives = 310/343 (90%), Gaps = 3/343 (0%)
Query: 6 DEHWSCTCRWFSVV-STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGM 64
+EH S R + STRGLGKALAREFLLSGDRVVVASRSSESV+ T+ ELEENLK G+
Sbjct: 181 EEHCSAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVQETLRELEENLK-GL 239
Query: 65 MAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL 124
M GSS K+L HAKV G C+VC+P DV KL+NF +NE GSIDIWINNAGTNKGF+PLL
Sbjct: 240 MVRSGSSNKSLAHAKVVGTTCNVCDPEDVHKLANFTLNELGSIDIWINNAGTNKGFRPLL 299
Query: 125 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 184
QFT+E+I QI+STNLVGS+LCTREAMRVMR+Q KGG IFNMDGAGSGGSSTPLTAVYGST
Sbjct: 300 QFTDEDITQILSTNLVGSLLCTREAMRVMRNQAKGGQIFNMDGAGSGGSSTPLTAVYGST 359
Query: 185 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244
KCGLRQLQ+SL KE +RS VGVHTASPGMVLTDLLLSGST++NKQMFNIICELPETVART
Sbjct: 360 KCGLRQLQSSLLKECRRSNVGVHTASPGMVLTDLLLSGSTVRNKQMFNIICELPETVART 419
Query: 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR 304
LVPR+RVVKG+GKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR
Sbjct: 420 LVPRMRVVKGTGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR 479
Query: 305 ARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT 347
RFSFTDAMEMYTENTWVSVFSLSVVCAFIILS+T +NT PGT
Sbjct: 480 TRFSFTDAMEMYTENTWVSVFSLSVVCAFIILSTT-NNTLPGT 521
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531269|ref|XP_003534200.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/328 (85%), Positives = 303/328 (92%), Gaps = 1/328 (0%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGDRV+V SRS ESV+ T+ ELEENLKEG+ A GSS L AK
Sbjct: 189 STRGLGKALAREFLLSGDRVIVTSRSPESVQDTIKELEENLKEGIANAVGSSLTKLSQAK 248
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V GI+CDVCEP DVQ+L+NFAV E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNL
Sbjct: 249 VIGISCDVCEPHDVQRLANFAVKELGHIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNL 308
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
VGSILCTREA+R+MR+Q GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE
Sbjct: 309 VGSILCTREAVRIMRNQANAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKEC 368
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
KRSKVGVHTASPGMVLTDLLLSGST+QN+QMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 369 KRSKVGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELPETVARTLVPRMRVVKGTGKAI 428
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRILLAL+TAWLR+GRWFDDQGRALYAAEADR+RNWAE+RARFSFTDAMEMYTEN
Sbjct: 429 NYLTPPRILLALITAWLRQGRWFDDQGRALYAAEADRLRNWAEDRARFSFTDAMEMYTEN 488
Query: 320 TWVSVFSLSVVCAFIILSSTGSNTFPGT 347
TW+SVFSLSVVCAFIILSSTGSN PGT
Sbjct: 489 TWLSVFSLSVVCAFIILSSTGSN-LPGT 515
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357500769|ref|XP_003620673.1| Oxidoreductase [Medicago truncatula] gi|355495688|gb|AES76891.1| Oxidoreductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/328 (85%), Positives = 300/328 (91%), Gaps = 1/328 (0%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGDRV+V SRS ESV+ TV ELEENLKEG+ A GSS L AK
Sbjct: 188 STRGLGKALAREFLLSGDRVIVTSRSPESVQATVKELEENLKEGIANAVGSSLTKLSQAK 247
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V GIACDVCE DVQ+L+NFAV+E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNL
Sbjct: 248 VVGIACDVCEANDVQRLANFAVSELGYIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNL 307
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
VGSILCTREAMR+MR+Q K GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ SL E
Sbjct: 308 VGSILCTREAMRIMRNQTKPGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSLLTEC 367
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
KRSKVGVHTASPGMVLT+LLLSGSTIQNKQMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 368 KRSKVGVHTASPGMVLTELLLSGSTIQNKQMFNIICELPETVARTLVPRMRVVKGTGKAI 427
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRILLALVTAWLRRGRWFDD+GRALY+AEADR+RNWAENRARFSFTDAMEMYTEN
Sbjct: 428 NYLTPPRILLALVTAWLRRGRWFDDEGRALYSAEADRLRNWAENRARFSFTDAMEMYTEN 487
Query: 320 TWVSVFSLSVVCAFIILSSTGSNTFPGT 347
TW+SVFSLSVVCAFIILSST SN PGT
Sbjct: 488 TWLSVFSLSVVCAFIILSSTSSN-LPGT 514
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197253299|gb|ACH54085.1| putative chlorophyll b reductase [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/322 (84%), Positives = 299/322 (92%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGDRVVV SRS ESV +T+ ELEENLK+ + AA GS++K L HAK
Sbjct: 184 STRGLGKALAREFLLSGDRVVVTSRSPESVDLTIKELEENLKQAVNAATGSARKKLAHAK 243
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V G+ACDV EP DV+KL FA +E G IDIW+NNAGTNKGF+PLLQFTN++I++IVSTNL
Sbjct: 244 VVGMACDVSEPLDVRKLGKFAADELGYIDIWVNNAGTNKGFRPLLQFTNDDIQEIVSTNL 303
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+GSILCT+EA+++MR Q KGGH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ+SL KE
Sbjct: 304 IGSILCTKEAIQIMRTQSKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQSSLQKEC 363
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
KRSKVGVHTASPGMVLTDLLLSGSTIQN+QMFNIICE PETVARTLVPR+RVVKGSG+AI
Sbjct: 364 KRSKVGVHTASPGMVLTDLLLSGSTIQNRQMFNIICEHPETVARTLVPRMRVVKGSGRAI 423
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRIL+ALVTAWLRRGRWFDDQGRALYAAEADR+RNWAENR RFSFTDAMEMYTEN
Sbjct: 424 NYLTPPRILIALVTAWLRRGRWFDDQGRALYAAEADRLRNWAENRTRFSFTDAMEMYTEN 483
Query: 320 TWVSVFSLSVVCAFIILSSTGS 341
TW+SVFSLSVVCAFIILSSTGS
Sbjct: 484 TWISVFSLSVVCAFIILSSTGS 505
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357128420|ref|XP_003565871.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/328 (82%), Positives = 301/328 (91%), Gaps = 1/328 (0%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGDRVVVASRS +SV T++ELEEN++EG+ A ++ L+ AK
Sbjct: 170 STRGLGKALAREFLLSGDRVVVASRSPQSVLQTISELEENIQEGLSVAKKKQREALLQAK 229
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V G +CDVC+P DV+KL NFAV+E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNL
Sbjct: 230 VVGTSCDVCKPEDVKKLVNFAVDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNL 289
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
VGS+LCTREAM VM++Q KGGH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQ QASL ES
Sbjct: 290 VGSLLCTREAMDVMQNQEKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLMTES 349
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
KRSKVGVHTASPGMVLTDLLLSGS++QNKQMFNIICELPETVARTLVPR+RVVKGSGKAI
Sbjct: 350 KRSKVGVHTASPGMVLTDLLLSGSSLQNKQMFNIICELPETVARTLVPRMRVVKGSGKAI 409
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRILLALVTAW+RRGRWFD++GRA+YAAEADRIRNWAE+R RFSFTDAMEMYTEN
Sbjct: 410 NYLTPPRILLALVTAWVRRGRWFDEEGRAVYAAEADRIRNWAESRTRFSFTDAMEMYTEN 469
Query: 320 TWVSVFSLSVVCAFIILSSTGSNTFPGT 347
TWVSVFSLSVVCAFIILSS+G FPGT
Sbjct: 470 TWVSVFSLSVVCAFIILSSSG-GPFPGT 496
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 347 | ||||||
| UNIPROTKB|Q5N800 | 504 | NYC1 "Probable chlorophyll(ide | 0.942 | 0.648 | 0.786 | 1.3e-137 | |
| TAIR|locus:2119330 | 496 | NYC1 "NON-YELLOW COLORING 1" [ | 0.945 | 0.661 | 0.786 | 5.2e-136 | |
| UNIPROTKB|Q84ST4 | 343 | NOL "Chlorophyll(ide) b reduct | 0.628 | 0.635 | 0.432 | 6.6e-42 | |
| TAIR|locus:2175254 | 348 | NOL "NYC1-like" [Arabidopsis t | 0.634 | 0.632 | 0.432 | 7.5e-41 | |
| TIGR_CMR|CHY_1306 | 249 | CHY_1306 "oxidoreductase, shor | 0.559 | 0.779 | 0.298 | 3.5e-14 | |
| TIGR_CMR|BA_1958 | 242 | BA_1958 "oxidoreductase, short | 0.550 | 0.789 | 0.306 | 2.2e-13 | |
| UNIPROTKB|Q8N4T8 | 237 | CBR4 "Carbonyl reductase famil | 0.438 | 0.641 | 0.339 | 3.6e-13 | |
| UNIPROTKB|F1RIX8 | 238 | CBR4 "Uncharacterized protein" | 0.386 | 0.563 | 0.323 | 3.6e-13 | |
| TIGR_CMR|DET_1277 | 247 | DET_1277 "3-oxoacyl-acyl carri | 0.412 | 0.578 | 0.287 | 1.6e-12 | |
| ZFIN|ZDB-GENE-040426-1796 | 237 | cbr4 "carbonyl reductase 4" [D | 0.426 | 0.624 | 0.309 | 2e-12 |
| UNIPROTKB|Q5N800 NYC1 "Probable chlorophyll(ide) b reductase NYC1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
Identities = 258/328 (78%), Positives = 289/328 (88%)
Query: 20 STRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGD T+ ELEEN++EG+ A ++ L+HAK
Sbjct: 178 STRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQREILLHAK 237
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V G +CDVC+P DV+KL NFA +E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNL
Sbjct: 238 VVGTSCDVCKPEDVKKLVNFAKDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNL 297
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
VGS+LCTREAM VM+ Q KGGH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQ QASL KES
Sbjct: 298 VGSLLCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLLKES 357
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
+RSKVGVHTASPGMVLTDLLLSGS+++NKQMFN+ICELPETVARTLVPR+RVVKGSGKAI
Sbjct: 358 RRSKVGVHTASPGMVLTDLLLSGSSLRNKQMFNLICELPETVARTLVPRMRVVKGSGKAI 417
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRILLALVTAW+RRGRWFD++GRA+YAAEADRIRNWAE+RARFSFTDAMEMYTEN
Sbjct: 418 NYLTPPRILLALVTAWVRRGRWFDEEGRAVYAAEADRIRNWAESRARFSFTDAMEMYTEN 477
Query: 320 TWVSVFSLSVVCAFIILSSTGSNTFPGT 347
TWVSVFSLSVVCAFIILSS+G PGT
Sbjct: 478 TWVSVFSLSVVCAFIILSSSGG-PLPGT 504
|
|
| TAIR|locus:2119330 NYC1 "NON-YELLOW COLORING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 258/328 (78%), Positives = 283/328 (86%)
Query: 20 STRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRGLGKALAREFLLSGD MTV ELE+NLKE M A S++K L AK
Sbjct: 169 STRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAK 228
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V GIACDVC+P DV+KLSNFAV E GSI+IWINNAGTNKGF+PLL+FT E+I QIVSTNL
Sbjct: 229 VVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNL 288
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+GSILCTR AM VM Q GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ S+ KES
Sbjct: 289 IGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKES 348
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
+++ VG+HTASPGMVLT+LLLSGS+I+NKQMFNIICELPETVARTLVPR+RVVKGSGKA+
Sbjct: 349 QKTNVGLHTASPGMVLTELLLSGSSIKNKQMFNIICELPETVARTLVPRMRVVKGSGKAV 408
Query: 260 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 319
NYLTPPRILLA+VT+WLRRGRWFDDQGRALYAAEADR+RNWAENR R S TDAMEMYTEN
Sbjct: 409 NYLTPPRILLAIVTSWLRRGRWFDDQGRALYAAEADRLRNWAENRTRLSLTDAMEMYTEN 468
Query: 320 TWVSVFSLSVVCAFIILSSTGSNTFPGT 347
TWVSVFSLSVVCAFIIL ST ++FPGT
Sbjct: 469 TWVSVFSLSVVCAFIILQSTTPSSFPGT 496
|
|
| UNIPROTKB|Q84ST4 NOL "Chlorophyll(ide) b reductase NOL, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 103/238 (43%), Positives = 142/238 (59%)
Query: 20 STRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST+G+G ALA+EFL +GD VT+L KK
Sbjct: 81 STKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDL---------------KKEFGEQH 125
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTN 138
V GI CDV E DV+ L +FA ++ IDIWINNAG+N +KPL++ ++E + ++++TN
Sbjct: 126 VWGIVCDVREGKDVKALVDFARDKMKYIDIWINNAGSNAYSYKPLVETSDEALMEVITTN 185
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+G ++C REA+ +MR+QP+GGHIFN+DGAGS G TP A YG+TK + L SL E
Sbjct: 186 TLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAE 245
Query: 199 SKRSKVG---VHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLVPRIRVV 252
+ ++V VH SPGMV TDLL+SG+T + + F NI+ E VA LVP IR +
Sbjct: 246 LQMNEVNNVMVHNLSPGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLVPNIRAI 303
|
|
| TAIR|locus:2175254 NOL "NYC1-like" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 105/243 (43%), Positives = 139/243 (57%)
Query: 20 STRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST+G+G ALAREFL +GD V L+E E H
Sbjct: 87 STKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE--------------H-- 130
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTN 138
V G CDV E DV++L ++ IDIWINNAG+N FKPL + ++E++ ++V TN
Sbjct: 131 VWGTKCDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTN 190
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL----RQLQAS 194
+G +LC REAM +M Q +GGHIFN+DGAGS G TP A YG+TK + + LQA
Sbjct: 191 TLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAE 250
Query: 195 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLVPRIRVVK 253
L + ++ V VH SPGMV TDLL+SG+T + + F N++ E E VA LVP IR +
Sbjct: 251 LQMQDVKNVV-VHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIP 309
Query: 254 GSG 256
SG
Sbjct: 310 ASG 312
|
|
| TIGR_CMR|CHY_1306 CHY_1306 "oxidoreductase, short chain dehydrogenase/reductase family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 186 (70.5 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 62/208 (29%), Positives = 101/208 (48%)
Query: 59 NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 118
N +EG AA +K L +V I CDV + AD++KL + +G IDI +N AG N
Sbjct: 39 NKEEGEKAALQLREKGL---EVYSIPCDVGKVADIKKLVSEVYGRYGRIDILVNCAGVNV 95
Query: 119 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT 178
KP+ ++T E+ +V NL G+ EA + M Q K G I N+ P
Sbjct: 96 R-KPIEEYTEEDWNYMVDINLKGTFFACIEAGKHMIAQ-KEGVIVNLASI-QAEEVLPER 152
Query: 179 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 238
+Y +TK G++QL +L E + + V+ SP + T+++ +Q+ N+I
Sbjct: 153 GIYATTKGGVKQLTKALAVEWAKYNIRVNAVSPAFIKTEMV--EKVLQDPYWGNLI---- 206
Query: 239 ETVARTLVPRIRVVKGSGKAINYLTPPR 266
+ +T + R + +AI +L P+
Sbjct: 207 --INKTPMRRPGTPEEVAEAILFLVSPK 232
|
|
| TIGR_CMR|BA_1958 BA_1958 "oxidoreductase, short-chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 179 (68.1 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 62/202 (30%), Positives = 94/202 (46%)
Query: 57 EENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT 116
EENLK A + V A +A DV +V N GSIDI INNAG
Sbjct: 44 EENLK----AVAKEVEAEGVKAVIA--TADVSSYEEVTTAIETLKNGLGSIDILINNAGI 97
Query: 117 NKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP 176
+K F L+ + E+I+ NL+G TR A+ M +Q + G I N+ +G P
Sbjct: 98 SK-FGKFLELDVADWEKIIQVNLMGVYYATRAALPSMIEQ-QSGDIINISST-AGQKGAP 154
Query: 177 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS-GSTIQNKQMFNIIC 235
+T+ Y ++K G+ L SL E ++ + V +P V TD+ + G T N
Sbjct: 155 VTSAYSASKFGVLGLTESLAMEVRKHNIRVTALTPSTVATDMAVDLGLTDGNPDKVMQAE 214
Query: 236 ELPE-TVARTLVPRIRVVKGSG 256
++ E VA+ + + +K +G
Sbjct: 215 DIAEFIVAQLKLNKRTFIKSAG 236
|
|
| UNIPROTKB|Q8N4T8 CBR4 "Carbonyl reductase family member 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 177 (67.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 56/165 (33%), Positives = 83/165 (50%)
Query: 56 LEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 115
+ NL EG AA G + H +CDV + DVQ G ++ +N AG
Sbjct: 32 IARNL-EGAKAAAGDLGGD--HL---AFSCDVAKEHDVQNTFEELEKHLGRVNFLVNAAG 85
Query: 116 TNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGS 173
N+ G L++ E++ + TNL+GS+L + AMR M Q +GG I N+ G G+
Sbjct: 86 INRDGL--LVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQ-QGGSIVNVGSIVGLKGN 142
Query: 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218
S +VY ++K GL +L KE R K+ V+ +PG V TD+
Sbjct: 143 SGQ--SVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDM 185
|
|
| UNIPROTKB|F1RIX8 CBR4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 177 (67.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 44/136 (32%), Positives = 73/136 (53%)
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
++CDV + DVQ G ++ +N AG N L++ + E++ + TNL+GS
Sbjct: 53 LSCDVAKEQDVQSTFEEIEKNLGPVNFLVNAAGINSRDNLLVRTSTEDMLCQLQTNLLGS 112
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+L + A++ M Q +GG I N+ G+ G P +VY ++K GL +L KE +
Sbjct: 113 MLTCKAAVKTMIKQ-QGGSIVNI-GSVVGLKGNPGQSVYSASKGGLVGFSRALAKEVAKK 170
Query: 203 KVGVHTASPGMVLTDL 218
K+ V+ +PG V TD+
Sbjct: 171 KIRVNVVAPGFVHTDM 186
|
|
| TIGR_CMR|DET_1277 DET_1277 "3-oxoacyl-acyl carrier protein reductase" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 169 (64.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + + V L A FG +DI +NNAG + + ++ + E+ + ++ TNL
Sbjct: 59 VQADVSQSSGVDALFKAAQEAFGGVDILVNNAGITRD-QLTMRLSEEDWDSVIQTNLKSV 117
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
LC++ A+R M + G I N+ G P A Y + K G+ SL KE
Sbjct: 118 FLCSKAALRQMLKN-RWGRIINLSSI-VGLKGNPGQANYAAAKAGILGFSCSLAKEVASR 175
Query: 203 KVGVHTASPGMVLTDLLLSGSTIQNK 228
+ V++ +PG + TD+ + S Q +
Sbjct: 176 NITVNSIAPGFIETDMTAALSEEQRQ 201
|
|
| ZFIN|ZDB-GENE-040426-1796 cbr4 "carbonyl reductase 4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 173 (66.0 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 47/152 (30%), Positives = 78/152 (51%)
Query: 67 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 126
A S+ ++L G++CDV + +VQK G++ +N AG N+ LL+
Sbjct: 38 AAQSTAQSLPGENHLGLSCDVSKEEEVQKAFETINKTCGTVGFLVNAAGINRDAL-LLRS 96
Query: 127 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 186
+E++ ++ TNL+GS+L + A+R M GG I N+ G+ G VY ++K
Sbjct: 97 KSEDMLSVLHTNLLGSMLTCKAAVRNMLSH--GGAIVNI-GSVVGVKGNAGQCVYSASKA 153
Query: 187 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218
GL SL KE + V+ +PG++ TD+
Sbjct: 154 GLEGFTRSLAKEVASRNIRVNLVAPGLIHTDM 185
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5N800 | NYC1_ORYSJ | 1, ., 1, ., 1, ., 2, 9, 4 | 0.7900 | 0.9827 | 0.6765 | yes | no |
| Q93ZA0 | NYC1_ARATH | 1, ., 1, ., 1, ., 2, 9, 4 | 0.8170 | 0.9452 | 0.6612 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | LOW CONFIDENCE prediction! |
| 4th Layer | 1.1.1.294 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 347 | |||
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 1e-46 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-32 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 2e-31 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 2e-29 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-27 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-26 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 3e-26 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 7e-25 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 7e-25 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 1e-24 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 1e-24 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 2e-24 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 4e-24 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-24 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 1e-23 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 5e-23 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 8e-23 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 2e-22 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 3e-22 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-22 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 9e-22 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 9e-22 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 1e-21 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 1e-20 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 1e-20 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 2e-20 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 2e-20 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-20 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 3e-20 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 3e-20 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 3e-20 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 4e-20 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 5e-20 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 6e-20 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 8e-20 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 8e-20 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 1e-19 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 1e-19 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 2e-19 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-19 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 5e-19 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 6e-19 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 1e-18 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 4e-18 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-18 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 5e-18 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 6e-18 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 6e-18 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 7e-18 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 1e-17 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 1e-17 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 1e-17 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 2e-17 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 3e-17 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 3e-17 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 5e-17 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 6e-17 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 7e-17 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 7e-17 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 8e-17 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 9e-17 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 2e-16 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 4e-16 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 5e-16 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 2e-15 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 2e-15 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 2e-15 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 3e-15 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 3e-15 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 4e-15 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 4e-15 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 5e-15 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 6e-15 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 1e-14 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 1e-14 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 1e-14 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 1e-14 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 2e-14 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-14 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 5e-14 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 6e-14 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 8e-14 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 9e-14 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 1e-13 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 1e-13 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 1e-13 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 1e-13 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 1e-13 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 2e-13 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 3e-13 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 4e-13 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 5e-13 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 6e-13 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 6e-13 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 7e-13 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 7e-13 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 8e-13 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 9e-13 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 1e-12 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 1e-12 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 2e-12 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 2e-12 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 3e-12 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 3e-12 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 4e-12 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 4e-12 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 5e-12 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 5e-12 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 7e-12 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 7e-12 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 8e-12 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 3e-11 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 3e-11 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 4e-11 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 4e-11 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 4e-11 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 9e-11 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 1e-10 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 1e-10 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 1e-10 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 2e-10 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 2e-10 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 2e-10 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 2e-10 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 3e-10 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 3e-10 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 3e-10 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 4e-10 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 4e-10 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 4e-10 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 5e-10 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 6e-10 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 8e-10 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 1e-09 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-09 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 1e-09 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 2e-09 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 2e-09 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 2e-09 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 2e-09 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 3e-09 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 3e-09 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 3e-09 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 4e-09 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 4e-09 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 5e-09 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 5e-09 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 7e-09 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 1e-08 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 1e-08 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 2e-08 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 2e-08 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 2e-08 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 3e-08 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 3e-08 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 5e-08 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 6e-08 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 7e-08 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 8e-08 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 8e-08 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 9e-08 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 1e-07 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 2e-07 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 2e-07 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 2e-07 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 3e-07 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 4e-07 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 4e-07 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 4e-07 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 4e-07 | |
| PRK07792 | 306 | PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-07 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 8e-07 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 9e-07 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 9e-07 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 1e-06 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 1e-06 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 1e-06 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 1e-06 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 2e-06 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 3e-06 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 3e-06 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 3e-06 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 3e-06 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 3e-06 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 4e-06 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 5e-06 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 5e-06 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-06 | |
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 7e-06 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 8e-06 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 8e-06 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 9e-06 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 1e-05 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 1e-05 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 1e-05 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 1e-05 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 2e-05 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 2e-05 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 3e-05 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 3e-05 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 3e-05 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 5e-05 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 5e-05 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 8e-05 | |
| PRK07023 | 243 | PRK07023, PRK07023, short chain dehydrogenase; Pro | 8e-05 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 9e-05 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 1e-04 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 2e-04 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 2e-04 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 3e-04 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 3e-04 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 3e-04 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 4e-04 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 4e-04 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 5e-04 | |
| cd05361 | 242 | cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de | 6e-04 | |
| cd08951 | 260 | cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 | 0.001 | |
| PRK08261 | 450 | PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.003 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 1e-46
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G+A+AR G +VV+A R+ E++ EL G
Sbjct: 6 ASSGIGRAIARRLAREGAKVVLADRNEEALA----ELAAIEALG--------------GN 47
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV + DV+ L A+ EFG +DI +NNAG PL + T+E+ ++++ NL
Sbjct: 48 AVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIA-RPGPLEELTDEDWDRVLDVNL 106
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G L TR A+ M+ Q GG I N+ P A Y ++K L L SL E
Sbjct: 107 TGVFLLTRAALPHMKKQ-GGGRIVNISSVAGLRPL-PGQAAYAASKAALEGLTRSLALEL 164
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-----NIICELPETVARTLV 246
+ V+ +PG+V T +L + ++ PE VA +V
Sbjct: 165 APYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVV 216
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 4e-32
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+ +AR F G RVVV R+ E+ E+ AGG +
Sbjct: 15 SGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL---------AGG---------RAI 56
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+A DV + ADV+ A+ FGS+DI +NNAGT PLL E ++I + N+
Sbjct: 57 AVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKS 116
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
L T+ A+ MR + GG I N+ G P Y ++K + L +L E
Sbjct: 117 PYLWTQAAVPAMRGE-GGGAIVNVASTA-GLRPRPGLGWYNASKGAVITLTKALAAELGP 174
Query: 202 SKVGVHTASPGMVLTDL---LLSGSTIQNKQMF 231
K+ V+ +P +V T L + T +N+ F
Sbjct: 175 DKIRVNAVAPVVVETGLLEAFMGEPTPENRAKF 207
|
Length = 251 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-31
Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 20/201 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G+A+AR G RVVVA+R SE E E L + AGG +
Sbjct: 13 ASSGIGRAIARALAREGARVVVAARRSEE------EAAEALAAAIKEAGG--------GR 58
Query: 80 VAGIACDV-CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
A +A DV + V+ L A EFG IDI +NNAG PL + T E+ ++++ N
Sbjct: 59 AAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVN 118
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L+G+ L TR A+ +M+ Q I N+ + +G P A Y ++K L L +L E
Sbjct: 119 LLGAFLLTRAALPLMKKQ----RIVNI-SSVAGLGGPPGQAAYAASKAALIGLTKALALE 173
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
+ V+ +PG + T +
Sbjct: 174 LAPRGIRVNAVAPGYIDTPMT 194
|
Length = 251 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 2e-29
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 28/267 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ G+G LA++ G +++ +R + L + L+ K V +V
Sbjct: 15 SSGIGAELAKQLARRGYNLILVARR----EDKLEALAKELE----------DKTGVEVEV 60
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I D+ +P +++L + G ID+ +NNAG F P L+ + +E E+++ N++
Sbjct: 61 --IPADLSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPFLELSLDEEEEMIQLNIL 117
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
T+ + M ++ GHI N+ G+ +G TP AVY +TK + +L +E K
Sbjct: 118 ALTRLTKAVLPGMVER-GAGHIINI-GSAAGLIPTPYMAVYSATKAFVLSFSEALREELK 175
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP------RIRVVKG 254
+ V V PG T+ + + + PE VA + R +
Sbjct: 176 GTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGKREIIPGL 235
Query: 255 SGKAIN---YLTPPRILLALVTAWLRR 278
KA+ L P + L ++
Sbjct: 236 PNKALALSFRLLPRSLREKLAGKIFKK 262
|
Length = 265 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 3e-27
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A G VV+ SSE+ E L + A GG K
Sbjct: 13 ASRGIGRAIAERLAAQGANVVINYASSEA-------GAEALVAEIGALGG---------K 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV + V++ + A EFG +DI +NNAG + L++ E+ ++++ TNL
Sbjct: 57 ALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRD-NLLMRMKEEDWDRVIDTNL 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G T+ R M Q + G I N+ + G P A Y ++K G+ SL +E
Sbjct: 116 TGVFNLTKAVARPMMKQ-RSGRIINI-SSVVGLMGNPGQANYAASKAGVIGFTKSLAREL 173
Query: 200 KRSKVGVHTASPGMVLTDLLLSGS 223
+ V+ +PG + TD+ +
Sbjct: 174 ASRGITVNAVAPGFIETDMTDALP 197
|
Length = 248 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-26
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+G+A+A G +VV+A + E+ + + E++E
Sbjct: 15 GGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-----------------GGDA 57
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ DV DV+ L V +FG IDI +NNAG + F + T+EE ++++ NL
Sbjct: 58 IAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLT 116
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G +L TR A+ M + K G I N+ G +Y ++K + +L KE
Sbjct: 117 GVMLLTRYALPYMIKR-KSGVIVNISSIW-GLIGASCEVLYSASKGAVNAFTKALAKELA 174
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 238
S + V+ +PG + T++ S+ + + E+P
Sbjct: 175 PSGIRVNAVAPGAIDTEM---WSSFSEEDKEGLAEEIP 209
|
Length = 247 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 3e-26
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G +A G +VV+A + E+ L++ AGG K
Sbjct: 12 AASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK--------AGG---------K 54
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G+A DV + + ++AV FG +DI +NNAG + P+ F E+ +++++ L
Sbjct: 55 AIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGI-QHVAPIEDFPTEKWKKMIAIML 113
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ L T+ A+ +M+ Q GG I NM + G + A Y S K GL L + E
Sbjct: 114 DGAFLTTKAALPIMKAQ-GGGRIINM-ASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEG 171
Query: 200 KRSKVGVHTASPGMVLTDL 218
V V+ PG V T L
Sbjct: 172 ATHGVTVNAICPGYVDTPL 190
|
Length = 258 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 7e-25
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+GKA+A +G VVV RS E E + E + A GG K V A
Sbjct: 11 ASSGIGKAIAIRLATAGANVVVNYRSKEDA-------AEEVVEEIKAVGG--KAIAVQA- 60
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
DV + DV L A+ EFG++DI +NNAG + T E+ +++ NL
Sbjct: 61 ------DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDA-SSHEMTLEDWNKVIDVNL 113
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKCGLRQLQA 193
G LC REA++ R G I NM SS P Y ++K G++ +
Sbjct: 114 TGQFLCAREAIKRFRKSKIKGKIINM-------SSVHEKIPWPGHVNYAASKGGVKMMTK 166
Query: 194 SLFKESKRSKVGVHTASPGMVLTDL 218
+L +E + V+ +PG + T +
Sbjct: 167 TLAQEYAPKGIRVNAIAPGAINTPI 191
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 7e-25
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 22/197 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A AR +G +VV+A+R E + L + + G
Sbjct: 17 GIGEATARALAEAGAKVVLAARREE----RLEALADEIGAG---------------AALA 57
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+A DV + A V+ EFG IDI +NNAG G PL + ++ ++++ TN+ G
Sbjct: 58 LALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG-DPLDEADLDDWDRMIDTNVKGL 116
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+ TR + M ++ K GHI N+ G+ +G P AVYG+TK +R L +E +
Sbjct: 117 LNGTRAVLPGMVER-KSGHIINL-GSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGT 174
Query: 203 KVGVHTASPGMVLTDLL 219
+ V SPG+V T
Sbjct: 175 GIRVTVISPGLVETTEF 191
|
Length = 246 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-24
Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 28/198 (14%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
TRG+G +AR FL +G VVV R G
Sbjct: 15 TRGIGAGIARAFLAAGATVVVCGRR----------------APETVDG---------RPA 49
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
A DV +P V L + V G +D+ +NNAG + + + + E+IV NL+
Sbjct: 50 EFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSP-YALAAEASPRFHEKIVELNLL 108
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+L + A VM+ QP GG I N+ G+ SG +P TA YG+ K GL L SL E
Sbjct: 109 APLLVAQAANAVMQQQPGGGSIVNI-GSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWA 167
Query: 201 RSKVGVHTASPGMVLTDL 218
KV V+ G+V T+
Sbjct: 168 -PKVRVNAVVVGLVRTEQ 184
|
Length = 252 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 99 bits (250), Expect = 1e-24
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G ALA G RV+ +R+ + + E + + +
Sbjct: 11 GIGLALALALAAQGYRVIATARNPDKL------------ESLGELLNDN--------LEV 50
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + ++ + FG ID+ +NNAG F PL + + EE+ ++ N+ G
Sbjct: 51 LELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYG-LFGPLEETSIEEVRELFEVNVFGP 109
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+ TR + +MR Q G I N+ + +G TP Y ++K L L SL E
Sbjct: 110 LRVTRAFLPLMRKQ-GSGRIVNV-SSVAGLVPTPFLGPYCASKAALEALSESLRLELAPF 167
Query: 203 KVGVHTASPGMVLTDLL 219
+ V PG V T
Sbjct: 168 GIKVTIIEPGPVRTGFA 184
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 99.7 bits (249), Expect = 2e-24
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
++RG+G+A+A+ G VVV + S + V E+E AAGG
Sbjct: 11 ASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIE--------AAGG--------- 53
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
K + DV +P+ V +L + A FG +DI +NNAG KP+ + + EE +++ + N
Sbjct: 54 KAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVML-KKPIAETSEEEFDRMFTVN 112
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G+ +EA + +RD GG I N+ + + TP Y +K + L KE
Sbjct: 113 TKGAFFVLQEAAKRLRD---GGRIINI-SSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKE 168
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGST 224
+ V+ +PG V TD+ +G T
Sbjct: 169 LGGRGITVNAVAPGPVDTDMFYAGKT 194
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 4e-24
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 27/246 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RG+GKA+A G VV+ R S+ + + + GG K
Sbjct: 6 GSRGIGKAIALRLAERGADVVINYRKSK-------DAAAEVAAEIEELGG---------K 49
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV +P DV+++ FG +D+ ++NA F+PL + T + ++TNL
Sbjct: 50 AVVVRADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAG-AFRPLSELTPAHWDAKMNTNL 108
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ C ++A ++MR++ GG I + GS + AV G+ K L L L E
Sbjct: 109 KALVHCAQQAAKLMRER-GGGRIVAISSLGSIRALPNYLAV-GTAKAALEALVRYLAVEL 166
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 259
+ V+ SPG++ TD L N L A T R+ + A+
Sbjct: 167 GPRGIRVNAVSPGVIDTDAL--------AHFPNREDLLEAAAANTPAGRVGTPQDVADAV 218
Query: 260 NYLTPP 265
+L
Sbjct: 219 GFLCSD 224
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 98.3 bits (246), Expect = 6e-24
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A G +VV+ + E+ EL AAGG +
Sbjct: 13 ASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELR--------AAGG---------E 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV + A V+ L AV FG++DI +NNAG L + + E+ ++++ NL
Sbjct: 56 ARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGIT-RDALLPRMSEEDWDRVIDVNL 114
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ R A+ M + G I N+ + SG + P Y + K G+ +L E
Sbjct: 115 TGTFNVVRAALPPMIKA-RYGRIVNI-SSVSGVTGNPGQTNYSAAKAGVIGFTKALALEL 172
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 234
+ V+ +PG + TD+ ++ I
Sbjct: 173 ASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEI 207
|
Length = 246 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 1e-23
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+G+A+A F +G RV V S ++ T L AKV
Sbjct: 20 ASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-------------------AKV 60
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
DV +PA V+++ + AV FG +D+ +NNAG + + T E+ EQ ++ NL
Sbjct: 61 TATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLN 120
Query: 141 GSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G R A+ +++ GG I + AG G P Y ++K + L SL E
Sbjct: 121 GQFYFARAAVPLLKASGHGGVIIALSSVAGRLG--YPGRTPYAASKWAVVGLVKSLAIEL 178
Query: 200 KRSKVGVHTASPGMV 214
+ V+ PG+V
Sbjct: 179 GPLGIRVNAILPGIV 193
|
Length = 264 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 5e-23
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A + G +V++ RSSE E E + E + A G K
Sbjct: 6 ASRGIGRAIALKLAKEGAKVIITYRSSE-------EGAEEVVEELKAYGV---------K 49
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
G+ CDV + DV+ + E G IDI +NNAG T L++ E+ + ++ TN
Sbjct: 50 ALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNL--LMRMKEEDWDAVIDTN 107
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L G T+ +R+M Q + G I N+ + G A Y ++K G+ SL KE
Sbjct: 108 LTGVFNLTQAVLRIMIKQ-RSGRIINI-SSVVGLMGNAGQANYAASKAGVIGFTKSLAKE 165
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 230
+ V+ +PG + TD+ S K++
Sbjct: 166 LASRNITVNAVAPGFIDTDMTDKLSEKVKKKI 197
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 95.2 bits (237), Expect = 8e-23
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A A G RVVVA + + V ++ AGG+
Sbjct: 14 GIGAACAARLAREGARVVVADIDGGAAQAVVAQI----------AGGA----------LA 53
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + V L AV EFG +D+ +NNAG ++ +Q ++ NL G+
Sbjct: 54 LRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGT 113
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
LC R A M + GG I N+ + +G S P YG++K +R L +L E + +
Sbjct: 114 FLCCRHAAPRMIAR-GGGSIVNLS-SIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHA 171
Query: 203 KVGVHTASPGMVLTDLLLS 221
+ + +PG++ T LLL+
Sbjct: 172 GIRCNALAPGLIDTPLLLA 190
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 2e-22
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 22/200 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A G +V V RS E+ TV E++ A GG
Sbjct: 8 ASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIK--------ALGG---------N 50
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
A + DV + V+ L EFG +DI +NNAG T L++ + E+ + +++ N
Sbjct: 51 AAALEADVSDREAVEALVEKVEAEFGPVDILVNNAGITRDNL--LMRMSEEDWDAVINVN 108
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L G T+ +R M + + G I N+ + G P A Y ++K G+ SL KE
Sbjct: 109 LTGVFNVTQAVIRAMIKR-RSGRIINI-SSVVGLIGNPGQANYAASKAGVIGFTKSLAKE 166
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ V+ +PG + TD+
Sbjct: 167 LASRGITVNAVAPGFIDTDM 186
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 93.5 bits (233), Expect = 3e-22
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 36/241 (14%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
++G+G A+A L G +V + +R + + EL V
Sbjct: 15 SKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN------------------KGNV 56
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
G+A DV + ADVQ+ + V FG +D+ I NAG F P+ + T EE ++ TNL
Sbjct: 57 LGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLT 115
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKE 198
G+ + A+ ++ GG+I N+ S + A Y ++K GL + +
Sbjct: 116 GAFYTIKAAVPALKRG--GGYIINI---SSLAGTNFFAGGAAYNASKFGLVGFSEAAMLD 170
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGST--------IQNKQMFNIICELPETVARTLVPRIR 250
++ + V T PG V T +G T IQ + + ++ +L + RTL +I
Sbjct: 171 LRQYGIKVSTIMPGSVATH--FNGHTPSEKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIE 228
Query: 251 V 251
V
Sbjct: 229 V 229
|
Length = 237 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 7e-22
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+ RGLG+A+A +G VVV RS E V +E
Sbjct: 14 AARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-----------------GR 56
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ + DV + A ++ AV FG IDI +NNAG + KPL +++E ++++ N
Sbjct: 57 RAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED-KPLADMSDDEWDEVIDVN 115
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L G R + MR Q +GG I N+ + +G P + Y + K GL L +L +E
Sbjct: 116 LSGVFHLLRAVVPPMRKQ-RGGRIVNI-SSVAGLPGWPGRSNYAAAKAGLVGLTKALARE 173
Query: 199 SKRSKVGVHTASPGMVLTD 217
+ V+ +PG + TD
Sbjct: 174 LAEYGITVNMVAPGDIDTD 192
|
Length = 249 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 92.4 bits (230), Expect = 9e-22
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 27/202 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G A+AR +G V + S+ EE +E +KK V K
Sbjct: 18 RGIGLAIARALAEAGADVAIIYNSAP-------RAEEKAEE-------LAKKYGVKTKA- 62
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
CDV V+K +FG IDI I NAG KP L +T E+ +++ NL G
Sbjct: 63 -YKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVH-KPALDYTYEQWNKVIDVNLNG 120
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST----PLT-AVYGSTKCGLRQLQASLF 196
C + A ++ + Q KG I + S T P A Y ++K + L SL
Sbjct: 121 VFNCAQAAAKIFKKQGKGSLIIT-----ASMSGTIVNRPQPQAAYNASKAAVIHLAKSLA 175
Query: 197 KESKRSKVGVHTASPGMVLTDL 218
E + + V++ SPG + TDL
Sbjct: 176 VEWAKYFIRVNSISPGYIDTDL 197
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 91.9 bits (229), Expect = 9e-22
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+GKALA+E + G V++ +RS + V E+E ++ N KV+
Sbjct: 12 GIGKALAKELVKEGANVIIVARSESKLEEAVEEIE-------------AEANASGQKVSY 58
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
I+ D+ + +V++ AV + G D+ +N AG + T EE E+ + N GS
Sbjct: 59 ISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISI-PGLFEDLTAEEFERGMDVNYFGS 117
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKESK 200
+ + +M++Q + GHI + S + + + Y +K LR L SL +E K
Sbjct: 118 LNVAHAVLPLMKEQ-RPGHIVFV---SSQAALVGIYGYSAYCPSKFALRGLAESLRQELK 173
Query: 201 RSKVGVHTASPGMVLT 216
+ V P T
Sbjct: 174 PYNIRVSVVYPPDTDT 189
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 1e-21
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T+G+G A+ E G V +R+ + EL+E L E +K KV
Sbjct: 15 TKGIGYAIVEELAGLGAEVYTCARNQK-------ELDECLTE-------WREKGF---KV 57
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G CDV ++ Q+L + + FG ++I +NNAGTN K +T E+ I+STN
Sbjct: 58 EGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNI-RKEAKDYTEEDYSLIMSTNF 116
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ +R A +++ G +F + +G + P A YG+TK L QL SL E
Sbjct: 117 EAAYHLSRLAHPLLKASGNGNIVFI--SSVAGVIAVPSGAPYGATKGALNQLTRSLACEW 174
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE 236
+ + V+ +P ++ T L+ IQ K+ + + E
Sbjct: 175 AKDNIRVNAVAPWVIATPLV--EPVIQQKENLDKVIE 209
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 1e-20
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 24/169 (14%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A AR F G +VV+ +R E + E+ AAGG +
Sbjct: 19 GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR--------AAGG---------EALA 61
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + VQ ++ A E G ID W+NNA F P T EE ++ +G
Sbjct: 62 VVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGV 120
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGS--STPLTAVYGSTKCGLR 189
+ T A+R MR + G I + GS + S PL + Y + K +R
Sbjct: 121 VHGTLAALRHMRPR-DRGAIIQV---GSALAYRSIPLQSAYCAAKHAIR 165
|
Length = 334 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 1e-20
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A F G +VV+A+RS+E++ E+ E GG +
Sbjct: 11 GIGRATALAFAERGAKVVLAARSAEALHELAREVRE--------LGG---------EAIA 53
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + A V++ ++ AV FG ID W+NNAG F T EE ++ N +G
Sbjct: 54 VVADVADAAQVERAADTAVERFGRIDTWVNNAGVAV-FGRFEDVTPEEFRRVFDVNYLGH 112
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+ T A+ +R + GG + N+ G+ G S PL A Y ++K +R SL E
Sbjct: 113 VYGTLAALPHLRRR-GGGALINV-GSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHD 170
Query: 203 KVGVH 207
+
Sbjct: 171 GAPIS 175
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 2e-20
Identities = 64/240 (26%), Positives = 100/240 (41%), Gaps = 37/240 (15%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G+A AR G RV + +R + + E V
Sbjct: 9 SRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG--------------------V 48
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
G+A DV + ADV++ + FG +D +NNAG KP+ + T EE ++ TNL
Sbjct: 49 LGLAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGV-MKPVEELTPEEWRLVLDTNLT 107
Query: 141 GSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFK 197
G+ C +A ++R GG I N+ GS A Y ++K GL L +
Sbjct: 108 GAFYCIHKAAPALLRRG--GGTIVNV---GSLAGKNAFKGGAAYNASKFGLLGLSEAAML 162
Query: 198 ESKRSKVGVHTASPGMVLTDLLLSGST------IQNKQMFNIICELPETVARTLVPRIRV 251
+ + + + V PG V T +GS + + + + E AR LV RI +
Sbjct: 163 DLREANIRVVNVMPGSVDTG--FAGSPEGQAWKLAPEDVAQAVLFALEMPARALVSRIEL 220
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 2e-20
Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 30/206 (14%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RGLG A A +G V + R LE AAGG +
Sbjct: 17 RGLGAAFAEALAEAGATVAFNDGLAAEARELAAALE--------AAGG---------RAH 59
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
IA D+ +PA VQ+ + A G +D +NNAG K + + + +++ N+ G
Sbjct: 60 AIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRG 118
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL-----TAVYGSTKCGLRQLQASLF 196
+ L R A+ +RD G I N+ S T L Y ++K + + SL
Sbjct: 119 TFLMLRAALPHLRDSG-RGRIVNL------ASDTALWGAPKLGAYVASKGAVIGMTRSLA 171
Query: 197 KESKRSKVGVHTASPGMVLTDLLLSG 222
+E + V+ +PG+ T+
Sbjct: 172 RELGGRGITVNAIAPGLTATEATAYV 197
|
Length = 250 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 2e-20
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 43/258 (16%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G+A+A G V + +R+ E+++ E+E KV
Sbjct: 17 RGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-----------------YGVKVV 59
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + +V NE GSIDI INNAG +K F L+ E E+I+ NL+G
Sbjct: 60 IATADVSDYEEVTAAIEQLKNELGSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMG 118
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
TR + M ++ + G I N+ AG G +T+ Y ++K G+ L SL +E +
Sbjct: 119 VYYATRAVLPSMIER-QSGDIINISSTAGQKG--AAVTSAYSASKFGVLGLTESLMQEVR 175
Query: 201 RSKVGVHTASPGMVLTDLLLS-GSTIQN--KQMFNIICELPETVARTLVPRIRVVKGSGK 257
+ + V +P V TD+ + G T N K M PE +A +V ++++
Sbjct: 176 KHNIRVTALTPSTVATDMAVDLGLTDGNPDKVM------QPEDLAEFIVAQLKL------ 223
Query: 258 AINYLTPPRILLALVTAW 275
R + W
Sbjct: 224 ------NKRTFIKSAGLW 235
|
Length = 239 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 3e-20
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G+A+A G +V+A + E + + E AG ++ A A
Sbjct: 12 QGIGRAIAERLAADGFNIVLADLNLEE---AAKSTIQEISE----AGYNA-----VAVGA 59
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + DV+ L + AV +FGS D+ +NNAG PLL T E+++++ + N+ G
Sbjct: 60 ----DVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAP-ITPLLTITEEDLKKVYAVNVFG 114
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ + A R + GG I N + +G P Y ++K +R L + +E
Sbjct: 115 VLFGIQAAARQFKKLGHGGKIINA-SSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAP 173
Query: 202 SKVGVHTASPGMVLT 216
+ V+ +PG+V T
Sbjct: 174 KGITVNAYAPGIVKT 188
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 3e-20
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 22/228 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+A AR F G RVV+A ++++ AG + L ++
Sbjct: 14 SGIGEATARLFAKHGARVVIA------------DIDD-------DAGQAVAAELGDPDIS 54
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP-LLQFTNEEIEQIVSTNLV 140
+ CDV ADV+ + AV FG +DI NNAG +L+ + EE E+++ N+
Sbjct: 55 FVHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVY 114
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+ L T+ A RVM KG + AG G P Y ++K + L S E
Sbjct: 115 GAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGP--HAYTASKHAVLGLTRSAATELG 172
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248
+ V+ SP V T LL +G ++++ + + L P
Sbjct: 173 EHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPE 220
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 3e-20
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A AR L G RVV++ + T EL L G +V
Sbjct: 29 GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLG---------------RVEA 73
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ CDV A V L + AV G +D+ +NNAG G P++ T++E +++ L G+
Sbjct: 74 VVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLG-GQTPVVDMTDDEWSRVLDVTLTGT 132
Query: 143 ILCTREAMRVMRDQPKGGHIFNM 165
TR A+R MR + GG I N
Sbjct: 133 FRATRAALRYMRARGHGGVIVNN 155
|
Length = 262 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 4e-20
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 22/199 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ G+G+A AR F +G ++++ R +E ++ EL KV
Sbjct: 9 SSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFP----------------VKV 52
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ DV + ++ EF IDI +NNAG G P + E+ E ++ TN+
Sbjct: 53 LPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVK 112
Query: 141 GSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G + TR + +M R+Q GHI N+ G+ +G VY +TK +RQ +L K+
Sbjct: 113 GLLNVTRLILPIMIARNQ---GHIINL-GSIAGRYPYAGGNVYCATKAAVRQFSLNLRKD 168
Query: 199 SKRSKVGVHTASPGMVLTD 217
+ + V PG+V T+
Sbjct: 169 LIGTGIRVTNIEPGLVETE 187
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 5e-20
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74
WF ++RG G+A L GDRVV +R + T+ +L E +
Sbjct: 6 WFITGASRGFGRAWTEAALERGDRVVATARDTA----TLADLAEKYGD------------ 49
Query: 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 134
++ +A DV + A V AV FG +DI +NNAG F + + T E
Sbjct: 50 ----RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGL-FGMIEEVTESEARAQ 104
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 194
+ TN G++ T+ + +R+Q + GHI + G G S+ P++ +Y ++K L + +
Sbjct: 105 IDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSIG-GISAFPMSGIYHASKWALEGMSEA 162
Query: 195 LFKESKRSKVGVHTASPGMVLTDLLLSGSTI 225
L +E + V PG TD + +
Sbjct: 163 LAQEVAEFGIKVTLVEPGGYSTDWAGTSAKR 193
|
Length = 275 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 6e-20
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 20/199 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G A+AR +G VVV E + AGGS
Sbjct: 9 AASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGD--------AGGS--------- 51
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V + DV + ++ + A EFG +DI +NNAG P+ +F E+ ++I++ L
Sbjct: 52 VIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQH-VAPIEEFPPEDWDRIIAVML 110
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ R A+ M+ Q G I N+ + G ++P + Y + K GL L L E
Sbjct: 111 TSAFHTIRAALPHMKKQ-GWGRIINI-ASAHGLVASPFKSAYVAAKHGLIGLTKVLALEV 168
Query: 200 KRSKVGVHTASPGMVLTDL 218
+ V+ PG V T L
Sbjct: 169 AEHGITVNAICPGYVRTPL 187
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 8e-20
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 38/200 (19%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+GKA+A+ F G V +A R E + E+ +A G +
Sbjct: 14 GIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEIS--------SATG--------GRAHP 57
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN----------KGFKPLLQFTNEEIE 132
I CDV +P V+ + + EFG IDI INNA N GFK
Sbjct: 58 IQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFK----------- 106
Query: 133 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 192
++ +L G+ T+ + + + GG I N+ A + +P + K G+ L
Sbjct: 107 TVIDIDLNGTFNTTKAVGKRLIEAKHGGSILNI-SATYAYTGSPFQVHSAAAKAGVDALT 165
Query: 193 ASLFKESKRSKVGVHTASPG 212
SL E + V+ +PG
Sbjct: 166 RSLAVEWGPYGIRVNAIAPG 185
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 8e-20
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 21/200 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RG+G+A+A G V+V + T +E AAGG K
Sbjct: 15 ARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE--------AAGG---------KA 57
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTNL 139
DV + A ++ V +FG +DI + NAG P + +E+ E+++ NL
Sbjct: 58 RARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLT--PFAEMDDEQWERVIDVNL 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ L T+ A+ + GG I P A Y ++K GL +L E
Sbjct: 116 TGTFLLTQAALPALIRA-GGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALEL 174
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ V++ PG V T +
Sbjct: 175 AARNITVNSVHPGGVDTPMA 194
|
Length = 251 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 1e-19
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+A + F +GD+VVVA R+ E R E ++L A
Sbjct: 15 GGIGRAACQRFARAGDQVVVADRNVERAR----ERADSLGPDHHA--------------- 55
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTNLV 140
+A DV + A +++ EFG ID+ +NNAG T+ L T EE ++ + NL
Sbjct: 56 -LAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLT 114
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+ L REA+R+M +Q G I N+ +G+G + P Y ++K + L SL E
Sbjct: 115 GAYLVAREALRLMIEQGHGAAIVNV-ASGAGLVALPKRTAYSASKAAVISLTRSLACEWA 173
Query: 201 RSKVGVHTASPGMVLTDLLL 220
+ V+ PG V T ++
Sbjct: 174 AKGIRVNAVLPGYVRTQMVA 193
|
Length = 520 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.2 bits (213), Expect = 1e-19
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+GK +A ++ +G +V +A+R +++ E+ G K
Sbjct: 17 ASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI---------GTSG--------GK 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V + CDV + V + + E G IDI + NAG P+L EE +++ +TN+
Sbjct: 60 VVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGI-ITVTPMLDMPLEEFQRLQNTNV 118
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKE 198
G L + A + M Q +GG I N + P + Y ++K + L ++ E
Sbjct: 119 TGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVE 178
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
K+ V++ SPG +LT+L+
Sbjct: 179 LAPHKIRVNSVSPGYILTELV 199
|
Length = 253 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 2e-19
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 32/204 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ GLG+A+A F +VV+ RS E E ++ E + AGG + V
Sbjct: 15 GSTGLGRAMAVRFGKEKAKVVINYRSDE-------EEANDVAEEIKKAGGEAIA--VKG- 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTN 138
DV +DV L AV EFG++D+ INNAG N P + + E+ ++++TN
Sbjct: 65 ------DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENA--VPSHEMSLEDWNKVINTN 116
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKCGLRQLQ 192
L G+ L +REA++ + G+I NM SS PL Y ++K G++ +
Sbjct: 117 LTGAFLGSREAIKYFVEHDIKGNIINM-------SSVHEQIPWPLFVHYAASKGGVKLMT 169
Query: 193 ASLFKESKRSKVGVHTASPGMVLT 216
+L E + V+ PG + T
Sbjct: 170 ETLAMEYAPKGIRVNNIGPGAINT 193
|
Length = 261 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 3e-19
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
S RG+G+A+A G VVV A + +E + T+ ++EN EG+
Sbjct: 14 SGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGI-------------- 59
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
G+ DV + L+ ++ +G DI +NNAG F P L ++ I++ +ST+
Sbjct: 60 ---GVLADVSTREGCETLAKATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTD 115
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
I C++E + MR+ GG I N+ + +G ++YG+ K + L L E
Sbjct: 116 FKSVIYCSQELAKEMRE---GGAIVNI-ASVAGIRPAYGLSIYGAMKAAVINLTKYLALE 171
Query: 199 SKRSKVGVHTASPGMVLTDL 218
K+ V+ +PG V T L
Sbjct: 172 LA-PKIRVNAIAPGFVKTKL 190
|
Length = 252 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 5e-19
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 24/200 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G +A +G +V+ SR+ E +E KEG+ +
Sbjct: 13 ASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIE---KEGV--------------E 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
CDV + ++ +FG IDI +NNAG + P +F E ++ NL
Sbjct: 56 ATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIR-RHPAEEFPEAEWRDVIDVNL 114
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS--STPLTAVYGSTKCGLRQLQASLFK 197
G ++ R M Q G I N+ S S P Y ++K G+ L +L
Sbjct: 115 NGVFFVSQAVARHMIKQ-GHGKIINI---CSLLSELGGPPVPAYAASKGGVAGLTKALAT 170
Query: 198 ESKRSKVGVHTASPGMVLTD 217
E R + V+ +PG T+
Sbjct: 171 EWARHGIQVNAIAPGYFATE 190
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 6e-19
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 24/207 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G +AR G RV + R+ E + A+GG V
Sbjct: 9 SRGIGIEIARALARDGYRVSLGLRNPEDLAALS------------ASGG---------DV 47
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ D +P D + L + + FG ID+ ++NAG L + ++ E+E S N++
Sbjct: 48 EAVPYDARDPEDARALVDALRDRFGRIDVLVHNAGIG-RPTTLREGSDAELEAHFSINVI 106
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
TR + +R+ G + ++ + SG A Y ++K LR L +L +E
Sbjct: 107 APAELTRALLPALREAGS-GRVVFLN-SLSGKRVLAGNAGYSASKFALRALAHALRQEGW 164
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQN 227
V V PG V T + + +
Sbjct: 165 DHGVRVSAVCPGFVDTPMAQGLTLVGA 191
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 1e-18
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 20 STRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+ RG+G + R+ SG V++ +R E + V +L
Sbjct: 8 ANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE-----------------GL 50
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVST 137
V DV + A ++ ++F ++G +DI +NNAG KGF E+ + + T
Sbjct: 51 SVRFHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTR-EQARETMKT 109
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
N G++ T+ + +++ + G I N+ SG S LT+ YG +K L L L K
Sbjct: 110 NFFGTVDVTQALLPLLK-KSPAGRIVNV---SSGLGS--LTSAYGVSKAALNALTRILAK 163
Query: 198 ESKRSKVGVHTASPGMVLTDL 218
E K + + V+ PG V TD+
Sbjct: 164 ELKETGIKVNACCPGWVKTDM 184
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 4e-18
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+G+A A F G +VVVA R + TV + E AGG +
Sbjct: 16 AAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE--------AGGEA--------- 58
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ACDV A+V+ L + +G +D NNAG L + + E + I+ N+
Sbjct: 59 LFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVK 118
Query: 141 GSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G LC + + +M Q GG I N AG G P ++Y ++K + L S E
Sbjct: 119 GVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLGA--APKMSIYAASKHAVIGLTKSAAIEY 175
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ + V+ P ++ TD+
Sbjct: 176 AKKGIRVNAVCPAVIDTDMF 195
|
Length = 253 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 5e-18
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
TRG+G+A+A FL G +V V S+E+ K L V
Sbjct: 16 TRGIGRAIAEAFLREGAKVAVLYNSAEN----------------------EAKELREKGV 53
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I CDV V+K EFG +D+ +NNAG P +F E+ +++ NL
Sbjct: 54 FTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLN 112
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+I T E + +++ K G I N+ G++ T Y TK G+ L L E
Sbjct: 113 GAIYTTYEFLPLLKLS-KNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELG 171
Query: 201 RSKVGVHTASPGMVLTDLLLSGST 224
+ + V+ +PG V TD+ LSG +
Sbjct: 172 KYGIRVNAVAPGWVETDMTLSGKS 195
|
Length = 255 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 5e-18
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A G VVVA ++E ++ +A GG++ + +V
Sbjct: 17 GIGQAYAEALAREGASVVVADINAEGAERVAKQI--------VADGGTA----IAVQV-- 62
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQIVSTNLV 140
DV +P + +++ V+ FG ID +NNA G K L+ + ++ +S NL
Sbjct: 63 ---DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLD 119
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+++CTR + M + GG I N + S YG K GL L L +E
Sbjct: 120 GALVCTRAVYKHMAKR-GGGAIVNQSSTAAWLYSNF----YGLAKVGLNGLTQQLARELG 174
Query: 201 RSKVGVHTASPGMVLTD 217
+ V+ +PG + T+
Sbjct: 175 GMNIRVNAIAPGPIDTE 191
|
Length = 250 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 6e-18
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S RGLG +AR +G V+V R++ ++ V L AAGG++
Sbjct: 19 SARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR--------AAGGAA-------- 62
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+A D+ + V E G +DI +NN G + +PL + + I ++ T+L
Sbjct: 63 -EALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGA-RDRRPLAELDDAAIRALLETDL 120
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
V IL +R A + M+ + G I + +G + AVY + K GL L +L E
Sbjct: 121 VAPILLSRLAAQRMK-RQGYGRIIAITSI-AGQVARAGDAVYPAAKQGLTGLMRALAAEF 178
Query: 200 KRSKVGVHTASPGMVLTD 217
+ + +PG T+
Sbjct: 179 GPHGITSNAIAPGYFATE 196
|
Length = 256 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 6e-18
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+A+A +L G RVV+A R+ E+
Sbjct: 14 AASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--------------------PA 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEEIEQIVST 137
++ DV + ++ AV FG IDI NNA F P+L + + +++ +
Sbjct: 54 AIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAAL---FDMAPILDISRDSYDRLFAV 110
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
N+ G + R M +Q +GG I NM AG G L + Y +TK + S
Sbjct: 111 NVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE--ALVSHYCATKAAVISYTQSAA 168
Query: 197 KESKRSKVGVHTASPGMV 214
R + V+ +PG+V
Sbjct: 169 LALIRHGINVNAIAPGVV 186
|
Length = 257 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 7e-18
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 14 RWFSVVS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 71
W +VV+ T G+GKA A E G V++ SR+ E + E+EE
Sbjct: 2 TW-AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYG---------- 50
Query: 72 KKNLVHAKVAGIACDVC-EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNE 129
V K IA D +++ I I +NN G + + L+ +
Sbjct: 51 ----VETKT--IAADFSAGDDIYERIEKELEGL--DIGILVNNVGISHSIPEYFLETPED 102
Query: 130 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 189
E++ I++ N++ ++ TR + M + KG I N+ + +G TPL A Y ++K L
Sbjct: 103 ELQDIINVNVMATLKMTRLILPGMVKRKKGA-IVNI-SSFAGLIPTPLLATYSASKAFLD 160
Query: 190 QLQASLFKESKRSKVGVHTASPGMVLTDL 218
+L++E K + V + P +V T +
Sbjct: 161 FFSRALYEEYKSQGIDVQSLLPYLVATKM 189
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 83.4 bits (206), Expect = 1e-17
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G+A+A F +GDR+++ R +E + L E A G ++L
Sbjct: 279 RGIGRAVADRFAAAGDRLLIIDRDAEGA--------KKLAE---ALGD---EHLS----- 319
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ D+ + A V+ +G +D+ +NNAG + FKP L+ + E+ ++ NL G
Sbjct: 320 -VQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSG 378
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ C R A R+M +GG I N+ G+ + + P Y ++K + L SL E
Sbjct: 379 AFACARAAARLMS---QGGVIVNL-GSIASLLALPPRNAYCASKAAVTMLSRSLACEWAP 434
Query: 202 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP-------ETVART 244
+ + V+T +PG + T +L+ +I +P E VA
Sbjct: 435 AGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEA 484
|
Length = 520 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 1e-17
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 22/199 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+T G+G A+AR G RV V +R E + TV EL E G +
Sbjct: 11 ATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELRE---AG--------------VE 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G CDV +++ L AV +G ID+ +NNAG + G + +E +V TNL
Sbjct: 54 ADGRTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGG-GATAELADELWLDVVETNL 112
Query: 140 VGSILCTREAMRV--MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
G T+E ++ M ++ G I N+ G G A Y ++K G+ +L
Sbjct: 113 TGVFRVTKEVLKAGGMLERGT-GRIINIASTG-GKQGVVHAAPYSASKHGVVGFTKALGL 170
Query: 198 ESKRSKVGVHTASPGMVLT 216
E R+ + V+ PG V T
Sbjct: 171 ELARTGITVNAVCPGFVET 189
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 81.1 bits (200), Expect = 1e-17
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 22/195 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S RG+G+A A+ ++ G RV +A + E+ R T E+
Sbjct: 11 SARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPA-------------------- 50
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
I+ DV + A + + V+ +GSIDI +NNA P++ T E +++ + N+
Sbjct: 51 ACAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFD-LAPIVDITRESYDRLFAINV 109
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G++ + R M Q +GG I NM + +G L VY +TK + L S
Sbjct: 110 SGTLFMMQAVARAMIAQGRGGKIINM-ASQAGRRGEALVGVYCATKAAVISLTQSAGLNL 168
Query: 200 KRSKVGVHTASPGMV 214
R + V+ +PG+V
Sbjct: 169 IRHGINVNAIAPGVV 183
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 2e-17
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G A+AR G V V S + + L + AAGG +
Sbjct: 14 SRGIGAAIARRLAADGFAVAVNYAGSAAA-------ADELVAEIEAAGG---------RA 57
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ DV + A V +L + A FG ID+ +NNAG + F E+ ++ ++TNL
Sbjct: 58 IAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGV-MPLGTIADFDLEDFDRTIATNLR 116
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+ + REA R + GG I N+ P Y ++K + L L E +
Sbjct: 117 GAFVVLREAARHLGQ---GGRIINLS-TSVIALPLPGYGPYAASKAAVEGLVHVLANELR 172
Query: 201 RSKVGVHTASPGMVLTDLLLSGST 224
+ V+ +PG V T+L +G +
Sbjct: 173 GRGITVNAVAPGPVATELFFNGKS 196
|
Length = 245 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 3e-17
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 41/257 (15%)
Query: 20 STRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77
++RG+G+ALA E L G VV+ +RS E ++ EL L+
Sbjct: 7 ASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLR---------------- 50
Query: 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 137
V + D+ + A V++L G D+ INNAG+ + +E+++
Sbjct: 51 --VTTVKADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDL 108
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASL 195
NL + T +R + + + N+ SG + P +Y S+K L
Sbjct: 109 NLTSPVCLTSTLLRAFKKRGLKKTVVNVS---SGAAVNPFKGWGLYCSSKAARDMFFRVL 165
Query: 196 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGS 255
E V V + +PG+V TD M I E + R R +K
Sbjct: 166 AAEEP--DVRVLSYAPGVVDTD------------MQREIRE--TSADPETRSRFRSLKEK 209
Query: 256 GKAINYLTPPRILLALV 272
G+ ++ L L+
Sbjct: 210 GELLDPEQSAEKLANLL 226
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 3e-17
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+GK +A E +G V +A + + E+ AGG K
Sbjct: 15 AASGIGKEIALELARAGAAVAIADLNQDGANAVADEIN--------KAGG---------K 57
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G+A DV V + FGS+DI ++NAG + P+ ++ + +++ + ++
Sbjct: 58 AIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGI-QIVNPIENYSFADWKKMQAIHV 116
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ L T+ A++ M +GG + M G+ ++PL + Y + K GL L L KE
Sbjct: 117 DGAFLTTKAALKHMYKDDRGGVVIYM-GSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 175
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ V H PG V T L+
Sbjct: 176 AKHNVRSHVVCPGFVRTPLV 195
|
Length = 262 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 5e-17
Identities = 65/260 (25%), Positives = 101/260 (38%), Gaps = 35/260 (13%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ALAREF +G V +A+R ++ + EL V
Sbjct: 9 GIGRALAREFAKAGYNVALAARRTDRLDELKAELLN------PNPS-----------VEV 51
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVG 141
DV + Q + E G +D+ I NAG KG L F + + + TNL+G
Sbjct: 52 EILDVTDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSF--KAFRETIDTNLLG 109
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ A+ R + GH+ + + + P A Y ++K L L SL + K+
Sbjct: 110 AAAILEAALPQFRAK-GRGHLVLI-SSVAALRGLPGAAAYSASKAALSSLAESLRYDVKK 167
Query: 202 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINY 261
+ V +PG + T L T M ++ E A+ + I K +
Sbjct: 168 RGIRVTVINPGFIDTPL-----TANMFTMPFLMS--VEQAAKRIYKAI---KKGAAEPTF 217
Query: 262 ---LTPPRILLALVTAWLRR 278
L P LL L+ LRR
Sbjct: 218 PWRLAVPLRLLKLLPERLRR 237
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 6e-17
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
++G+G A+AREFL G V++ +R ++++ EL E E +V
Sbjct: 18 SKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPER---------------EV 62
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
G+A DV + D + + ++ + + + I +NNAG N K + +T +E I TNL
Sbjct: 63 HGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIR-KAAIDYTEDEWRGIFETNLF 121
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ +R A +++ Q I N+ G+ SG + A YG TK L Q+ +L E
Sbjct: 122 SAFELSRYAHPLLK-QHASSAIVNI-GSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA 179
Query: 201 RSKVGVHTASPGMVLTDL 218
+ V+ +P + T L
Sbjct: 180 EDGIRVNAVAPWYIRTPL 197
|
Length = 257 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 7e-17
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A+A+ G VVVA E V E + + G
Sbjct: 12 GIGLAIAKRLAAEGAAVVVADIDPEIAE-KVAEAAQG-----------------GPRALG 53
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ CDV A VQ AV EFG +DI ++NAG P+ + + E+ + + NL G
Sbjct: 54 VQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATS-SPIAETSLEDWNRSMDINLTGH 112
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
L +REA R+M+ Q GG+I + + + + P A Y + K L L E
Sbjct: 113 FLVSREAFRIMKSQGIGGNIV-FNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGED 171
Query: 203 KVGVHTASPGMVLTDLLLSGSTI 225
+ V+T +P D + GS I
Sbjct: 172 GIRVNTVNP-----DAVFRGSKI 189
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 7e-17
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 20/198 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G A+AR G RV + +R+ E E + A G
Sbjct: 9 ASSGIGLAIARALAREGARVAICARNRE--------NLERAASELRAGGAG--------- 51
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V + D+ +P D+ +L A + FG +DI +NNAG P + T+E+ + L
Sbjct: 52 VLAVVADLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPP-GPFAELTDEDWLEAFDLKL 110
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ I R + M+++ G I N+ + + P + + GL L +L +E
Sbjct: 111 LSVIRIVRAVLPGMKER-GWGRIVNI-SSLTVKEPEPNLVLSNVARAGLIGLVKTLSREL 168
Query: 200 KRSKVGVHTASPGMVLTD 217
V V++ PG + T+
Sbjct: 169 APDGVTVNSVLPGYIDTE 186
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 8e-17
Identities = 39/139 (28%), Positives = 52/139 (37%), Gaps = 17/139 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+ LG L G RV VA +SE E+ EG
Sbjct: 12 QTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG---------------MAY 56
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
G D V LS FG +D+ + NAG K + F + ++ + NLVG
Sbjct: 57 GFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKA-AFITDFQLGDFDRSLQVNLVG 115
Query: 142 SILCTREAMRVM-RDQPKG 159
LC RE R+M RD +G
Sbjct: 116 YFLCAREFSRLMIRDGIQG 134
|
Length = 259 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 9e-17
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG A+AR F G V +A+R +LE L + + AGGS+K
Sbjct: 10 GLGAAIARRFAAEGFSVALAARREA-------KLEALLVDIIRDAGGSAK---------A 53
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ D + +V L + E G +++ + NAG N F P+L+ T E++ G
Sbjct: 54 VPTDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWF-PILETTPRVFEKVWEMAAFGG 112
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
L REA + M + +G IF GA + A + K LR L S+ +E
Sbjct: 113 FLAAREAAKRMLARGRGTIIFT--GATASLRGRAGFAAFAGAKFALRALAQSMARE--LG 168
Query: 203 KVGVHTA 209
G+H A
Sbjct: 169 PKGIHVA 175
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 2e-16
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74
WF ++ G G+ + L GDRV R +++ + L
Sbjct: 5 WFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVL----------- 53
Query: 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 134
DV + A V+ + + A G ID+ ++NAG F + ++ +I +
Sbjct: 54 ---------QLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGL-FGAAEELSDAQIRRQ 103
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 194
+ TNL+GSI R A+ +R Q GG I + G G + P ++Y +TK G+ +
Sbjct: 104 IDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSEG-GQIAYPGFSLYHATKWGIEGFVEA 161
Query: 195 LFKESKRSKVGVHTASPGMVLTD 217
+ +E + PG T+
Sbjct: 162 VAQEVAPFGIEFTIVEPGPARTN 184
|
Length = 276 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 4e-16
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 19/195 (9%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ A F G VV + + T + AAG HA
Sbjct: 326 GIGRETALAFAREGAEVVASDIDEAAAERTAELIR--------AAGAV-----AHAYR-- 370
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
DV + ++ + + E G DI +NNAG L + E+ ++++ NL G
Sbjct: 371 --VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMA-GGFLDTSAEDWDRVLDVNLWGV 427
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
I R R M ++ GGHI N+ A + S L A Y ++K + L L E +
Sbjct: 428 IHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPA-YATSKAAVLMLSECLRAELAAA 486
Query: 203 KVGVHTASPGMVLTD 217
+GV PG V T+
Sbjct: 487 GIGVTAICPGFVDTN 501
|
Length = 582 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-16
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A+AR + G +VV +R + + E + AG + +
Sbjct: 17 GIGAAVARALVQHGMKVVGCARRVDKIEALAAECQS--------AGYPT--------LFP 60
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
CD+ + + + + +D+ INNAG + +PLL E +++ N++
Sbjct: 61 YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARP-EPLLSGKTEGWKEMFDVNVLAL 119
Query: 143 ILCTREAMRVMRDQ-PKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKE-- 198
+CTREA + M+++ GHI N++ +G + Y +TK + L L +E
Sbjct: 120 SICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELR 179
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
++ + + SPG+V T+
Sbjct: 180 EAKTHIRATSISPGLVETEFA 200
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 2e-15
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G+ +A G RV++ RS EL + ++AAG
Sbjct: 14 QGIGRGVAERLAGEGARVLLVDRS---------ELVHEVLAEILAAGD---------AAH 55
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
D+ A Q + AV FG +D+ INN G KP + E+IE + +L
Sbjct: 56 VHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFP 115
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
++ C R + M ++ + G I N+ A G P Y + K G+ L ASL E
Sbjct: 116 TLWCCRAVLPHMLER-QQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHA 170
Query: 201 RSKVGVHTASPG 212
R + V+ +PG
Sbjct: 171 RDGIRVNAVAPG 182
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 2e-15
Identities = 54/198 (27%), Positives = 79/198 (39%), Gaps = 25/198 (12%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RGLG A AR + G +VV++ E + EL + H
Sbjct: 14 ARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGD-------------AARFFHL-- 58
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
DV + + + A FG +D+ +NNAG G + T EE +++ NL
Sbjct: 59 -----DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTG-GTVETTTLEEWRRLLDINLT 112
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G L TR + M++ GG I NM G P A Y ++K +R L S E
Sbjct: 113 GVFLGTRAVIPPMKEA-GGGSIINMSSI-EGLVGDPALAAYNASKGAVRGLTKSAALECA 170
Query: 201 RSKVG--VHTASPGMVLT 216
G V++ PG + T
Sbjct: 171 TQGYGIRVNSVHPGYIYT 188
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 2e-15
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 34/206 (16%)
Query: 24 LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83
+GKA + L +G R+++A ++ ++ EL NL +V +
Sbjct: 14 IGKAFCKALLSAGARLILADINAPALEQLKEELT----------------NLYKNRVIAL 57
Query: 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKG-FKPLLQFTNEEIEQIVSTNLVG 141
D+ +++L + +FG IDI INNA + K +F E+ ++++ NL G
Sbjct: 58 ELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGG 117
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGS------------GGSSTPLTAVYGSTKCGLR 189
+ LC++ +++ + Q G I N+ S + Y K G+
Sbjct: 118 AFLCSQAFIKLFKKQ-GKGSIINI---ASIYGVIAPDFRIYENTQMYSPVEYSVIKAGII 173
Query: 190 QLQASLFKESKRSKVGVHTASPGMVL 215
L L K + + V+ SPG +L
Sbjct: 174 HLTKYLAKYYADTGIRVNAISPGGIL 199
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 3e-15
Identities = 61/232 (26%), Positives = 90/232 (38%), Gaps = 26/232 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+G A A+ L G +V + R+ E+ EL+ + K
Sbjct: 9 ASGIGLATAKLLLKKGAKVAILDRN-ENPGAA-AELQAINPKV---------------KA 51
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE--IEQIVSTN 138
+ CDV + A+ +FG +DI INNAG K L E+ + N
Sbjct: 52 TFVQCDVTSWEQLAAAFKKAIEKFGRVDILINNAGILDE-KSYLFAGKLPPPWEKTIDVN 110
Query: 139 LVGSILCTREAMRVMR--DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
L G I T A+ M KGG I N+ G P VY ++K G+ SL
Sbjct: 111 LTGVINTTYLALHYMDKNKGGKGGVIVNIGSVA-GLYPAPQFPVYSASKHGVVGFTRSLA 169
Query: 197 KESK-RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICELPETVARTLV 246
+ ++ V V+ PG T LL + +M + PE VA+ +V
Sbjct: 170 DLLEYKTGVRVNAICPGFTNTP-LLPDLVAKEAEMLPSAPTQSPEVVAKAIV 220
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 3e-15
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G+ + R F+ +G +VV +R + + +EL A GS K
Sbjct: 18 SRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNR-------AGPGSCKF------- 63
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ CDV + D++ L + V FG ID +NNAG + + + + +E +++ NL+
Sbjct: 64 --VPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLI 121
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
L ++ A+ +R G+I N+ GS G A Y +TK + + +L +
Sbjct: 122 SYFLASKYALPHLRKSQ--GNIINLSSLVGSIGQKQ--AAPYVATKGAITAMTKALAVDE 177
Query: 200 KRSKVGVHTASPGMVLTDLL--LSGST 224
R V V+ SPG + T L L+ T
Sbjct: 178 SRYGVRVNCISPGNIWTPLWEELAAQT 204
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 4e-15
Identities = 57/215 (26%), Positives = 82/215 (38%), Gaps = 39/215 (18%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+GKA A+ G VV+A E+ EL + G
Sbjct: 433 GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG------------------PDRALG 474
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ACDV + A VQ A FG +DI ++NAG P+ + ++E+ + N G
Sbjct: 475 VACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG-IAISGPIEETSDEDWRRSFDVNATGH 533
Query: 143 ILCTREAMRVMRDQPKGGHI-FNMD------GAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
L REA+R+M+ Q GG I F G G YG+ K L L
Sbjct: 534 FLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGA--------YGAAKAAELHLVRQL 585
Query: 196 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 230
E + V+ V D ++ GS I +
Sbjct: 586 ALELGPDGIRVN-----GVNPDAVVRGSGIWTGEW 615
|
Length = 681 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 4e-15
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 25/206 (12%)
Query: 20 STRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
++RG+G+A+A E G D + + V E+ AAG
Sbjct: 9 ASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVL--------AAGR--------- 51
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVST 137
+ D+ E +D + L + A +FG +D +NNAG + LL T + +++++
Sbjct: 52 RAIYFQADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAI 111
Query: 138 NLVGSILCTREAMRVMRDQPKG-----GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 192
NL G T+ R M +QP I + + S P Y +K GL
Sbjct: 112 NLRGPFFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVS-PNRGEYCISKAGLSMAT 170
Query: 193 ASLFKESKRSKVGVHTASPGMVLTDL 218
L + VH PG++ TD+
Sbjct: 171 RLLAYRLADEGIAVHEIRPGLIHTDM 196
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 71.4 bits (176), Expect = 5e-15
Identities = 43/172 (25%), Positives = 63/172 (36%), Gaps = 23/172 (13%)
Query: 21 TRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
T GLG ALAR G R +V SR L + A G A+
Sbjct: 9 TGGLGLALARWLAAEGARHLVLVSRRGP------APGAAELVAELEALG---------AE 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V ACDV + + L G +D ++NAG PL + T E E++++ +
Sbjct: 54 VTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLD-DGPLEELTPERFERVLAPKV 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 191
G+ + RD G + +G +P A Y + L L
Sbjct: 113 TGAWNLH----ELTRDLD-LGAFVLF-SSVAGVLGSPGQANYAAANAALDAL 158
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 6e-15
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+G+GK +A G V VA + E+ + T E+ + AGG A
Sbjct: 8 GAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ--------AGG-------KAV 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV + V + A +FG D+ +NNAG P+L+ T EE++++ + N+
Sbjct: 53 AYKL--DVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNV 109
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G + + A R + Q GG I N + +G P+ + Y STK +R L + +E
Sbjct: 110 KGVLFGIQAAARQFKKQGHGGKIINA-ASIAGHEGNPILSAYSSTKFAVRGLTQTAAQEL 168
Query: 200 KRSKVGVHTASPGMVLTDL 218
+ V+ PG+V T +
Sbjct: 169 APKGITVNAYCPGIVKTPM 187
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 1e-14
Identities = 53/198 (26%), Positives = 80/198 (40%), Gaps = 27/198 (13%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A+A F G RV + RS + + L N K G
Sbjct: 26 GIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAK--------------------G 65
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ CDV + V+ ++ FG IDI +N+AG P + E+ ++ + NL GS
Sbjct: 66 LVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGS 124
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKESK 200
L + R M GG I N+ S L Y ++K G+ + L E
Sbjct: 125 FLMAQAVGRHMIAA-GGGKIVNL---ASQAGVVALERHVAYCASKAGVVGMTKVLALEWG 180
Query: 201 RSKVGVHTASPGMVLTDL 218
+ V+ SP +VLT+L
Sbjct: 181 PYGITVNAISPTVVLTEL 198
|
Length = 255 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 1e-14
Identities = 55/213 (25%), Positives = 84/213 (39%), Gaps = 36/213 (16%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T LG A+AR +G +V R+ E E+ A GG +
Sbjct: 14 TGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEIT--------ALGGRAI-------- 57
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-------------GFKPLLQFT 127
+A DV + A +++ V +FG++DI IN AG N +
Sbjct: 58 -ALAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLD 116
Query: 128 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTK 185
E E + NL GS L ++ + M +Q KGG I N+ S + +PLT Y + K
Sbjct: 117 EEGWEFVFDLNLNGSFLPSQVFGKDMLEQ-KGGSIINI---SSMNAFSPLTKVPAYSAAK 172
Query: 186 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218
+ L E + V V+ +PG +T
Sbjct: 173 AAVSNFTQWLAVEFATTGVRVNAIAPGFFVTPQ 205
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 1e-14
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 20/196 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A AR G V +A+R + + ELE A GG A V
Sbjct: 14 GIGEATARALAAEGAAVAIAARRVDRLEALADELE--------AEGG-------KALV-- 56
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + V V G +DI +NNAG P+ + +++ TNL+G
Sbjct: 57 LELDVTDEQQVDAAVERTVEALGRLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGL 115
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+ T A+ + G I N+ +G + +AVY +TK G+ L +E
Sbjct: 116 MYTTHAALPHHLLR-NKGTIVNISSV-AGRVAVRNSAVYNATKFGVNAFSEGLRQEVTER 173
Query: 203 KVGVHTASPGMVLTDL 218
V V PG V T+L
Sbjct: 174 GVRVVVIEPGTVDTEL 189
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 1e-14
Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+GKA+A +G VV+A SE +++ GG + G
Sbjct: 10 GIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQA--------GG---------QAIG 52
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVG 141
+ C+V D++ + V++FG I I +NNAG G KP + T E+ E NL
Sbjct: 53 LECNVTSEQDLEAVVKATVSQFGGITILVNNAGGG-GPKPFDMPMTEEDFEWAFKLNLFS 111
Query: 142 ----SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
S LC + GG I N+ + S + A YGS+K + + +L
Sbjct: 112 AFRLSQLCAPHMQ-----KAGGGAILNI-SSMSSENKNVRIAAYGSSKAAVNHMTRNLAF 165
Query: 198 ESKRSKVGVHTASPGMVLTDLLLSGST 224
+ + V+ +PG V TD L S T
Sbjct: 166 DLGPKGIRVNAVAPGAVKTDALASVLT 192
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 2e-14
Identities = 60/233 (25%), Positives = 96/233 (41%), Gaps = 33/233 (14%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ALA +G R+++ R++E + L + V A
Sbjct: 16 GIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-----------YPGRHRWVVA---- 60
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
D+ A + + A E G I++ INNAG N F L E IE++++ NL
Sbjct: 61 ---DLTSEAGREAVLARA-REMGGINVLINNAGVNH-FALLEDQDPEAIERLLALNLTAP 115
Query: 143 ILCTREAMRVMRDQPKG-----GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
+ TR + ++R QP G F GS G P A Y ++K LR +L +
Sbjct: 116 MQLTRALLPLLRAQPSAMVVNVGSTF-----GSIG--YPGYASYCASKFALRGFSEALRR 168
Query: 198 ESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250
E + V V +P T + N+ + N + + PE VA ++ I
Sbjct: 169 ELADTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDD-PEDVAAAVLQAIE 220
|
Length = 263 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 2e-14
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 47/215 (21%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+GLG+A+A G ++ + + E + V E A G +V
Sbjct: 15 QGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECG--------ALGT---------EVR 57
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---------------TNKGFKPLLQF 126
G A +V + DV+ +FG ++ INNAG T+K L QF
Sbjct: 58 GYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSK--MSLEQF 115
Query: 127 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG---AGSGGSSTPLTAVYGS 183
+ ++ NL G LC REA M + G I N+ AG+ G + Y +
Sbjct: 116 -----QSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN-----YSA 165
Query: 184 TKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218
+K G+ + + KE R + V +PG++ T++
Sbjct: 166 SKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200
|
Length = 253 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 5e-14
Identities = 64/259 (24%), Positives = 99/259 (38%), Gaps = 35/259 (13%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ LA EF G +VV+ + + T + + + VH
Sbjct: 10 GIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGK-------------VHYYK-- 54
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
CDV + +V + + E G + I INNAG G K LL+ +EEIE+ N +
Sbjct: 55 --CDVSKREEVYEAAKKIKKEVGDVTILINNAGVVSG-KKLLELPDEEIEKTFEVNTLAH 111
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKR 201
T+ + M ++ GHI + A G S A Y ++K SL E K
Sbjct: 112 FWTTKAFLPDMLERNH-GHIVTI--ASVAGLISPAGLADYCASKAAAVGFHESLRLELKA 168
Query: 202 SKV-GVHTA--SPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKA 258
G+ T P + T + G + I+ PE VA +V I + +
Sbjct: 169 YGKPGIKTTLVCPYFINTG-MFQGVKTPRPLLAPIL--EPEYVAEKIVRAIL----TNQQ 221
Query: 259 INYLTPPRILLALVTAWLR 277
+ YL P + R
Sbjct: 222 MLYL--PFY-AYFLPILKR 237
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 6e-14
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST G+G A+AR G VVV+SR ++V V L+ EG+
Sbjct: 18 STDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQ---GEGL--------------S 60
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V G C V + D ++L AVN G +DI ++NA N F +L T E ++I+ N+
Sbjct: 61 VTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNV 120
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV--YGSTKCGLRQLQASLFK 197
+ L T+ + M + G + S + P + Y +K L L +L
Sbjct: 121 KATALMTKAVVPEMEKRGGGSVVI----VSSVAAFHPFPGLGPYNVSKTALLGLTKNLAP 176
Query: 198 ESKRSKVGVHTASPGMVLT 216
E + V+ +PG++ T
Sbjct: 177 ELAPRNIRVNCLAPGLIKT 195
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 8e-14
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G+ LA G R+V+++R E LEE +K S L
Sbjct: 11 ASSGIGEELAYHLARLGARLVLSARREE-------RLEE-VK--------SECLELGAPS 54
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI-EQIVSTN 138
+ D+ + D +++ A+ FG +DI INNAG + L T+ ++ +I+ N
Sbjct: 55 PHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSLFHDTSIDVDRKIMEVN 112
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G + T+ A+ + ++ G I + +G P Y ++K L+ SL E
Sbjct: 113 YFGPVALTKAALPHLIER-SQGSIVVVSSI-AGKIGVPFRTAYAASKHALQGFFDSLRAE 170
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ V PG++ T++
Sbjct: 171 LSEPNISVTVVCPGLIDTNI 190
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 9e-14
Identities = 54/204 (26%), Positives = 81/204 (39%), Gaps = 36/204 (17%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ALA +G ++V+A+R+ + EL + +
Sbjct: 12 GIGRALAVRLARAGAQLVLAARNETRLASLAQELAD-----------------HGGEALV 54
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--KGFKPLLQFTNEEIEQIVSTNLV 140
+ DV + ++L AV FG IDI +NNAG F L E+++ N +
Sbjct: 55 VPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDL--SVFERVMRVNYL 112
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP-LTAV-----YGSTKCGLRQLQAS 194
G++ CT A+ P H+ G SS LT V Y ++K L S
Sbjct: 113 GAVYCTHAAL------P---HLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDS 163
Query: 195 LFKESKRSKVGVHTASPGMVLTDL 218
L E V V PG V TD+
Sbjct: 164 LRIELADDGVAVTVVCPGFVATDI 187
|
Length = 263 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 1e-13
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE-LE---ENLKEGMMAAGGSSKKNL 75
++RG+G+A+A +G VVVA++++ + L E E + AAGG
Sbjct: 11 ASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGG------ 64
Query: 76 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG----TNKGFKPLLQFTNEEI 131
+ I DV + V+ L V++FG +DI +NNAG + P +F
Sbjct: 65 ---QALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRF----- 116
Query: 132 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLR 189
+ + NL G+ L ++ A+ M + GHI N+ S P Y + K G+
Sbjct: 117 DLMQRVNLRGTYLLSQAALPHMVKAGQ-GHILNI---SPPLSLRPARGDVAYAAGKAGMS 172
Query: 190 QLQASLFKESKRSKVGVHTASPGMVLT 216
+L L E +R + V++ P +
Sbjct: 173 RLTLGLAAELRRHGIAVNSLWPSTAIE 199
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 1e-13
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G+A+A+ G V+V+SR + + ++AAGG ++
Sbjct: 17 SRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADA--------IVAAGGKAE-------- 60
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+AC + E + L G +DI +NNA N F +L ++ V N+
Sbjct: 61 -ALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIR 119
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G + EA ++M++Q GG I N+ + +G S +Y TK + + + KE
Sbjct: 120 GYFFMSVEAGKLMKEQ-GGGSIVNV-ASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA 177
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 232
+ V+ PG LTD + + +N +
Sbjct: 178 PFGIRVNALLPG--LTDTKFASALFKNDAILK 207
|
Length = 252 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 1e-13
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T G+G ALAR+FL +G+ V++ R EE L E + +H V
Sbjct: 14 TSGIGLALARKFLEAGNTVIITGRR-----------EERLAE-AKKELPN-----IHTIV 56
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNL 139
DV + V+ L+ ++E+ ++DI INNAG + ++ + + TNL
Sbjct: 57 ----LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNL 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLRQLQASLFK 197
+G I + + ++ QP+ I N+ SG + P+ A VY +TK L +L
Sbjct: 113 IGPIRLIKAFLPHLKKQPEAT-IVNV---SSGLAFVPMAANPVYCATKAALHSYTLALRH 168
Query: 198 ESKRSKVGVHTASPGMVLTDL 218
+ K + V V P V T+L
Sbjct: 169 QLKDTGVEVVEIVPPAVDTEL 189
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 1e-13
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G A A G V + + + E + + + GG +
Sbjct: 10 ASRGIGAATALLAAERGYAVCLNYLRNR-------DAAEAVVQAIRRQGGEA-------- 54
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+A DV + ADV +L E G +D +NNAG + L Q + +I +TN+
Sbjct: 55 -LAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNV 113
Query: 140 VGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
VGS LC REA++ M R +GG I N+ + S Y ++K + + L K
Sbjct: 114 VGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAK 173
Query: 198 ESKRSKVGVHTASPGMVLTDLLLSG 222
E + V+ PG++ T++ SG
Sbjct: 174 EVAAEGIRVNAVRPGVIYTEIHASG 198
|
Length = 248 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 1e-13
Identities = 48/199 (24%), Positives = 70/199 (35%), Gaps = 38/199 (19%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A+ +E L +G VV A + G +N
Sbjct: 20 GIGLAIVKELLANGANVVNAD---------------------IHGGDGQHENYQFVP--- 55
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--------KGFKPLLQFTNEEIEQI 134
DV +V + +FG ID +NNAG N K + +++
Sbjct: 56 --TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKM 113
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQA 193
+ N G L ++ R M Q G I NM AG GS + Y +TK L
Sbjct: 114 FNINQKGVFLMSQAVARQMVKQ-HDGVIVNMSSEAGLEGSEG--QSCYAATKAALNSFTR 170
Query: 194 SLFKESKRSKVGVHTASPG 212
S KE + + V +PG
Sbjct: 171 SWAKELGKHNIRVVGVAPG 189
|
Length = 266 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 2e-13
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 34/204 (16%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A+ F G +VVV +R EL++ L + A GG +
Sbjct: 17 GIGRAAAKLFAREGAKVVVGARRQA-------ELDQ-LVAEIRAEGG---------EAVA 59
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+A DV + A + L AV FG +DI NNAGT P+ + + E + ++TNL +
Sbjct: 60 LAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSA 119
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--------PLTAVYGSTKCGLRQLQAS 194
L + + M + G IF +ST P A Y ++K GL L
Sbjct: 120 FLGAKHQIPAMLARGGGSLIF---------TSTFVGHTAGFPGMAAYAASKAGLIGLTQV 170
Query: 195 LFKESKRSKVGVHTASPGMVLTDL 218
L E + V+ PG T +
Sbjct: 171 LAAEYGAQGIRVNALLPGGTDTPM 194
|
Length = 254 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 3e-13
Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+G+G A+AR F G V +A + + + AG A+V
Sbjct: 16 AQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD------VAG---------ARV 60
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ DV + A V A FG +D+ +NNAG N F L T+E+ + + +L
Sbjct: 61 LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLD 119
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKES 199
G+ R + M ++ G I N+ A + P Y K GL L +L E
Sbjct: 120 GAWNGCRAVLPGMVER-GRGSIVNI--ASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEY 176
Query: 200 KRSKVGVHTASPGMVLTDL 218
V V+ +PG + T L
Sbjct: 177 AARNVRVNAIAPGYIETQL 195
|
Length = 260 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 4e-13
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 29/217 (13%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G G+ +AR F G RVV+A +++ ++ E
Sbjct: 14 GSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEA--------------------- 52
Query: 81 AGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
IA DV + ADV+ + A+++FG +DI +NNAG KP+L+ EE +++ + N
Sbjct: 53 -AIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVN 111
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ L + + M +Q GG I N+ G P Y ++K + ++ E
Sbjct: 112 VKSIYLSAQALVPHMEEQ-GGGVIINIASTA-GLRPRPGLTWYNASKGWVVTATKAMAVE 169
Query: 199 SKRSKVGVHTASPGMVLTDLL---LSGSTIQNKQMFN 232
+ V+ P T LL + T +N+ F
Sbjct: 170 LAPRNIRVNCLCPVAGETPLLSMFMGEDTPENRAKFR 206
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 5e-13
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RGLG +A +G RVV+++R +E + LE A G
Sbjct: 22 RGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLE--------ALG---------IDAL 64
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
IA DV + AD+++L+ + FG +DI +NNAG G P E +++++ N+ G
Sbjct: 65 WIAADVADEADIERLAEETLERFGHVDILVNNAGATWG-APAEDHPVEAWDKVMNLNVRG 123
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPL--TAVYGSTKCGLRQLQASLFKE 198
L ++ + G I N+ AG GG+ + T Y ++K + +L E
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183
Query: 199 SKRSKVGVHTASPG 212
+ V+ +PG
Sbjct: 184 WGPHGIRVNAIAPG 197
|
Length = 259 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 6e-13
Identities = 76/290 (26%), Positives = 106/290 (36%), Gaps = 48/290 (16%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G A AR G RV + + T EL V
Sbjct: 15 RGIGLATARALAALGARVAIGDLDEALAKETAAEL---------------------GLVV 53
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE---IEQIVSTN 138
G DV +PA + + G ID+ +NNAG P+ F +E +I+ N
Sbjct: 54 GGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGV----MPVGPFLDEPDAVTRRILDVN 109
Query: 139 LVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
+ G IL ++ A M P+G GH+ N+ +G P A Y ++K + +
Sbjct: 110 VYGVILGSKLAAPRMV--PRGRGHVVNVASL-AGKIPVPGMATYCASKHAVVGFTDAARL 166
Query: 198 ESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV-------PRIR 250
E + + V V P V T+ L T K N E PE VA +V P +R
Sbjct: 167 ELRGTGVHVSVVLPSFVNTE--LIAGTGGAKGFKN--VE-PEDVAAAIVGTVAKPRPEVR 221
Query: 251 VVK--GSGKAINYLTPPRILLALVTAWL--RRGRWFDDQGRALYAAEADR 296
V + G L P R+ AL R D RA Y A
Sbjct: 222 VPRALGPLAQAQRLLPRRVREALNRLLGGDRVFLDVDTAARAAYERRARG 271
|
Length = 273 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 6e-13
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 4/163 (2%)
Query: 84 ACDVCEPAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
A DV + A L++FA G +D NNAG +G P +++V N+ G
Sbjct: 53 ALDVTDRAAWAAALADFAAATGGRLDALFNNAGVGRG-GPFEDVPLAAHDRMVDINVKGV 111
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+ A+ ++ P G + N + S P AVY +TK +R L +L E R
Sbjct: 112 LNGAYAALPYLKATP-GARVINTASS-SAIYGQPDLAVYSATKFAVRGLTEALDVEWARH 169
Query: 203 KVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245
+ V P V T +L G T + VA+ +
Sbjct: 170 GIRVADVWPWFVDTPILTKGETGAAPKKGLGRVLPVSDVAKVV 212
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 7e-13
Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 18/194 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+ LG+ L +G V VA +SE+ E+ E K
Sbjct: 12 QTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGE----------------KAY 55
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
G D V LS F +D+ + +AG K + F + ++ + NLVG
Sbjct: 56 GFGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKS-AKITDFELGDFDRSLQVNLVG 114
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
LC RE ++M G I ++ + SG + + Y + K G L SL +
Sbjct: 115 YFLCAREFSKLMIRDGIQGRIIQIN-SKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAE 173
Query: 202 SKVGVHTASPGMVL 215
+ V++ G +L
Sbjct: 174 HGITVNSLMLGNLL 187
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 7e-13
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 21 TRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RG+G+A A G V + +R + + T + AAGG A
Sbjct: 11 SRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVR--------AAGG-------RAC 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V +A DV ADV + + + FG +D +NNAG PL + ++ TN+
Sbjct: 56 V--VAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV 113
Query: 140 VGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
+G+ LC REA R + +GG I N+ S S Y +K + L L K
Sbjct: 114 LGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAK 173
Query: 198 ESKRSKVGVHTASPGMVLTDLLLSG 222
E V V+ PG++ T++ SG
Sbjct: 174 ELGPHGVRVNAVRPGLIETEIHASG 198
|
Length = 248 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 8e-13
Identities = 64/251 (25%), Positives = 101/251 (40%), Gaps = 43/251 (17%)
Query: 22 RGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RG+G L R+ L G+ V+A+ R + TEL AA G+S L
Sbjct: 8 RGIGLELVRQLLARGNNTVIATCRDPSAA----TEL---------AALGASHSRLH---- 50
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGS------IDIWINNAGTNKGFKPLLQFTNEEIEQI 134
DV + +D+ INNAG + P + +E++ ++
Sbjct: 51 -------ILELDVTDEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEV 103
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAV-YGSTKCGLRQLQ 192
N++G +L T+ + ++ + I N+ GS G +T Y ++K L L
Sbjct: 104 FQVNVLGPLLLTQAFLPLLL-KGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLT 162
Query: 193 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV 252
SL E KR + V + PG V TD + G +NK PE L+ I +
Sbjct: 163 KSLAVELKRDGITVVSLHPGWVRTD--MGGPFAKNKGPIT-----PEESVAGLLKVIDNL 215
Query: 253 K--GSGKAINY 261
SGK ++Y
Sbjct: 216 NEEDSGKFLDY 226
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 9e-13
Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 19/199 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ RG+G A+ARE L G RV+ S + E + +
Sbjct: 10 AKRGIGSAIARELLNDGYRVIATYFSGND---CAKDWFE-------------EYGFTEDQ 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V DV + + + E G +DI +NNAG + + +++E +++TNL
Sbjct: 54 VRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRD-SVFKRMSHQEWNDVINTNL 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
T+ M +Q G I N+ +G Y + K G+ +L E
Sbjct: 113 NSVFNVTQPLFAAMCEQ-GYGRIINISSV-NGLKGQFGQTNYSAAKAGMIGFTKALASEG 170
Query: 200 KRSKVGVHTASPGMVLTDL 218
R + V+ +PG + T +
Sbjct: 171 ARYGITVNCIAPGYIATPM 189
|
Length = 245 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 1e-12
Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 37/272 (13%)
Query: 20 STRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
S+RG+GKA+A G D V +RS ++ T E+E A G
Sbjct: 12 SSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIE--------ALG---------R 54
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
K + +V + ++++ EFG +D+++NNA + +P ++ + ++ N
Sbjct: 55 KALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGV-LRPAMELEESHWDWTMNIN 113
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ C +EA ++M ++ GG I ++ GS T V G +K L L L E
Sbjct: 114 AKALLFCAQEAAKLM-EKVGGGKIISLSSLGSIRYLENYTTV-GVSKAALEALTRYLAVE 171
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKA 258
+ V+ S G V TD L K N L + A+T R+ + A
Sbjct: 172 LAPKGIAVNAVSGGAVDTDAL--------KHFPNREELLEDARAKTPAGRMVEPEDVANA 223
Query: 259 INYLTPPRILLALVTAWLRRGR-WFDDQGRAL 289
+ +L P A + RG+ D GR+L
Sbjct: 224 VLFLCSPE-------ADMIRGQTIIVDGGRSL 248
|
Length = 250 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 1e-12
Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 63/310 (20%)
Query: 17 SVVSTR---GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 73
VV T G+G+A A F G R+V+A+R E+++ E
Sbjct: 9 VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA--------------- 53
Query: 74 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK----PLLQFTNE 129
+ A+V + DV + V+ L+ A + G ID+W+NN G + P+ E
Sbjct: 54 --LGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPI-----E 106
Query: 130 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF-NMDGAGSGGSSTPLTAVYGSTKCGL 188
EQ++ TNL+G + A+ + + Q G IF NM G G ++ P A Y ++K GL
Sbjct: 107 AHEQVIQTNLIGYMRDAHAALPIFKKQGHG--IFINMISLG-GFAAQPYAAAYSASKFGL 163
Query: 189 RQLQASLFKE-SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ------MFNIICELPETV 241
R +L E + + V P + T G+ ++ +++ P V
Sbjct: 164 RGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYD-----PRRV 218
Query: 242 ARTLV-----PRIRVVKGSGKAI----NYLTPPRILLALVTAWLRRGRWFDDQGRA---- 288
A+ +V PR G+ + ++L P L A + L R R+ RA
Sbjct: 219 AKAVVRLADRPRATTTVGAAARLARLAHFLAPG--LTARLMGRLTR-RYLARAPRAARSS 275
Query: 289 --LYAAEADR 296
L+A +
Sbjct: 276 GNLFAPPSGA 285
|
Length = 330 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-12
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG+A+A G V+V M + + G+ AAGG K
Sbjct: 16 GGLGRAIAVRLAADGADVIVLDIHP----MRGRAEADAVAAGIEAAGG---------KAL 62
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
G+A DV + A + + V EFG +DI +NNAG + + EE + ++ NL G
Sbjct: 63 GLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATD-AAFAELSIEEWDDVIDVNLDG 121
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
T+ A+ M +GG I N+ AG G+ + Y ++K GL L +L E
Sbjct: 122 FFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVN--YAASKAGLIGLTKTLANELA 179
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ V+ +PG + T +
Sbjct: 180 PRGITVNAVAPGAINTPMA 198
|
Length = 249 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 26/200 (13%)
Query: 19 VSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
VS+ G G+ALA+ L +G RVV RS + +
Sbjct: 12 VSS-GFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDR------------------- 51
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIVST 137
DV + + + A FG ID+ +NNAG G + ++ + E+ +
Sbjct: 52 -ALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGY--GHEGAIEESPLAEMRRQFEV 108
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
N+ G++ T+ + MR + + GHI N+ G G + P Y +K L + SL K
Sbjct: 109 NVFGAVAMTKAVLPGMRAR-RRGHIVNITSMG-GLITMPGIGYYCGSKFALEGISESLAK 166
Query: 198 ESKRSKVGVHTASPGMVLTD 217
E + V PG TD
Sbjct: 167 EVAPFGIHVTAVEPGSFRTD 186
|
Length = 277 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 3e-12
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RGLG A+A F +G V++A+R T ++L+E + E + AAG ++ V
Sbjct: 20 RGLGAAIALAFAEAGADVLIAAR-------TESQLDE-VAEQIRAAG---RRAHV----- 63
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+A D+ P L+ AV FG +DI +NN G PLL + +++ + N+
Sbjct: 64 -VAADLAHPEATAGLAGQAVEAFGRLDIVVNNVG-GTMPNPLLSTSTKDLADAFTFNVAT 121
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL----RQLQASLFK 197
+ T A+ +M + GG + N+ G + A YG+ K L R L
Sbjct: 122 AHALTVAAVPLMLEHSGGGSVINISST-MGRLAGRGFAAYGTAKAALAHYTRLAALDL-- 178
Query: 198 ESKRSKVGVHTASPGMVLTDLL 219
++ V+ +PG +LT L
Sbjct: 179 ---CPRIRVNAIAPGSILTSAL 197
|
Length = 263 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 3e-12
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 46/235 (19%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+G+GKA+ G +VV+ SS+ E ENL + G V
Sbjct: 15 AKGIGKAITVALAQEGAKVVINYNSSK-------EAAENLVNELGKEGH---------DV 58
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQIVSTN 138
+ DV + D +L AVN FG +DI +NNAG ++ FK L E+ E+++ N
Sbjct: 59 YAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKL---NREDWERVIDVN 115
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDG----AGSGGSSTPLTAVYGSTKCGLRQLQAS 194
L S+ T A+ + + G I ++ AG G + Y + K G+ S
Sbjct: 116 L-SSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTN-----YSAAKAGMLGFTKS 169
Query: 195 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249
L E ++ V V+ PG + T++ + E+PE V + +V +I
Sbjct: 170 LALELAKTNVTVNAICPGFIDTEM---------------VAEVPEEVRQKIVAKI 209
|
Length = 247 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 4e-12
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 18 VVSTRG---LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74
V T G LG A+A+E +G +V + R+ E V E++ AAGG +
Sbjct: 13 AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK--------AAGGEAL-- 62
Query: 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--------------KGF 120
+ DV + +++ + +FG DI IN AG N +
Sbjct: 63 -------AVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPT 115
Query: 121 KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV 180
K E E + NL+G++L T+ + M + KGG+I N+ S + TPLT V
Sbjct: 116 KTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINI---SSMNAFTPLTKV 171
Query: 181 --YGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217
Y + K + L + + V+ +PG LT+
Sbjct: 172 PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTE 210
|
Length = 278 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 4e-12
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A R F G +V V + E+ ++ GG+++
Sbjct: 14 GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA--------KGGNAQ---------A 56
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
ACD+ + V A G +D+ +NNAG +K F P + E++++ NL G+
Sbjct: 57 FACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGA 115
Query: 143 ILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ + M ++ G I N+ A GSS AVY + K GL ++ +E R
Sbjct: 116 LHMHHAVLPGMVER-GAGRIVNIASDAARVGSSG--EAVYAACKGGLVAFSKTMAREHAR 172
Query: 202 SKVGVHTASPGMVLTDLL 219
+ V+ PG T LL
Sbjct: 173 HGITVNVVCPGPTDTALL 190
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 5e-12
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 26/202 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG+A+A + G R+ +A + E T+ L E AGG
Sbjct: 11 GLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE--------AGG---------DGFY 53
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ---IVSTNL 139
CDV + + + L+ ++G ID+ +NNAG G F +E ++ NL
Sbjct: 54 QRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGF----FEELSLEDWDWQIAINL 109
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+G + + + + + Q K G I N+ + +G P + Y K G+ L +L E
Sbjct: 110 MGVVKGCKAFLPLFKRQ-KSGRIVNI-ASMAGLMQGPAMSSYNVAKAGVVALSETLLVEL 167
Query: 200 KRSKVGVHTASPGMVLTDLLLS 221
++GVH P T+LL S
Sbjct: 168 ADDEIGVHVVCPSFFQTNLLDS 189
|
Length = 270 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 5e-12
Identities = 55/219 (25%), Positives = 85/219 (38%), Gaps = 44/219 (20%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+GK ARE G V++A R+ E E+++ +AK
Sbjct: 9 ANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETG---------------NAK 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V I D+ A V++ + + F +DI INNAG P + T + E + N
Sbjct: 54 VEVIQLDLSSLASVRQFAEEFLARFPRLDILINNAGI---MAPPRRLTKDGFELQFAVNY 110
Query: 140 VGSILCTREAMRVMRDQP------------KGGHI-FNMDGAGSGGSSTPLTAVYGSTK- 185
+G L T + V++ + G I FN + +P YG +K
Sbjct: 111 LGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSP-YKAYGQSKL 169
Query: 186 -CGL--RQLQASLFKESKRSKVGVHTAS--PGMVLTDLL 219
L R+L L GV + PG+V T+LL
Sbjct: 170 ANILFTRELARRL------EGTGVTVNALHPGVVRTELL 202
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 7e-12
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST G+G +AR +G +V+ + V K G+ K
Sbjct: 10 STSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAA-KHGV--------------K 54
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V D+ +PA ++ + +A +FG +DI +NNAG + P+ F E+ + I++ NL
Sbjct: 55 VLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGI-QHVAPIEDFPTEKWDAIIALNL 113
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
TR A+ M+ Q G I N+ G ++ + Y + K G+ L + E+
Sbjct: 114 SAVFHTTRLALPHMKKQ-GWGRIINIASV-HGLVASANKSAYVAAKHGVVGLTKVVALET 171
Query: 200 KRSKVGVHTASPGMVLTDL 218
+ V + PG VLT L
Sbjct: 172 AGTGVTCNAICPGWVLTPL 190
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 7e-12
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 24/191 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ +A G RVV+ RS EL + + AAGG +
Sbjct: 19 GIGRGVALRAAAEGARVVLVDRS---------ELVHEVAAELRAAGG---------EALA 60
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ D+ A Q AV FG ID+ INN G KP ++ E+IE + +L +
Sbjct: 61 LTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPT 120
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ C R + M Q GG I N+ + G + P Y + K G+ L ASL E
Sbjct: 121 LWCCRAVLPHMLAQ-GGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFEYAE 175
Query: 202 SKVGVHTASPG 212
+ V+ +PG
Sbjct: 176 HGIRVNAVAPG 186
|
Length = 260 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 8e-12
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G+A A G V+ +E+V TV +++ N GG +K V
Sbjct: 14 ASTGIGQASAIALAQEGAYVLAVD-IAEAVSETVDKIKSN--------GGKAKAYHV--- 61
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
D+ + V+ ++ +FG +D+ NNAG + + ++ + ++I++ ++
Sbjct: 62 ------DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDM 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ L T+ + +M +Q GG I N + SG ++ + Y + K + S+ E
Sbjct: 116 RGTFLMTKMLLPLMMEQ--GGSIIN-TSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEY 172
Query: 200 KRSKVGVHTASPGMVLTDLL--LSGST 224
R + + +PG + T L+ L+G++
Sbjct: 173 GRDGIRANAIAPGTIETPLVDKLTGTS 199
|
Length = 272 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 3e-11
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 36/208 (17%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G ALA+ FL G+ V++ R+ EE L E K +
Sbjct: 16 GIGLALAKRFLELGNTVIICGRN-----------EERLAEA---------KAENPE-IHT 54
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-----IEQIVST 137
CDV + ++L + E+ ++++ INNAG + T E EQ ++T
Sbjct: 55 EVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNE----DLTGAEDLLDDAEQEIAT 110
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLRQLQASL 195
NL+ I T + + QP+ I N+ SG + P+ T VY +TK + +L
Sbjct: 111 NLLAPIRLTALLLPHLLRQPE-ATIINVS---SGLAFVPMASTPVYCATKAAIHSYTLAL 166
Query: 196 FKESKRSKVGVHTASPGMVLTDLLLSGS 223
++ K + V V +P +V T + +
Sbjct: 167 REQLKDTSVEVIELAPPLVDTTEGNTQA 194
|
Length = 245 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 3e-11
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G A F G R+ + R +E LEE + + AG S KK L+
Sbjct: 11 SSSGIGAGTAILFARLGARLALTGRDAE-------RLEETRQS-CLQAGVSEKKILL--- 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D+ E ++ + + +FG +DI +NNAG EE +++++ NL
Sbjct: 60 ---VVADLTEEEGQDRIISTTLAKFGRLDILVNNAGIL-AKGGGEDQDIEEYDKVMNLNL 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
I T+ A+ + G I N+ +GG S P Y +K L Q E
Sbjct: 116 RAVIYLTKLAVPHLIKTK--GEIVNVSSV-AGGRSFPGVLYYCISKAALDQFTRCTALEL 172
Query: 200 KRSKVGVHTASPGMVLTDL 218
V V++ SPG+++T
Sbjct: 173 APKGVRVNSVSPGVIVTGF 191
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 4e-11
Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 26/196 (13%)
Query: 23 GLGKALAREFLLSGDRVVV------ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 76
GLG+A A F G +VVV S +S ++E G A
Sbjct: 16 GLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKAVANYD----- 70
Query: 77 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 136
V D +K+ A++ FG +DI +NNAG + + + + E+ + ++
Sbjct: 71 ---------SV---EDGEKIVKTAIDAFGRVDILVNNAGILRD-RSFAKMSEEDWDLVMR 117
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
+L GS TR A MR Q G I AG G+ A Y + K GL L +L
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFG--QANYSAAKLGLLGLSNTLA 175
Query: 197 KESKRSKVGVHTASPG 212
E + + +T +P
Sbjct: 176 IEGAKYNITCNTIAPA 191
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 4e-11
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 26/197 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+T G G+ + R F+ G +V+ R E ++ EL +NL
Sbjct: 8 ATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYI----------------- 50
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
DV A ++++ E+ +ID+ +NNAG G +P + + E+ E ++ TN
Sbjct: 51 ---AQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNN 107
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLRQLQASLFK 197
G + TR + M ++ GHI N+ GS S P VYG+TK +RQ +L
Sbjct: 108 KGLVYMTRAVLPGMVERNH-GHIINI---GSTAGSWPYAGGNVYGATKAFVRQFSLNLRT 163
Query: 198 ESKRSKVGVHTASPGMV 214
+ + V V PG+V
Sbjct: 164 DLHGTAVRVTDIEPGLV 180
|
Length = 248 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 4e-11
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+++ R F G +V + + L +N+ + + GG H
Sbjct: 29 GIGESIVRLFHKHGAKVCIVDLQDD--------LGQNVCDSL---GGEPNVCFFH----- 72
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIVSTNLVG 141
CDV DV + +F V++FG++DI +NNAG P ++ E E++ N+ G
Sbjct: 73 --CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKG 130
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
L + A R+M KG + A + G P Y +K + L S+ E +
Sbjct: 131 VFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP--HAYTGSKHAVLGLTRSVAAELGK 188
Query: 202 SKVGVHTASPGMVLTDLLLS 221
+ V+ SP V T L L+
Sbjct: 189 HGIRVNCVSPYAVPTALALA 208
|
Length = 280 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 9e-11
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G G A AR G ++V+A +++ V EL A G A+V G
Sbjct: 17 GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR--------AQG---------AEVLG 59
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + A V+ L++ A+ FG++ + NNAG G + + + + E ++ NL G
Sbjct: 60 VRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG-GLVWENSLADWEWVLGVNLWGV 118
Query: 143 ILCTREAMRVM-----RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
I R +M +D GHI N + +G + P +Y +K + L +L++
Sbjct: 119 IHGVRAFTPLMLAAAEKDPAYEGHIVNT-ASMAGLLAPPAMGIYNVSKHAVVSLTETLYQ 177
Query: 198 ESK--RSKVGVHTASPGMVLT 216
+ +VG P V T
Sbjct: 178 DLSLVTDQVGASVLCPYFVPT 198
|
Length = 287 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 1e-10
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 24/200 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A G + + R ++ + TV + A GG+ V A
Sbjct: 11 GIGRATALRLAAQGAELFLTDRDADGLAQTVADAR--------ALGGT-----VPEHRAL 57
Query: 83 IACDVCEPADVQKLSNFA---VNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
D+ +D ++ FA GS+D+ +N AG + + + + T+E+ ++V NL
Sbjct: 58 ---DI---SDYDAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNL 110
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+G I + M +GGH+ N+ A +G + P A Y ++K GLR L L +
Sbjct: 111 MGPIHVIETFVPPMVAAGRGGHLVNVSSA-AGLVALPWHAAYSASKFGLRGLSEVLRFDL 169
Query: 200 KRSKVGVHTASPGMVLTDLL 219
R +GV PG V T L+
Sbjct: 170 ARHGIGVSVVVPGAVKTPLV 189
|
Length = 272 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 1e-10
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG A A G ++ + + E + L E + A+V
Sbjct: 14 GLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPD---------------AEVLL 58
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
I DV + A V+ + V +FG ID + NNAG F +E +++VS NL G
Sbjct: 59 IKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGV 118
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAG---SGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ ++VMR+Q G I N G G+ + Y + K G+ L + E
Sbjct: 119 FYGLEKVLKVMREQ-GSGMIVNTASVGGIRGVGNQSG----YAAAKHGVVGLTRNSAVEY 173
Query: 200 KRSKVGVHTASPGMVLT 216
+ + ++ +PG +LT
Sbjct: 174 GQYGIRINAIAPGAILT 190
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 1e-10
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 28/197 (14%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+A A G RVV A+R L+ E G
Sbjct: 19 SGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGE----TGCE----------- 56
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV + A ++ A+ G+ D +N AG + L T E +++++ N G
Sbjct: 57 PLRLDVGDDAAIRA----ALAAAGAFDGLVNCAGIASL-ESALDMTAEGFDRVMAVNARG 111
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ L R R M +GG I N+ P Y ++K L + L E
Sbjct: 112 AALVARHVARAMIAAGRGGSIVNVSSQA-ALVGLPDHLAYCASKAALDAITRVLCVELGP 170
Query: 202 SKVGVHTASPGMVLTDL 218
+ V++ +P + LT +
Sbjct: 171 HGIRVNSVNPTVTLTPM 187
|
Length = 245 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 101 VNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG 160
+ G ID+ +NNAG P L +E +I + ++ G+ LC++ A R M Q +GG
Sbjct: 75 IQRLGRIDVLVNNAGAMTK-APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGG 133
Query: 161 HIFNMDGAGSGGSSTPL--TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216
I N+ S TPL + Y + K L L ++ E + V+ +PG + T
Sbjct: 134 RIINIT---SVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIAT 188
|
Length = 256 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 2e-10
Identities = 61/225 (27%), Positives = 88/225 (39%), Gaps = 35/225 (15%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A AR G VVV E+ + E+ GG
Sbjct: 18 GIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----------GGLF----------- 55
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS-TNLVG 141
+ DV + V L + A +GS+DI NNAG + + T + Q V NL
Sbjct: 56 VPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTS 115
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
LC + A+ M Q KG I GS+T + Y ++K G+ + L + R
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQIS-YTASKGGVLAMSRELGVQFAR 174
Query: 202 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246
+ V+ PG V T LL +++F + PE AR LV
Sbjct: 175 QGIRVNALCPGPVNTPLL--------QELF---AKDPERAARRLV 208
|
Length = 255 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 2e-10
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 31/198 (15%)
Query: 22 RGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RG+G+A + L G +V A+R ESV + +V
Sbjct: 16 RGIGRAFVEQLLARGAAKVYAAARDPESV------------------------TDLGPRV 51
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ DV +PA V + A + I +NNAG + LL+ + + + TN
Sbjct: 52 VPLQLDVTDPASVAAAAEAA----SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYF 107
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G + R V+ GG I N+ S + P Y ++K L +L E
Sbjct: 108 GPLAMARAFAPVLAANG-GGAIVNVLSVLS-WVNFPNLGTYSASKAAAWSLTQALRAELA 165
Query: 201 RSKVGVHTASPGMVLTDL 218
V PG + TD+
Sbjct: 166 PQGTRVLGVHPGPIDTDM 183
|
Length = 238 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 20/190 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG+ LA +G VV+A+R T L+E E + G
Sbjct: 16 GLGRTLAVRAARAGADVVLAAR-------TAERLDEVAAE-IDDLGRR---------ALA 58
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ D+ + L A+ FG +D +NNA KPL ++ N++G+
Sbjct: 59 VPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGT 118
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+ T+ + GG I ++ S P Y K L SL E
Sbjct: 119 LRLTQAFTPALA--ESGGSIVMINSM-VLRHSQPKYGAYKMAKGALLAASQSLATELGPQ 175
Query: 203 KVGVHTASPG 212
+ V++ +PG
Sbjct: 176 GIRVNSVAPG 185
|
Length = 258 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 3e-10
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 18/198 (9%)
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
KV DV + A+V+ + V +FG +D+ + NAG + + + E+ + ++ N
Sbjct: 66 KVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGV-LSYGRSWELSEEQWDTVLDIN 124
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L G + + M ++ GG I + + +G + P A Y + K GL L +L E
Sbjct: 125 LTGVWRTCKAVVPHMIERGNGGSII-ITSSVAGLKALPGLAHYAAAKHGLVGLTKTLANE 183
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKA 258
+ V++ P V T + I + M + PE AR +P
Sbjct: 184 LAEYGIRVNSIHPYSVDTPM------IAPEAMREAFLKYPE-AARAFMP--------ALP 228
Query: 259 INYLTPPRILLALVTAWL 276
++ PP + V WL
Sbjct: 229 VSGFVPPEDVADAV-LWL 245
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 3e-10
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RGLG A+AR F G RVVV S TE E + AA + + A
Sbjct: 8 ASRGLGAAIARSFAREGARVVVNYYRS-------TESAEAV-----AAEAGERAIAIQA- 54
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE-----QI 134
DV + VQ + A N FG +D +NNA + F P + T + I+ Q
Sbjct: 55 ------DVRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQ 108
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV--YGSTKCGLRQLQ 192
+ + G++ + + +++ G + N+ G+ P+ Y + K L
Sbjct: 109 LEGAVKGALNLLQAVLPDFKER-GSGRVINI---GTNLFQNPVVPYHDYTTAKAALLGFT 164
Query: 193 ASLFKESKRSKVGVHTASPGMV 214
++ KE + V+ S G++
Sbjct: 165 RNMAKELGPYGITVNMVSGGLL 186
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 3e-10
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A EF G RVV+ +R V + A G V G
Sbjct: 17 GIGLATGTEFARRGARVVLGDVDKPGLRQAV--------NHLRAEG---------FDVHG 59
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ CDV +V L++ A G +D+ +NAG G P+++ T+++ ++ +L GS
Sbjct: 60 VMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVG-GPIVEMTHDDWRWVIDVDLWGS 118
Query: 143 ILCTREAMRVMRDQPKGGHI-FNMDGAG---SGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
I + + +Q GGH+ F AG + G YG K G+ L +L +E
Sbjct: 119 IHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGA-----YGVAKYGVVGLAETLARE 173
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQ 226
+GV P +V T+L+ + I+
Sbjct: 174 VTADGIGVSVLCPMVVETNLVANSERIR 201
|
Length = 275 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 4e-10
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 23/188 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A +F G VV +R + L + + + + AGG + A
Sbjct: 51 GIGEAAAEQFARRGATVVAVARRED--------LLDAVADRITRAGGDA-----MA---- 93
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN--EEIEQIVSTNLV 140
+ CD+ + V L G +DI INNAG + +PL + + ++E+ + N
Sbjct: 94 VPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIR-RPLAESLDRWHDVERTMVLNYY 152
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ R M ++ GHI N+ G ++PL +VY ++K L + + E++
Sbjct: 153 APLRLIRGLAPGMLER-GDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVI--ETE 209
Query: 201 RSKVGVHT 208
GVH+
Sbjct: 210 WGDRGVHS 217
|
Length = 293 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 4e-10
Identities = 60/268 (22%), Positives = 99/268 (36%), Gaps = 42/268 (15%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A F G RV + + EL G N +
Sbjct: 12 GIGRATALLFAAEGWRVGAYDINEAGLAALAAEL-----------GAG---NAWTGAL-- 55
Query: 83 IACDVCEPADVQK-LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + A L++FA G +D+ NNAG +G P E ++++ N+ G
Sbjct: 56 ---DVTDRAAWDAALADFAAATGGRLDVLFNNAGILRG-GPFEDIPLEAHDRVIDINVKG 111
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ A+ ++ P G + N A S P AVY +TK +R L +L E +R
Sbjct: 112 VLNGAHAALPYLKATP-GARVINTSSA-SAIYGQPGLAVYSATKFAVRGLTEALDLEWRR 169
Query: 202 SKVGVHTASPGMVLTDLLLSGS------TIQNKQMFNIICELPETVARTLVPRIRVVKGS 255
+ V P V T +L S + + + PE VA + ++
Sbjct: 170 HGIRVADVMPLFVDTAMLDGTSNEVDAGSTKR-LGVRLT---PEDVAEAVWAAVQ----H 221
Query: 256 GKAINYLTPPRILL-----ALVTAWLRR 278
+++ + L L ++RR
Sbjct: 222 PTRLHWPVGKQAKLLAFLARLSPGFVRR 249
|
Length = 260 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 4e-10
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+GK +A F +G VVV+ ++++ V E+++ GG +
Sbjct: 22 GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ--------LGG---------QAFA 64
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
CD+ ++ L++FA+++ G +DI +NNAG G KP + + N+
Sbjct: 65 CRCDITSEQELSALADFALSKLGKVDILVNNAG-GGGPKP-FDMPMADFRRAYELNVFSF 122
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
++ M ++ GG I + + + Y S+K L ++ +
Sbjct: 123 FHLSQLVAPEM-EKNGGGVILTITSM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEK 180
Query: 203 KVGVHTASPGMVLTDLLLS 221
+ V+ +PG +LTD L S
Sbjct: 181 NIRVNGIAPGAILTDALKS 199
|
Length = 255 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 5e-10
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G A+A+ + +G +V + E V + E G+ +
Sbjct: 18 ASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE---LGI--------------E 60
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G CDV + VQ + + E G IDI +NNAG K P+L+ + E+ Q++ +L
Sbjct: 61 AHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKR-IPMLEMSAEDFRQVIDIDL 119
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSG-GSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ ++ + M + G I N+ S G T + Y + K GL+ L ++ E
Sbjct: 120 NAPFIVSKAVIPSMIKK-GHGKIINICSMMSELGRET--VSAYAAAKGGLKMLTKNIASE 176
Query: 199 SKRSKVGVHTASPGMVLT 216
+ + + PG + T
Sbjct: 177 YGEANIQCNGIGPGYIAT 194
|
Length = 265 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 6e-10
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 33/199 (16%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ALAR FL +GDRV+ + ++ L + A+
Sbjct: 13 GIGQALARRFLAAGDRVLALDIDAAALAAFADALGD-------------------ARFVP 53
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI-VSTNLVG 141
+ACD+ + A + A E G +D+ + NAG + L T + + NL
Sbjct: 54 VACDLTDAASLAAALANAAAERGPVDVLVANAGAARAAS--LHDTTPASWRADNALNLEA 111
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV----YGSTKCGLRQLQASLFK 197
+ LC + M + +G + N+ GS + A+ Y + K GL L
Sbjct: 112 AYLCVEAVLEGMLKRSRGA-VVNI------GSVNGMAALGHPAYSAAKAGLIHYTKLLAV 164
Query: 198 ESKRSKVGVHTASPGMVLT 216
E R + + +PG V T
Sbjct: 165 EYGRFGIRANAVAPGTVKT 183
|
Length = 257 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 8e-10
Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 24/193 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G A+AR +G RV R+ E + V +L A
Sbjct: 8 QGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRY-----------------GYPFA 50
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + A V ++ E+G ID+ +N AG + + ++E+ + + N G
Sbjct: 51 TYKLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILR-LGAIDSLSDEDWQATFAVNTFG 109
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES 199
++ M+ + + G I + GS ++ P A Y ++K L L L E
Sbjct: 110 VFNVSQAVSPRMKRR-RSGAIVTV---GSNAANVPRMGMAAYAASKAALTMLTKCLGLEL 165
Query: 200 KRSKVGVHTASPG 212
+ + SPG
Sbjct: 166 APYGIRCNVVSPG 178
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 1e-09
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 31/199 (15%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G+A + +G RVV SR+ + V E
Sbjct: 17 KGIGRATVKALAKAGARVVAVSRTQADLDSLVRE------------------------CP 52
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
GI + +D + A+ G +D+ +NNA +P L+ T E ++ N+
Sbjct: 53 GIEPVCVDLSDWDA-TEEALGSVGPVDLLVNNAAVAI-LQPFLEVTKEAFDRSFDVNVRA 110
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES 199
I ++ R M + G I N+ S S LT VY STK L L + E
Sbjct: 111 VIHVSQIVARGMIARGVPGSIVNVS---SQASQRALTNHTVYCSTKAALDMLTKVMALEL 167
Query: 200 KRSKVGVHTASPGMVLTDL 218
K+ V++ +P +V+TD+
Sbjct: 168 GPHKIRVNSVNPTVVMTDM 186
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 48/178 (26%), Positives = 68/178 (38%), Gaps = 48/178 (26%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A AR FL G +V + + +L N H
Sbjct: 16 GIGLAQARAFLAQGAQVYGVDKQDKP------DLSGNF----------------HFLQL- 52
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
D+ + + + S+DI N AG +KPLL + EE + I TNL +
Sbjct: 53 ---DLSDDLEP------LFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTST 103
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDG-----AGSGGSSTPLTAVYGSTKCGL----RQL 191
L TR + M ++ K G I NM AG GG A Y ++K L +QL
Sbjct: 104 FLLTRAYLPQMLER-KSGIIINMCSIASFVAGGGG------AAYTASKHALAGFTKQL 154
|
Length = 235 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 1e-09
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 27/194 (13%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ALA F +G V +R +E V E + AAG
Sbjct: 12 GIGRALADAFKAAGYEVWATARKAEDV------------EALAAAG-----------FTA 48
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + A + +L+ E G +D+ INNAG PLL E + + TN+
Sbjct: 49 VQLDVNDGAALARLAEELEAEHGGLDVLINNAGYG-AMGPLLDGGVEAMRRQFETNVFAV 107
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+ TR ++R G + N+ G+ SG TP Y ++K + L +L E
Sbjct: 108 VGVTRALFPLLRR--SRGLVVNI-GSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPF 164
Query: 203 KVGVHTASPGMVLT 216
V V PG + +
Sbjct: 165 GVQVMEVQPGAIAS 178
|
Length = 274 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+GKA+A+ F G VV+ R+ E + E+E+ G +V
Sbjct: 12 GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PG---------------QVLT 54
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEIEQIVSTNLVG 141
+ DV P DVQK+ +FG ID INNA N F P + ++ L G
Sbjct: 55 VQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGN--FICPAEDLSVNGWNSVIDIVLNG 112
Query: 142 SILCTREAMRVMRDQPKGGHIFNMD-----GAGSG 171
+ C++ + ++ G+I NM AG G
Sbjct: 113 TFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG 147
|
Length = 252 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
KV + D+ +P +K+ A+ EFG IDI +NNAGT + PLL++ +E+ ++ N
Sbjct: 64 KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRR-APLLEYKDEDWNAVMDIN 122
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLF 196
L ++ +VM Q G I N+ S GG P Y ++K G+ L +
Sbjct: 123 LNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSFQGGKFVP---AYTASKHGVAGLTKAFA 178
Query: 197 KESKRSKVGVHTASPGMVLT 216
E + V+ +PG + T
Sbjct: 179 NELAAYNIQVNAIAPGYIKT 198
|
Length = 258 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-09
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A+ F G RVVVA R +E+ +AAGG +
Sbjct: 16 GIGRATAKLFAREGARVVVADRDAEAAERVAAA---------IAAGG---------RAFA 57
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
DV V+ L +F +G +D+ +NNAG G ++ + + ++ N+ G
Sbjct: 58 RQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCG-GTVVTTDEADWDAVMRVNVGGV 116
Query: 143 ILCTREAMRVMRDQPKGGHIFNM--DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
L + A+ +M+ Q GG I N A +GG A Y ++K + L ++ +
Sbjct: 117 FLWAKYAIPIMQRQ-GGGSIVNTASQLALAGG---RGRAAYVASKGAIASLTRAMALDHA 172
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ V+ +PG + T
Sbjct: 173 TDGIRVNAVAPGTIDTPYF 191
|
Length = 252 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-09
Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 31/202 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G+A+AR L +G V+ + L
Sbjct: 6 AAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRL--------------------- 44
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
DV + A V+++ + + E G ID +N AG + + E+ EQ + N+
Sbjct: 45 ---TPLDVADAAAVREVCSRLLAEHGPIDALVNCAGVLR-PGATDPLSTEDWEQTFAVNV 100
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFK 197
G + M+D+ + G I + S + P A YG++K L L L
Sbjct: 101 TGVFNLLQAVAPHMKDR-RTGAIVTV---ASNAAHVPRISMAAYGASKAALASLSKCLGL 156
Query: 198 ESKRSKVGVHTASPGMVLTDLL 219
E V + SPG T +
Sbjct: 157 ELAPYGVRCNVVSPGSTDTAMQ 178
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 3e-09
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 21/196 (10%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G A+A+ + G +V + + E+ + +L + GG K
Sbjct: 12 QGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK--------DGG---------KAI 54
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV + V V+ FG +++ +NNAG P+ T E+ +++ + N+ G
Sbjct: 55 AVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPT-TPIETITEEQFDKVYNINVGG 113
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
I + A + GG I N AG G+ P AVY STK +R L + ++
Sbjct: 114 VIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN--PELAVYSSTKFAVRGLTQTAARDLA 171
Query: 201 RSKVGVHTASPGMVLT 216
+ V+ +PG+V T
Sbjct: 172 SEGITVNAYAPGIVKT 187
|
Length = 256 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 3e-09
Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 22/203 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ AR G VV+A + E+ E+ N + G +
Sbjct: 425 GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEI--NGQFGA-------------GRAVA 469
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + V+ +G +DI +NNAG P + T +E + + G
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS-SPFEETTLQEWQLNLDILATGY 528
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
L REA R MR+Q GG+I + + + + Y + K L L E
Sbjct: 529 FLVAREAFRQMREQGLGGNIV-FIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTY 587
Query: 203 KVGVHTASPGMVLTDLLLSGSTI 225
+ V+T +P D +L GS I
Sbjct: 588 GIRVNTVNP-----DAVLQGSGI 605
|
Length = 676 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 3e-09
Identities = 55/204 (26%), Positives = 81/204 (39%), Gaps = 31/204 (15%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ G G E G V+ R+ E +ENL + KV
Sbjct: 12 SSGFGLLTTLELAKKGYLVIATMRNPEK--------QENLLSQATQLNLQQ-----NIKV 58
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTNL 139
DV + + + E G ID+ +NNAG N GF + + EE + TN+
Sbjct: 59 --QQLDVTDQNSIHNFQLV-LKEIGRIDLLVNNAGYANGGF--VEEIPVEEYRKQFETNV 113
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+I T+ + MR Q K G I N+ + SG P + Y S+K L F ES
Sbjct: 114 FGAISVTQAVLPYMRKQ-KSGKIINI-SSISGRVGFPGLSPYVSSKYALEG-----FSES 166
Query: 200 KRSKV---GVHTA--SPGMVLTDL 218
R ++ G+ A PG T++
Sbjct: 167 LRLELKPFGIDVALIEPGSYNTNI 190
|
Length = 280 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 4e-09
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG+A A G RV + R + + T+ G+ A ++
Sbjct: 17 GGLGRATAAWLAARGARVALIGRGAAPLSQTLP--------GVPADAL---------RIG 59
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEEIEQIVSTNL 139
GI D+ +P ++ + +FG +D +N AG F + + +++ N+
Sbjct: 60 GI--DLVDPQAARRAVDEVNRQFGRLDALVNIAG---AFVWGTIADGDADTWDRMYGVNV 114
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
++ ++ A+ + GG I N+ GAG+ + P Y + K G+ +L +L E
Sbjct: 115 KTTLNASKAALPALT-ASGGGRIVNI-GAGAALKAGPGMGAYAAAKAGVARLTEALAAEL 172
Query: 200 KRSKVGVHTASPGMVLT 216
+ V+ P ++ T
Sbjct: 173 LDRGITVNAVLPSIIDT 189
|
Length = 239 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 4e-09
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 44/206 (21%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T+G+G A L +G RVV +RS ++L EG V
Sbjct: 18 TKGIGAATVARLLEAGARVVTTARSRP----------DDLPEG----------------V 51
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK----GFKPLLQFTNEEIEQIVS 136
+A D+ ++ + G +DI ++ G + GF L T+EE + ++
Sbjct: 52 EFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAAL---TDEEWQDELN 108
Query: 137 TNLVGSILCTREAMRVMRDQPKGG--HIFNMDGAGSGGSSTPL---TAVYGSTKCGLRQL 191
NL+ ++ R + M + G H+ S PL T Y + K L
Sbjct: 109 LNLLAAVRLDRALLPGMIARGSGVIIHV------TSIQRRLPLPESTTAYAAAKAALSTY 162
Query: 192 QASLFKESKRSKVGVHTASPGMVLTD 217
SL KE V V+T SPG + T+
Sbjct: 163 SKSLSKEVAPKGVRVNTVSPGWIETE 188
|
Length = 260 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 5e-09
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 18/205 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RG+G+A A G V V + + V L + AGG K
Sbjct: 9 GSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL-------ITQAGG---------K 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D+ + V + + +NNAG + T E I +++STN+
Sbjct: 53 AFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNV 112
Query: 140 VGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
G LC REA++ M + GG I N+ A S + Y ++K + L L
Sbjct: 113 TGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSL 172
Query: 198 ESKRSKVGVHTASPGMVLTDLLLSG 222
E + V+ PG + T++ SG
Sbjct: 173 EVAAQGIRVNCVRPGFIYTEMHASG 197
|
Length = 247 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 5e-09
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 26/203 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG A+ +G +VV+ASR E ++ E+E A GG++ H
Sbjct: 20 GLGARFAQVLAQAGAKVVLASRRVERLKELRAEIE--------AEGGAA-----HV---- 62
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
++ DV + ++ A E G+IDI +NN+G + K L+ T + + + TN G+
Sbjct: 63 VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK-LVDVTPADFDFVFDTNTRGA 121
Query: 143 ILCTREAMR--VMR-----DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
+E + + R + GG I N+ + +G P +Y +K + + ++
Sbjct: 122 FFVAQEVAKRMIARAKGAGNTKPGGRIINI-ASVAGLRVLPQIGLYCMSKAAVVHMTRAM 180
Query: 196 FKESKRSKVGVHTASPGMVLTDL 218
E R + V+ PG + T++
Sbjct: 181 ALEWGRHGINVNAICPGYIDTEI 203
|
Length = 258 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 7e-09
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 20 STRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
T+GLG A+AR F G +V+ R++E ELE A
Sbjct: 14 GTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-----------------GA 56
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVST 137
K + D+ + D +++ A FG +D +N AG T++G +L + E ++ +
Sbjct: 57 KAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRG--TILDTSPELFDRHFAV 114
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 191
N+ +EA+++MR + G I N+ + G P A Y ++K L L
Sbjct: 115 NVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-PFLAAYCASKGALATL 167
|
Length = 260 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 1e-08
Identities = 47/210 (22%), Positives = 77/210 (36%), Gaps = 34/210 (16%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG A L G +VV+ + E K G
Sbjct: 13 GLGLATVERLLAQGAKVVILDLPNS-------PGETVAKLG--------------DNCRF 51
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-----GFKPLLQFTNEEIEQIVST 137
+ DV DV+ A +FG +DI +N AG K + E +++++
Sbjct: 52 VPVDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINV 111
Query: 138 NLVGSILCTREAMRVM-RDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 191
NL+G+ R A M +++P +G I A G A Y ++K G+ +
Sbjct: 112 NLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQ--IGQAAYSASKGGIVGM 169
Query: 192 QASLFKESKRSKVGVHTASPGMVLTDLLLS 221
+ ++ + V T +PG+ T LL
Sbjct: 170 TLPIARDLAPQGIRVVTIAPGLFDTPLLAG 199
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 1e-08
Identities = 43/197 (21%), Positives = 77/197 (39%), Gaps = 22/197 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G LAR G ++ + + EL +V
Sbjct: 19 RGIGAELARRLHARGAKLALVDLEEAELAALAAELGG------------------DDRVL 60
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV + A +Q + AV FG ID+ + NAG G + Q + +++ NL+G
Sbjct: 61 TVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQVDPDAFRRVIDVNLLG 119
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
R + + + + G++ + + ++ P A Y ++K G+ +L E
Sbjct: 120 VFHTVRATLPALIE--RRGYVLQVSSLAAFAAA-PGMAAYCASKAGVEAFANALRLEVAH 176
Query: 202 SKVGVHTASPGMVLTDL 218
V V +A + TDL
Sbjct: 177 HGVTVGSAYLSWIDTDL 193
|
Length = 296 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 2e-08
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G+ +AR F G +++ S E + +L + L +
Sbjct: 14 ALQGIGEGIARVFARHGANLILLDISPE-----IEKLADELCGR-------------GHR 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV +PA V A + G IDI +NNAG + L ++E+ + + N+
Sbjct: 56 CTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCR-LGSFLDMSDEDRDFHIDINI 114
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G T+ + M + K G I M + P Y TK + L SL E
Sbjct: 115 KGVWNVTKAVLPEMIAR-KDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEY 173
Query: 200 KRSKVGVHTASPGMVLTDL 218
+S + V+ PG V T +
Sbjct: 174 AQSGIRVNAICPGYVRTPM 192
|
Length = 263 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 2e-08
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 25/198 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG+ +A +G +V A RS + T ++ + A G +
Sbjct: 15 TGLGQGIAVGLAEAGADIVGAGRSE----PSET------QQQVEALGR---------RFL 55
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ D+ + ++ L + AV EFG IDI +NNAG + +F+ ++ + +++ NL
Sbjct: 56 SLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRAD-AEEFSEKDWDDVMNVNLKS 114
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKES 199
T+ A + Q +GG I N+ S GG P Y ++K + L L E
Sbjct: 115 VFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVP---SYTASKHAVAGLTKLLANEW 171
Query: 200 KRSKVGVHTASPGMVLTD 217
+ V+ +PG + T+
Sbjct: 172 AAKGINVNAIAPGYMATN 189
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 2e-08
Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 32/202 (15%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG+A+ F+ G RV V +S+ + + + AA G V G
Sbjct: 16 GLGRAIVDRFVAEGARVAVLDKSAAGL------------QELEAAHG--------DAVVG 55
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI----EQIVSTN 138
+ DV D ++ V FG ID I NAG L+ ++ I +++ N
Sbjct: 56 VEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHIN 115
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SGGSSTPLTAVYGSTKCGLRQLQASLF 196
+ G +L + A+ + +G IF + AG G TA + +++L L
Sbjct: 116 VKGYLLAVKAALPALV-ASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFEL- 173
Query: 197 KESKRSKVGVHTASPGMVLTDL 218
V V+ +PG + +DL
Sbjct: 174 ----APYVRVNGVAPGGMSSDL 191
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 3e-08
Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 21/201 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A+A F G V + E + E K+ + G K
Sbjct: 37 GIGRAVAIAFAREGADVAINYLPEE------EDDAEETKKLIEEEGR---------KCLL 81
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
I D+ + + + L V EFG +DI +NNA + + T E++E+ TN+
Sbjct: 82 IPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSM 141
Query: 143 ILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
T+ A+ + KG I N GS L Y +TK + L +
Sbjct: 142 FYLTKAALPHL---KKGSSIINTTSVTAYKGSPHLLD--YAATKGAIVAFTRGLSLQLAE 196
Query: 202 SKVGVHTASPGMVLTDLLLSG 222
+ V+ +PG + T L+ S
Sbjct: 197 KGIRVNAVAPGPIWTPLIPSS 217
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 3e-08
Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 34/232 (14%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ G+GKA A F +G + + +RS +++ EL K
Sbjct: 15 SSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS-----------------TGVKA 57
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNEEIEQIVST 137
A + D+ P + + +FG D+ INNAG T PLL+ + + ++
Sbjct: 58 AAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTG----PLLEMPLSDWQWVIQL 113
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
NL C + MR + GG I N+ + + ++ P Y +K L L +
Sbjct: 114 NLTSVFQCCSAVLPGMRAR-GGGLIINV-SSIAARNAFPQWGAYCVSKAALAAFTKCLAE 171
Query: 198 ESKRSKVGVHTASPGMVLTDLLLS---GSTIQNKQMFNIICELPETVARTLV 246
E + + V T + G V T L + + M + PE VA+T++
Sbjct: 172 EERSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLS-----PEQVAQTIL 218
|
Length = 241 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 5e-08
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 24/196 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+ +G+A+A G RVVV SE E + LK+ + A
Sbjct: 10 KRIGRAIAEALAAEGYRVVVHYNRSE------AEAQR-LKDELNALRN---------SAV 53
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEEIEQIVSTNL 139
+ D+ + A L A FG D+ +NNA F PL Q + + ++ NL
Sbjct: 54 LVQADLSDFAACADLVAAAFRAFGRCDVLVNNASA---FYPTPLGQGSEDAWAELFGINL 110
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
L + R + G I N+ A + T A Y +K L L S E
Sbjct: 111 KAPYLLIQAFARRLAGSRN-GSIINIIDAMTDRPLTGYFA-YCMSKAALEGLTRSAALEL 168
Query: 200 KRSKVGVHTASPGMVL 215
+ V+ +PG++L
Sbjct: 169 A-PNIRVNGIAPGLIL 183
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 6e-08
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 55/213 (25%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMMAAGGSSKK 73
+RG+G A+A G +V+A++++E ++ E+E AAGG
Sbjct: 15 SRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE--------AAGG---- 62
Query: 74 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE--- 130
+ + DV + V AV FG IDI +NNA + T E
Sbjct: 63 -----QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASA-------INLTGTEDTP 110
Query: 131 ------IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF------NMDGAGSGGSSTPLT 178
++QI N+ G+ L ++ + ++ HI N+D +
Sbjct: 111 MKRFDLMQQI---NVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWFAPHTAYTM 166
Query: 179 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASP 211
A YG + C L L +E + + V+ P
Sbjct: 167 AKYGMSLCTL-----GLAEEFRDDGIAVNALWP 194
|
Length = 273 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 7e-08
Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G+ +A+ FL +G RV++++R +E+ EL S A
Sbjct: 15 SRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL--------------SAYGECIA-- 58
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I D+ ++ L +D+ +NNAG G PL F ++++ N+
Sbjct: 59 --IPADLSSEEGIEALVARVAERSDRLDVLVNNAGATWG-APLEAFPESGWDKVMDINVK 115
Query: 141 GSILCTREAMRVMRDQPKGGH------IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 194
T+ + ++R + I ++ G G YG++K + QL
Sbjct: 116 SVFFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLE---NYSYGASKAAVHQLTRK 172
Query: 195 LFKESKRSKVGVHTASPG 212
L KE + V+ +PG
Sbjct: 173 LAKELAGEHITVNAIAPG 190
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 8e-08
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 30/216 (13%)
Query: 15 WFSVVS--TRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSS 71
++V+ +RG+G+ +A + +G V + R+ + T E+E A GG
Sbjct: 4 KIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIE--------ARGG-- 53
Query: 72 KKNLVHAKVAGIACDVCEPADVQKL-SNFAVNEFGSIDIWINNA--GTNKGF----KPLL 124
K + CD + +V+ L A + G +DI +NNA KP
Sbjct: 54 -------KCIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFW 106
Query: 125 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 184
+ + I + L C+ A +M KG I + + +GG YG
Sbjct: 107 EEPPTIWDDINNVGLRAHYACSVYAAPLMVKAGKG-LIVII--SSTGGLEYLFNVAYGVG 163
Query: 185 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220
K + ++ A + E K V V + PG V T+L+L
Sbjct: 164 KAAIDRMAADMAHELKPHGVAVVSLWPGFVRTELVL 199
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 8e-08
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA--GTNKGFKPLLQFTNEEIEQIVS 136
KV+ + D+ + ++L N + G I +NNA TN F L T EE+++
Sbjct: 69 KVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNL---TAEELDKHYM 125
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
N+ + L + + R D+ GG I NM +G Y +TK + L +SL
Sbjct: 126 VNVRATTLLSSQFAR-GFDKKSGGRIINMT-SGQFQGPMVGELAYAATKGAIDALTSSLA 183
Query: 197 KESKRSKVGVHTASPG 212
E + V+ +PG
Sbjct: 184 AEVAHLGITVNAINPG 199
|
Length = 256 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 9e-08
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 23/148 (15%)
Query: 20 STRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
RG+G +AR +G D + E + T EL G
Sbjct: 10 GRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA---LG--------------V 52
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNEEIEQIV 135
+V DV + + + + + A +G ID +NNAG +G LL T E ++++
Sbjct: 53 EVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRG--DLLDLTPESFDRVL 110
Query: 136 STNLVGSILCTREAMRVMRDQPKGGHIF 163
+ NL G T+ + M QP+ +
Sbjct: 111 AINLRGPFFLTQAVAKRMLAQPEPEELP 138
|
Length = 256 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 1e-07
Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 30/145 (20%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
++G+GKA+ G V+ S + V
Sbjct: 15 SQGIGKAVVNRLKEEGSNVINFDIKEPS----------------------------YNDV 46
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
DV V K ++ ++++G IDI +NNAG + + +E ++I++ N+
Sbjct: 47 DYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIES-YGAIHAVEEDEWDRIINVNVN 105
Query: 141 GSILCTREAMRVMRDQPKGGHIFNM 165
G L ++ + M Q G I N+
Sbjct: 106 GIFLMSKYTIPYMLKQ-DKGVIINI 129
|
Length = 258 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 34/214 (15%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG+AL F+ G +V V RS+E V EL + + V G
Sbjct: 15 GLGRALVERFVAEGAKVAVLDRSAEKV----AELRADFGD----------------AVVG 54
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI----EQIVSTN 138
+ DV AD ++ V FG +D +I NAG L+ E++ +++ N
Sbjct: 55 VEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHIN 114
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAG---SGGSSTPLTAVYGSTKCGLRQLQASL 195
+ G IL + A+ + +G IF + AG GG +Y ++K + L L
Sbjct: 115 VKGYILGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGP-----LYTASKHAVVGLVKQL 168
Query: 196 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 229
E + V+ +PG ++TDL S Q +
Sbjct: 169 AYELA-PHIRVNGVAPGGMVTDLRGPASLGQGET 201
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 23/199 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG +AREF G + + +R ++ LEE LK ++A KVA
Sbjct: 13 GLGAGMAREFAAKGRDLALCARRTD-------RLEE-LKAELLARYPG-------IKVAV 57
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
A DV + V ++ +E G +D I NAG KG L + TN V +
Sbjct: 58 AALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKG-ARLGTGKFWANKATAETNFVAA 116
Query: 143 ILCTREAMRVMRDQPKGGH---IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ AM + R+Q GH I ++ + G A Y ++K G+ L L E
Sbjct: 117 LAQCEAAMEIFREQ-GSGHLVLISSV--SAVRGLPGVKAA-YAASKAGVASLGEGLRAEL 172
Query: 200 KRSKVGVHTASPGMVLTDL 218
++ + V T PG + +++
Sbjct: 173 AKTPIKVSTIEPGYIRSEM 191
|
Length = 248 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 27/163 (16%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+AL FL G RV V RS+E + ++ V
Sbjct: 17 GIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDH--------------------VLV 56
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ----IVSTN 138
+ DV AD Q+ + V+ FG +D ++ NAG L+ E ++ I + N
Sbjct: 57 VEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVN 116
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SGGSSTPLTA 179
+ G +L + A+ ++ G IF + + GG TA
Sbjct: 117 VKGYLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGPLYTA 158
|
Length = 263 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
++G+G A A F G + + +R ++++ E L + AA G V
Sbjct: 16 SKGIGAAAAEAFAAEGCHLHLVARDADAL--------EALAADLRAAHG--------VDV 59
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
A A D+ P ++L+ A G IDI +NNAG G L + +
Sbjct: 60 AVHALDLSSPEAREQLAAEA----GDIDILVNNAGAIPG-GGLDDVDDAAWRAGWELKVF 114
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST-KCGLRQLQASLFKES 199
G I TR A M+ + G I N+ G+ G + + GS L +L +S
Sbjct: 115 GYIDLTRLAYPRMKAR-GSGVIVNV--IGAAGENPDADYICGSAGNAALMAFTRALGGKS 171
Query: 200 KRSKVGVHTASPGMVLTDLLL 220
V V +PG V TD +L
Sbjct: 172 LDDGVRVVGVNPGPVATDRML 192
|
Length = 259 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 4e-07
Identities = 46/198 (23%), Positives = 73/198 (36%), Gaps = 27/198 (13%)
Query: 22 RGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RG+GKA L G +V A R S L K KV
Sbjct: 13 RGIGKAFVESLLAHGAKKVYAAVRDPGSA----AHLVA--------------KYG--DKV 52
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ DV +P ++ + A + +D+ INNAG K L + E ++Q + N+
Sbjct: 53 VPLRLDVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQEMDVNVF 108
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G + + V++ G I N++ S + P Y ++K L L E
Sbjct: 109 GLLRLAQAFAPVLKANGGGA-IVNLNSVAS-LKNFPAMGTYSASKSAAYSLTQGLRAELA 166
Query: 201 RSKVGVHTASPGMVLTDL 218
V + PG + T +
Sbjct: 167 AQGTLVLSVHPGPIDTRM 184
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 4e-07
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
++GLG+A+A + L G V+ SR+ +T+L E NL
Sbjct: 10 SQGLGEAIANQLLEKGTHVISISRTENK---ELTKLAEQ-----------YNSNLTF--- 52
Query: 81 AGIACDVCEPADVQK-----LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 135
+ D+ + +++ LS+ + SI + INNAG KP+ + +EE+ V
Sbjct: 53 --HSLDLQDVHELETNFNEILSSIQEDNVSSIHL-INNAGMVAPIKPIEKAESEELITNV 109
Query: 136 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQA 193
NL+ ++ T M+ +D + N+ SG + P + Y S+K GL
Sbjct: 110 HLNLLAPMILTSTFMKHTKDWKVDKRVINIS---SGAAKNPYFGWSAYCSSKAGLDMFTQ 166
Query: 194 SLFKESKRSKVGVHTAS--PGMVLTDL 218
++ E + + V + PG++ T++
Sbjct: 167 TVATEQEEEEYPVKIVAFSPGVMDTNM 193
|
Length = 251 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 4e-07
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 20/190 (10%)
Query: 24 LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83
LG +AR+ G + V +S + + E +K AAG AK
Sbjct: 20 LGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVK----AAG---------AKAVAF 66
Query: 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIEQIVSTNLVGS 142
D+ A V+KL + A FG DI IN G K KP+++ + E +++ + N +
Sbjct: 67 QADLTTAAAVEKLFDDAKAAFGRPDIAINTVG--KVLKKPIVEISEAEYDEMFAVNSKSA 124
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
+EA R + D G I + + G+ TP + Y +K + + KE
Sbjct: 125 FFFIKEAGRHLND---NGKIVTLVTS-LLGAFTPFYSAYAGSKAPVEHFTRAASKEFGAR 180
Query: 203 KVGVHTASPG 212
+ V PG
Sbjct: 181 GISVTAVGPG 190
|
Length = 257 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 4e-07
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 41/210 (19%)
Query: 24 LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83
+G AL + L +G V+ A E++ + L + K SKK +
Sbjct: 16 IGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK---------SKKLSLVE----- 61
Query: 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNA-GTNKGF-KPLLQFTNEEIEQIVSTNLVG 141
D+ + +++ + + ++G ID +N A NK + K + ++ + +S +L
Sbjct: 62 -LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGS 120
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS--------------TPLTAV--YGSTK 185
S L +++ + + Q GG++ N+ SS T +T+ Y + K
Sbjct: 121 SFLFSQQFAKYFKKQ-GGGNLVNI-------SSIYGVVAPKFEIYEGTSMTSPVEYAAIK 172
Query: 186 CGLRQLQASLFKESKRSKVGVHTASPGMVL 215
G+ L L K K S + V+ SPG +L
Sbjct: 173 AGIIHLTKYLAKYFKDSNIRVNCVSPGGIL 202
|
Length = 256 |
| >gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 7e-07
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 23/178 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG+A A G VVV +S + + L E + AAG K
Sbjct: 22 AGLGRAEALGLARLGATVVVNDVASA------LDASDVLDE-IRAAGA---------KAV 65
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+A D+ + A +L AV G +DI +NNAG + + L ++EE + +++ +L G
Sbjct: 66 AVAGDISQRATADELVATAV-GLGGLDIVVNNAGITRD-RMLFNMSDEEWDAVIAVHLRG 123
Query: 142 SILCTREAMRVMRDQPK--GGHIFN--MDGAGSGGSSTPL-TAVYGSTKCGLRQLQAS 194
L TR A R + K GG ++ ++ + G P+ A YG+ K G+ L S
Sbjct: 124 HFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLS 181
|
Length = 306 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 8e-07
Identities = 34/199 (17%), Positives = 72/199 (36%), Gaps = 20/199 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G+ A + G V++ R+ E +R + E +
Sbjct: 12 ASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINE----------------EGGRQ 55
Query: 80 VAGIACDV--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 137
D+ C + Q+L+ + +D ++NAG PL + + + +
Sbjct: 56 PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQV 115
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
N+ + + T+ + ++ G +F G G + Y +K L L
Sbjct: 116 NVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYAVSKFATEGLXQVLAD 173
Query: 198 ESKRSKVGVHTASPGMVLT 216
E ++ + V+ +PG T
Sbjct: 174 EYQQRNLRVNCINPGGTRT 192
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 9e-07
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 29/195 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+G A+AR + +G RV + A G++ + +
Sbjct: 14 GATLIGAAVARALVAAGARVAIVDID--------------------ADNGAAVAASLGER 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQIVST 137
IA D+ + A +++ V FG +DI +N A T + G + + +
Sbjct: 54 ARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS----SRADWLAALDV 109
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
NLV + + + A + GG I N + S + +Y ++K +RQL S+
Sbjct: 110 NLVSAAMLAQAAHPHLARG--GGAIVNF-TSISAKFAQTGRWLYPASKAAIRQLTRSMAM 166
Query: 198 ESKRSKVGVHTASPG 212
+ + V++ SPG
Sbjct: 167 DLAPDGIRVNSVSPG 181
|
Length = 261 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 9e-07
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 22/145 (15%)
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
I DV + A + V E G +DI +NNA + L T E++++ TN+
Sbjct: 101 IPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSY 160
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----YGSTKCGL----RQLQA 193
T+ A+ ++ +G I N GS T Y +TK + R L
Sbjct: 161 FHMTKAALPHLK---QGSAIINT------GSITGYEGNETLIDYSATKGAIHAFTRSLAQ 211
Query: 194 SLFKESKRSKVGVHTASPGMVLTDL 218
SL ++ R V+ +PG + T L
Sbjct: 212 SLVQKGIR----VNAVAPGPIWTPL 232
|
Length = 290 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-06
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S +G+G LA G +++ ++E + V +L + EG+ A HA
Sbjct: 17 SAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ---EGIKA----------HA- 62
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+V +V+ + G ID+ INNAG + P +F +E +++ N
Sbjct: 63 ---APFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRH-PFTEFPEQEWNDVIAVNQ 118
Query: 140 VGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
L ++ R M R K +I +M + TP Y ++K ++ L +
Sbjct: 119 TAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITP----YAASKGAVKMLTRGMCV 174
Query: 198 ESKRSKVGVHTASPGMVLTDL 218
E R + V+ +PG T++
Sbjct: 175 ELARHNIQVNGIAPGYFKTEM 195
|
Length = 254 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-06
Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 33/200 (16%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G A+A F+ +G +V+ ++ L + A
Sbjct: 18 QGIGYAVALAFVEAGAKVIGFDQA---------FLTQE-----------------DYPFA 51
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + A V ++ + E G +D+ +N AG + ++E+ +Q + N G
Sbjct: 52 TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGG 110
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES 199
+ R M R Q + G I + GS + P A YG++K L L + E
Sbjct: 111 AFNLFRAVMPQFRRQ-RSGAIVTV---GSNAAHVPRIGMAAYGASKAALTSLAKCVGLEL 166
Query: 200 KRSKVGVHTASPGMVLTDLL 219
V + SPG TD+
Sbjct: 167 APYGVRCNVVSPGSTDTDMQ 186
|
Length = 252 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-06
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 27/196 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+GK + +FL +GD+VV A E E A + K +V+A
Sbjct: 11 HGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADETLVKFVVYA-- 68
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ + G ID+ +NNA L EE ++I+S NL
Sbjct: 69 -------------------MLEKLGRIDVLVNNAARGSK-GILSSLLLEEWDRILSVNLT 108
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G +R + G I N+ + S P + Y ++K GL L +L S
Sbjct: 109 GPYELSRYCRDELIKN--KGRIINI-ASTRAFQSEPDSEAYAASKGGLVALTHAL-AMSL 164
Query: 201 RSKVGVHTASPGMVLT 216
+ V+ SPG + T
Sbjct: 165 GPDIRVNCISPGWINT 180
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-06
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 22/219 (10%)
Query: 20 STRGLGKALAREFLLSG-----DRVVVASRSSESVRMTVTEL--EENLKEGMMAAGGSSK 72
S +G G+ R+ L++G R + + E + + L EE ++
Sbjct: 46 SYKGFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQ------ 99
Query: 73 KNLVHA---KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 129
L+ A K + D+ + A ++L AV E G +DI +N AG K + T E
Sbjct: 100 --LIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTE 157
Query: 130 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 189
+ + TN+ + A+ + P G I N S S L Y STK +
Sbjct: 158 QFDATFKTNVYAMFWLCKAAIPHL---PPGASIINTGSIQSYQPSPTLLD-YASTKAAIV 213
Query: 190 QLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 228
+L K+ + V+ +PG V T L SG K
Sbjct: 214 AFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEK 252
|
Length = 300 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 40/169 (23%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A + +G RV SR+ A + V
Sbjct: 15 GIGRATAEKLARAGYRVFGTSRN--------------------PARAAPI-----PGVEL 49
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL----QFTNEEIEQIVSTN 138
+ DV + A VQ + + G ID+ +NNAG L + + + + + TN
Sbjct: 50 LELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG-----LAGAAEESSIAQAQALFDTN 104
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTK 185
+ G + TR + MR Q G I N+ S G P A+Y ++K
Sbjct: 105 VFGILRMTRAVLPHMRAQ-GSGRIINI---SSVLGFLPAPYMALYAASK 149
|
Length = 270 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 26/195 (13%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+GKA AR G V A+R + +M +L + G VH
Sbjct: 14 GIGKATARRLAAQGYTVYGAARRVD--KME--DLA--------SLG-------VHP---- 50
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
++ DV + A ++ + + E G ID+ +NNAG + + +E + NL G+
Sbjct: 51 LSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGA 109
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 202
T+ + MR Q + G I N+ G G TPL A Y +TK L +L E
Sbjct: 110 ARLTQLVLPHMRAQ-RSGRIINISSMG-GKIYTPLGAWYHATKFALEGFSDALRLEVAPF 167
Query: 203 KVGVHTASPGMVLTD 217
+ V PG + T+
Sbjct: 168 GIDVVVIEPGGIKTE 182
|
Length = 273 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 3e-06
Identities = 43/204 (21%), Positives = 74/204 (36%), Gaps = 43/204 (21%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+T G+G+ALAR G R++++ R +
Sbjct: 6 ATGGIGRALARALAGRGWRLLLSGRDA-------------------------------GA 34
Query: 80 VAGIACDVCEPADVQKLSN-----FAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 134
+AG+A +V A ++ E G +D+ + AG G KPL + +I
Sbjct: 35 LAGLAAEVGALARPADVAAELEVWALAQELGPLDLLVYAAGAILG-KPLARTKPAAWRRI 93
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 194
+ NL G+ L + A+ ++ G + + GA P + Y + K L
Sbjct: 94 LDANLTGAALVLKHALALL---AAGARLVFL-GAYPELVMLPGLSAYAAAKAALEAYVEV 149
Query: 195 LFKESKRSKVGVHTASPGMVLTDL 218
KE + + + P V T L
Sbjct: 150 ARKEVR--GLRLTLVRPPAVDTGL 171
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 3e-06
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 21/196 (10%)
Query: 23 GLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+ +A +G V R+ + + T +E AAG +
Sbjct: 19 GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIE--------AAGRRA---------I 61
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
IA DV AD++ E G++ + +N AG P + E+ + ++ NL G
Sbjct: 62 QIAADVTSKADLRAAVARTEAELGALTLAVNAAGI-ANANPAEEMEEEQWQTVMDINLTG 120
Query: 142 SIL-CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
L C EA R M + G + +G + L A Y ++K G+ L SL E
Sbjct: 121 VFLSCQAEA-RAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWV 179
Query: 201 RSKVGVHTASPGMVLT 216
+ V++ SPG T
Sbjct: 180 GRGIRVNSISPGYTAT 195
|
Length = 254 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 3e-06
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 46/225 (20%)
Query: 20 STRGLGKALAREFLLSGDRVVVA---SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 76
++RG+G+A+A L+ D +VA R+ ++ T+ E+E N GG K L+
Sbjct: 14 ASRGIGRAIAMR--LANDGALVAIHYGRNKQAADETIREIESN--------GG--KAFLI 61
Query: 77 HAKVAGIACDVCEPADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQFTNEE 130
A + I V+KL NE IDI +NNAG G + ++ T EE
Sbjct: 62 EADLNSID-------GVKKLVEQLKNELQIRVGTSEIDILVNNAGI--GTQGTIENTTEE 112
Query: 131 I-EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTK 185
I ++I++ N+ ++ + ++R + G + N+ A G GS YG +K
Sbjct: 113 IFDEIMAVNIKAPFFLIQQTLPLLRAE---GRVINISSAEVRLGFTGS-----IAYGLSK 164
Query: 186 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDL---LLSGSTIQN 227
L + L K + V+T PG TD+ LL I+N
Sbjct: 165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRN 209
|
Length = 254 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 3e-06
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
I D+ + D+ + + AV G IDI INNAG + + LL+F N++ + +++ N
Sbjct: 60 ITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR-QDLLEFGNKDWDDVININQKTV 118
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
++ + Q GG I N+ S GG P Y ++K + L +L E
Sbjct: 119 FFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVP---SYTASKSAVMGLTRALATELS 175
Query: 201 RSKVGVHTASPGMVLTD 217
+ + V+ +PG + TD
Sbjct: 176 QYNINVNAIAPGYMATD 192
|
Length = 251 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 25/199 (12%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T G+G AR+FL G RV + R S+ EL E+
Sbjct: 15 TSGIGLETARQFLAEGARVAITGRDPASLEAARAELGES--------------------A 54
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I D + A + L+ FG +D NAG K F PL + ++ +TN+
Sbjct: 55 LVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVK 113
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G + + ++ I ++G+ + P ++VY ++K L L +L E
Sbjct: 114 GPYFLIQALLPLLA---NPASIV-LNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELL 169
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ V+ SPG V T L
Sbjct: 170 PRGIRVNAVSPGPVQTPLY 188
|
Length = 249 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 5e-06
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G+ +AR G V + E + EL E +K + A S +
Sbjct: 14 ASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVK--IFPANLSDR------- 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
+V+ L A + +DI +NNAG T G ++ ++E+ + ++ N
Sbjct: 65 -----------DEVKALGQKAEADLEGVDILVNNAGITKDGL--FVRMSDEDWDSVLEVN 111
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L + TRE M + + G I N+ G + P A Y ++K G+ SL +E
Sbjct: 112 LTATFRLTRELTHPMMRR-RYGRIINITSV-VGVTGNPGQANYCASKAGMIGFSKSLAQE 169
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 238
V V+ +PG + + + + +KQ I+ +P
Sbjct: 170 IATRNVTVNCVAPGFIESAMT---GKLNDKQKEAIMGAIP 206
|
Length = 245 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 5e-06
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 103 EFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG 160
E G ID+ +NNAG + FK + T E+ ++ TNL T+ + MR++ G
Sbjct: 75 ELGPIDVLVNNAGITRDATFK---KMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWG 130
Query: 161 HIFNMDGA----GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216
I N+ G G + Y + K G+ +L +E V V+T SPG + T
Sbjct: 131 RIINISSVNGQKGQFGQTN-----YSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIAT 185
Query: 217 DLLLS 221
D++++
Sbjct: 186 DMVMA 190
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 6e-06
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RGLG A+AR F G RVVV SE L + L + +A
Sbjct: 13 GSRGLGAAIARAFAREGARVVVNYHQSED---AAEALADELGDRAIA------------- 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIE-----Q 133
+ DV + VQ + A FG I +NNA + F + ++I Q
Sbjct: 57 ---LQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQ 113
Query: 134 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165
+ ++ G++ + A+ MR+Q G I N+
Sbjct: 114 QLEGSVKGALNTIQAALPGMREQ-GFGRIINI 144
|
Length = 253 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK- 79
T G+GK A + G +V+ +R+ + ++ ++ SK + K
Sbjct: 62 TDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQ-------------SKYSKTQIKT 108
Query: 80 -VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-IEQIVST 137
V + D+ E V+++ E + + INN G + + +EE ++ ++
Sbjct: 109 VVVDFSGDIDE--GVKRIKETI--EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKV 164
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS----STPLTAVYGSTKCGLRQLQA 193
N+ G+ T+ + M + KG I N+ GSG + S PL AVY +TK + Q
Sbjct: 165 NVEGTTKVTQAVLPGMLKRKKGA-IINI---GSGAAIVIPSDPLYAVYAATKAYIDQFSR 220
Query: 194 SLFKESKRSKVGVHTASPGMVLTDL 218
L+ E K+S + V P V T +
Sbjct: 221 CLYVEYKKSGIDVQCQVPLYVATKM 245
|
Length = 320 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 8e-06
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 39/203 (19%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G A+ARE L +++ R +E + EL
Sbjct: 12 SRGIGAAIARE-LAPTHTLLLGGRPAERLDELAAELPG---------------------A 49
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTNL 139
D+ +P + AV + G +D+ ++NAG + G P+ + T +E + N+
Sbjct: 50 TPFPVDLTDPEAIAA----AVEQLGRLDVLVHNAGVADLG--PVAESTVDEWRATLEVNV 103
Query: 140 VGSILCTRE---AMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
V TR A+R GH+ ++ +G+G + P Y ++K LR L +L
Sbjct: 104 VAPAELTRLLLPALRAAH-----GHVVFIN-SGAGLRANPGWGSYAASKFALRALADAL- 156
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
+E + V V + PG TD+
Sbjct: 157 REEEPGNVRVTSVHPGRTDTDMQ 179
|
Length = 227 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 8e-06
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 17/93 (18%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A A + +G V + +R+ E++ V E+ A GG
Sbjct: 382 GIGRATAIKVAEAGATVFLVARNGEALDELVAEIR--------AKGG---------TAHA 424
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 115
CD+ + A V + E G +D +NNAG
Sbjct: 425 YTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAG 457
|
Length = 657 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 9e-06
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 34/157 (21%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMMAAGGSSK 72
++RG+GKA+A + G VV+A++++E ++ E+E AAGG
Sbjct: 11 ASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIE--------AAGG--- 59
Query: 73 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG----TNKGFKPLLQFTN 128
K D+ + V+ AV +FG IDI +NNA T P+ ++
Sbjct: 60 ------KALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRY-- 111
Query: 129 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165
+ ++ N G+ LC++ + ++ + K HI N+
Sbjct: 112 ---DLMMGVNTRGTYLCSKACLPYLK-KSKNPHILNL 144
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 46/222 (20%), Positives = 72/222 (32%), Gaps = 28/222 (12%)
Query: 18 VVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77
+ + A+A+ G VV+ + V EL + L
Sbjct: 2 IADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELP---------------- 45
Query: 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWIN---NAGTNKGFKPLLQFTNEEIEQI 134
A V I DV D+ +L + G ID ++ + + KP L + E +
Sbjct: 46 ADV--IPLDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKA 103
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 194
+ + I + A +M +GG I + + P G K L L
Sbjct: 104 LDISAYSFISLAKAAKPLM---NEGGSIVALSYIAAER-VFPGYGGMGVAKAALESLARY 159
Query: 195 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE 236
L E R + V+T S G T +GS I E
Sbjct: 160 LAYELGRKGIRVNTISAGPTKT---TAGSGIGGFDKMVEYAE 198
|
Length = 239 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 48/201 (23%), Positives = 77/201 (38%), Gaps = 34/201 (16%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G+A+A F G V+ + EE LKE + G + +V
Sbjct: 12 QGIGRAIALAFAREGANVIATDIN-----------EEKLKE--LERGPG-----ITTRVL 53
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP---LLQFTNEEIEQIVSTN 138
DV + V L E G ID+ N AG F +L +++ + ++ N
Sbjct: 54 ----DVTDKEQVAAL----AKEEGRIDVLFNCAG----FVHHGSILDCEDDDWDFAMNLN 101
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ L + + M + K G I NM S P VY +TK + L S+ +
Sbjct: 102 VRSMYLMIKAVLPKMLAR-KDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAAD 160
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
+ + + PG V T L
Sbjct: 161 FAQQGIRCNAICPGTVDTPSL 181
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 1e-05
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 103 EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 162
E G ID+ +NNAG + + T E+ ++ TNL T++ + M ++ G I
Sbjct: 78 EVGEIDVLVNNAGITRDVV-FRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRI 135
Query: 163 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222
N+ T Y + K G+ SL +E V V+T SPG + TD++
Sbjct: 136 INISSVNGQKGQFGQTN-YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV--- 191
Query: 223 STIQNKQMFNIICELP 238
I+ + I+ +P
Sbjct: 192 KAIRPDVLEKIVATIP 207
|
Length = 246 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Query: 86 DVCEPADVQKLSNFAVNEFGSIDIW--INNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSI 143
DV +P +++ + + G +W +NNAG ++ + + NL G++
Sbjct: 56 DVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTV 115
Query: 144 LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSK 203
T+ + ++R + KG + N+ + G P Y ++K + SL +E +
Sbjct: 116 EVTKAFLPLLR-RAKG-RVVNV-SSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWG 172
Query: 204 VGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241
V V PG T + + + KQ + LP V
Sbjct: 173 VKVSIIEPGNFKTGITGNSELWE-KQAKKLWERLPPEV 209
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 39/208 (18%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+GK +A + +G V++ R+ + + E+E + G+ V + A
Sbjct: 18 GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEA------LKGAGA-----VRYEPA- 65
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
DV + V + + A G + ++ AG ++ P+ Q ++ + V N+ G+
Sbjct: 66 ---DVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGT 122
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----------YGSTKCGLRQL 191
+ + A R + G GGS ++++ YG TK + L
Sbjct: 123 MYVLKHAARELV-------------RGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHL 169
Query: 192 QASLFKESKRSKVGVHTASPGMVLTDLL 219
E S V V++ PG++ TDL+
Sbjct: 170 MKLAADELGPSWVRVNSIRPGLIRTDLV 197
|
Length = 276 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 15/93 (16%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A L +G V + R E + L E A++
Sbjct: 19 GIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP---------------GARLLA 63
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 115
CDV + ADV + FG +D+ +NNAG
Sbjct: 64 ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96
|
Length = 265 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 3e-05
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+RG+G +ARE L G RVV++SR+ E++ + EL+E + +
Sbjct: 8 SSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE------------------YGE 49
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 115
V + D+ + D++ L A G ID + NAG
Sbjct: 50 VYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAG 85
|
Length = 259 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 23/193 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T G+ +A+ F +G V VASRS E V V +L++ +
Sbjct: 18 TSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ-----------------AGPEG 60
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIEQIVSTNL 139
G++ DV + A V+ +EFG ID+ ++ A N F P + + +V +L
Sbjct: 61 LGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGN--FPAPAAGMSANGFKTVVDIDL 118
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+G+ + A ++R G I + A P+ A + K G+ L +L E
Sbjct: 119 LGTFNVLKAAYPLLRRP--GASIIQIS-APQAFVPMPMQAHVCAAKAGVDMLTRTLALEW 175
Query: 200 KRSKVGVHTASPG 212
+ V++ PG
Sbjct: 176 GPEGIRVNSIVPG 188
|
Length = 264 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 52/197 (26%), Positives = 72/197 (36%), Gaps = 33/197 (16%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G ALAR F G RV +ASRS + + L A V
Sbjct: 8 GIGLALARAFAAEGARVTIASRSRDRLAAAARALGG------------------GAPVRT 49
Query: 83 IACDVCEPADVQKLSNFAVNEFGSID-IWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
A D+ + A V FA E G D + I A T G P+ + + + G
Sbjct: 50 AALDITDEAAVDAF--FA--EAGPFDHVVITAADTPGG--PVRALPLAAAQAAMDSKFWG 103
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ R A GG + + G + S + G+ L L L E
Sbjct: 104 AYRVARAA-----RIAPGGSLTFVSGFAAVRPS-ASGVLQGAINAALEALARGLALE--L 155
Query: 202 SKVGVHTASPGMVLTDL 218
+ V V+T SPG+V T L
Sbjct: 156 APVRVNTVSPGLVDTPL 172
|
Length = 230 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 51/198 (25%), Positives = 78/198 (39%), Gaps = 21/198 (10%)
Query: 22 RGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+G+A A F G RVVV + + + + ++AAGG + N
Sbjct: 16 GGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVAN------ 69
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTNL 139
D+ + L + AV FG +D+ +NNAG + + EE + +++ +L
Sbjct: 70 ---GDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRM--IANMSEEEWDAVIAVHL 124
Query: 140 VGSILCTREAMRVMRDQPKGGH-----IFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQA 193
G R A R + K G I N GAG GS Y + K G+ L
Sbjct: 125 KGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS--VGQGNYSAAKAGIAALTL 182
Query: 194 SLFKESKRSKVGVHTASP 211
E R V V+ +P
Sbjct: 183 VAAAELGRYGVTVNAIAP 200
|
Length = 286 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 22/200 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S++G+G ALA +G V++ R + L+ A + + V A
Sbjct: 18 SSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAA 77
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEIEQIVSTN 138
+ E G IDI +NNAG F+ PL F + E+++ TN
Sbjct: 78 IDAFEA-----------------EIGPIDILVNNAGMQ--FRTPLEDFPADAFERLLRTN 118
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ + R M + G I N+ S + P A Y +TK + L + +
Sbjct: 119 ISSVFYVGQAVARHMIAR-GAGKIINIASVQS-ALARPGIAPYTATKGAVGNLTKGMATD 176
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ + + +PG T L
Sbjct: 177 WAKHGLQCNAIAPGYFDTPL 196
|
Length = 255 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 8e-05
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILC 145
D+ + + L + A G +DI AG + T+E+ ++ + N+
Sbjct: 108 DLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWL 167
Query: 146 TREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG 205
T+EA+ ++ PKG I + S P Y +TK + L K+ +
Sbjct: 168 TQEAIPLL---PKGASIITTSSIQAYQPS-PHLLDYAATKAAILNYSRGLAKQVAEKGIR 223
Query: 206 VHTASPGMVLTDLLLSGSTIQNK 228
V+ +PG + T L +SG Q+K
Sbjct: 224 VNIVAPGPIWTALQISGGQTQDK 246
|
Length = 294 |
| >gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 8e-05
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 35/205 (17%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RGLG ALA + L G V+ +RS + AA G ++
Sbjct: 10 SRGLGAALAEQLLQPGIAVLGVARSRHP--------------SLAAAAG--------ERL 47
Query: 81 AGIACDVCEPADV-QKLSNFAVNEFG---SIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 136
A + D+ + A L+ + F S + INNAGT + PL I + V
Sbjct: 48 AEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVG 107
Query: 137 TNLVGSILCT-REAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQA 193
N+ ++ T A + I ++ SG + +VY +TK L
Sbjct: 108 LNVAAPLMLTAALAQAASDAAER--RILHIS---SGAARNAYAGWSVYCATKAALDHHAR 162
Query: 194 SLFKESKRSKVGVHTASPGMVLTDL 218
++ ++ R+ + + + +PG+V T +
Sbjct: 163 AVALDANRA-LRIVSLAPGVVDTGM 186
|
Length = 243 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 9e-05
Identities = 46/212 (21%), Positives = 76/212 (35%), Gaps = 56/212 (26%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHA-K 79
R +G A+AR +G RV + S + EL N +
Sbjct: 16 RRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL-----------------NALRPGS 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQIVST 137
A + D+ +P + +L V FG +D +NNA + F P L T + + + ++
Sbjct: 59 AAALQADLLDPDALPELVAACVAAFGRLDALVNNASS---FYPTPLGSITEAQWDDLFAS 115
Query: 138 NLVGSILCTREAMRVMR--------------DQPKGGHIFNMDGAGSGGSSTPLTAVYGS 183
NL ++ A +R ++P G+ VY +
Sbjct: 116 NLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYP-----------------VYCA 158
Query: 184 TKCGLRQLQASLFKESKRSKVGVHTASPGMVL 215
K L L SL E +V V+ +PG +L
Sbjct: 159 AKAALEMLTRSLALELA-PEVRVNAVAPGAIL 189
|
Length = 249 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 41/199 (20%), Positives = 73/199 (36%), Gaps = 17/199 (8%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G A+ R G + S M ++ E ++ +
Sbjct: 17 NGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDK---EPVLLKEEIESYG---VRCE 70
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNA--GTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D+ +P ++ G I INNA T+ + L T E++++ + N+
Sbjct: 71 HMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEEL---TAEQLDKHYAVNV 127
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLRQLQASLFK 197
++L + + D GG I N+ SG S P+ Y +TK + SL
Sbjct: 128 RATMLLSSAFAKQY-DGKAGGRIINLT---SGQSLGPMPDELAYAATKGAIEAFTKSLAP 183
Query: 198 ESKRSKVGVHTASPGMVLT 216
E + V+ +PG T
Sbjct: 184 ELAEKGITVNAVNPGPTDT 202
|
Length = 256 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 2e-04
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 43/254 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVV--ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77
++RG+G+A+A+ G V + +R E+ TV E++ N GGS+
Sbjct: 12 ASRGIGRAIAKRLANDGALVAIHYGNRKEEA-EETVYEIQSN--------GGSA------ 56
Query: 78 AKVAGIACDVCEPADVQKLSNFAVNEFGS------IDIWINNAGTNKGFKPLLQFTNEEI 131
I ++ V+ L + NE + DI INNAG G ++ T E+
Sbjct: 57 ---FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPG--AFIEETTEQF 111
Query: 132 -EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 190
+++VS N ++A+ +RD + I N+ A + S P Y TK +
Sbjct: 112 FDRMVSVNAKAPFFIIQQALSRLRDNSR---IINISSAATR-ISLPDFIAYSMTKGAINT 167
Query: 191 LQASLFKESKRSKVGVHTASPGMVLTDL---LLS-------GSTIQNKQMFNIICELPET 240
+ +L K+ + V+ PG + TD+ LLS +TI + ++ +T
Sbjct: 168 MTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADT 227
Query: 241 VARTLVPRIRVVKG 254
A P R V G
Sbjct: 228 AAFLASPDSRWVTG 241
|
Length = 252 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 2e-04
Identities = 58/201 (28%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A A E +G V + +R V + EE L + + A GG + VA
Sbjct: 21 GIGAATAIELAAAGFPVALGARR-------VEKCEE-LVDKIRADGGEA--------VA- 63
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
DV +P V+ A G I++ ++ AG + F L + + E+ E V +LVG+
Sbjct: 64 FPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAG-DTYFGKLHEISTEQFESQVQIHLVGA 122
Query: 143 ILCTREAMRV---MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL----RQLQASL 195
R A V M ++ +G IF G+ P YG+ K GL LQ L
Sbjct: 123 ---NRLATAVLPGMIERRRGDLIFV--GSDVALRQRPHMGAYGAAKAGLEAMVTNLQMEL 177
Query: 196 FKESKRSKVGVHTASPGMVLT 216
R+ + VH PG LT
Sbjct: 178 EGTGVRASI-VH---PGPTLT 194
|
Length = 274 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ALARE+ G + + +R +++++ L + A+V+
Sbjct: 13 GIGQALAREYARQGATLGLVARRTDALQAFAARLPK------------------AARVSV 54
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE---QIVSTNL 139
A DV + + + + G D+ I NAG + G L E++ +++ TN
Sbjct: 55 YAADVRDADALAAAAADFIAAHGLPDVVIANAGISVG---TLTEEREDLAVFREVMDTNY 111
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFK 197
G + + + MR +G + G S G P Y ++K + SL
Sbjct: 112 FGMVATFQPFIAPMRAARRG----TLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRV 167
Query: 198 ESKRSKVGVHTASPGMVLT 216
E + + V V T +PG + T
Sbjct: 168 ELRPAGVRVVTIAPGYIRT 186
|
Length = 257 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ + D+ + + L AV EFG IDI +NNAG + + ++F+ ++ + +++ N
Sbjct: 58 RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRR-EDAIEFSEKDWDDVMNLN 116
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLF 196
+ ++ A + Q GG I N+ S GG P Y ++K G+ + +
Sbjct: 117 IKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP---SYTASKSGVMGVTRLMA 173
Query: 197 KESKRSKVGVHTASPGMVLTD 217
E + + V+ +PG + T+
Sbjct: 174 NEWAKHNINVNAIAPGYMATN 194
|
Length = 253 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 23/201 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVT-ELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG+A+AR G +V + + + E+ EG+ A
Sbjct: 10 GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFA-------------- 55
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + A Q L A + G + + +NNAG F + Q +E ++++ N+
Sbjct: 56 -AVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGAIEQIELDEWRRVMAINVES 113
Query: 142 SILCTREAMRVMRD-QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
L + A+ +R QP I N+ + + P Y ++K + L S+ +
Sbjct: 114 IFLGCKHALPYLRASQP--ASIVNISSV-AAFKAEPDYTAYNASKAAVASLTKSIALDCA 170
Query: 201 RSKVGVHTAS--PGMVLTDLL 219
R + V S P + T ++
Sbjct: 171 RRGLDVRCNSIHPTFIRTGIV 191
|
Length = 251 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 16/95 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+RG+G A+ +G VVV R + + AAGG +
Sbjct: 14 SSRGIGADTAKILAGAGAHVVVNYRQKA-------PRANKVVAEIEAAGG---------R 57
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 114
+ + D+ + V L + A EFG +D + NA
Sbjct: 58 ASAVGADLTDEESVAALMDTAREEFGGLDALVLNA 92
|
Length = 248 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 35/201 (17%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G A+ R F+ G V GS A+
Sbjct: 15 SRGIGAAIVRRFVTDGANVR------------------------FTYAGSKDAAERLAQE 50
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
G + AD + + V + G++DI + NAG L + +I+++ N+
Sbjct: 51 TGATAVQTDSADRDAVIDV-VRKSGALDILVVNAGIAVFGDALELDAD-DIDRLFKINIH 108
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGS-GGSSTPLT--AVYGSTKCGLRQLQASLFK 197
+ EA R M P+GG I + GS G P+ A Y ++K L+ + L +
Sbjct: 109 APYHASVEAARQM---PEGGRIIII---GSVNGDRMPVAGMAAYAASKSALQGMARGLAR 162
Query: 198 ESKRSKVGVHTASPGMVLTDL 218
+ + ++ PG + TD
Sbjct: 163 DFGPRGITINVVQPGPIDTDA 183
|
Length = 237 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 24/119 (20%)
Query: 21 TRGLGKALAREFL-LSGDRVVVASRSS-----ESVRMTVTELEENLKEGMMAAGGSSKKN 74
G+G+ALAR G R+V+ RS E T+ LE +
Sbjct: 214 AGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY--------- 264
Query: 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 133
I+ DV + A V++L +G+ID I+ AG + L Q T E+ E
Sbjct: 265 --------ISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRD-ALLAQKTAEDFEA 314
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 6e-04
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 2/107 (1%)
Query: 105 GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164
G+ID+ ++N + P+ + +I Q + + A+ M+ G IF
Sbjct: 71 GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQMKKAGGGSIIFI 130
Query: 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASP 211
++YG + L SL KE R + V+ P
Sbjct: 131 TSAVPKKP--LAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGP 175
|
Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 23/133 (17%)
Query: 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 73
R F S+ GLG A AR L G VV+ +RS + A K
Sbjct: 9 RIFITGSSDGLGLAAARTLLHQGHEVVLHARSQKR---------------AADA----KA 49
Query: 74 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 133
A I D+ A+ +KL++ VN G D I+NAG G P + + I
Sbjct: 50 ACPGAAGVLIG-DLSSLAETRKLAD-QVNAIGRFDAVIHNAGILSG--PNRKTPDTGIPA 105
Query: 134 IVSTNLVGSILCT 146
+V+ N++ + T
Sbjct: 106 MVAVNVLAPYVLT 118
|
Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260 |
| >gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.003
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 20/94 (21%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G A+A G VV + V E L GG++
Sbjct: 220 RGIGAAIAEVLARDGAHVVC---------LDVPAAGEALAAVANRVGGTA---------- 260
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 115
+A D+ P +++ G +DI ++NAG
Sbjct: 261 -LALDITAPDAPARIAEHLAERHGGLDIVVHNAG 293
|
Length = 450 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 347 | |||
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 100.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.98 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.98 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.98 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.98 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.98 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.98 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.97 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.97 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.97 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.97 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.97 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.96 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.96 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.96 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.96 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.95 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.94 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.94 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.93 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.92 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.91 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.89 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.88 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.87 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.87 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.85 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.83 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.83 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.83 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.79 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.78 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.77 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.76 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.76 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.76 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.75 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.74 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.73 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.73 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.72 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.7 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.69 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.67 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.65 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.62 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.62 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.62 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.62 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.62 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.61 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.59 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.56 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.56 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.53 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.51 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.5 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.49 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.48 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.47 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.46 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.45 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.45 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.45 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.43 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.42 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.41 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.4 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.39 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.39 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.37 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.37 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.34 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.34 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.31 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 99.27 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.27 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.24 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.24 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.24 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.21 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.19 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.15 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.14 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.12 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.11 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.09 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.06 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.01 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.0 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 98.88 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.88 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.83 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.82 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.82 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.79 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.76 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.74 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.71 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 98.67 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.67 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.59 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.56 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.55 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.49 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.45 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.41 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.39 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.39 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.32 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 98.3 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.23 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.19 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.16 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.05 | |
| PLN00106 | 323 | malate dehydrogenase | 98.03 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.95 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.94 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.89 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.82 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.81 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 97.76 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.74 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.67 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.67 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.58 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.57 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.57 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.52 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.51 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.51 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.44 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.43 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.38 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.37 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.36 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.31 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.25 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.25 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.21 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.18 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.14 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.14 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.12 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.1 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.09 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.09 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 97.08 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.04 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.03 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.03 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 97.02 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.01 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.99 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.98 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.95 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.94 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.94 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.94 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.9 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 96.88 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.88 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.85 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.83 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.79 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.78 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.77 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.77 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.75 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.75 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.63 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.61 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.59 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.57 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.56 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.53 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.53 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.51 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.51 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.51 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.49 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.48 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.48 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.47 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.44 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.43 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.35 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.34 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.34 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.31 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.3 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.29 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.28 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.28 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.26 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.25 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.23 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.23 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.18 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.17 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.15 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.13 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.13 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.11 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.11 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.09 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.03 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 96.03 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 95.99 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 95.98 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 95.96 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 95.95 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 95.95 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.94 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.94 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 95.94 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.93 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 95.91 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.91 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.87 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.86 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 95.84 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 95.84 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 95.83 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.76 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.75 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.69 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.69 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 95.68 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.65 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 95.65 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 95.64 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.61 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 95.59 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 95.53 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.53 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.52 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.48 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 95.46 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.39 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.39 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.39 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 95.38 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 95.38 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.34 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.34 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 95.32 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 95.32 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.31 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 95.28 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.28 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 95.27 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 95.26 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 95.19 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.18 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.16 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 95.11 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.08 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 95.04 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 95.03 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 95.03 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 94.99 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 94.99 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 94.99 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 94.98 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 94.98 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 94.96 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 94.93 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 94.9 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.89 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 94.89 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 94.87 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 94.85 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 94.8 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.72 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 94.69 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 94.61 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 94.6 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 94.55 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 94.54 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 94.52 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.5 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 94.46 | |
| PLN02494 | 477 | adenosylhomocysteinase | 94.44 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 94.44 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 94.39 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 94.37 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 94.35 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 94.29 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 94.28 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 94.28 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.26 | |
| KOG3191 | 209 | consensus Predicted N6-DNA-methyltransferase [Tran | 94.25 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 94.22 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 94.22 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 94.16 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 94.13 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 94.12 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 94.05 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 94.02 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.02 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 94.0 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 93.98 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 93.91 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 93.89 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 93.84 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.8 |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=319.93 Aligned_cols=224 Identities=27% Similarity=0.362 Sum_probs=200.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++|||||||||.++|+.|++.|++|++++|+.++++++.+++.+ .++.++.+|++|.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-------------------~~~~~~~~DVtD~ 65 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-------------------GAALALALDVTDR 65 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-------------------CceEEEeeccCCH
Confidence 359999999999999999999999999999999999999999888742 4688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.++|++||+||||||.... .++.+.+.|+|++++++|+.|.++.+++++|.|.++ +.|+|||+||. +
T Consensus 66 ~~~~~~i~~~~~~~g~iDiLvNNAGl~~g-~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~Si-A 142 (246)
T COG4221 66 AAVEAAIEALPEEFGRIDILVNNAGLALG-DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSI-A 142 (246)
T ss_pred HHHHHHHHHHHHhhCcccEEEecCCCCcC-ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccc-c
Confidence 99999999999999999999999999884 999999999999999999999999999999999998 58899999999 7
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh-----hhhhccCCHHHHHHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-----MFNIICELPETVARTL 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~pe~~a~~~ 245 (347)
+..++|+...|+++|+++.+|++.|+.|+..++|||.+|+||.+.|..+.......... .......+|+++|+.+
T Consensus 143 G~~~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V 222 (246)
T COG4221 143 GRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAV 222 (246)
T ss_pred ccccCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887665544332111 1233456899999999
Q ss_pred hhhhhhccccc
Q 019009 246 VPRIRVVKGSG 256 (347)
Q Consensus 246 ~~~~~~~~~~~ 256 (347)
...+..|+.+-
T Consensus 223 ~~~~~~P~~vn 233 (246)
T COG4221 223 LFAATQPQHVN 233 (246)
T ss_pred HHHHhCCCccc
Confidence 99888887643
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=326.55 Aligned_cols=225 Identities=24% Similarity=0.355 Sum_probs=202.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++||||||+|||+++|++|+++|++|++++|++++++++.++|+.. .+.++.++++|+++
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~----------------~~v~v~vi~~DLs~ 67 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK----------------TGVEVEVIPADLSD 67 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh----------------hCceEEEEECcCCC
Confidence 34699999999999999999999999999999999999999999999885 45689999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++.++.+++.++.+.||+||||||+.. .+++.+.+.++.++++++|+.+.+.++++++|.|.++ +.|.||||+|.
T Consensus 68 ~~~~~~l~~~l~~~~~~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~- 144 (265)
T COG0300 68 PEALERLEDELKERGGPIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSA- 144 (265)
T ss_pred hhHHHHHHHHHHhcCCcccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEech-
Confidence 99999999999999889999999999988 6899999999999999999999999999999999998 68999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.|..+.|++||+++.+|+++|+.|+++.||+|.+|+||++.|++..................+|+++|+..+..+
T Consensus 145 ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l 224 (265)
T COG0300 145 AGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKAL 224 (265)
T ss_pred hhcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999998622222222223445568999999999888
Q ss_pred hhcc
Q 019009 250 RVVK 253 (347)
Q Consensus 250 ~~~~ 253 (347)
...+
T Consensus 225 ~~~k 228 (265)
T COG0300 225 EKGK 228 (265)
T ss_pred hcCC
Confidence 7543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=324.04 Aligned_cols=198 Identities=24% Similarity=0.377 Sum_probs=181.9
Q ss_pred CCcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 6 DEHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 6 ~~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
+++|. ||+|+|||||+|||+++|++|+++|++++++.|..++++...+++++..+. .++.+++|
T Consensus 7 ~e~~~-~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~---------------~~v~~~~~ 70 (282)
T KOG1205|consen 7 MERLA-GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSL---------------EKVLVLQL 70 (282)
T ss_pred HHHhC-CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCc---------------CccEEEeC
Confidence 45555 499999999999999999999999999999999999999998999886431 26999999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|++|.++++++++++.++||++|+||||||+.. .....+.+.+++..+|++|++|++.++|+++|+|++++ .|+||++
T Consensus 71 Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvi 148 (282)
T KOG1205|consen 71 DVSDEESVKKFVEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVI 148 (282)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEE
Confidence 999999999999999999999999999999988 68888999999999999999999999999999999984 7999999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCC--eEEEEeeCCcccCcccccCc
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLLSGS 223 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~g--I~v~~i~PG~v~T~~~~~~~ 223 (347)
+|+ +|..+.|....|++||+|+++|+++|++|+.+.+ |++ +|+||+|+|++.....
T Consensus 149 sSi-aG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~ 206 (282)
T KOG1205|consen 149 SSI-AGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL 206 (282)
T ss_pred ecc-ccccCCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence 998 8999999999999999999999999999999877 566 9999999999766543
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-42 Score=304.37 Aligned_cols=220 Identities=22% Similarity=0.310 Sum_probs=198.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.-.|++||||||++|||+++|.+||++|+++++.+.|.+..++.++++++ . ++++.+.||++
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~-----------------~-g~~~~y~cdis 96 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRK-----------------I-GEAKAYTCDIS 96 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHh-----------------c-CceeEEEecCC
Confidence 34579999999999999999999999999999999999999999999876 3 37999999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.+++.+.++++++++|.||+||||||+.. ..++.+.+.|++++++++|+.|+|+.+|+|+|.|.++ +.|+||+|+|+
T Consensus 97 ~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~ 174 (300)
T KOG1201|consen 97 DREEIYRLAKKVKKEVGDVDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASV 174 (300)
T ss_pred CHHHHHHHHHHHHHhcCCceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhh
Confidence 999999999999999999999999999988 5888999999999999999999999999999999998 68999999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc---CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~---~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
+|..+.++...||+||+|+.+|.++|..|+. ..||+..+|+|++++|+|... ......+ .+...|+++|+.+
T Consensus 175 -aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~--~~~~~~l--~P~L~p~~va~~I 249 (300)
T KOG1201|consen 175 -AGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG--ATPFPTL--APLLEPEYVAKRI 249 (300)
T ss_pred -hcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC--CCCCccc--cCCCCHHHHHHHH
Confidence 8999999999999999999999999999986 467999999999999999875 1122222 2334799999999
Q ss_pred hhhhhhcc
Q 019009 246 VPRIRVVK 253 (347)
Q Consensus 246 ~~~~~~~~ 253 (347)
++.+...+
T Consensus 250 v~ai~~n~ 257 (300)
T KOG1201|consen 250 VEAILTNQ 257 (300)
T ss_pred HHHHHcCC
Confidence 99988543
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=292.93 Aligned_cols=240 Identities=21% Similarity=0.278 Sum_probs=205.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.|+++||||++|||+|+++.|++.|++|++.+++....++++..|.. . .+-..+.||+++.+
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g-----------------~-~~h~aF~~DVS~a~ 75 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG-----------------Y-GDHSAFSCDVSKAH 75 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC-----------------C-CccceeeeccCcHH
Confidence 48999999999999999999999999999999999888877777633 1 34567899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~Iv~vsS~~~ 170 (347)
+++..+++..+.+|.+++||||||+.. ...+.....|+|+..+.+|+.|.|.++|++.+.|...+ .+.+||||||+ .
T Consensus 76 ~v~~~l~e~~k~~g~psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSI-V 153 (256)
T KOG1200|consen 76 DVQNTLEEMEKSLGTPSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSI-V 153 (256)
T ss_pred HHHHHHHHHHHhcCCCcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhh-h
Confidence 999999999999999999999999988 57788899999999999999999999999999955433 45599999998 7
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+..++..|+++|+++.+|+|+.|+|++.++||||.|+||+|.|||....++.....+. .-.++.++.
T Consensus 154 GkiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~----------~~iPmgr~G 223 (256)
T KOG1200|consen 154 GKIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKIL----------GMIPMGRLG 223 (256)
T ss_pred cccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHH----------ccCCccccC
Confidence 8899999999999999999999999999999999999999999999997655432221111 112356777
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+|++++.+.||+++...+++++.+-.+|++
T Consensus 224 ~~EevA~~V~fLAS~~ssYiTG~t~evtGGl 254 (256)
T KOG1200|consen 224 EAEEVANLVLFLASDASSYITGTTLEVTGGL 254 (256)
T ss_pred CHHHHHHHHHHHhccccccccceeEEEeccc
Confidence 7888999999999999988877777666654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=310.80 Aligned_cols=247 Identities=18% Similarity=0.204 Sum_probs=202.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. .+.++.++.+|++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dv~~~ 70 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE----------------SNVDVSYIVADLTKR 70 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCceEEEEecCCCH
Confidence 4699999999999999999999999999999999999888887777552 234688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++. ++|++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 71 ~~i~~~~~~~~-~~g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~-~ 146 (263)
T PRK08339 71 EDLERTVKELK-NIGEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSV-A 146 (263)
T ss_pred HHHHHHHHHHH-hhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCc-c
Confidence 99999999985 6899999999999866 4778899999999999999999999999999999876 47899999998 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-----HHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----ARTL 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~~~ 245 (347)
+..+.++...|+++|+|+++|+++|+.|++++|||||+|+||+|+|++......... ......+++. ...+
T Consensus 147 ~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p 222 (263)
T PRK08339 147 IKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRA----KREGKSVEEALQEYAKPIP 222 (263)
T ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhh----hccCCCHHHHHHHHhccCC
Confidence 777888899999999999999999999999999999999999999998532110000 0000011111 1223
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++++..|++++..+.||+++...++++..+..+|++
T Consensus 223 ~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~ 258 (263)
T PRK08339 223 LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGR 258 (263)
T ss_pred cccCcCHHHHHHHHHHHhcchhcCccCceEEECCCc
Confidence 566777888999999999988766666666655554
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=306.34 Aligned_cols=238 Identities=14% Similarity=0.116 Sum_probs=192.5
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++. ..++.++++|++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~-------------------~~~~~~~~~Dl~ 65 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV-------------------DEEDLLVECDVA 65 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc-------------------cCceeEEeCCCC
Confidence 46999999999 8999999999999999999999983 4444333331 235778999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|+++++++++++.+++|++|+||||||+..+ ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 66 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~i 142 (252)
T PRK06079 66 SDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTL 142 (252)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEE
Confidence 9999999999999999999999999998642 257788999999999999999999999999999963 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.|++..|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... +... .+...+.+
T Consensus 143 ss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~--~~~~------~~~~~~~p 213 (252)
T PRK06079 143 TYF-GSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH--KDLL------KESDSRTV 213 (252)
T ss_pred ecc-CccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh--HHHH------HHHHhcCc
Confidence 987 57777888999999999999999999999999999999999999999975332110 0000 01112234
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.+++..|++++..+.||+++...++++..+..+|+
T Consensus 214 ~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 214 DGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred ccCCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 56667788888888899988776666665555544
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=306.94 Aligned_cols=243 Identities=13% Similarity=0.139 Sum_probs=196.7
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||+ +|||+++|++|+++|++|++++|+.+ +++.++++.+. .+.. ..+++|++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~----------------~~~~-~~~~~Dv~ 65 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQE----------------LGSD-YVYELDVS 65 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHh----------------cCCc-eEEEecCC
Confidence 36999999997 89999999999999999999999853 33334444332 1223 56899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|++|+||||||+..+ ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 66 d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~i 142 (274)
T PRK08415 66 KPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTL 142 (274)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEE
Confidence 9999999999999999999999999998542 256788999999999999999999999999999964 4799999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.|.+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++...... . .... .....+.+
T Consensus 143 sS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~-~~~~------~~~~~~~p 213 (274)
T PRK08415 143 SYL-GGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD-F-RMIL------KWNEINAP 213 (274)
T ss_pred ecC-CCccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch-h-hHHh------hhhhhhCc
Confidence 987 5777788889999999999999999999999999999999999999987432111 0 0000 00012234
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD 283 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (347)
+++...|++++..+.||+++...++++..+..+|++..
T Consensus 214 l~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~ 251 (274)
T PRK08415 214 LKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNI 251 (274)
T ss_pred hhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccc
Confidence 56677788888888999998887888888888877653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=303.35 Aligned_cols=242 Identities=20% Similarity=0.244 Sum_probs=197.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.. ++..+++++ .+.++.++.+|++|.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 67 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA-----------------LGRKFHFITADLIQQ 67 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH-----------------cCCeEEEEEeCCCCH
Confidence 4699999999999999999999999999999998643 233344433 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.+|+||++||. +
T Consensus 68 ~~~~~~~~~~~~~~g~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~-~ 145 (251)
T PRK12481 68 KDIDSIVSQAVEVMGHIDILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASM-L 145 (251)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCCh-h
Confidence 9999999999999999999999999876 4778889999999999999999999999999999876446899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++....... .. . ..+...+.+.++..
T Consensus 146 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~-~~-~------~~~~~~~~p~~~~~ 217 (251)
T PRK12481 146 SFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD-TA-R------NEAILERIPASRWG 217 (251)
T ss_pred hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC-hH-H------HHHHHhcCCCCCCc
Confidence 6677788889999999999999999999999999999999999999986432110 00 0 00111223345666
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++.++.||+++...++++..+..+|++
T Consensus 218 ~peeva~~~~~L~s~~~~~~~G~~i~vdgg~ 248 (251)
T PRK12481 218 TPDDLAGPAIFLSSSASDYVTGYTLAVDGGW 248 (251)
T ss_pred CHHHHHHHHHHHhCccccCcCCceEEECCCE
Confidence 7788888888999887767666666666654
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=305.31 Aligned_cols=240 Identities=15% Similarity=0.147 Sum_probs=191.6
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||++ |||+++|++|+++|++|++++|+.+..+ ..+++.+. .+ ....+++|++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~----------------~g-~~~~~~~Dv~ 67 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RVKPLAES----------------LG-SDFVLPCDVE 67 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HHHHHHHh----------------cC-CceEEeCCCC
Confidence 469999999997 9999999999999999999999864333 23344321 11 2346899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|++|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 68 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~i 144 (271)
T PRK06505 68 DIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTL 144 (271)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEE
Confidence 9999999999999999999999999998642 146778999999999999999999999999999973 4899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-HHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ART 244 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~ 244 (347)
||. ++..+.|++..|++||+|+.+|+++|+.|++++|||||+|+||+|+|++...... .... .+.. ...
T Consensus 145 sS~-~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~--~~~~-------~~~~~~~~ 214 (271)
T PRK06505 145 TYG-GSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD--ARAI-------FSYQQRNS 214 (271)
T ss_pred cCC-CccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc--hHHH-------HHHHhhcC
Confidence 987 5677888899999999999999999999999999999999999999997532211 0000 0001 112
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++++..|++++..+.||+++...++++..+..+|++
T Consensus 215 p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 215 PLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred CccccCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence 3455667777888888999887767777776666655
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=302.19 Aligned_cols=252 Identities=29% Similarity=0.411 Sum_probs=204.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++|||+++|||+++|++|++.|++|++++|+++++++..+++..... .+.++..+.||+++.
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dv~~~ 72 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGY--------------TGGKVLAIVCDVSKE 72 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--------------CCCeeEEEECcCCCH
Confidence 479999999999999999999999999999999999999998888776321 245799999999999
Q ss_pred HHHHHHHHHHHhh-cCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhH-HHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNE-FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG-SILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~-~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g-~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
++++++++...++ +|+||+||||||......++.+.++|+|++++++|+.| .+.+.+.+.|+++++ ++|.|+++||.
T Consensus 73 ~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-~gg~I~~~ss~ 151 (270)
T KOG0725|consen 73 VDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-KGGSIVNISSV 151 (270)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-CCceEEEEecc
Confidence 9999999999998 79999999999998755579999999999999999995 666666676777665 68899999987
Q ss_pred CCCCCCCCCc-chhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-chhhhhhhccCCHHHHHHHHh
Q 019009 169 GSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 169 ~~~~~~~~~~-~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-~~~~~~~~~~~~pe~~a~~~~ 246 (347)
++..+.+.. ..|+++|+|+++|+|+||.||+++|||||+|+||.+.|++....... ..+.+... .+.-...++
T Consensus 152 -~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~----~~~~~~~p~ 226 (270)
T KOG0725|consen 152 -AGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEA----TDSKGAVPL 226 (270)
T ss_pred -ccccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhh----hcccccccc
Confidence 455554444 79999999999999999999999999999999999999981111110 01111110 000112347
Q ss_pred hhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 247 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.++..|++++..+.||+++...++++..+..+|.+.
T Consensus 227 gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~ 262 (270)
T KOG0725|consen 227 GRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFT 262 (270)
T ss_pred CCccCHHHHHHhHHhhcCcccccccCCEEEEeCCEE
Confidence 788888899999999999987688888888887664
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=301.86 Aligned_cols=241 Identities=16% Similarity=0.124 Sum_probs=193.7
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||+++||||++ |||+++|+.|+++|++|++++|+. +.++.++++.+. .+. ..++++|++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~----------------~g~-~~~~~~Dv~ 68 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEE----------------IGC-NFVSELDVT 68 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHh----------------cCC-ceEEEccCC
Confidence 469999999998 999999999999999999999884 444455555432 122 246789999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|+++++++++.+.+++|++|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 69 ~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~i 145 (260)
T PRK06603 69 NPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTL 145 (260)
T ss_pred CHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEE
Confidence 9999999999999999999999999997541 246778999999999999999999999999999963 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.|++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++...... ... .. .+...+.+
T Consensus 146 sS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~-~~------~~~~~~~p 216 (260)
T PRK06603 146 TYY-GAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-FST-ML------KSHAATAP 216 (260)
T ss_pred ecC-ccccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-cHH-HH------HHHHhcCC
Confidence 987 5667788899999999999999999999999999999999999999997532111 000 00 01111234
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++++..|++++..+.||+++...++++..+..+|++
T Consensus 217 ~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~ 252 (260)
T PRK06603 217 LKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGY 252 (260)
T ss_pred cCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcc
Confidence 566677888888888999987767777777666665
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=299.54 Aligned_cols=241 Identities=24% Similarity=0.369 Sum_probs=199.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+.+++++..++++. .+.++..+.+|++|+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 70 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT-----------------SGGKVVPVCCDVSQH 70 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEEccCCCH
Confidence 469999999999999999999999999999999999988888777755 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.+++||++||. +
T Consensus 71 ~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~ 148 (253)
T PRK05867 71 QQVTSMLDQVTAELGGIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASM-S 148 (253)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcH-H
Confidence 9999999999999999999999999876 4778889999999999999999999999999999876456899999987 3
Q ss_pred CCC-CCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 171 GGS-STP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 171 ~~~-~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+.. ..+ ....|++||+|+++|+++|++|++++||+||+|+||+|+|++....... . .+...+.++++
T Consensus 149 ~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~-~----------~~~~~~~~~~r 217 (253)
T PRK05867 149 GHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY-Q----------PLWEPKIPLGR 217 (253)
T ss_pred hcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH-H----------HHHHhcCCCCC
Confidence 432 223 4578999999999999999999999999999999999999986432110 0 01111223456
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+..|++++..+.||+++...++++..+..+|++
T Consensus 218 ~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 218 LGRPEELAGLYLYLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred CcCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence 667777788888999887766677666666654
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=307.43 Aligned_cols=269 Identities=17% Similarity=0.200 Sum_probs=202.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----------hHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS----------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~----------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (347)
.+|+++||||++|||+++|+.|++.|++|++++|+. ++++++.++++. .+.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~~~ 69 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA-----------------AGGRG 69 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh-----------------cCCce
Confidence 469999999999999999999999999999999984 345555555543 34567
Q ss_pred eEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcC-CCCC---CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC
Q 019009 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA-GTNK---GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ 156 (347)
Q Consensus 81 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA-G~~~---~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~ 156 (347)
.++.+|++|+++++++++++.+++|+||+||||| |... ...++.+.+.++|++++++|+.+++.++++++|+|+++
T Consensus 70 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~ 149 (305)
T PRK08303 70 IAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR 149 (305)
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Confidence 7899999999999999999999999999999999 8531 12567788899999999999999999999999999876
Q ss_pred CCCcEEEEEcCCCCCC--CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhc
Q 019009 157 PKGGHIFNMDGAGSGG--SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 234 (347)
Q Consensus 157 ~~~g~Iv~vsS~~~~~--~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~ 234 (347)
++|+||++||..+.. .+.++...|++||+|+.+|+++|+.|+++.||+||+|+||+|+|+|............
T Consensus 150 -~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~---- 224 (305)
T PRK08303 150 -PGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENW---- 224 (305)
T ss_pred -CCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccch----
Confidence 468999999863322 1334567899999999999999999999999999999999999998532110000000
Q ss_pred cCCHHHHHHHH-hhhhhhccccccceeeccchHH-HHHHhhhhhcCCcccccCCccccccchhhhhhhccccc
Q 019009 235 CELPETVARTL-VPRIRVVKGSGKAINYLTPPRI-LLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRA 305 (347)
Q Consensus 235 ~~~pe~~a~~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (347)
.+...+.+ ..+...|++++..+.||+++.. .++++ .++.+..+....+...+.....++|+.+++..
T Consensus 225 ---~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (305)
T PRK08303 225 ---RDALAKEPHFAISETPRYVGRAVAALAADPDVARWNG-QSLSSGQLARVYGFTDLDGSRPDAWRYLVEVQ 293 (305)
T ss_pred ---hhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCC-cEEEhHHHHHhcCccCCCCCCCcchhhhhhcc
Confidence 01111122 2344567777777788888764 34433 34444555555555666777778887666543
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=300.13 Aligned_cols=242 Identities=15% Similarity=0.141 Sum_probs=195.1
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+|+++||||+ +|||+++|++|+++|++|++++|+.+ +.++..+++.+ ...++.++++|
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D 67 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE-----------------PLNPSLFLPCD 67 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh-----------------ccCcceEeecC
Confidence 46999999986 89999999999999999999887654 34455555543 22346788999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
++|.++++++++.+.+++|++|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||
T Consensus 68 l~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv 144 (258)
T PRK07370 68 VQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIV 144 (258)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEE
Confidence 999999999999999999999999999998531 257888999999999999999999999999999974 48999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
++||. ++..+.|++..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++...... ..... .+....
T Consensus 145 ~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-~~~~~-------~~~~~~ 215 (258)
T PRK07370 145 TLTYL-GGVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-ILDMI-------HHVEEK 215 (258)
T ss_pred EEecc-ccccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-chhhh-------hhhhhc
Confidence 99997 6777888999999999999999999999999999999999999999997532110 00000 000112
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.++.++..|++++..+.||+++...++++..+..+|++
T Consensus 216 ~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~ 253 (258)
T PRK07370 216 APLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGY 253 (258)
T ss_pred CCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence 34556777888888899999988877776666665554
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=300.64 Aligned_cols=242 Identities=12% Similarity=0.081 Sum_probs=191.4
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGa--s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|+++|||| ++|||+++|+.|+++|++|++++|+ ++.++..+++.+. ......++||++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~Dv~ 66 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVV-DKLEERVRKMAAE-----------------LDSELVFRCDVA 66 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc-HHHHHHHHHHHhc-----------------cCCceEEECCCC
Confidence 4699999997 6799999999999999999999886 3444455555431 123457899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCC---CC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KP-LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~-~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
|.++++++++++.+++|+||+||||||+.... .+ +.+.+.++|+.++++|+.++++++++++|+|+++ +|+||+
T Consensus 67 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~ 144 (261)
T PRK08690 67 SDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVA 144 (261)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEE
Confidence 99999999999999999999999999986421 12 3567889999999999999999999999999754 589999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
+||. ++..+.|++..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++....... .... .+...+.
T Consensus 145 iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~--~~~~------~~~~~~~ 215 (261)
T PRK08690 145 LSYL-GAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF--GKLL------GHVAAHN 215 (261)
T ss_pred Eccc-ccccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch--HHHH------HHHhhcC
Confidence 9987 56678889999999999999999999999999999999999999999975432110 0000 0001123
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++++..|++++..+.||+++...+.++..+..+|++
T Consensus 216 p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 216 PLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred CCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 4566777888888888999887766666666666554
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=298.53 Aligned_cols=242 Identities=14% Similarity=0.135 Sum_probs=190.4
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..+|+++||||++ |||+++|+.|+++|++|++++|+ +++++..+++... ...+..+.||+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~-----------------~~~~~~~~~Dl 65 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQ-----------------LGSDIVLPCDV 65 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhc-----------------cCCceEeecCC
Confidence 3479999999986 99999999999999999999998 4555556666542 13456789999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF----KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~----~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
+|.++++++++++.+++|++|+||||||+.... .++.+.+.++|++++++|+.+++.++++++|.|+ ++|+||
T Consensus 66 ~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~Iv 142 (262)
T PRK07984 66 AEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN---PGSALL 142 (262)
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc---CCcEEE
Confidence 999999999999999999999999999985421 1156788999999999999999999999999764 247999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
++||. ++..+.|++..|++||+|+++|+++|+.|++++||+||+|+||+++|++...... . .... ......
T Consensus 143 ~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~-~~~~------~~~~~~ 213 (262)
T PRK07984 143 TLSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-F-RKML------AHCEAV 213 (262)
T ss_pred EEecC-CCCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-h-HHHH------HHHHHc
Confidence 99987 5667788899999999999999999999999999999999999999986432111 0 0000 011122
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+++++..|++++..+.||+++...++++..+..++++
T Consensus 214 ~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~ 251 (262)
T PRK07984 214 TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251 (262)
T ss_pred CCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence 34566677788888888999887666665555555543
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=297.37 Aligned_cols=241 Identities=17% Similarity=0.198 Sum_probs=191.1
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||+ +|||+++|++|+++|++|++++|+.+.. +..+++.+. . ....+++||++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~----------------~-~~~~~~~~D~~ 70 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEE----------------L-DAPIFLPLDVR 70 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHh----------------h-ccceEEecCcC
Confidence 36999999998 5999999999999999999999986532 223333331 1 13457899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|++|+||||||+..+ ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 71 ~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~i 147 (258)
T PRK07533 71 EPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTM 147 (258)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEE
Confidence 9999999999999999999999999998542 256778999999999999999999999999999953 5799999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++....... . ... .+...+.+
T Consensus 148 ss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~-~-~~~------~~~~~~~p 218 (258)
T PRK07533 148 SYY-GAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDF-D-ALL------EDAAERAP 218 (258)
T ss_pred ecc-ccccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCc-H-HHH------HHHHhcCC
Confidence 987 56677888899999999999999999999999999999999999999985432110 0 000 01112233
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++++..|++++..+.||+++...++++..+..+|++
T Consensus 219 ~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~ 254 (258)
T PRK07533 219 LRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGY 254 (258)
T ss_pred cCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCcc
Confidence 456667777888888999887766666666665554
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-40 Score=297.23 Aligned_cols=243 Identities=23% Similarity=0.275 Sum_probs=202.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+++++++..+++.... .+.++.++++|++|++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~~~~ 71 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV---------------AGARVLAVPADVTDAA 71 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc---------------CCceEEEEEccCCCHH
Confidence 6999999999999999999999999999999999998888887775421 2346888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. ++
T Consensus 72 ~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~~ 148 (260)
T PRK07063 72 SVAAAVAAAEEAFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIAST-HA 148 (260)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECCh-hh
Confidence 999999999999999999999999865 4666788999999999999999999999999999876 46899999987 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH-----HHHHHh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-----VARTLV 246 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-----~a~~~~ 246 (347)
..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+++|++......... .++. ....++
T Consensus 149 ~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 219 (260)
T PRK07063 149 FKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQP---------DPAAARAETLALQPM 219 (260)
T ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccC---------ChHHHHHHHHhcCCC
Confidence 77888889999999999999999999999999999999999999998543211000 1111 112235
Q ss_pred hhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 247 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++..|++++..+.||+++...++++..+..+|++
T Consensus 220 ~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~ 254 (260)
T PRK07063 220 KRIGRPEEVAMTAVFLASDEAPFINATCITIDGGR 254 (260)
T ss_pred CCCCCHHHHHHHHHHHcCccccccCCcEEEECCCe
Confidence 66777888888888999887766666666555543
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=297.39 Aligned_cols=248 Identities=19% Similarity=0.255 Sum_probs=196.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|+.|+++|++|++++|+ +++++..+++++ .+.++.++.+|+++.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 66 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS-----------------NGGKAKAYHVDISDE 66 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh-----------------cCCeEEEEEeecCCH
Confidence 36999999999999999999999999999999999 777777777754 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.....++.+.+.+.|++++++|+.+++.++++++|+|+++ +|+||++||. +
T Consensus 67 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~-~ 143 (272)
T PRK08589 67 QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSF-S 143 (272)
T ss_pred HHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCch-h
Confidence 999999999999999999999999986434567788999999999999999999999999999875 4899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|++|+.++||+||+|+||+|+|++................. .......+++++.
T Consensus 144 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 221 (272)
T PRK08589 144 GQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFR--ENQKWMTPLGRLG 221 (272)
T ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHh--hhhhccCCCCCCc
Confidence 77777888999999999999999999999999999999999999999865322111100000000 0000011234455
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..++++
T Consensus 222 ~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 222 KPEEVAKLVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred CHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence 6666777777888776655555555555543
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=296.80 Aligned_cols=242 Identities=14% Similarity=0.167 Sum_probs=192.0
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||+ +|||+++|+.|+++|++|++++|+. +..+.++++.+. . .....+++|++
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~----------------~-~~~~~~~~Dl~ 70 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAE----------------L-GAFVAGHCDVT 70 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHh----------------c-CCceEEecCCC
Confidence 46999999997 8999999999999999999999873 233344444332 1 12456899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|+++++++++++.+++|++|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 71 ~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~i 147 (272)
T PRK08159 71 DEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTL 147 (272)
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEE
Confidence 9999999999999999999999999998642 256778999999999999999999999999999963 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.|++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++...... . .... ...-...+
T Consensus 148 ss~-~~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~-~~~~------~~~~~~~p 218 (272)
T PRK08159 148 TYY-GAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD-F-RYIL------KWNEYNAP 218 (272)
T ss_pred ecc-ccccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc-c-hHHH------HHHHhCCc
Confidence 987 5677788999999999999999999999999999999999999999987432111 0 0000 00001234
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+++...|+++++.+.||+++...++++..+..+|++.
T Consensus 219 ~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~ 255 (272)
T PRK08159 219 LRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH 255 (272)
T ss_pred ccccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence 4566677888888889998877677777776666653
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=292.94 Aligned_cols=242 Identities=25% Similarity=0.302 Sum_probs=194.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|++++++++.+++++ .+.++.++.+|+++.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 67 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRA-----------------EGGEAVALAGDVRDE 67 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCCH
Confidence 368999999999999999999999999999999999988888777765 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+..+..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||. +
T Consensus 68 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~-~ 145 (254)
T PRK07478 68 AYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTF-V 145 (254)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEech-H
Confidence 999999999999999999999999986434677889999999999999999999999999999877 57899999987 4
Q ss_pred CC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH-HHHhhh
Q 019009 171 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-RTLVPR 248 (347)
Q Consensus 171 ~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-~~~~~~ 248 (347)
+. .+.+.+..|++||+|++.|+++|+.|+.+.||+||+|+||+++|++........ ... +... ....++
T Consensus 146 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~-------~~~~~~~~~~~ 216 (254)
T PRK07478 146 GHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTP--EAL-------AFVAGLHALKR 216 (254)
T ss_pred hhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCH--HHH-------HHHHhcCCCCC
Confidence 43 567888999999999999999999999999999999999999999764321110 000 0000 012234
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+..|++++..+.||+++...++++..+..+|+
T Consensus 217 ~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 217 MAQPEEIAQAALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred CcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence 44556666666677776654544544444443
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=295.31 Aligned_cols=223 Identities=25% Similarity=0.354 Sum_probs=194.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++||||||+|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~-----------------~g~~~~~~~~Dv~d~ 68 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA-----------------LGAEVLVVPTDVTDA 68 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeCCCH
Confidence 369999999999999999999999999999999999999888888765 446788899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.+|++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|+|+++ +.|+||+++|. .
T Consensus 69 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS~-~ 145 (330)
T PRK06139 69 DQVKALATQAASFGGRIDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMISL-G 145 (330)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcCh-h
Confidence 9999999999999999999999999876 5788999999999999999999999999999999987 47899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCC-CeEEEEeeCCcccCcccccCcccchhhh-hhhccCCHHHHHHHHhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRS-KVGVHTASPGMVLTDLLLSGSTIQNKQM-FNIICELPETVARTLVPR 248 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~-gI~v~~i~PG~v~T~~~~~~~~~~~~~~-~~~~~~~pe~~a~~~~~~ 248 (347)
+..+.|+...|++||+|+.+|+++|+.|+.+. ||+|++|+||+++|++............ ......+||++|+.++..
T Consensus 146 ~~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~ 225 (330)
T PRK06139 146 GFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRL 225 (330)
T ss_pred hcCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHH
Confidence 77888899999999999999999999999874 8999999999999998654322111111 122345899999999988
Q ss_pred hhhcc
Q 019009 249 IRVVK 253 (347)
Q Consensus 249 ~~~~~ 253 (347)
+..++
T Consensus 226 ~~~~~ 230 (330)
T PRK06139 226 ADRPR 230 (330)
T ss_pred HhCCC
Confidence 76654
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=295.70 Aligned_cols=189 Identities=23% Similarity=0.317 Sum_probs=170.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---------hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS---------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~---------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
.+|++|||||++|||+++|++|+++|++|++++|+. +++++..+++.+ .+.++.
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~ 67 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-----------------AGGEAV 67 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHh-----------------cCCceE
Confidence 469999999999999999999999999999999876 667777777654 345688
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC---
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK--- 158 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~--- 158 (347)
++.+|++|.++++++++.+.+++|+||+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++..
T Consensus 68 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 146 (286)
T PRK07791 68 ANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGR 146 (286)
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCC
Confidence 8999999999999999999999999999999999876 467889999999999999999999999999999976421
Q ss_pred --CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 159 --GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 159 --~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
.|+||++||. ++..+.+++..|++||+|+++|+++|+.|++++||+||+|+|| +.|++.
T Consensus 147 ~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~ 207 (286)
T PRK07791 147 AVDARIINTSSG-AGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT 207 (286)
T ss_pred CCCcEEEEeCch-hhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc
Confidence 3799999987 6777888999999999999999999999999999999999999 899875
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=294.48 Aligned_cols=243 Identities=16% Similarity=0.142 Sum_probs=189.6
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|+++||||+ +|||+++|++|+++|++|++++|+... ++..+++.+.. .+.++..+++|++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~---------------~~~~~~~~~~Dv~ 69 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTL---------------EGQESLLLPCDVT 69 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHc---------------CCCceEEEecCCC
Confidence 46999999997 899999999999999999999876422 12223332211 1246788999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|++|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|.+ +|+||++
T Consensus 70 d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~i 146 (257)
T PRK08594 70 SDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTL 146 (257)
T ss_pred CHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEE
Confidence 9999999999999999999999999997531 256778999999999999999999999999999963 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.+++..|++||+|+++|+++|+.|++++||+||+|+||+++|++...... ..... .+...+.+
T Consensus 147 sS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~-------~~~~~~~p 217 (257)
T PRK08594 147 TYL-GGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNSIL-------KEIEERAP 217 (257)
T ss_pred ccc-CCccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccHHH-------HHHhhcCC
Confidence 998 6777788889999999999999999999999999999999999999997432111 00000 00011223
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+.+...|++++..+.||+++...++++..+..+|++
T Consensus 218 ~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~ 253 (257)
T PRK08594 218 LRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY 253 (257)
T ss_pred ccccCCHHHHHHHHHHHcCcccccccceEEEECCch
Confidence 455666777777778888887766666665555543
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=294.98 Aligned_cols=247 Identities=19% Similarity=0.230 Sum_probs=202.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.. .+.++..+.+|++|.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~ 71 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF---------------PGARLLAARCDVLDE 71 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC---------------CCceEEEEEecCCCH
Confidence 46999999999999999999999999999999999999888887776532 124788899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|+++ +.|+||++||. +
T Consensus 72 ~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 148 (265)
T PRK07062 72 ADVAAFAAAVEARFGGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSL-L 148 (265)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEeccc-c
Confidence 9999999999999999999999999875 4778889999999999999999999999999999876 46899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH----H---HH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET----V---AR 243 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~----~---a~ 243 (347)
+..+.++...|+++|+|+.+|+++|+.|+.+.||+||+|+||+++|++.......... .....++ + ..
T Consensus 149 ~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 223 (265)
T PRK07062 149 ALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARAD-----PGQSWEAWTAALARKKG 223 (265)
T ss_pred ccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhc-----cCCChHHHHHHHhhcCC
Confidence 7777888899999999999999999999999999999999999999985432110000 0000111 1 11
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.+++++..|++++..+.||+++...++++..+..+|+
T Consensus 224 ~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 224 IPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred CCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 2345667778888888899988776666665555554
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=298.94 Aligned_cols=254 Identities=18% Similarity=0.141 Sum_probs=192.5
Q ss_pred cCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGa--s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..||++||||| |+|||+++|+.|+++|++|++ +|+.+++++...++.+.......... ..........+.+|+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~D~ 81 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLP----DGSLMEITKVYPLDA 81 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcc----cccccCcCeeeecce
Confidence 45799999999 899999999999999999999 89999998888777531000000000 000011245788898
Q ss_pred --CC------------------HHHHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHH
Q 019009 88 --CE------------------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCT 146 (347)
Q Consensus 88 --s~------------------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~ 146 (347)
++ .++++++++++.+++|+||+||||||+.. ...++.+.+.|+|++++++|+++++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~ 161 (303)
T PLN02730 82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL 161 (303)
T ss_pred ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 43 34899999999999999999999998643 1378889999999999999999999999
Q ss_pred HHHHHHhHcCCCCcEEEEEcCCCCCCCCCCCc-chhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcccccCcc
Q 019009 147 REAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGST 224 (347)
Q Consensus 147 ~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~-~~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~~~~~~~ 224 (347)
++++|+|++ +|+||++||. ++..+.|++ ..|++||+|+++|+++|+.|+++ +|||||+|+||+|+|+|......
T Consensus 162 ~~~~p~m~~---~G~II~isS~-a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~ 237 (303)
T PLN02730 162 QHFGPIMNP---GGASISLTYI-ASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF 237 (303)
T ss_pred HHHHHHHhc---CCEEEEEech-hhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc
Confidence 999999975 3899999987 566677765 58999999999999999999986 79999999999999998643110
Q ss_pred cchhhhhhhccCCHHHH-HHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 225 IQNKQMFNIICELPETV-ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 225 ~~~~~~~~~~~~~pe~~-a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
... . .+.. ...++.++..|++++..+.||+++...++++..+..++++
T Consensus 238 -~~~-~-------~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~ 286 (303)
T PLN02730 238 -IDD-M-------IEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGL 286 (303)
T ss_pred -cHH-H-------HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence 000 0 0111 1113455666777888888999887766666666665554
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=291.17 Aligned_cols=244 Identities=18% Similarity=0.234 Sum_probs=194.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+++|++|+++|++|++++| +++++++..++++.. .+.++.++++|++|
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~ 70 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK----------------YGIKAKAYPLNILE 70 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh----------------cCCceEEEEcCCCC
Confidence 4699999999999999999999999999999875 566666666666542 23578899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCC-----CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNK-----GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~-----~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
+++++++++++.++++++|+||||||+.. ...++.+.+.+++++++++|+.+++.+++.++|.|+++ +.|+||+
T Consensus 71 ~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~ 149 (260)
T PRK08416 71 PETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIIS 149 (260)
T ss_pred HHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEE
Confidence 99999999999999999999999998742 13567788899999999999999999999999999876 4689999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
+||. ++..+.|++..|++||+|+++|+++|+.|+.++||+||+|+||+++|++....... .... .+.....
T Consensus 150 isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~--~~~~------~~~~~~~ 220 (260)
T PRK08416 150 LSST-GNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY--EEVK------AKTEELS 220 (260)
T ss_pred Eecc-ccccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC--HHHH------HHHHhcC
Confidence 9997 56677888899999999999999999999999999999999999999985432210 0000 0011112
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+..++..|++++..+.||+++...++++..+..+++
T Consensus 221 ~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 221 PLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred CCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 344556677777777788887665555555444443
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=292.64 Aligned_cols=241 Identities=11% Similarity=0.069 Sum_probs=186.1
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGa--s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|+++|||| ++|||+++|++|+++|++|++++|.. +.++..+++.+. .+ ....+++|++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~----------------~~-~~~~~~~Dv~ 66 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAE----------------FG-SDLVFPCDVA 66 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHh----------------cC-CcceeeccCC
Confidence 3699999996 68999999999999999999987652 222333333331 11 2346899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCC---CC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KP-LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~-~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
|+++++++++.+.+++|++|+||||||+.... .+ +.+.+.++|++++++|+.+++.++++++|+|. +.|+||+
T Consensus 67 d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~---~~g~Ii~ 143 (260)
T PRK06997 67 SDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS---DDASLLT 143 (260)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC---CCceEEE
Confidence 99999999999999999999999999986421 12 35678999999999999999999999999994 2579999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
+||. ++..+.+.+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++...... . .... .+..++.
T Consensus 144 iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~-~~~~------~~~~~~~ 214 (260)
T PRK06997 144 LSYL-GAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-F-GKIL------DFVESNA 214 (260)
T ss_pred Eecc-ccccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-h-hhHH------HHHHhcC
Confidence 9987 5677788889999999999999999999999999999999999999986432110 0 0000 0111122
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++++...|+++++.+.||+++...++++..+..+|++
T Consensus 215 p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 215 PLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGF 251 (260)
T ss_pred cccccCCHHHHHHHHHHHhCccccCcceeEEEEcCCh
Confidence 4556667788888888998887666666666655544
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-39 Score=291.02 Aligned_cols=246 Identities=22% Similarity=0.224 Sum_probs=201.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||++|||+++|++|+++|++|++++|+++++++..+++++ . .++.++.+|++|.+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~-~~~~~~~~Dv~d~~~~ 63 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE-----------------Y-GEVYAVKADLSDKDDL 63 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------c-CCceEEEcCCCCHHHH
Confidence 699999999999999999999999999999999988888887754 2 2577899999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+++++++.++++++|+||||||.... ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+++++|+||++||. ++.
T Consensus 64 ~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~-~~~ 142 (259)
T PRK08340 64 KNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSV-SVK 142 (259)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCc-ccC
Confidence 99999999999999999999997531 2457788899999999999999999999999998754357899999987 667
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHH-----HHHHHHhh
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE-----TVARTLVP 247 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe-----~~a~~~~~ 247 (347)
.+.+....|++||+|+.+|+++|+.|++++||+||+|+||+++|++.........+.. ....++ ...+.+++
T Consensus 143 ~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~ 219 (259)
T PRK08340 143 EPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEER---GVSFEETWEREVLERTPLK 219 (259)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhcc---CCchHHHHHHHHhccCCcc
Confidence 7788889999999999999999999999999999999999999998632111000000 000011 12233456
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++..|++++..+.||+++...++++..+..+|++
T Consensus 220 r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 220 RTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred CCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence 7788899999999999998877777776666654
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=279.60 Aligned_cols=215 Identities=19% Similarity=0.220 Sum_probs=185.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+++||||++|||+++|++|+ +|++|++++|++++++++.+++++. .+..+.+++||++|.++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~d~~~ 63 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR----------------GATSVHVLSFDAQDLDT 63 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc----------------cCCceEEEEcccCCHHH
Confidence 579999999999999999999 5999999999999999888888652 12347789999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++++.+.+|++|++|||||+.. ..+..+.+.+.+++++++|+.+++.+++.++|.|.+++.+|+||++||. ++.
T Consensus 64 v~~~~~~~~~~~g~id~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~-~~~ 141 (246)
T PRK05599 64 HRELVKQTQELAGEISLAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSI-AGW 141 (246)
T ss_pred HHHHHHHHHHhcCCCCEEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecc-ccc
Confidence 99999999999999999999999865 2455667778889999999999999999999999876446899999998 677
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhc
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~ 252 (347)
.+.++...|++||+|+++|+++|+.|+.++||+||+|+||+++|++....... ....+||++|+.++..+...
T Consensus 142 ~~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~-------~~~~~pe~~a~~~~~~~~~~ 214 (246)
T PRK05599 142 RARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA-------PMSVYPRDVAAAVVSAITSS 214 (246)
T ss_pred cCCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC-------CCCCCHHHHHHHHHHHHhcC
Confidence 78888999999999999999999999999999999999999999985432110 11247999999999888764
Q ss_pred c
Q 019009 253 K 253 (347)
Q Consensus 253 ~ 253 (347)
.
T Consensus 215 ~ 215 (246)
T PRK05599 215 K 215 (246)
T ss_pred C
Confidence 3
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=289.86 Aligned_cols=238 Identities=13% Similarity=0.078 Sum_probs=182.8
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 11 CTCRWFSVVS--TRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 11 ~~k~vlITGa--s~GIG~aiA~~la~~G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+|+++|||| ++|||+++|++|+++|++|++++|+. +.+++..+++ +.++.++++|
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~--------------------~~~~~~~~~D 65 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL--------------------PEPAPVLELD 65 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc--------------------CCCCcEEeCC
Confidence 3699999999 89999999999999999999999874 2233332222 2256788999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
++|.++++++++++.+++|++|+||||||+.... .++.+.+.++|++++++|+.+++.++++++|+|++ +|+||
T Consensus 66 v~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv 142 (256)
T PRK07889 66 VTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIV 142 (256)
T ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEE
Confidence 9999999999999999999999999999986421 35778889999999999999999999999999973 47899
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
++++. +..+.|.+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++....... .. .. .....+
T Consensus 143 ~is~~--~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-~~-~~------~~~~~~ 212 (256)
T PRK07889 143 GLDFD--ATVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-EL-LE------EGWDER 212 (256)
T ss_pred EEeec--ccccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-HH-HH------HHHHhc
Confidence 99865 3455678888999999999999999999999999999999999999975432110 00 00 000111
Q ss_pred HHhh-hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 TLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+++ ++..|++++..+.||+++...++++..+..++++
T Consensus 213 ~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~ 251 (256)
T PRK07889 213 APLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGA 251 (256)
T ss_pred CccccccCCHHHHHHHHHHHhCcccccccceEEEEcCce
Confidence 1233 3556667777777888776655555555554443
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=285.70 Aligned_cols=243 Identities=18% Similarity=0.231 Sum_probs=195.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||+++||||++|||+++|++|+++|++|++++|+.. ++..+++.+ .+.++..+.+|++|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~-----------------~~~~~~~~~~Dl~~ 68 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTA-----------------LGRRFLSLTADLRK 68 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHh-----------------cCCeEEEEECCCCC
Confidence 34699999999999999999999999999999887643 344445543 23467889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|++|||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.+|+||++||.
T Consensus 69 ~~~~~~~~~~~~~~~~~~D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~- 146 (253)
T PRK08993 69 IDGIPALLERAVAEFGHIDILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASM- 146 (253)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECch-
Confidence 99999999999999999999999999865 4678889999999999999999999999999999876446899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
.+..+.+....|++||+|+++++++++.|+.++||+||+|+||+++|++........ ... .+.....+..+.
T Consensus 147 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~--~~~------~~~~~~~p~~r~ 218 (253)
T PRK08993 147 LSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADE--QRS------AEILDRIPAGRW 218 (253)
T ss_pred hhccCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccch--HHH------HHHHhcCCCCCC
Confidence 567777888999999999999999999999999999999999999999864321100 000 011112234556
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 219 ~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~ 250 (253)
T PRK08993 219 GLPSDLMGPVVFLASSASDYINGYTIAVDGGW 250 (253)
T ss_pred cCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence 66777777778888887766666555555443
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=285.76 Aligned_cols=242 Identities=22% Similarity=0.277 Sum_probs=197.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.+ .+++..++++. .+.++..+.+|++|
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~ 69 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-----------------AGRRAIQIAADVTS 69 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-----------------cCCceEEEEcCCCC
Confidence 3699999999999999999999999999999999764 45666666654 34567889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 70 ~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~- 146 (254)
T PRK06114 70 KADLRAAVARTEAELGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIASM- 146 (254)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECch-
Confidence 99999999999999999999999999876 4678889999999999999999999999999999876 47899999987
Q ss_pred CCCCCCC--CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 170 SGGSSTP--LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 170 ~~~~~~~--~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
++..+.+ ....|+++|+|+++|+++|+.|+.++||+||+|+||+++|++..... ..+. ..+.....+++
T Consensus 147 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~--~~~~-------~~~~~~~~p~~ 217 (254)
T PRK06114 147 SGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPE--MVHQ-------TKLFEEQTPMQ 217 (254)
T ss_pred hhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccccc--chHH-------HHHHHhcCCCC
Confidence 4544443 36899999999999999999999999999999999999999854211 0000 01111223456
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++..|++++..+.||+++...++++..+..+|++
T Consensus 218 r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~ 251 (254)
T PRK06114 218 RMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGF 251 (254)
T ss_pred CCcCHHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence 6777788888888999887766666666655544
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=282.20 Aligned_cols=223 Identities=23% Similarity=0.320 Sum_probs=191.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.+++++..++++. .+.++.++.+|++|.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~-----------------~~~~~~~~~~Dv~d~ 67 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRA-----------------EGFDVHGVMCDVRHR 67 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEeCCCCCH
Confidence 369999999999999999999999999999999999888887777754 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.+++|++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|.+++.+|+||++||. +
T Consensus 68 ~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~-~ 145 (275)
T PRK05876 68 EEVTHLADEAFRLLGHVDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASF-A 145 (275)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCh-h
Confidence 9999999999999999999999999876 4788899999999999999999999999999999876447899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch------------hhh-hhhccCC
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN------------KQM-FNIICEL 237 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~------------~~~-~~~~~~~ 237 (347)
+..+.++...|++||+|+.+|+++|+.|+.+.||+|++|+||+++|++......... ... ......+
T Consensus 146 ~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (275)
T PRK05876 146 GLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLG 225 (275)
T ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCC
Confidence 777888899999999999999999999999999999999999999998643211000 000 0011357
Q ss_pred HHHHHHHHhhhhhhc
Q 019009 238 PETVARTLVPRIRVV 252 (347)
Q Consensus 238 pe~~a~~~~~~~~~~ 252 (347)
|+++|+.++..+...
T Consensus 226 ~~dva~~~~~ai~~~ 240 (275)
T PRK05876 226 VDDIAQLTADAILAN 240 (275)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999888644
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=283.10 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=200.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||+++++.|+++|++|++++|+.+++++...++.+ .+.++.++++|+++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~~ 64 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK-----------------DGGKAIAVKADVSDRD 64 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCCCHH
Confidence 68999999999999999999999999999999999888877777754 3356888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|++|||||+.. ..++.+.+.+++++++++|+.+++.+++.+++.|++.+..++||++||. .+
T Consensus 65 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~ 142 (256)
T PRK08643 65 QVFAAVRQVVDTFGDLNVVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQ-AG 142 (256)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcc-cc
Confidence 999999999999999999999999865 4778889999999999999999999999999999876446899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhcc-CCHHHHHHHHhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC-ELPETVARTLVPRIR 250 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~-~~pe~~a~~~~~~~~ 250 (347)
..+.++...|+++|++++.|++.++.|+.+.||+||+|+||+++|++................. .......+.+.+++.
T Consensus 143 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T PRK08643 143 VVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLS 222 (256)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCc
Confidence 7778888999999999999999999999999999999999999999864321100000000000 001111222345556
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.+++++..+.||+++...++++..+..+++
T Consensus 223 ~~~~va~~~~~L~~~~~~~~~G~~i~vdgg 252 (256)
T PRK08643 223 EPEDVANCVSFLAGPDSDYITGQTIIVDGG 252 (256)
T ss_pred CHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 677788888888888776666655555544
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=285.64 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=202.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+.+++++..+++++ .+.++.++++|++|.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 71 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA-----------------AGGEALAVKADVLDK 71 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCCCH
Confidence 369999999999999999999999999999999998888877777754 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCC--------------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGF--------------KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ 156 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~--------------~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~ 156 (347)
+++.++++++.++++++|+||||||...+. .++.+.+.++|++++++|+.+++.++++++|.|+++
T Consensus 72 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 151 (278)
T PRK08277 72 ESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR 151 (278)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999975321 346788899999999999999999999999999876
Q ss_pred CCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccC
Q 019009 157 PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE 236 (347)
Q Consensus 157 ~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~ 236 (347)
+.|+||++||. ++..+.++...|++||+|+++|+++++.|+.+.||+||+|+||++.|++.............. .
T Consensus 152 -~~g~ii~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~---~ 226 (278)
T PRK08277 152 -KGGNIINISSM-NAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTE---R 226 (278)
T ss_pred -CCcEEEEEccc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchh---H
Confidence 47899999987 677788889999999999999999999999999999999999999999753221100000000 0
Q ss_pred CHHHHHHHHhhhhhhccccccceeeccch-HHHHHHhhhhhcCCcc
Q 019009 237 LPETVARTLVPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRW 281 (347)
Q Consensus 237 ~pe~~a~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~ 281 (347)
..+...+.+++++..|++++.++.||+++ ...++++..+..+|++
T Consensus 227 ~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~ 272 (278)
T PRK08277 227 ANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272 (278)
T ss_pred HHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence 00111223456677788888888899998 6766666666666654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=282.72 Aligned_cols=242 Identities=19% Similarity=0.256 Sum_probs=199.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..++++. .+.++..+.+|++|.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~ 70 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ-----------------EGIKAHAAPFNVTHK 70 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEecCCCCH
Confidence 479999999999999999999999999999999999888888777755 335678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.++++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|.++ +.++||++||. .
T Consensus 71 ~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~-~ 147 (254)
T PRK08085 71 QEVEAAIEHIEKDIGPIDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-QAGKIINICSM-Q 147 (254)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEccc-h
Confidence 9999999999999999999999999865 4778889999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+....|+++|+|+++++++++.|++++||+||+|+||+++|++....... +... .......++.++.
T Consensus 148 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~------~~~~~~~p~~~~~ 219 (254)
T PRK08085 148 SELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--EAFT------AWLCKRTPAARWG 219 (254)
T ss_pred hccCCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--HHHH------HHHHhcCCCCCCc
Confidence 6677788899999999999999999999999999999999999999986432211 0000 0001122345556
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.|++++..+.||+++...++++..+..+|+
T Consensus 220 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgg 249 (254)
T PRK08085 220 DPQELIGAAVFLSSKASDFVNGHLLFVDGG 249 (254)
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 677777777888887766665555555444
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=283.54 Aligned_cols=247 Identities=23% Similarity=0.229 Sum_probs=196.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|++++++++.+++ +.++.++++|++|.
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 64 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF--------------------GDHVLVVEGDVTSY 64 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCcceEEEccCCCH
Confidence 4699999999999999999999999999999999988776554432 23577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHH----HHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE----IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~----~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++++++++++.++++++|+||||||+.....++.+.+.++ |++++++|+.+++.++++++|.|+++ +|+||+++
T Consensus 65 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~s 142 (263)
T PRK06200 65 ADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTL 142 (263)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEEC
Confidence 9999999999999999999999999864235566667665 88999999999999999999999764 58999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH-HHHHH
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VARTL 245 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-~a~~~ 245 (347)
|. ++..+.++...|++||+|+++|+++|+.|+++ +|+||+|+||+++|++....................+. ....+
T Consensus 143 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (263)
T PRK06200 143 SN-SSFYPGGGGPLYTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP 220 (263)
T ss_pred Ch-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC
Confidence 87 56677778889999999999999999999988 49999999999999985422110000000000000111 12234
Q ss_pred hhhhhhccccccceeeccchH-HHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 281 (347)
+.++..|++++..+.||+++. ..++++..+..+|++
T Consensus 221 ~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~ 257 (263)
T PRK06200 221 LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGL 257 (263)
T ss_pred CCCCCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence 667888999999999999987 777777777777665
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=286.22 Aligned_cols=233 Identities=27% Similarity=0.417 Sum_probs=200.6
Q ss_pred cCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHHHH
Q 019009 19 VST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKL 96 (347)
Q Consensus 19 Gas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~ 96 (347)
|++ +|||+++|++|+++|++|++++|+.+++++.++++.+.. +.+ .+.+|++++++++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~----------------~~~--~~~~D~~~~~~v~~~ 62 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY----------------GAE--VIQCDLSDEESVEAL 62 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT----------------TSE--EEESCTTSHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc----------------CCc--eEeecCcchHHHHHH
Confidence 666 999999999999999999999999999888888887642 233 499999999999999
Q ss_pred HHHHHhhc-CCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 97 SNFAVNEF-GSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 97 ~~~i~~~~-g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++.+++ |+||+||||+|...+ ..++.+.+.++|++.+++|+.+++.++++++|+|++ +|+||++||. ++.
T Consensus 63 ~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~-~~~ 138 (241)
T PF13561_consen 63 FDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSI-AAQ 138 (241)
T ss_dssp HHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEG-GGT
T ss_pred HHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccch-hhc
Confidence 99999999 999999999998763 367888999999999999999999999999998875 4899999988 677
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
.+.+++..|+++|+|+++|+++||.||++ +|||||+|+||+++|++...... .+.+ ......+.+++++..
T Consensus 139 ~~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~--~~~~------~~~~~~~~pl~r~~~ 210 (241)
T PF13561_consen 139 RPMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG--NEEF------LEELKKRIPLGRLGT 210 (241)
T ss_dssp SBSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT--HHHH------HHHHHHHSTTSSHBE
T ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcccc--ccch------hhhhhhhhccCCCcC
Confidence 78899999999999999999999999999 99999999999999998532211 0111 122345566788888
Q ss_pred ccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 252 VKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
|+|++.++.||+++...+++++.+..||++
T Consensus 211 ~~evA~~v~fL~s~~a~~itG~~i~vDGG~ 240 (241)
T PF13561_consen 211 PEEVANAVLFLASDAASYITGQVIPVDGGF 240 (241)
T ss_dssp HHHHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred HHHHHHHHHHHhCccccCccCCeEEECCCc
Confidence 999999999999999888888888887765
|
... |
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=279.95 Aligned_cols=237 Identities=22% Similarity=0.244 Sum_probs=187.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+++|++|+++|++|+++. |+.+++++..+++.. .+.++..+.+|+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~ 65 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-----------------NGGSAFSIGANLES 65 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEecccCC
Confidence 469999999999999999999999999999875 666777777666654 33467788999999
Q ss_pred HHHHHHHHHHHHhh----cC--CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 90 PADVQKLSNFAVNE----FG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 90 ~~~v~~~~~~i~~~----~g--~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.+++..+++++.+. ++ ++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|++ .|+||
T Consensus 66 ~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv 141 (252)
T PRK12747 66 LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRII 141 (252)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEE
Confidence 99999999888753 34 8999999999865 467888999999999999999999999999999974 47999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
++||. ++..+.++...|++||+|+++++++|+.|+.++||+||+|+||+|+|++....... +. .+....
T Consensus 142 ~isS~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~--~~--------~~~~~~ 210 (252)
T PRK12747 142 NISSA-ATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD--PM--------MKQYAT 210 (252)
T ss_pred EECCc-ccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC--HH--------HHHHHH
Confidence 99998 67778888899999999999999999999999999999999999999985432110 00 011111
Q ss_pred H--HhhhhhhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 244 T--LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 244 ~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
. ..+++..|++++..+.||+++...++++..+..+|
T Consensus 211 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg 248 (252)
T PRK12747 211 TISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG 248 (252)
T ss_pred hcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecC
Confidence 1 23445566777777778887665444444443333
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=280.55 Aligned_cols=241 Identities=22% Similarity=0.264 Sum_probs=194.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+ ++.++..+++.+ .+.++.++.+|+++.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 75 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK-----------------EGRKVTFVQVDLTKP 75 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh-----------------cCCceEEEEcCCCCH
Confidence 46999999999999999999999999999999998 555555555543 345688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.+|++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++ +.|+||++||. .
T Consensus 76 ~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 152 (258)
T PRK06935 76 ESAEKVVKEALEEFGKIDILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASM-L 152 (258)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEECCH-H
Confidence 9999999999999999999999999876 4778888999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+....|+++|+|+++|++++++|+.+.||+||+|+||+++|++.......... ..+...+...++..
T Consensus 153 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 224 (258)
T PRK06935 153 SFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNR--------NDEILKRIPAGRWG 224 (258)
T ss_pred hccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHH--------HHHHHhcCCCCCCC
Confidence 6677788899999999999999999999999999999999999999975322110000 00111122334556
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.+++++..+.||+++...++++..+..+++
T Consensus 225 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 225 EPDDLMGAAVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred CHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 667777777888888775555555544443
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=286.73 Aligned_cols=241 Identities=19% Similarity=0.238 Sum_probs=191.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||++|||+++|++|+++|++|++++|+. +.++++.+.+.+ .+.++.++.+|++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~ 110 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-----------------CGRKAVLLPGDLS 110 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-----------------cCCeEEEEEccCC
Confidence 358999999999999999999999999999988754 334444443332 3456788999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.+++.++++++.+.++++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|++ +++||++||.
T Consensus 111 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~ 187 (294)
T PRK07985 111 DEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSI 187 (294)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCc
Confidence 9999999999999999999999999997543467888999999999999999999999999999964 4799999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... .... ++...+.++++
T Consensus 188 -~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~--~~~~------~~~~~~~~~~r 258 (294)
T PRK07985 188 -QAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT--QDKI------PQFGQQTPMKR 258 (294)
T ss_pred -hhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCC--HHHH------HHHhccCCCCC
Confidence 67777888899999999999999999999999999999999999999985321100 0000 11111223455
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
...|++++..+.||+++...++++..+..+|+
T Consensus 259 ~~~pedva~~~~fL~s~~~~~itG~~i~vdgG 290 (294)
T PRK07985 259 AGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290 (294)
T ss_pred CCCHHHHHHHHHhhhChhcCCccccEEeeCCC
Confidence 66677778888889888765555555544443
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=271.11 Aligned_cols=187 Identities=14% Similarity=0.119 Sum_probs=168.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++..+.+|++|.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~-----------------~~~~~~~~~~D~~~~ 66 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSA-----------------LTDNVYSFQLKDFSQ 66 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCCeEEEEccCCCH
Confidence 469999999999999999999999999999999999999888888765 345677899999999
Q ss_pred HHHHHHHHHHHhhcC-CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g-~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.+++| +||+||||||......++.+.+.++|.+.+++|+.+++.+++.++|+|++++++|+||++||.
T Consensus 67 ~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~- 145 (227)
T PRK08862 67 ESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISH- 145 (227)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecC-
Confidence 999999999999999 999999999865434678899999999999999999999999999999876457899999986
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.+ .+++..|++||+|+.+|+++|+.|++++||+||+|+||+++|+.
T Consensus 146 ~~---~~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 146 DD---HQDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred CC---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 33 35678899999999999999999999999999999999999983
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=278.36 Aligned_cols=242 Identities=21% Similarity=0.304 Sum_probs=193.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+ .+.++..+.+|+++.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 69 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA-----------------AGGKAEALACHIGEM 69 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCCCH
Confidence 369999999999999999999999999999999999888887777755 345677899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.++++|++|||||......++.+.+.+++++.+++|+.+++.++++++|+|+++ +.++||++||. .
T Consensus 70 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~ 147 (252)
T PRK07035 70 EQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSIVNVASV-N 147 (252)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEEEEECch-h
Confidence 999999999999999999999999975434667788999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+++..|++||+++++|++++++|+.++||+|++|+||+++|++........ ... .+.....+..+..
T Consensus 148 ~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~------~~~~~~~~~~~~~ 219 (252)
T PRK07035 148 GVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKND--AIL------KQALAHIPLRRHA 219 (252)
T ss_pred hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCH--HHH------HHHHccCCCCCcC
Confidence 66778888999999999999999999999999999999999999999864432111 000 0111111233444
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCC
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
.|++++..+.|++++.....++..+..+|
T Consensus 220 ~~~~va~~~~~l~~~~~~~~~g~~~~~dg 248 (252)
T PRK07035 220 EPSEMAGAVLYLASDASSYTTGECLNVDG 248 (252)
T ss_pred CHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence 55556666667777665444444443333
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=280.70 Aligned_cols=237 Identities=20% Similarity=0.253 Sum_probs=193.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dl~~~~ 65 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--------------------GERARFIATDITDDA 65 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCeeEEEEecCCCHH
Confidence 599999999999999999999999999999999988776655443 246788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++.+.++++++|+||||||... ... .+.+.++|++.+++|+.+++.++++++|+|+ + ++|+||++||. ++
T Consensus 66 ~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~~g~ii~isS~-~~ 140 (261)
T PRK08265 66 AIERAVATVVARFGRVDILVNLACTYL-DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-GGGAIVNFTSI-SA 140 (261)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCC-CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-CCcEEEEECch-hh
Confidence 999999999999999999999999864 233 3678899999999999999999999999997 3 47899999987 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH--HHHhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA--RTLVPRI 249 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a--~~~~~~~ 249 (347)
..+.+++..|+++|+++++|+++++.|+.++||+||+|+||+++|++........... .+... ..+++++
T Consensus 141 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~--------~~~~~~~~~p~~r~ 212 (261)
T PRK08265 141 KFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAK--------ADRVAAPFHLLGRV 212 (261)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhH--------HHHhhcccCCCCCc
Confidence 7788889999999999999999999999999999999999999999864321110000 01111 1234556
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 213 ~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 213 GDPEEVAQVVAFLCSDAASFVTGADYAVDGGY 244 (261)
T ss_pred cCHHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence 66777778888888877766677766666665
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=280.47 Aligned_cols=245 Identities=20% Similarity=0.196 Sum_probs=190.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+. .+.++..+.+|++|.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~--------------------~~~~~~~~~~D~~~~ 63 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA--------------------HGDAVVGVEGDVRSL 63 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--------------------cCCceEEEEeccCCH
Confidence 369999999999999999999999999999999998766554321 234678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCH----HHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN----EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~----e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+++.++++++.++++++|+||||||+.....++.+.+. ++|++++++|+.+++.++++++|.|.++ +|+||+++
T Consensus 64 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~s 141 (262)
T TIGR03325 64 DDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTI 141 (262)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEe
Confidence 99999999999999999999999997532234444443 5799999999999999999999999865 47899998
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH--HH
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA--RT 244 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a--~~ 244 (347)
|. .+..+.++...|++||+|+++|+++|+.|+++. |+||+|+||+++|+|.............. ....++.. ..
T Consensus 142 S~-~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 217 (262)
T TIGR03325 142 SN-AGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSIS--TVPLGDMLKSVL 217 (262)
T ss_pred cc-ceecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcccccccccccccc--ccchhhhhhhcC
Confidence 87 566777788899999999999999999999986 99999999999999854321000000000 00112221 23
Q ss_pred HhhhhhhccccccceeeccchH-HHHHHhhhhhcCCcc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 281 (347)
++++...|++++..+.||+++. ..++++..+..+|++
T Consensus 218 p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~ 255 (262)
T TIGR03325 218 PIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM 255 (262)
T ss_pred CCCCCCChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence 4678888999999999999873 445666666666654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=276.33 Aligned_cols=239 Identities=25% Similarity=0.337 Sum_probs=193.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||.++|++|+++|++|++++|+++++++..+++++ .+.++..+.+|+++.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 68 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE-----------------AGGEALFVACDVTRD 68 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcCCCCH
Confidence 469999999999999999999999999999999999888877777755 345688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.+.+.++++|++|||||...+..++.+.+.+++++++++|+.+++.++++++|.|.++ +.++||++||. .
T Consensus 69 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~-~ 146 (253)
T PRK06172 69 AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASV-A 146 (253)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECch-h
Confidence 999999999999999999999999986533557888999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+++..|+++|+|+++|+++|+.|+.+.||+|++|+||+++|++......... ..... .....+..+..
T Consensus 147 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~-~~~~~------~~~~~~~~~~~ 219 (253)
T PRK06172 147 GLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADP-RKAEF------AAAMHPVGRIG 219 (253)
T ss_pred hccCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccCh-HHHHH------HhccCCCCCcc
Confidence 677888899999999999999999999999999999999999999998654321100 00000 00111233445
Q ss_pred hccccccceeeccchHHHHHHhhhh
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAW 275 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~ 275 (347)
.|++++..+.||+++...+.++..+
T Consensus 220 ~p~~ia~~~~~l~~~~~~~~~G~~i 244 (253)
T PRK06172 220 KVEEVASAVLYLCSDGASFTTGHAL 244 (253)
T ss_pred CHHHHHHHHHHHhCccccCcCCcEE
Confidence 5666666677777766544434333
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=280.49 Aligned_cols=222 Identities=26% Similarity=0.323 Sum_probs=191.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|+.|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~-----------------~g~~~~~v~~Dv~d~ 69 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRA-----------------AGGEALAVVADVADA 69 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------cCCcEEEEEecCCCH
Confidence 358999999999999999999999999999999999998888888765 456788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+++|++|+||||||... ..++.+.+.+++++++++|+.+++.++++++|+|+++ +.|+||++||. .
T Consensus 70 ~~v~~~~~~~~~~~g~iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~-~ 146 (334)
T PRK07109 70 EAVQAAADRAEEELGPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSA-L 146 (334)
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCCh-h
Confidence 9999999999999999999999999876 5788899999999999999999999999999999887 46899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcC--CCeEEEEeeCCcccCcccccCcccchhh-hhhhccCCHHHHHHHHhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQNKQ-MFNIICELPETVARTLVP 247 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~--~gI~v~~i~PG~v~T~~~~~~~~~~~~~-~~~~~~~~pe~~a~~~~~ 247 (347)
+..+.|....|++||+++++|+++|+.|+.. .+|+|++|+||+++|++........... .......+|+++|+.++.
T Consensus 147 ~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~ 226 (334)
T PRK07109 147 AYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILY 226 (334)
T ss_pred hccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHH
Confidence 7778888999999999999999999999974 4799999999999999764322111111 111223589999999998
Q ss_pred hhhhc
Q 019009 248 RIRVV 252 (347)
Q Consensus 248 ~~~~~ 252 (347)
.+..+
T Consensus 227 ~~~~~ 231 (334)
T PRK07109 227 AAEHP 231 (334)
T ss_pred HHhCC
Confidence 88765
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=276.61 Aligned_cols=241 Identities=25% Similarity=0.356 Sum_probs=195.9
Q ss_pred ccCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 9 WSCTCRWFSVVSTR-GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~-GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+..+|+++||||++ |||+++++.|+++|++|++++|+.+++++..+++++.. ...++..+++|+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl 78 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL---------------GLGRVEAVVCDV 78 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc---------------CCceEEEEEccC
Confidence 34579999999984 99999999999999999999999988888877776521 123678899999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++.++++++++++.+.+|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|.|+++...|+||+++|
T Consensus 79 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss 157 (262)
T PRK07831 79 TSEAQVDALIDAAVERLGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNAS 157 (262)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 9999999999999999999999999999866 477889999999999999999999999999999987633689999998
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
. .+..+.+++..|+++|+|+++|+++|+.|++++||+||+|+||+++|++....... . ... +...+..+.
T Consensus 158 ~-~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~--~-~~~------~~~~~~~~~ 227 (262)
T PRK07831 158 V-LGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA--E-LLD------ELAAREAFG 227 (262)
T ss_pred h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH--H-HHH------HHHhcCCCC
Confidence 7 56677788899999999999999999999999999999999999999986432110 0 000 000112345
Q ss_pred hhhhccccccceeeccchHHHHHHhhhh
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAW 275 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 275 (347)
+...|++++..+.||+++...++++..+
T Consensus 228 r~~~p~~va~~~~~l~s~~~~~itG~~i 255 (262)
T PRK07831 228 RAAEPWEVANVIAFLASDYSSYLTGEVV 255 (262)
T ss_pred CCcCHHHHHHHHHHHcCchhcCcCCceE
Confidence 5566777777778888877644444433
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=275.00 Aligned_cols=188 Identities=25% Similarity=0.350 Sum_probs=168.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
||+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+ .+.++.++++|++|++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~ 63 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ-----------------FPGQVLTVQMDVRNPE 63 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCHH
Confidence 58999999999999999999999999999999998888777766654 2356889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+++..|+||++||. .+
T Consensus 64 ~~~~~~~~~~~~~~~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~-~~ 141 (252)
T PRK07677 64 DVQKMVEQIDEKFGRIDALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVAT-YA 141 (252)
T ss_pred HHHHHHHHHHHHhCCccEEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcCh-hh
Confidence 999999999999999999999999765 4678899999999999999999999999999999765446899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~ 218 (347)
..+.++...|++||+|+++|+++|+.|+.+ +||+||+|+||+++|+.
T Consensus 142 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~ 189 (252)
T PRK07677 142 WDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTG 189 (252)
T ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccc
Confidence 667778889999999999999999999974 79999999999999643
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=259.10 Aligned_cols=239 Identities=21% Similarity=0.228 Sum_probs=206.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+..|+++++||+..|||+++++.|++.|++|+.++|+++.+..++++ ....+.++..|++
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--------------------~p~~I~Pi~~Dls 63 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--------------------TPSLIIPIVGDLS 63 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--------------------CCcceeeeEeccc
Confidence 45689999999999999999999999999999999999999888776 3445889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++.+.+.+.. .+++|.||||||+.. ..||.+++.++|++.|++|+.+++.++|...+.+..+..+|.|||+||.
T Consensus 64 ~wea~~~~l~~----v~pidgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSq 138 (245)
T KOG1207|consen 64 AWEALFKLLVP----VFPIDGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQ 138 (245)
T ss_pred HHHHHHHhhcc----cCchhhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecch
Confidence 98888776543 368999999999987 6999999999999999999999999999988888777778899999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+..++..+...||++|+|+++++|+||.|+.++.||||+|.|-.|.|+|-........+ .-....+.++++
T Consensus 139 -as~R~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K--------~k~mL~riPl~r 209 (245)
T KOG1207|consen 139 -ASIRPLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK--------KKKMLDRIPLKR 209 (245)
T ss_pred -hcccccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh--------ccchhhhCchhh
Confidence 68888889999999999999999999999999999999999999999997554322111 112345667888
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
....+++.+++.||.++...+.++..+..+|+|
T Consensus 210 FaEV~eVVnA~lfLLSd~ssmttGstlpveGGf 242 (245)
T KOG1207|consen 210 FAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGGF 242 (245)
T ss_pred hhHHHHHHhhheeeeecCcCcccCceeeecCCc
Confidence 888888999999999999888877777777765
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=280.52 Aligned_cols=215 Identities=20% Similarity=0.292 Sum_probs=176.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++|||||+|||+++|++|+++|++|++++|+++++++..+++++.. .+.++..+.+|+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~---------------~~~~~~~~~~Dl~~- 115 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKY---------------SKTQIKTVVVDFSG- 115 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC---------------CCcEEEEEEEECCC-
Confidence 37999999999999999999999999999999999999999888886632 12467888999985
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 91 ADVQKLSNFAVNEFG--SIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g--~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++.+.++++.+.++ ++|+||||||+..+ ..++.+.+.+++++++++|+.|++.++++++|.|.++ +.|+||++||
T Consensus 116 -~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS 193 (320)
T PLN02780 116 -DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGS 193 (320)
T ss_pred -CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEec
Confidence 23333444444444 46699999998642 2457889999999999999999999999999999887 5789999998
Q ss_pred CCCCCC--CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 168 AGSGGS--STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 168 ~~~~~~--~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
. ++.. +.|+...|++||+|+++|+++|+.|++++||+|++|+||+|+|+|..... ......+||++|+.+
T Consensus 194 ~-a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~-------~~~~~~~p~~~A~~~ 265 (320)
T PLN02780 194 G-AAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR-------SSFLVPSSDGYARAA 265 (320)
T ss_pred h-hhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC-------CCCCCCCHHHHHHHH
Confidence 7 4532 35788999999999999999999999999999999999999999864211 011234899999999
Q ss_pred hhhhhh
Q 019009 246 VPRIRV 251 (347)
Q Consensus 246 ~~~~~~ 251 (347)
++.+..
T Consensus 266 ~~~~~~ 271 (320)
T PLN02780 266 LRWVGY 271 (320)
T ss_pred HHHhCC
Confidence 988853
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=284.16 Aligned_cols=240 Identities=21% Similarity=0.259 Sum_probs=189.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||++|||+++|+.|+++|++|+++.|+.+ ..++..+++++ .+.++.++.+|++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~ 116 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-----------------EGRKAVALPGDLK 116 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-----------------cCCeEEEEecCCC
Confidence 3699999999999999999999999999999887643 34445555544 3456888999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++.+.++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++ +++||++||.
T Consensus 117 ~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~ 193 (300)
T PRK06128 117 DEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSI 193 (300)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCc
Confidence 9999999999999999999999999998643467888999999999999999999999999999963 4799999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
.+..+.+++..|++||+|+++|+++|+.|+.+.||+||+|+||+++|++...... ..+.. .+......+++
T Consensus 194 -~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~-~~~~~-------~~~~~~~p~~r 264 (300)
T PRK06128 194 -QSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ-PPEKI-------PDFGSETPMKR 264 (300)
T ss_pred -cccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC-CHHHH-------HHHhcCCCCCC
Confidence 5777788889999999999999999999999999999999999999998532110 00000 00011223445
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
+..|++++..+.||+++...++++..+..+|
T Consensus 265 ~~~p~dva~~~~~l~s~~~~~~~G~~~~v~g 295 (300)
T PRK06128 265 PGQPVEMAPLYVLLASQESSYVTGEVFGVTG 295 (300)
T ss_pred CcCHHHHHHHHHHHhCccccCccCcEEeeCC
Confidence 5566677777778877655444444444333
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=278.72 Aligned_cols=230 Identities=20% Similarity=0.266 Sum_probs=187.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
||++|||||++|||+++|++|+++|++|++++|+.+.. .++.++.||++|++
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------------------------~~~~~~~~D~~~~~ 57 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------------------------NDVDYFKVDVSNKE 57 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------------------------CceEEEEccCCCHH
Confidence 59999999999999999999999999999999986421 24678999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. ++
T Consensus 58 ~i~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~-~~ 134 (258)
T PRK06398 58 QVIKGIDYVISKYGRIDILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASV-QS 134 (258)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcc-hh
Confidence 999999999999999999999999876 5788899999999999999999999999999999876 47899999987 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH--------HHH
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET--------VAR 243 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~--------~a~ 243 (347)
..+.+++..|++||+|+++|+++++.|+.+. |+||+|+||+++|++.......... ..++. ...
T Consensus 135 ~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 206 (258)
T PRK06398 135 FAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVG-------KDPEHVERKIREWGEM 206 (258)
T ss_pred ccCCCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhcccc-------CChhhhHHHHHhhhhc
Confidence 7778889999999999999999999999875 9999999999999986432110000 01111 111
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.+++++..|++++..+.||+++...++++..+..+|+
T Consensus 207 ~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg 243 (258)
T PRK06398 207 HPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGG 243 (258)
T ss_pred CCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCc
Confidence 2345566677788888888887654444444444443
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-37 Score=277.12 Aligned_cols=189 Identities=21% Similarity=0.251 Sum_probs=166.5
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCC-----------hhHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRS-----------SESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~-----------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 77 (347)
.||+++||||+ +|||+++|++|+++|++|++++|+ .+.+++..+++++ .+
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~g 67 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-----------------NG 67 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh-----------------cC
Confidence 46999999999 499999999999999999998643 2223333344433 35
Q ss_pred ceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC
Q 019009 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP 157 (347)
Q Consensus 78 ~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~ 157 (347)
.++.++++|++|.++++++++++.+.+|++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|.++
T Consensus 68 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 145 (256)
T PRK12859 68 VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK- 145 (256)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-
Confidence 67889999999999999999999999999999999999865 4778899999999999999999999999999999876
Q ss_pred CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 158 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 158 ~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
..|+||++||. ++..+.+++..|++||+++++|+++|+.|+.++||+||+|+||+++|++.
T Consensus 146 ~~g~iv~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~ 206 (256)
T PRK12859 146 SGGRIINMTSG-QFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWM 206 (256)
T ss_pred CCeEEEEEccc-ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCC
Confidence 47899999997 67778888999999999999999999999999999999999999999864
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-36 Score=276.32 Aligned_cols=219 Identities=21% Similarity=0.285 Sum_probs=187.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|+++++++..+++.. +.++..+.+|++|.
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~------------------~~~~~~~~~Dv~d~ 69 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG------------------DDRVLTVVADVTDL 69 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC------------------CCcEEEEEecCCCH
Confidence 369999999999999999999999999999999999988777666521 24567788999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|.++ .|+||++||. +
T Consensus 70 ~~v~~~~~~~~~~~g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~-~ 145 (296)
T PRK05872 70 AAMQAAAEEAVERFGGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSL-A 145 (296)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCH-h
Confidence 9999999999999999999999999976 5788899999999999999999999999999999874 5899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc--chhhhh------hhccCCHHHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMF------NIICELPETVA 242 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~--~~~~~~------~~~~~~pe~~a 242 (347)
+..+.++...|++||+++++|+++|+.|+.++||+|++|+||+++|++....... ...... .....+|+++|
T Consensus 146 ~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va 225 (296)
T PRK05872 146 AFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCA 225 (296)
T ss_pred hcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHH
Confidence 7788889999999999999999999999999999999999999999986543221 000010 11235799999
Q ss_pred HHHhhhhhh
Q 019009 243 RTLVPRIRV 251 (347)
Q Consensus 243 ~~~~~~~~~ 251 (347)
+.++..+..
T Consensus 226 ~~i~~~~~~ 234 (296)
T PRK05872 226 AAFVDGIER 234 (296)
T ss_pred HHHHHHHhc
Confidence 999887764
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=274.17 Aligned_cols=242 Identities=24% Similarity=0.315 Sum_probs=192.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+++|+.|+++|++|++++|+. +..++..++++. .+.++.++.+|++|
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~ 68 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK-----------------AGGEAIAVKGDVTV 68 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCeEEEEEecCCC
Confidence 469999999999999999999999999999998854 455556666654 34568889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++.+.++++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|+|.+++..|+||++||.
T Consensus 69 ~~~i~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~- 146 (261)
T PRK08936 69 ESDVVNLIQTAVKEFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSV- 146 (261)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc-
Confidence 99999999999999999999999999876 4678889999999999999999999999999999876456899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
.+..+.+++..|+++|+|+.+|++.|+.|+.+.||+|++|+||+++|++....... ..... .......+.++
T Consensus 147 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~-------~~~~~~~~~~~ 218 (261)
T PRK08936 147 HEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQRA-------DVESMIPMGYI 218 (261)
T ss_pred cccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHHH-------HHHhcCCCCCC
Confidence 57778888999999999999999999999999999999999999999985432111 00000 00011123445
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
..+++++..+.||+++...+.++..+..++
T Consensus 219 ~~~~~va~~~~~l~s~~~~~~~G~~i~~d~ 248 (261)
T PRK08936 219 GKPEEIAAVAAWLASSEASYVTGITLFADG 248 (261)
T ss_pred cCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence 556666666777777665444444444333
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=276.80 Aligned_cols=242 Identities=22% Similarity=0.216 Sum_probs=192.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++|||+++|||+++++.|+++|++|++++|+++++++..+++.+. .+.++.++.+|++|.+
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D~~~~~ 70 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA----------------HGVDVAVHALDLSSPE 70 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCceEEEEecCCCHH
Confidence 699999999999999999999999999999999999888877777652 2346788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++. ++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.|+||++||. .+
T Consensus 71 ~~~~~~~~----~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss~-~~ 143 (259)
T PRK06125 71 AREQLAAE----AGDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIGA-AG 143 (259)
T ss_pred HHHHHHHH----hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecCc-cc
Confidence 99888754 478999999999875 4788899999999999999999999999999999876 46899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH----HHHHHhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET----VARTLVP 247 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~----~a~~~~~ 247 (347)
..+.+.+..|+++|+|+++|+++++.|+.++||+||+|+||+++|++............. ..++. ..+.+++
T Consensus 144 ~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 219 (259)
T PRK06125 144 ENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAEL----GDESRWQELLAGLPLG 219 (259)
T ss_pred cCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhccc----CCHHHHHHHhccCCcC
Confidence 677778889999999999999999999999999999999999999975322110000000 01111 1122334
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
++..|++++..+.||+++...+.++..+..+|+
T Consensus 220 ~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg 252 (259)
T PRK06125 220 RPATPEEVADLVAFLASPRSGYTSGTVVTVDGG 252 (259)
T ss_pred CCcCHHHHHHHHHHHcCchhccccCceEEecCC
Confidence 555677777777888887765555555555444
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=274.10 Aligned_cols=237 Identities=22% Similarity=0.248 Sum_probs=193.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++..+.+|++|.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-----------------~~~~~~~~~~D~~~~ 71 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG-----------------QGLSAHALAFDVTDH 71 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCceEEEEEccCCCH
Confidence 469999999999999999999999999999999999888777777654 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.++++++|+||||||... ..++.+.+.+++++++++|+.+++.+++++.|.|.++ ..|+||++||. .
T Consensus 72 ~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~-~ 148 (255)
T PRK07523 72 DAVRAAIDAFEAEIGPIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIASV-Q 148 (255)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEEccc-h
Confidence 9999999999999999999999999876 4788889999999999999999999999999999876 47899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+++..|+++|++++.++++++.|++++||+||+|+||+++|++........ ... .......++.+..
T Consensus 149 ~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~--~~~------~~~~~~~~~~~~~ 220 (255)
T PRK07523 149 SALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADP--EFS------AWLEKRTPAGRWG 220 (255)
T ss_pred hccCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCH--HHH------HHHHhcCCCCCCc
Confidence 66778888999999999999999999999999999999999999999854321110 000 0001112234455
Q ss_pred hccccccceeeccchHHHHHHhhhh
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAW 275 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~ 275 (347)
.+++++..+.||+++...++++..+
T Consensus 221 ~~~dva~~~~~l~~~~~~~~~G~~i 245 (255)
T PRK07523 221 KVEELVGACVFLASDASSFVNGHVL 245 (255)
T ss_pred CHHHHHHHHHHHcCchhcCccCcEE
Confidence 5666666677777765544444333
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=273.01 Aligned_cols=240 Identities=21% Similarity=0.267 Sum_probs=186.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.. ++..+.+++ .+.++..+++|+++.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 64 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEA-----------------LGRRFLSLTADLSDI 64 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHh-----------------cCCceEEEECCCCCH
Confidence 4699999999999999999999999999999999753 333344433 235688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|+|.+++..|+||++||. .
T Consensus 65 ~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~ 142 (248)
T TIGR01832 65 EAIKALVDSAVEEFGHIDILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASM-L 142 (248)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecH-H
Confidence 9999999999999999999999999876 3677788999999999999999999999999999876336899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+....|++||++++++++++++|+.++||+||+|+||+++|++.......... . .+...+....+..
T Consensus 143 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~-------~~~~~~~~~~~~~ 214 (248)
T TIGR01832 143 SFQGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDR-N-------AAILERIPAGRWG 214 (248)
T ss_pred hccCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHH-H-------HHHHhcCCCCCCc
Confidence 6666777889999999999999999999999999999999999999975432111000 0 0001111223444
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCC
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
.|++++.++.|++++...+.++..+..+|
T Consensus 215 ~~~dva~~~~~l~s~~~~~~~G~~i~~dg 243 (248)
T TIGR01832 215 TPDDIGGPAVFLASSASDYVNGYTLAVDG 243 (248)
T ss_pred CHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence 55556666667776655444444433333
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=274.25 Aligned_cols=239 Identities=27% Similarity=0.382 Sum_probs=183.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|+.|+++|++|++++|+.+.. .+++.. ..+.++.+|++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~-------------------~~~~~~~~Dl~~~ 63 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE-------------------KGVFTIKCDVGNR 63 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh-------------------CCCeEEEecCCCH
Confidence 469999999999999999999999999999987765432 223322 1367889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++.++|.|+++ +.|+||++||. +
T Consensus 64 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~-~ 140 (255)
T PRK06463 64 DQVKKSKEVVEKEFGRVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASN-A 140 (255)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCH-H
Confidence 9999999999999999999999999865 4678889999999999999999999999999999876 47899999987 3
Q ss_pred CC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch-hhhhhhccCCHHHHHHHHhhh
Q 019009 171 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 171 ~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~-~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+. .+.++...|++||+|+++|+++|+.|+.+.||+||+|+||+++|++......... .... .....+.++++
T Consensus 141 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 214 (255)
T PRK06463 141 GIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLR------ELFRNKTVLKT 214 (255)
T ss_pred hCCCCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHH------HHHHhCCCcCC
Confidence 43 3456778999999999999999999999999999999999999998643211100 0000 00011122344
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
...|++++..+.|++++...++++..+..+++
T Consensus 215 ~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 246 (255)
T PRK06463 215 TGKPEDIANIVLFLASDDARYITGQVIVADGG 246 (255)
T ss_pred CcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 45556666666677776654444444444443
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=297.07 Aligned_cols=243 Identities=22% Similarity=0.287 Sum_probs=201.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++++|||||++|||+++|++|+++|++|++++|+.++++++.++++. .+.++.++.+|++|.+
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~~ 377 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRA-----------------AGAVAHAYRVDVSDAD 377 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCCCHH
Confidence 48999999999999999999999999999999999988888877765 3457889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+++|++|+||||||+.. ..++.+.+.+++++++++|+.|++.++++++|.|++++.+|+||++||. ++
T Consensus 378 ~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~ 455 (582)
T PRK05855 378 AMEAFAEWVRAEHGVPDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASA-AA 455 (582)
T ss_pred HHHHHHHHHHHhcCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh-hh
Confidence 999999999999999999999999976 5778899999999999999999999999999999987546899999998 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc--h----------hhhhhhccCCHH
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--N----------KQMFNIICELPE 239 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~--~----------~~~~~~~~~~pe 239 (347)
..+.++...|++||+|+++|+++|+.|+++.||+|++|+||+|+|+|........ . .........+||
T Consensus 456 ~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 535 (582)
T PRK05855 456 YAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPE 535 (582)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHH
Confidence 8888899999999999999999999999999999999999999999865432100 0 001111234799
Q ss_pred HHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhc
Q 019009 240 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLR 277 (347)
Q Consensus 240 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 277 (347)
++|+.++..+...+. ..++...........+++|
T Consensus 536 ~va~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p 569 (582)
T PRK05855 536 KVAKAIVDAVKRNKA----VVPVTPEAHAGYGVSRFAP 569 (582)
T ss_pred HHHHHHHHHHHcCCC----EEEeCHHHHHHHHHHHHCh
Confidence 999999998875433 3344444444444444444
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=302.38 Aligned_cols=240 Identities=25% Similarity=0.395 Sum_probs=194.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+|++|
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~ 326 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--------------------GDEHLSVQADITD 326 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEccCCC
Confidence 45799999999999999999999999999999999988877665443 2356778999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++++.+++|+||+||||||+.....++.+.+.++|++++++|+.++++++++++|+|. ++|+||++||.
T Consensus 327 ~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~iv~isS~- 402 (520)
T PRK06484 327 EAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS---QGGVIVNLGSI- 402 (520)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc---cCCEEEEECch-
Confidence 99999999999999999999999999864346788899999999999999999999999999993 46899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-HHHHhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLVPR 248 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~~~~~ 248 (347)
++..+.++...|++||+++++|+++|+.|+.++||+||+|+||+|+|++........... .+.. ...++++
T Consensus 403 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--------~~~~~~~~~~~~ 474 (520)
T PRK06484 403 ASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRAD--------FDSIRRRIPLGR 474 (520)
T ss_pred hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHH--------HHHHHhcCCCCC
Confidence 677888899999999999999999999999999999999999999999864321100000 0111 1122344
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+..|++++..+.||+++...++++..+..++++
T Consensus 475 ~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 475 LGDPEEVAEAIAFLASPAASYVNGATLTVDGGW 507 (520)
T ss_pred CcCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 556667777777888776655556555555544
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=265.71 Aligned_cols=215 Identities=20% Similarity=0.246 Sum_probs=183.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.. .+ ++.++.+|++|.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~-~~~~~~~Dl~~~~ 63 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK-----------------AA-RVSVYAADVRDAD 63 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc-----------------CC-eeEEEEcCCCCHH
Confidence 47999999999999999999999999999999998887766555422 22 6889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++++.++++++|++|||||.........+.+.++++.++++|+.|++.+++.++|.|+++ +.++||++||. ++
T Consensus 64 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~-~~ 141 (257)
T PRK07024 64 ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASV-AG 141 (257)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEech-hh
Confidence 99999999999999999999999986522223347889999999999999999999999999877 47899999987 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.+....|++||++++.|+++|+.|+.++||+|++|+||+++|++....... .....+|+++++.++..+..
T Consensus 142 ~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~a~~~~~~l~~ 215 (257)
T PRK07024 142 VRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYP------MPFLMDADRFAARAARAIAR 215 (257)
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCC------CCCccCHHHHHHHHHHHHhC
Confidence 778888999999999999999999999999999999999999999975432110 01124799999999988864
Q ss_pred c
Q 019009 252 V 252 (347)
Q Consensus 252 ~ 252 (347)
.
T Consensus 216 ~ 216 (257)
T PRK07024 216 G 216 (257)
T ss_pred C
Confidence 3
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=273.86 Aligned_cols=191 Identities=23% Similarity=0.361 Sum_probs=174.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+++++++..++++. .+.++.++++|++|.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 71 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE-----------------LGIEAHGYVCDVTDE 71 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcCCCCH
Confidence 359999999999999999999999999999999999888877777654 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.+++.++|+|+++ +.++||++||. .
T Consensus 72 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 148 (265)
T PRK07097 72 DGVQAMVSQIEKEVGVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSM-M 148 (265)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCc-c
Confidence 9999999999999999999999999876 4678899999999999999999999999999999876 57899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.+.+..|+++|+++++|+++|++|+.+.||+|++|+||+++|++...
T Consensus 149 ~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 199 (265)
T PRK07097 149 SELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAP 199 (265)
T ss_pred ccCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhh
Confidence 666778889999999999999999999999999999999999999997643
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=272.56 Aligned_cols=193 Identities=27% Similarity=0.394 Sum_probs=174.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.... .+.++.++.+|+++.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl~~~ 72 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF---------------PEREVHGLAADVSDD 72 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC---------------CCCeEEEEECCCCCH
Confidence 47999999999999999999999999999999999988888777776521 135788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|+++ +.++||++||. +
T Consensus 73 ~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~-~ 149 (257)
T PRK09242 73 EDRRAILDWVEDHWDGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSV-S 149 (257)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECcc-c
Confidence 9999999999999999999999999865 4677889999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.+....|+++|++++.|+++|+.|+.+.||+|++|+||+++|++...
T Consensus 150 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~ 200 (257)
T PRK09242 150 GLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG 200 (257)
T ss_pred cCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccc
Confidence 677778889999999999999999999999999999999999999998643
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=279.84 Aligned_cols=188 Identities=16% Similarity=0.173 Sum_probs=160.3
Q ss_pred EEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 16 FSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 16 lITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
|||||++|||+++|++|+++| ++|++++|+.++++++.+++.. .+.++.++.+|++|.++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~d~~~v~ 63 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-----------------PKDSYTVMHLDLASLDSVR 63 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-----------------CCCeEEEEEecCCCHHHHH
Confidence 699999999999999999999 9999999999888777666632 2346788999999999999
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-CcEEEEEcCCCCCCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAGSGGS 173 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~g~Iv~vsS~~~~~~ 173 (347)
++++++.+.++++|+||||||+..+..++.+.+.++|++++++|+.|++.++++++|.|++++. +|+||++||.. +..
T Consensus 64 ~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~-~~~ 142 (308)
T PLN00015 64 QFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSIT-GNT 142 (308)
T ss_pred HHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccc-ccc
Confidence 9999999888999999999998643345678899999999999999999999999999987621 58999999973 321
Q ss_pred -----------------------------------CCCCcchhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcc-cC
Q 019009 174 -----------------------------------STPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMV-LT 216 (347)
Q Consensus 174 -----------------------------------~~~~~~~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v-~T 216 (347)
..+++.+|++||+|+..+++.|++|+.+ .||+|++|+||+| .|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 222 (308)
T PLN00015 143 NTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATT 222 (308)
T ss_pred ccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCc
Confidence 0124567999999999999999999975 6999999999999 78
Q ss_pred ccccc
Q 019009 217 DLLLS 221 (347)
Q Consensus 217 ~~~~~ 221 (347)
+|...
T Consensus 223 ~~~~~ 227 (308)
T PLN00015 223 GLFRE 227 (308)
T ss_pred ccccc
Confidence 88643
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=275.22 Aligned_cols=194 Identities=26% Similarity=0.313 Sum_probs=169.3
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.+..+++++||||++|||+++|++|+.+|++|++++||.++.++++++|.... ...++.++.||+
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~---------------~~~~i~~~~lDL 95 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGK---------------ANQKIRVIQLDL 95 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCceEEEECCC
Confidence 34567999999999999999999999999999999999999999999998732 346788999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.++|+++++++.+.++++|+||||||+.. +....+.|++|.+|.+|++|+|.+++.++|.|+++. .+|||++||
T Consensus 96 ssl~SV~~fa~~~~~~~~~ldvLInNAGV~~---~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS 171 (314)
T KOG1208|consen 96 SSLKSVRKFAEEFKKKEGPLDVLINNAGVMA---PPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSS 171 (314)
T ss_pred CCHHHHHHHHHHHHhcCCCccEEEeCccccc---CCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcC
Confidence 9999999999999999999999999999965 233788899999999999999999999999999874 599999999
Q ss_pred CCCCCC----------C--CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 168 AGSGGS----------S--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 168 ~~~~~~----------~--~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
..+... . +....+|+.||.++..+++.|++++.+ ||.+++++||.|.|+...+
T Consensus 172 ~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 172 ILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred ccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec
Confidence 743110 0 223346999999999999999999988 9999999999999995444
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=276.05 Aligned_cols=191 Identities=24% Similarity=0.261 Sum_probs=165.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+.++.++.+|++|.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~---------------~~~~v~~~~~Dl~d~ 77 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV---------------PDAKLSLRALDLSSL 77 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---------------CCCceEEEEecCCCH
Confidence 46999999999999999999999999999999999999988888886532 124688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++++||+||||||+.. .+..+.+.++++.++++|++|++.+++.++|.|++. .++||++||..
T Consensus 78 ~sv~~~~~~~~~~~~~iD~li~nAG~~~--~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~- 152 (313)
T PRK05854 78 ASVAALGEQLRAEGRPIHLLINNAGVMT--PPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIA- 152 (313)
T ss_pred HHHHHHHHHHHHhCCCccEEEECCcccc--CCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechh-
Confidence 9999999999999999999999999864 234467889999999999999999999999999864 57999999873
Q ss_pred CCC------------CCCCcchhhhHHHHHHHHHHHHHhHh--cCCCeEEEEeeCCcccCccccc
Q 019009 171 GGS------------STPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~------------~~~~~~~Y~asKaal~~~~~~La~el--~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+.. +++.+..|+.||+|+..|++.|++++ .+.||+||+|+||+|+|++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~ 217 (313)
T PRK05854 153 ARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA 217 (313)
T ss_pred hcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence 322 23456789999999999999999865 4578999999999999998643
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=276.23 Aligned_cols=248 Identities=21% Similarity=0.256 Sum_probs=190.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.+..++..+++. .+.++.++++|++|.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~d~ 78 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG------------------GEPNVCFFHCDVTVE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc------------------CCCceEEEEeecCCH
Confidence 46999999999999999999999999999999999877666555442 124688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++.+.++++++|+||||||.... ..++.+.+.+++++++++|+.+++.++++++|.|.++ +.|+||+++|.
T Consensus 79 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ii~isS~- 156 (280)
T PLN02253 79 DDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-KKGSIVSLCSV- 156 (280)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCceEEEecCh-
Confidence 99999999999999999999999998642 2457788999999999999999999999999999876 46899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch--hhhhhhccCCHHHHH-HH-H
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN--KQMFNIICELPETVA-RT-L 245 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~--~~~~~~~~~~pe~~a-~~-~ 245 (347)
++..+.++...|++||+|+++++++|+.|+.+.||+||+|+||+++|++......... ....... ..... .. +
T Consensus 157 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 233 (280)
T PLN02253 157 ASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGF---RAFAGKNANL 233 (280)
T ss_pred hhcccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhh---HHHhhcCCCC
Confidence 5666667778999999999999999999999999999999999999997532211100 0000000 00000 00 0
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..+...+++++..+.|++++...++++..+..+|++
T Consensus 234 ~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~ 269 (280)
T PLN02253 234 KGVELTVDDVANAVLFLASDEARYISGLNLMIDGGF 269 (280)
T ss_pred cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCch
Confidence 122244666677777888776555555554444443
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=269.87 Aligned_cols=239 Identities=21% Similarity=0.309 Sum_probs=191.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++++.|+++|++|++++|+.+++++..++++. .+.++.++.+|++|.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 72 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQAFACRCDITSE 72 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCH
Confidence 469999999999999999999999999999999999888877777654 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+.++++|++|||||...+ .++ +.+.+++++.+++|+.+++.++++++|+|.+. +.++||++||. +
T Consensus 73 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~-~ 148 (255)
T PRK06113 73 QELSALADFALSKLGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSM-A 148 (255)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCcEEEEEecc-c
Confidence 99999999999999999999999998652 444 68899999999999999999999999999865 46799999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+++..|+++|+|+++|++++++|+.+.||+||+|+||+++|++.......... .+......+.+..
T Consensus 149 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~---------~~~~~~~~~~~~~ 219 (255)
T PRK06113 149 AENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIE---------QKMLQHTPIRRLG 219 (255)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHH---------HHHHhcCCCCCCc
Confidence 7778888899999999999999999999999999999999999999986432111000 0001111233444
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCC
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
.|++++..+.|++++...++++..+..+|
T Consensus 220 ~~~d~a~~~~~l~~~~~~~~~G~~i~~~g 248 (255)
T PRK06113 220 QPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_pred CHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 55666666677777665444444444444
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=268.73 Aligned_cols=214 Identities=25% Similarity=0.317 Sum_probs=187.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++||||||+|||++++++|+++|++|++++|+++++++..+++. ++.++.+|++|.+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---------------------~~~~~~~D~~~~~ 63 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG---------------------LVVGGPLDVTDPA 63 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------------------cceEEEccCCCHH
Confidence 5899999999999999999999999999999999988766554431 3667899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++.+.+.++++|++|||||+.. ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.|+||++||. ++
T Consensus 64 ~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~ 140 (273)
T PRK07825 64 SFAAFLDAVEADLGPIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVASL-AG 140 (273)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcCc-cc
Confidence 999999999999999999999999976 5778889999999999999999999999999999887 47899999998 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|++||+++++|+++|+.|+.+.||+|++|+||++.|++....... ......+|+++|+.++..+..
T Consensus 141 ~~~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~va~~~~~~l~~ 215 (273)
T PRK07825 141 KIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA-----KGFKNVEPEDVAAAIVGTVAK 215 (273)
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc-----cCCCCCCHHHHHHHHHHHHhC
Confidence 778889999999999999999999999999999999999999999986543211 112345899999999988875
Q ss_pred ccc
Q 019009 252 VKG 254 (347)
Q Consensus 252 ~~~ 254 (347)
++.
T Consensus 216 ~~~ 218 (273)
T PRK07825 216 PRP 218 (273)
T ss_pred CCC
Confidence 543
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=271.50 Aligned_cols=190 Identities=23% Similarity=0.320 Sum_probs=170.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||+++|++|+++|++|+++.| +.+.++...++++. .+.++..+.+|+++.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 64 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-----------------HGVRAEIRQLDLSDL 64 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------cCCceEEEEccCCCH
Confidence 589999999999999999999999999998865 55666666666654 346788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++++|.+++++|+||++||. .
T Consensus 65 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~-~ 142 (256)
T PRK12743 65 PEGAQALDKLIQRLGRIDVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSV-H 142 (256)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeec-c
Confidence 9999999999999999999999999876 4667888999999999999999999999999999876456899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|+++|+++++++++|+.|+.++||+|++|+||+++|++..
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~ 192 (256)
T PRK12743 143 EHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG 192 (256)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccc
Confidence 77788888999999999999999999999999999999999999999754
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=282.53 Aligned_cols=259 Identities=17% Similarity=0.134 Sum_probs=176.8
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhh-hhcCCCCcc-------cccCcee
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGM-MAAGGSSKK-------NLVHAKV 80 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~-~~~~~~~~~-------~~~~~~~ 80 (347)
.||+++||||+ +|||+++|+.|+++|++|++.+|.+ +++...+..+....... ....+.... ...-...
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence 47999999995 9999999999999999999987652 22222111111000000 000000000 0000011
Q ss_pred eEEecCCCC--------HHHHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH
Q 019009 81 AGIACDVCE--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMR 151 (347)
Q Consensus 81 ~~~~~Dls~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp 151 (347)
.-+.+|+.+ .++++++++++.++||++|+||||||+.. ...++.+.+.++|++++++|+.|+++++++++|
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 112222222 24699999999999999999999999753 246788999999999999999999999999999
Q ss_pred HhHcCCCCcEEEEEcCCCCCCCCCCCcc-hhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcccccCcccchhh
Q 019009 152 VMRDQPKGGHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNKQ 229 (347)
Q Consensus 152 ~l~~~~~~g~Iv~vsS~~~~~~~~~~~~-~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~~~~~~~~~~~~ 229 (347)
+|++ +|+||+++|. ++..+.|++. .|++||+|+++|+++|+.|+++ +|||||+|+||+++|++....... ..
T Consensus 166 ~m~~---~G~ii~iss~-~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~--~~ 239 (299)
T PRK06300 166 IMNP---GGSTISLTYL-ASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI--ER 239 (299)
T ss_pred Hhhc---CCeEEEEeeh-hhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc--HH
Confidence 9974 4789999987 5666777765 8999999999999999999987 599999999999999985321100 00
Q ss_pred hhhhccCCHHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 230 MFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 230 ~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.. .......++.+...|++++..+.||+++...+.++..+..+|++.
T Consensus 240 ~~------~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~ 286 (299)
T PRK06300 240 MV------DYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGAN 286 (299)
T ss_pred HH------HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 00 000111223455566677777778888876666666555555543
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=271.37 Aligned_cols=218 Identities=22% Similarity=0.290 Sum_probs=184.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~-----------------~~~~~~~~~~Dl~d~ 101 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR-----------------AGGDAMAVPCDLSDL 101 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCH
Confidence 459999999999999999999999999999999999988887777754 345678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF--TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~--~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++.++++.+.++++++|++|||||+.. ..++.+. +.++++.++++|+.|++.++++++|.|+++ +.++||++||.
T Consensus 102 ~~v~~~~~~~~~~~g~id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~ 179 (293)
T PRK05866 102 DAVDALVADVEKRIGGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATW 179 (293)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECCh
Confidence 9999999999999999999999999876 3455443 468899999999999999999999999876 46899999986
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+....+.|+...|++||+|+++|+++|+.|+.++||+|++|+||+++|++....... ......+||++|+.++..
T Consensus 180 ~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-----~~~~~~~pe~vA~~~~~~ 254 (293)
T PRK05866 180 GVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-----DGLPALTADEAAEWMVTA 254 (293)
T ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-----cCCCCCCHHHHHHHHHHH
Confidence 322224677889999999999999999999999999999999999999987532211 112235899999999988
Q ss_pred hhhc
Q 019009 249 IRVV 252 (347)
Q Consensus 249 ~~~~ 252 (347)
+...
T Consensus 255 ~~~~ 258 (293)
T PRK05866 255 ARTR 258 (293)
T ss_pred HhcC
Confidence 8753
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=271.89 Aligned_cols=238 Identities=25% Similarity=0.294 Sum_probs=183.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|++. .++..+++.. .+.++.++.+|++|.+
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~ 69 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRA-----------------AGGEALALTADLETYA 69 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHh-----------------cCCeEEEEEEeCCCHH
Confidence 599999999999999999999999999999999853 4445555543 3456888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++++.++++++|+||||||......++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||. ++
T Consensus 70 ~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~-~~ 147 (260)
T PRK12823 70 GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSI-AT 147 (260)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcCc-cc
Confidence 99999999999999999999999975324678889999999999999999999999999999876 46899999987 33
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc--chhhhhhhccCCHHHH----HHHH
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMFNIICELPETV----ARTL 245 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~--~~~~~~~~~~~~pe~~----a~~~ 245 (347)
. .+....|++||+|++.|+++|+.|++++||+||+|+||+|.|++....... ..... ....++.. ...+
T Consensus 148 ~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 222 (260)
T PRK12823 148 R--GINRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQE---KAWYQQIVDQTLDSSL 222 (260)
T ss_pred c--CCCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccc---cccHHHHHHHHhccCC
Confidence 2 234568999999999999999999999999999999999999863210000 00000 00001111 1123
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhh
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTA 274 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 274 (347)
+++...|++++..+.||+++...++++..
T Consensus 223 ~~~~~~~~dva~~~~~l~s~~~~~~~g~~ 251 (260)
T PRK12823 223 MKRYGTIDEQVAAILFLASDEASYITGTV 251 (260)
T ss_pred cccCCCHHHHHHHHHHHcCcccccccCcE
Confidence 44555677777777788876544333333
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=274.41 Aligned_cols=232 Identities=19% Similarity=0.223 Sum_probs=182.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++|||+ +|||+++|+.|+ +|++|++++|+.+++++..++++. .+.++.++++|++|.+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d~~ 62 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLRE-----------------AGFDVSTQEVDVSSRE 62 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEeecCCHH
Confidence 589999998 699999999996 899999999998888777777654 3457888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++++ ++++++|+||||||+.. +.+++++++++|+.++++++++++|+|++ +|++|+++|. ++
T Consensus 63 ~i~~~~~~~-~~~g~id~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~-~~ 129 (275)
T PRK06940 63 SVKALAATA-QTLGPVTGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQ-SG 129 (275)
T ss_pred HHHHHHHHH-HhcCCCCEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEec-cc
Confidence 999999988 56899999999999742 13679999999999999999999999964 3678888887 34
Q ss_pred CCCC------------------------------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 172 GSST------------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 172 ~~~~------------------------------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
.... +++..|++||+|+++++++|+.|+.++||+||+|+||+++|++...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~ 209 (275)
T PRK06940 130 HRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD 209 (275)
T ss_pred ccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence 3321 2467899999999999999999999999999999999999998633
Q ss_pred CcccchhhhhhhccCCHHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 222 GSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 222 ~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.......... .+.....+++++..|++++..+.||+++...++++..+..+|++
T Consensus 210 ~~~~~~~~~~------~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 210 ELNGPRGDGY------RNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred hhcCCchHHH------HHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 2111000000 01112234566777888888888999988767777666666654
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=267.73 Aligned_cols=217 Identities=21% Similarity=0.244 Sum_probs=182.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+++++++. .+ ..+.++.+|++|.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~-------------------~~~~~~~~Dl~d~ 59 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EA-------------------EGLEAFQLDYAEP 59 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HH-------------------CCceEEEccCCCH
Confidence 468999999999999999999999999999999998766432 22 1366789999999
Q ss_pred HHHHHHHHHHHhhc-CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++.+.+.+ +++|+||||||+.. ..++.+.+.++++.++++|+.|++.+++.++|.|+++ +.++||++||.
T Consensus 60 ~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~- 136 (277)
T PRK05993 60 ESIAALVAQVLELSGGRLDALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSI- 136 (277)
T ss_pred HHHHHHHHHHHHHcCCCccEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECCh-
Confidence 99999999997766 68999999999876 4778889999999999999999999999999999887 47899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc-----------hh----h---h-
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ-----------NK----Q---M- 230 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~-----------~~----~---~- 230 (347)
.+..+.+....|++||+++++|+++|+.|+.+.||+|++|+||+++|++........ .. . .
T Consensus 137 ~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (277)
T PRK05993 137 LGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLE 216 (277)
T ss_pred hhcCCCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHH
Confidence 677788888999999999999999999999999999999999999999865321100 00 0 0
Q ss_pred ----hhhccCCHHHHHHHHhhhhhhcc
Q 019009 231 ----FNIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 231 ----~~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
......+||++|+.++..+...+
T Consensus 217 ~~~~~~~~~~~~~~va~~i~~a~~~~~ 243 (277)
T PRK05993 217 GGGSKSRFKLGPEAVYAVLLHALTAPR 243 (277)
T ss_pred hhhhccccCCCHHHHHHHHHHHHcCCC
Confidence 01123579999999998887543
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=268.12 Aligned_cols=237 Identities=22% Similarity=0.259 Sum_probs=188.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
||++|||||++|||++++++|+++|++|++++|+++.. ...++.++.+|++|.+
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~~~~~ 62 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--------------------------LPEGVEFVAADLTTAE 62 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--------------------------cCCceeEEecCCCCHH
Confidence 69999999999999999999999999999999986531 1235778999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++++++++.++++++|++|||||... ...++.+.+.+++++++++|+.+++.++++++|+|+++ +.++||++||. .
T Consensus 63 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~-~ 140 (260)
T PRK06523 63 GCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVTSI-Q 140 (260)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEecc-c
Confidence 999999999999999999999999753 23567788999999999999999999999999999876 46899999987 4
Q ss_pred CCCCCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH-----
Q 019009 171 GGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART----- 244 (347)
Q Consensus 171 ~~~~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~----- 244 (347)
+..+.+ ....|+++|+++++|+++++.|+.+.||+||+|+||+|+|++....... .......++++..+.
T Consensus 141 ~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 216 (260)
T PRK06523 141 RRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAER----LAEAAGTDYEGAKQIIMDSL 216 (260)
T ss_pred ccCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHH----HHhhcCCCHHHHHHHHHHHh
Confidence 555544 7889999999999999999999999999999999999999975321110 000111123333222
Q ss_pred ---HhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 245 ---LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 245 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
++++...+++++..+.||+++...++++..+..+|+
T Consensus 217 ~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg 255 (260)
T PRK06523 217 GGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGG 255 (260)
T ss_pred ccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCC
Confidence 344556677888888898887765555555555443
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=271.12 Aligned_cols=267 Identities=14% Similarity=0.084 Sum_probs=191.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||+++|++|+++| ++|++++|+.++++++.+++.. .+.++.++.+|++|.
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~ 65 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-----------------PKDSYTIMHLDLGSL 65 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-----------------CCCeEEEEEcCCCCH
Confidence 6899999999999999999999999 9999999999888777666532 234677889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~Iv~vsS~~ 169 (347)
++++++++++.+.++++|+||||||+..+..+..+.+.++|++++++|+.+++.++++++|+|++++ +.++||++||..
T Consensus 66 ~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~ 145 (314)
T TIGR01289 66 DSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSIT 145 (314)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCc
Confidence 9999999999888899999999999854323445678999999999999999999999999998763 248999999973
Q ss_pred CCC--------------------------------CCCCCcchhhhHHHHHHHHHHHHHhHhc-CCCeEEEEeeCCcc-c
Q 019009 170 SGG--------------------------------SSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMV-L 215 (347)
Q Consensus 170 ~~~--------------------------------~~~~~~~~Y~asKaal~~~~~~La~el~-~~gI~v~~i~PG~v-~ 215 (347)
+.. ....++..|++||+|+..+++.|++++. +.||+|++|+||+| .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 225 (314)
T TIGR01289 146 GNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD 225 (314)
T ss_pred cccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence 210 0112456799999999999999999985 46899999999999 6
Q ss_pred CcccccCcccch---hhhhh---hccCCHHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcccccCCccc
Q 019009 216 TDLLLSGSTIQN---KQMFN---IICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRAL 289 (347)
Q Consensus 216 T~~~~~~~~~~~---~~~~~---~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
|++......... ..+.. ....+|++.++.++..+..+... ....|+...... . ...........
T Consensus 226 T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~-~~g~~~~~~~~~--------~-~~~~~~~~~~~ 295 (314)
T TIGR01289 226 TGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLK-KSGVYWSWGNRQ--------E-SFVNQLSEEVS 295 (314)
T ss_pred CcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccC-CCceeeecCCcc--------c-ccccCCChhhc
Confidence 998643221100 00000 01246777777766554433211 111222211100 0 00001112234
Q ss_pred cccchhhhhhhccccc
Q 019009 290 YAAEADRIRNWAENRA 305 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~ 305 (347)
+.....++|+|+++..
T Consensus 296 ~~~~~~~lw~~~~~~~ 311 (314)
T TIGR01289 296 DDSKASKMWDLSEKLV 311 (314)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 5667888999988754
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=271.99 Aligned_cols=186 Identities=21% Similarity=0.238 Sum_probs=161.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++. .+.++.+|++|.
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~---------------------~v~~~~~Dl~d~ 83 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID---------------------GVEVVMLDLADL 83 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---------------------hCeEEEccCCCH
Confidence 46999999999999999999999999999999999888776665542 266789999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.++++|+||||||+.. +..+.+.++++..+++|+.+++.++++++|.|+++ +.++||++||.+.
T Consensus 84 ~~v~~~~~~~~~~~~~iD~li~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~ 159 (315)
T PRK06196 84 ESVRAFAERFLDSGRRIDILINNAGVMA---CPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGH 159 (315)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCCC---CCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHh
Confidence 9999999999999999999999999853 22456678899999999999999999999999876 4689999998632
Q ss_pred CC-----------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~-----------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
.. .+.+.+..|++||++++.|++.|+.++.+.||+|++|+||++.|++...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~ 221 (315)
T PRK06196 160 RRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRH 221 (315)
T ss_pred ccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcccc
Confidence 11 2334567899999999999999999999999999999999999998643
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-36 Score=270.44 Aligned_cols=240 Identities=22% Similarity=0.323 Sum_probs=192.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|+.|+++|++|++++|+.+++++..+++ ..++.++.+|++|.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 64 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI--------------------GPAAIAVSLDVTRQ 64 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEccCCCH
Confidence 3689999999999999999999999999999999988776655443 13577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.++++++|+||||||... ..++.+.+.++++.++++|+.+++.++++++|.|.+++.+++||++||. .
T Consensus 65 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~-~ 142 (257)
T PRK07067 65 DSIDRIVAAAVERFGGIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQ-A 142 (257)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCH-H
Confidence 9999999999999999999999999875 4778889999999999999999999999999999876446899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH-----HHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-----RTL 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-----~~~ 245 (347)
+..+.++...|++||++++.|+++++.|+.++||+||+|+||+++|++......... ......+.+.. ..+
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 218 (257)
T PRK07067 143 GRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFA----RYENRPPGEKKRLVGEAVP 218 (257)
T ss_pred hCCCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhh----hccCCCHHHHHHHHhhcCC
Confidence 667788889999999999999999999999999999999999999997543211000 00000111111 123
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhh
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWL 276 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 276 (347)
++++..+++++..+.|++++.....++..+.
T Consensus 219 ~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~ 249 (257)
T PRK07067 219 LGRMGVPDDLTGMALFLASADADYIVAQTYN 249 (257)
T ss_pred CCCccCHHHHHHHHHHHhCcccccccCcEEe
Confidence 4556677788888888888765444444333
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=269.26 Aligned_cols=240 Identities=21% Similarity=0.232 Sum_probs=192.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++++.|+++|++|++++|++++++ ..++.++.+|++|.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~~~~~D~~~~ 61 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------------------HENYQFVPTDVSSA 61 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------------------cCceEEEEccCCCH
Confidence 4699999999999999999999999999999999876431 13577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCC--------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEE
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGF--------KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 162 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~--------~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~I 162 (347)
++++++++.+.++++++|++|||||...+. .++.+.+.++|++++++|+.+++.++++++|+|+++ +.++|
T Consensus 62 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~i 140 (266)
T PRK06171 62 EEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-HDGVI 140 (266)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-CCcEE
Confidence 999999999999999999999999975421 123467899999999999999999999999999876 46899
Q ss_pred EEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCccc-CcccccCcccchhhhhhhccCCHHHH
Q 019009 163 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 163 v~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~-T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
|++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+++ |++....... .........+++.
T Consensus 141 v~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~---~~~~~~~~~~~~~ 216 (266)
T PRK06171 141 VNMSSE-AGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEE---ALAYTRGITVEQL 216 (266)
T ss_pred EEEccc-cccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhh---hhccccCCCHHHH
Confidence 999987 6777788889999999999999999999999999999999999997 6653211100 0000000111211
Q ss_pred H-------HHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 242 A-------RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 242 a-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
. ..++++...|++++.++.||+++...++++..+..+|++
T Consensus 217 ~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~ 263 (266)
T PRK06171 217 RAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK 263 (266)
T ss_pred HhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence 1 234567788899999999999988777777776666554
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=266.66 Aligned_cols=191 Identities=26% Similarity=0.362 Sum_probs=174.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|+++||||++|||++++++|+++|++|++++|+++.+++..+++++ .+.++.++.+|+++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~ 71 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA-----------------AGGAAEALAFDIAD 71 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEccCCC
Confidence 4579999999999999999999999999999999999888877777755 34568899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++++.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.++ +.++||++||.
T Consensus 72 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~ss~- 148 (256)
T PRK06124 72 EEAVAAAFARIDAEHGRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRIIAITSI- 148 (256)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEeec-
Confidence 99999999999999999999999999876 4778889999999999999999999999999999876 47899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.+..+.++...|+++|++++++++.++.|+.+.||+|++|+||+++|++..
T Consensus 149 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~ 199 (256)
T PRK06124 149 AGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNA 199 (256)
T ss_pred hhccCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchh
Confidence 577778889999999999999999999999989999999999999999743
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=260.75 Aligned_cols=220 Identities=23% Similarity=0.315 Sum_probs=190.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+++||||++|||++++++|+++|++|++++|+.+++++..++++. .+.++.++.+|++|.++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~~~ 63 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE-----------------AGGDGFYQRCDVRDYSQ 63 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEccCCCHHH
Confidence 5799999999999999999999999999999999988888877765 34578889999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++.+.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. ++.
T Consensus 64 ~~~~~~~i~~~~~~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~-~~~ 140 (270)
T PRK05650 64 LTALAQACEEKWGGIDVIVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASM-AGL 140 (270)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECCh-hhc
Confidence 99999999999999999999999876 4678889999999999999999999999999999876 46899999987 677
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch---hh---hhhhccCCHHHHHHHHh
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN---KQ---MFNIICELPETVARTLV 246 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~---~~---~~~~~~~~pe~~a~~~~ 246 (347)
.+.++...|+++|+++++|+++|+.|+.+.||+|++|+||+++|++......... .. .......+++++|+.++
T Consensus 141 ~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~ 220 (270)
T PRK05650 141 MQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIY 220 (270)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 7888899999999999999999999999999999999999999998654321111 11 11122358999999999
Q ss_pred hhhhhc
Q 019009 247 PRIRVV 252 (347)
Q Consensus 247 ~~~~~~ 252 (347)
..+...
T Consensus 221 ~~l~~~ 226 (270)
T PRK05650 221 QQVAKG 226 (270)
T ss_pred HHHhCC
Confidence 888743
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=260.51 Aligned_cols=217 Identities=23% Similarity=0.215 Sum_probs=180.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|+++||||++|||+++|++|+++| ++|++++|++++ +++..++++.. .+.++.++.+|++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~----------------~~~~v~~~~~D~~ 70 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA----------------GASSVEVIDFDAL 70 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc----------------CCCceEEEEecCC
Confidence 46899999999999999999999995 899999999886 77777777652 1236889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++.+ ++++|++|||+|+..+ ......+.++..+++++|+.+++.+++.++|.|+++ +.++||++||.
T Consensus 71 ~~~~~~~~~~~~~~-~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~ 147 (253)
T PRK07904 71 DTDSHPKVIDAAFA-GGDVDVAIVAFGLLGD-AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSV 147 (253)
T ss_pred ChHHHHHHHHHHHh-cCCCCEEEEeeecCCc-hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEech
Confidence 99999999999886 5899999999998642 111122455667899999999999999999999987 47899999997
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++..+.++...|++||+|+.+|+++|+.|+.++||+|++|+||+++|++...... .....+|+++|+.++..
T Consensus 148 -~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~A~~i~~~ 219 (253)
T PRK07904 148 -AGERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-------APLTVDKEDVAKLAVTA 219 (253)
T ss_pred -hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-------CCCCCCHHHHHHHHHHH
Confidence 4556677778999999999999999999999999999999999999998754321 11235899999999988
Q ss_pred hhhccc
Q 019009 249 IRVVKG 254 (347)
Q Consensus 249 ~~~~~~ 254 (347)
+...+.
T Consensus 220 ~~~~~~ 225 (253)
T PRK07904 220 VAKGKE 225 (253)
T ss_pred HHcCCC
Confidence 875433
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=269.91 Aligned_cols=189 Identities=26% Similarity=0.336 Sum_probs=167.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+++|++|+++|++|++.+|+ .++.++..++++. .+.++.++.+|++|
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~-----------------~g~~~~~~~~Dv~d 73 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA-----------------AGAKAVAVAGDISQ 73 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh-----------------cCCeEEEEeCCCCC
Confidence 46999999999999999999999999999999885 4466667777755 35678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC------CCcEEE
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP------KGGHIF 163 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~------~~g~Iv 163 (347)
.++++++++.+.+ +|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++. ..|+||
T Consensus 74 ~~~~~~~~~~~~~-~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv 151 (306)
T PRK07792 74 RATADELVATAVG-LGGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIV 151 (306)
T ss_pred HHHHHHHHHHHHH-hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEE
Confidence 9999999999988 999999999999876 36678899999999999999999999999999997531 137999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++||. ++..+.++...|+++|+|+++|+++|+.|+.++||+||+|+|| +.|+|..
T Consensus 152 ~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~ 206 (306)
T PRK07792 152 NTSSE-AGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTA 206 (306)
T ss_pred EECCc-ccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhh
Confidence 99987 5677778889999999999999999999999999999999999 4888753
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=262.52 Aligned_cols=191 Identities=21% Similarity=0.273 Sum_probs=164.6
Q ss_pred eEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 14 RWFSVVSTRGLGKALAREFLL----SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~----~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+++||||++|||+++|++|++ .|++|++++|+++++++..++++... .+.++.++.+|++|
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~v~~~~~Dl~~ 66 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER---------------SGLRVVRVSLDLGA 66 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC---------------CCceEEEEEeccCC
Confidence 689999999999999999997 79999999999999888888876421 13468889999999
Q ss_pred HHHHHHHHHHHHhhcCCc----cEEEEcCCCCCCCC-CCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEE
Q 019009 90 PADVQKLSNFAVNEFGSI----DIWINNAGTNKGFK-PLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHI 162 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~i----D~li~nAG~~~~~~-~~~~-~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~I 162 (347)
.++++++++.+.+.++.+ |+||||||...... ...+ .+.+++++++++|+.+++.+++.++|.|+++. ..++|
T Consensus 67 ~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~i 146 (256)
T TIGR01500 67 EAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTV 146 (256)
T ss_pred HHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEE
Confidence 999999999998877653 69999999754222 2333 35789999999999999999999999998652 25799
Q ss_pred EEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 163 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 163 v~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
|++||. ++..+.+++..|++||+|+++|+++|+.|+++.||+||+|+||+|+|+|..
T Consensus 147 v~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~ 203 (256)
T TIGR01500 147 VNISSL-CAIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQ 203 (256)
T ss_pred EEECCH-HhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHH
Confidence 999997 577788889999999999999999999999999999999999999999864
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=266.10 Aligned_cols=190 Identities=23% Similarity=0.328 Sum_probs=171.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++.. .+.++.++.+|++|.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 66 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD-----------------LGRRALAVPTDITDE 66 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCceEEEecCCCCH
Confidence 469999999999999999999999999999999999888777777654 345688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|++|||||...+..++.+.+.+++++++++|+.+++.++++++|.|+++ +++||++||. .
T Consensus 67 ~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~-~ 143 (258)
T PRK07890 67 DQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSM-V 143 (258)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEech-h
Confidence 999999999999999999999999986534677888999999999999999999999999999865 4799999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
...+.+++..|+++|++++.++++++.|++++||+|++|+||++.|++..
T Consensus 144 ~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 193 (258)
T PRK07890 144 LRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLK 193 (258)
T ss_pred hccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHH
Confidence 67778888999999999999999999999999999999999999998753
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=260.27 Aligned_cols=221 Identities=24% Similarity=0.357 Sum_probs=186.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+++||||++|||++++++|+++|++|++++|+.+++++..+++... ......++.+|++|+++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~~~ 64 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL----------------GGTVPEHRALDISDYDA 64 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------CCCcceEEEeeCCCHHH
Confidence 57999999999999999999999999999999998887777776542 11234567899999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++++.+.++++|+||||||... ..++.+.+.++++..+++|+.+++.++++++|.|.+++.+++||++||. .+.
T Consensus 65 ~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~-~~~ 142 (272)
T PRK07832 65 VAAFAADIHAAHGSMDVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA-AGL 142 (272)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccc-ccc
Confidence 99999999999999999999999875 4678889999999999999999999999999999875446899999987 566
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc----chh---hh---hhhccCCHHHHH
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI----QNK---QM---FNIICELPETVA 242 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~----~~~---~~---~~~~~~~pe~~a 242 (347)
.+.++...|+++|+++.+|+++++.|+.+.||+|++|+||+++|++....... ..+ .. ......+|+++|
T Consensus 143 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA 222 (272)
T PRK07832 143 VALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAA 222 (272)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHH
Confidence 77888899999999999999999999999999999999999999986542110 000 00 111235899999
Q ss_pred HHHhhhhhh
Q 019009 243 RTLVPRIRV 251 (347)
Q Consensus 243 ~~~~~~~~~ 251 (347)
+.++..+..
T Consensus 223 ~~~~~~~~~ 231 (272)
T PRK07832 223 EKILAGVEK 231 (272)
T ss_pred HHHHHHHhc
Confidence 999988863
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=265.84 Aligned_cols=233 Identities=28% Similarity=0.329 Sum_probs=184.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++++.|+++|++|++++|+.++ + . .+.++.++++|+++.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~-----------------~~~~~~~~~~D~~~~ 59 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V-----------------DGRPAEFHAADVRDP 59 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h-----------------cCCceEEEEccCCCH
Confidence 46999999999999999999999999999999998754 0 1 234677899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+.++++|+||||||+.. ..++.+.+.+++++++++|+.+++.+++++.|.|.++...|+||++||. +
T Consensus 60 ~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~-~ 137 (252)
T PRK07856 60 DQVAALVDAIVERHGRLDVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSV-S 137 (252)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc-c
Confidence 9999999999999999999999999865 4677889999999999999999999999999999875446899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+++..|+++|+++++|+++++.|+.+. |+||+|+||+++|++....... ..... ......+..+..
T Consensus 138 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~-~~~~~-------~~~~~~~~~~~~ 208 (252)
T PRK07856 138 GRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGD-AEGIA-------AVAATVPLGRLA 208 (252)
T ss_pred cCCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccC-HHHHH-------HHhhcCCCCCCc
Confidence 77788889999999999999999999999987 9999999999999975321110 00000 000011234445
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCC
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
.|++++..+.||+++...++++..+..++
T Consensus 209 ~p~~va~~~~~L~~~~~~~i~G~~i~vdg 237 (252)
T PRK07856 209 TPADIAWACLFLASDLASYVSGANLEVHG 237 (252)
T ss_pred CHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence 56666666677777665444444433333
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=266.84 Aligned_cols=243 Identities=24% Similarity=0.290 Sum_probs=191.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+.+ .++..+++.+ .+.++.++.+|+++.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 66 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCG-----------------RGHRCTAVVADVRDP 66 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHH-----------------hCCceEEEECCCCCH
Confidence 3599999999999999999999999999999999875 3344445433 234678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|+|.+. +.++||++||..+
T Consensus 67 ~~v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~ 144 (263)
T PRK08226 67 ASVAAAIKRAKEKEGRIDILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSVTG 144 (263)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEECcHHh
Confidence 9999999999999999999999999876 4778889999999999999999999999999999876 4679999998633
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH-----H
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART-----L 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~-----~ 245 (347)
...+.+++..|+++|+++++++++++.|+.+.||+|++|+||+++|++......... ...++.+.+. +
T Consensus 145 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~p 217 (263)
T PRK08226 145 DMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSN-------PEDPESVLTEMAKAIP 217 (263)
T ss_pred cccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhcc-------CCCcHHHHHHHhccCC
Confidence 245667888999999999999999999999999999999999999998643211000 0011111111 2
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+.++..|++++..+.||+++...++++..+..+|+
T Consensus 218 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 218 LRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred CCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence 34455677777777788887665555555544444
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=263.20 Aligned_cols=216 Identities=14% Similarity=0.155 Sum_probs=173.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|++++.. ++++. . .+.++.+|++|.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~-----------------~--~~~~~~~D~~~~~ 59 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ-----------------A--GAQCIQADFSTNA 59 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH-----------------c--CCEEEEcCCCCHH
Confidence 589999999999999999999999999999999876532 33322 1 2567899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~Iv~vsS~~~ 170 (347)
+++++++++.+.++++|++|||||+..+ ....+.+.++|++++++|+.+++.+++.++|.|++++ +.++||++||. .
T Consensus 60 ~~~~~~~~~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~-~ 137 (236)
T PRK06483 60 GIMAFIDELKQHTDGLRAIIHNASDWLA-EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDY-V 137 (236)
T ss_pred HHHHHHHHHHhhCCCccEEEECCccccC-CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcch-h
Confidence 9999999999999999999999998652 4456778999999999999999999999999998752 15799999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+++..|++||+|+++|+++++.|+++ +||||+|+||++.|+... .. ... .+..++.++++..
T Consensus 138 ~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~---~~---~~~------~~~~~~~~~~~~~ 204 (236)
T PRK06483 138 VEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD---DA---AYR------QKALAKSLLKIEP 204 (236)
T ss_pred hccCCCCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC---CH---HHH------HHHhccCccccCC
Confidence 6677788899999999999999999999987 599999999999875421 00 000 0111222344555
Q ss_pred hccccccceeeccc
Q 019009 251 VVKGSGKAINYLTP 264 (347)
Q Consensus 251 ~~~~~~~~~~~l~~ 264 (347)
.|++++..+.||++
T Consensus 205 ~~~~va~~~~~l~~ 218 (236)
T PRK06483 205 GEEEIIDLVDYLLT 218 (236)
T ss_pred CHHHHHHHHHHHhc
Confidence 56666666667765
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=243.96 Aligned_cols=183 Identities=24% Similarity=0.321 Sum_probs=165.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
|.|+|||||++|||+++|++|.+.|-+||+++|++++++++.++. ..+....||+.|.+
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~---------------------p~~~t~v~Dv~d~~ 63 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---------------------PEIHTEVCDVADRD 63 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC---------------------cchheeeecccchh
Confidence 679999999999999999999999999999999999988776643 45778899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++++++++.++|..+++||||||+.....-. .+...++.+..+++|+.+|+.++++++|++.++ +.+.||||||. -
T Consensus 64 ~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-~~a~IInVSSG-L 141 (245)
T COG3967 64 SRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-PEATIINVSSG-L 141 (245)
T ss_pred hHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-CCceEEEeccc-c
Confidence 99999999999999999999999997632222 344567788999999999999999999999998 48899999985 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
+..+....+.||++|+|++.|+.+|+..++..+|+|.-+.|..|+|+
T Consensus 142 afvPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 142 AFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred ccCcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 77888888999999999999999999999999999999999999997
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=264.33 Aligned_cols=187 Identities=27% Similarity=0.404 Sum_probs=166.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+.. +..+++ .+.++.++++|+++.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~-------------------~~~~~~~~~~Dl~~~ 73 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL-------------------LGGNAKGLVCDVSDS 73 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh-------------------hCCceEEEEecCCCH
Confidence 479999999999999999999999999999999987642 222222 123566899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||. .
T Consensus 74 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~ 150 (255)
T PRK06841 74 QSVEAAVAAVISAFGRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNLASQ-A 150 (255)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-CCceEEEEcch-h
Confidence 9999999999999999999999999876 4677888999999999999999999999999999876 47899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+....|+++|+++++++++++.|++++||+||+|+||+++|++..
T Consensus 151 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~ 200 (255)
T PRK06841 151 GVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGK 200 (255)
T ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccc
Confidence 66788888999999999999999999999999999999999999999854
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=253.19 Aligned_cols=216 Identities=28% Similarity=0.363 Sum_probs=182.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
||++++||+.+|||++++++|+++|..+.++..+.+.. +...++++.+ +..++.+++||+++..
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~---------------p~~~v~F~~~DVt~~~ 68 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAIN---------------PSVSVIFIKCDVTNRG 68 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccC---------------CCceEEEEEeccccHH
Confidence 79999999999999999999999999888877776664 3445565543 3468999999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEcCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAG 169 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vsS~~ 169 (347)
++++.++++.+.||.||++|||||+.. ..+|++++++|+.|.+.-+...+|+|.+++ ++|.|||+||.
T Consensus 69 ~~~~~f~ki~~~fg~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv- 138 (261)
T KOG4169|consen 69 DLEAAFDKILATFGTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV- 138 (261)
T ss_pred HHHHHHHHHHHHhCceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc-
Confidence 999999999999999999999999853 356999999999999999999999998875 67899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhH--hcCCCeEEEEeeCCcccCcccccCcc---------cchhhhhhhccCCH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGST---------IQNKQMFNIICELP 238 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~e--l~~~gI~v~~i~PG~v~T~~~~~~~~---------~~~~~~~~~~~~~p 238 (347)
.+..+.|-.+.|++||+++.+|+|+||.+ |.+.||++++||||+++|.+...... ...+.+......+|
T Consensus 139 ~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~ 218 (261)
T KOG4169|consen 139 AGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSP 218 (261)
T ss_pred cccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCH
Confidence 79999999999999999999999999876 45779999999999999998755421 11122333445678
Q ss_pred HHHHHHHhhhhhhcc
Q 019009 239 ETVARTLVPRIRVVK 253 (347)
Q Consensus 239 e~~a~~~~~~~~~~~ 253 (347)
..++..++..++.++
T Consensus 219 ~~~a~~~v~aiE~~~ 233 (261)
T KOG4169|consen 219 ACCAINIVNAIEYPK 233 (261)
T ss_pred HHHHHHHHHHHhhcc
Confidence 888888887777643
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=263.44 Aligned_cols=238 Identities=24% Similarity=0.335 Sum_probs=191.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+++||||++|||++++++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++|+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~~ 63 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ-----------------AGGKAVAYKLDVSDKDQ 63 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCCCHHH
Confidence 6899999999999999999999999999999998888777777754 34578899999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++.+.++++++|+||||||... ..++.+.+.+++++++++|+.+++.+++++++.|++++.+++||++||. .+.
T Consensus 64 i~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~ 141 (254)
T TIGR02415 64 VFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASI-AGH 141 (254)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecch-hhc
Confidence 99999999999999999999999866 4788899999999999999999999999999999887546899999987 566
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-HHHHhhhhhh
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLVPRIRV 251 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~~~~~~~~ 251 (347)
.+.+....|++||++++.|++.|+.|+.+.||+|++|+||+++|++....................+.. ...+.++...
T Consensus 142 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
T TIGR02415 142 EGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSE 221 (254)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCC
Confidence 778889999999999999999999999999999999999999999854322111100000000000111 1122344566
Q ss_pred ccccccceeeccchHHHH
Q 019009 252 VKGSGKAINYLTPPRILL 269 (347)
Q Consensus 252 ~~~~~~~~~~l~~~~~~~ 269 (347)
|+++++++.||+++....
T Consensus 222 ~~~~a~~~~~l~~~~~~~ 239 (254)
T TIGR02415 222 PEDVAGLVSFLASEDSDY 239 (254)
T ss_pred HHHHHHHHHhhcccccCC
Confidence 677777777777765433
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=263.02 Aligned_cols=187 Identities=23% Similarity=0.277 Sum_probs=164.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...||+++||||++|||+++|+.|+++|++|++++|++++.++..+++ +.++.++++|++
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~Dl~ 66 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL--------------------GENAWFIAMDVA 66 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc--------------------CCceEEEEccCC
Confidence 344799999999999999999999999999999999887665543322 235778999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+.++++++++++.++++++|++|||||...+ ..++.+.+.++++.++++|+.+++.++++++|+|.+. .++||++||
T Consensus 67 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS 144 (255)
T PRK05717 67 DEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLAS 144 (255)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcc
Confidence 9999999999999999999999999998642 2567788999999999999999999999999999764 579999998
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
. .+..+.+....|++||+|++.+++++++|+.+ +|+|++|+||+++|++.
T Consensus 145 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~ 194 (255)
T PRK05717 145 T-RARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDP 194 (255)
T ss_pred h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCcc
Confidence 7 56777788899999999999999999999986 59999999999999874
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=260.55 Aligned_cols=182 Identities=26% Similarity=0.337 Sum_probs=164.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+++++++. .+ ..+.++.+|++|.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~----~~-------------------~~~~~~~~Dv~~~~ 59 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL----AS-------------------LGVHPLSLDVTDEA 59 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hh-------------------CCCeEEEeeCCCHH
Confidence 58999999999999999999999999999999998765432 11 23678899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|+||||||+.. ..++.+.+.++++.++++|+.+++.+++.++|.|+++ +.|+||++||. ++
T Consensus 60 ~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~-~~ 136 (273)
T PRK06182 60 SIKAAVDTIIAEEGRIDVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSM-GG 136 (273)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcch-hh
Confidence 999999999999999999999999876 5788899999999999999999999999999999876 46899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
..+.+....|++||+++++|+++|+.|+.+.||+|++|+||+++|++.
T Consensus 137 ~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 184 (273)
T PRK06182 137 KIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG 184 (273)
T ss_pred cCCCCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence 666777789999999999999999999999999999999999999975
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=261.26 Aligned_cols=217 Identities=19% Similarity=0.260 Sum_probs=179.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-------HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.++ +++..++++. .+.++.++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-----------------~~~~~~~~ 67 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA-----------------AGGQALPL 67 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh-----------------cCCceEEE
Confidence 46899999999999999999999999999999998653 3334444433 34578899
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.+|+++.+++.++++++.++++++|+||||||... ..++.+.+.+++++++++|+.+++.++++++|+|+++ .+|+||
T Consensus 68 ~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~g~iv 145 (273)
T PRK08278 68 VGDVRDEDQVAAAVAKAVERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-ENPHIL 145 (273)
T ss_pred EecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-CCCEEE
Confidence 99999999999999999999999999999999866 4678889999999999999999999999999999876 468999
Q ss_pred EEcCCCCCCCCC--CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCC-cccCcccccCcccchhhhhhhccCCHHH
Q 019009 164 NMDGAGSGGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLLSGSTIQNKQMFNIICELPET 240 (347)
Q Consensus 164 ~vsS~~~~~~~~--~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG-~v~T~~~~~~~~~~~~~~~~~~~~~pe~ 240 (347)
++||. .+..+. +++..|++||+|+++|+++|+.|+.++||+||+|+|| +++|++........ . ......+|++
T Consensus 146 ~iss~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~-~--~~~~~~~p~~ 221 (273)
T PRK08278 146 TLSPP-LNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGD-E--AMRRSRTPEI 221 (273)
T ss_pred EECCc-hhccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccccc-c--cccccCCHHH
Confidence 99987 455554 7788999999999999999999999999999999999 68998654322111 0 0112247888
Q ss_pred HHHHHhhhhh
Q 019009 241 VARTLVPRIR 250 (347)
Q Consensus 241 ~a~~~~~~~~ 250 (347)
+|+.++..+.
T Consensus 222 va~~~~~l~~ 231 (273)
T PRK08278 222 MADAAYEILS 231 (273)
T ss_pred HHHHHHHHhc
Confidence 8887775544
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=257.76 Aligned_cols=188 Identities=22% Similarity=0.326 Sum_probs=171.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|.|+|||+-+|+|+.+|++|.++|++|+..+-+++..++...+.+ ..++..+.+|++++
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-------------------s~rl~t~~LDVT~~ 88 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-------------------SPRLRTLQLDVTKP 88 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-------------------CCcceeEeeccCCH
Confidence 45999999999999999999999999999999988877666555542 36788899999999
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g--~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
++|+++.+.+.++.+ ++..||||||+....++.+-.+.++++++++||++|++.++++++|+++++ +||||||||.
T Consensus 89 esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~ 166 (322)
T KOG1610|consen 89 ESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSV 166 (322)
T ss_pred HHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEeccc
Confidence 999999998887653 599999999987667889999999999999999999999999999999986 7999999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.++.+.|..++|++||+|++.|+.+|++|+.++||+|..|.||+++|++..
T Consensus 167 -~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 167 -LGRVALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred -ccCccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 789999999999999999999999999999999999999999999999875
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=261.11 Aligned_cols=187 Identities=26% Similarity=0.331 Sum_probs=167.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|++++++...+. .+.++..+.+|++|.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~--------------------~~~~~~~~~~D~~d~ 62 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL--------------------HPDRALARLLDVTDF 62 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh--------------------cCCCeeEEEccCCCH
Confidence 368999999999999999999999999999999998776543221 234678889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.+.+.++++|+||||||... ..++.+.+.+++++++++|+.|++.++++++|+|+++ +.++||++||. +
T Consensus 63 ~~~~~~~~~~~~~~~~~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~iSS~-~ 139 (277)
T PRK06180 63 DAIDAVVADAEATFGPIDVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSM-G 139 (277)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCCEEEEEecc-c
Confidence 9999999999999999999999999876 5778889999999999999999999999999999877 46899999997 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.|++..|+++|+++++++++++.|+.+.||+|++|+||++.|++..
T Consensus 140 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~ 189 (277)
T PRK06180 140 GLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG 189 (277)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence 66778889999999999999999999999999999999999999998743
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=253.84 Aligned_cols=220 Identities=24% Similarity=0.331 Sum_probs=188.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|++++.++..+++++ .+.++.++.+|++|.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 67 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS-----------------TGVKAAAYSIDLSNP 67 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------CCCcEEEEEccCCCH
Confidence 468999999999999999999999999999999999887777666654 345788899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.+.++++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|.++ +.++||++||. .
T Consensus 68 ~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~-~ 144 (241)
T PRK07454 68 EAIAPGIAELLEQFGCPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSI-A 144 (241)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccH-H
Confidence 9999999999999999999999999876 4677888999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+++..|+++|++++.++++++.|+++.||++++|+||+++|++...... ..........+|+++|+.++..+.
T Consensus 145 ~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~--~~~~~~~~~~~~~~va~~~~~l~~ 222 (241)
T PRK07454 145 ARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETV--QADFDRSAMLSPEQVAQTILHLAQ 222 (241)
T ss_pred hCcCCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccccc--ccccccccCCCHHHHHHHHHHHHc
Confidence 667778889999999999999999999999999999999999999998543211 111111233578999999887665
Q ss_pred hc
Q 019009 251 VV 252 (347)
Q Consensus 251 ~~ 252 (347)
.+
T Consensus 223 ~~ 224 (241)
T PRK07454 223 LP 224 (241)
T ss_pred CC
Confidence 54
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=261.14 Aligned_cols=240 Identities=20% Similarity=0.267 Sum_probs=194.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++++.|+++|++|++++|++++++++.+++.. .+.++.++.+|+++.
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 70 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEA-----------------EGGAAHVVSLDVTDY 70 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCH
Confidence 369999999999999999999999999999999999988877776654 234678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-------CcEEE
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-------GGHIF 163 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-------~g~Iv 163 (347)
++++++++++.+.++++|++|||||... ..++.+.+.++++.++++|+.+++.++++++|.|.++.. .++||
T Consensus 71 ~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv 149 (258)
T PRK06949 71 QSIKAAVAHAETEAGTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRII 149 (258)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEE
Confidence 9999999999999999999999999865 467778889999999999999999999999999987632 47999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
++||. .+..+.+....|+++|++++.+++.++.|+.+.||+|++|+||+++|++......... ...+.+
T Consensus 150 ~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~ 218 (258)
T PRK06949 150 NIASV-AGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQ----------GQKLVS 218 (258)
T ss_pred EECcc-cccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHH----------HHHHHh
Confidence 99987 5666777888999999999999999999999999999999999999998543211100 011111
Q ss_pred -HHhhhhhhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 244 -TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 244 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
....++..|++++..+.||+++...++++..+..+|
T Consensus 219 ~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dg 255 (258)
T PRK06949 219 MLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADD 255 (258)
T ss_pred cCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCC
Confidence 122355666777777788888776555554444443
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=259.77 Aligned_cols=235 Identities=23% Similarity=0.265 Sum_probs=188.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... ...++.++.+|+++.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~ 66 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY---------------GEGMAYGFGADATSEQ 66 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc---------------CCceeEEEEccCCCHH
Confidence 5899999999999999999999999999999999888877777665421 1146889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++++.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++..++||++||. ++
T Consensus 67 ~i~~~~~~~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~-~~ 144 (259)
T PRK12384 67 SVLALSRGVDEIFGRVDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK-SG 144 (259)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc-cc
Confidence 999999999999999999999999876 4778889999999999999999999999999999876325899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc-cCcccccCcccchhhhhhhccCCHHHHHHH-----H
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETVART-----L 245 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~-----~ 245 (347)
..+.+....|++||+|+++++++++.|++++||+|++|+||.+ .|++...... .........+++..+. .
T Consensus 145 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 220 (259)
T PRK12384 145 KVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLP----QYAKKLGIKPDEVEQYYIDKVP 220 (259)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhH----HHHHhcCCChHHHHHHHHHhCc
Confidence 6677788899999999999999999999999999999999975 6665432111 1111111123333322 2
Q ss_pred hhhhhhccccccceeeccchHH
Q 019009 246 VPRIRVVKGSGKAINYLTPPRI 267 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~ 267 (347)
+++...+++++.++.||++...
T Consensus 221 ~~~~~~~~dv~~~~~~l~~~~~ 242 (259)
T PRK12384 221 LKRGCDYQDVLNMLLFYASPKA 242 (259)
T ss_pred ccCCCCHHHHHHHHHHHcCccc
Confidence 3445566777777778876544
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=251.31 Aligned_cols=215 Identities=25% Similarity=0.298 Sum_probs=186.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.. .+.++.++.+|+++.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~ 66 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY---------------PGIKVAVAALDVNDHD 66 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC---------------CCceEEEEEcCCCCHH
Confidence 5899999999999999999999999999999999998887777665421 2457889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++++.++++++|++|||||+.. ..++.+.+.+.+++++++|+.+++.++++++|.|++. +.++||++||. .+
T Consensus 67 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~~ 143 (248)
T PRK08251 67 QVFEVFAEFRDELGGLDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSV-SA 143 (248)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEecc-cc
Confidence 999999999999999999999999976 4667788899999999999999999999999999876 46799999987 45
Q ss_pred CCCCCC-cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 172 GSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 172 ~~~~~~-~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
..+.++ ...|+.||++++.+++.++.|+...||+|++|+||+++|++...... .....+|+++++.+++.+.
T Consensus 144 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~a~~i~~~~~ 216 (248)
T PRK08251 144 VRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------TPFMVDTETGVKALVKAIE 216 (248)
T ss_pred ccCCCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------CCccCCHHHHHHHHHHHHh
Confidence 556664 67899999999999999999999889999999999999998654321 1123479999999998886
Q ss_pred h
Q 019009 251 V 251 (347)
Q Consensus 251 ~ 251 (347)
.
T Consensus 217 ~ 217 (248)
T PRK08251 217 K 217 (248)
T ss_pred c
Confidence 4
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=254.85 Aligned_cols=240 Identities=24% Similarity=0.324 Sum_probs=196.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+++++++..+++ . .+.++.++.+|++|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-----------------~~~~~~~~~~D~~d~ 65 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-----------------YPGRHRWVVADLTSE 65 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-----------------cCCceEEEEccCCCH
Confidence 3689999999999999999999999999999999998887776665 2 235788899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+ ++++|++|||||... ..++.+.+.+++++++++|+.|++.+++.++|+|.++ +.++||++||. .
T Consensus 66 ~~~~~~~~~~~~-~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~-~ 141 (263)
T PRK09072 66 AGREAVLARARE-MGGINVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-PSAMVVNVGST-F 141 (263)
T ss_pred HHHHHHHHHHHh-cCCCCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEecCh-h
Confidence 999999998876 789999999999876 4778889999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|+++|+++.+++++|+.|+.+.||+|++|+||+++|++........... ......+|+++|+.++..+.
T Consensus 142 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~-~~~~~~~~~~va~~i~~~~~ 220 (263)
T PRK09072 142 GSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRA-LGNAMDDPEDVAAAVLQAIE 220 (263)
T ss_pred hCcCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccccccc-ccCCCCCHHHHHHHHHHHHh
Confidence 66778888999999999999999999999999999999999999999754322111111 11123579999999998887
Q ss_pred hccccccceeeccchHHHHHHhhhhhc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLR 277 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~ 277 (347)
... ...++..++..+.....++|
T Consensus 221 ~~~----~~~~~~~~~~~~~~~~~~~p 243 (263)
T PRK09072 221 KER----AERWLGWPEKLFVRLNGLLP 243 (263)
T ss_pred CCC----CEEecCchHHHHHHHHHHCh
Confidence 532 23456566655554444444
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=260.47 Aligned_cols=189 Identities=21% Similarity=0.283 Sum_probs=167.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||+++|++|+++|++|++. .|+.++.++..++++. .+.++..+.+|++|.
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 65 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKA-----------------LGFDFIASEGNVGDW 65 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHh-----------------cCCcEEEEEcCCCCH
Confidence 6999999999999999999999999998885 4555565555566544 345678889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.+.++++|+||||||... ..++.+.+.+++++++++|+.+++.++++++|.|.++ +.++||++||. .
T Consensus 66 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~-~ 142 (246)
T PRK12938 66 DSTKAAFDKVKAEVGEIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSV-N 142 (246)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEech-h
Confidence 9999999999999999999999999866 4678889999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+++..|+++|++++.|++++++|+.+.||++++|+||+++|++..
T Consensus 143 ~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~ 192 (246)
T PRK12938 143 GQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK 192 (246)
T ss_pred ccCCCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh
Confidence 66777888999999999999999999999999999999999999999864
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=288.70 Aligned_cols=218 Identities=28% Similarity=0.365 Sum_probs=181.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 63 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL--------------------GPDHHALAMDVSDE 63 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEeccCCH
Confidence 4699999999999999999999999999999999988877665543 23567899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.++++++|+||||||+..+ ..++.+.+.++|++++++|+.+++.++++++|+|++++.+++||++||.
T Consensus 64 ~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~- 142 (520)
T PRK06484 64 AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASG- 142 (520)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCc-
Confidence 99999999999999999999999998431 3567789999999999999999999999999999876444599999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc---hhhhhh----hccCCHHHHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ---NKQMFN----IICELPETVA 242 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~---~~~~~~----~~~~~pe~~a 242 (347)
++..+.++...|+++|+|+.+|+++|+.|+.+.||+|++|+||+|+|++........ ...... .....|++++
T Consensus 143 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 222 (520)
T PRK06484 143 AGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIA 222 (520)
T ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHH
Confidence 677788899999999999999999999999999999999999999999864322110 000000 1123688888
Q ss_pred HHHhhhh
Q 019009 243 RTLVPRI 249 (347)
Q Consensus 243 ~~~~~~~ 249 (347)
+.+....
T Consensus 223 ~~v~~l~ 229 (520)
T PRK06484 223 EAVFFLA 229 (520)
T ss_pred HHHHHHh
Confidence 7776544
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=258.77 Aligned_cols=230 Identities=19% Similarity=0.256 Sum_probs=185.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++||||++|||+++|+.|+++|++|++++|+ .+++++..+++++ .+.++.++++|++|.+++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~~~ 63 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA-----------------QGGNARLLQFDVADRVAC 63 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCeEEEEEccCCCHHHH
Confidence 5899999999999999999999999999875 4556666666654 345788999999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHH-HHhHcCCCCcEEEEEcCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~l-p~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
.++++++.+.++++|++|||||+.. ..++.+.+.++++.++++|+.+++.++++++ |.++++ +.++||++||. ++.
T Consensus 64 ~~~~~~~~~~~~~i~~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~-~~~ 140 (239)
T TIGR01831 64 RTLLEADIAEHGAYYGVVLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASV-SGV 140 (239)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcch-hhc
Confidence 9999999999999999999999876 4667788999999999999999999999886 555544 46899999987 567
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhc
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~ 252 (347)
.+.+++..|+++|+++++++++|+.|+.+.||+|++|+||+++|++........ .+..+..++++...+
T Consensus 141 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 209 (239)
T TIGR01831 141 MGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDL-----------DEALKTVPMNRMGQP 209 (239)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHH-----------HHHHhcCCCCCCCCH
Confidence 788889999999999999999999999999999999999999999864322110 011122234555666
Q ss_pred cccccceeeccchHHHHHHhhhh
Q 019009 253 KGSGKAINYLTPPRILLALVTAW 275 (347)
Q Consensus 253 ~~~~~~~~~l~~~~~~~~~~~~~ 275 (347)
++++..+.||+++...+.++..+
T Consensus 210 ~~va~~~~~l~~~~~~~~~g~~~ 232 (239)
T TIGR01831 210 AEVASLAGFLMSDGASYVTRQVI 232 (239)
T ss_pred HHHHHHHHHHcCchhcCccCCEE
Confidence 77777777888876644444433
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=263.87 Aligned_cols=221 Identities=19% Similarity=0.175 Sum_probs=175.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+.++.++.+|++|.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl~d~ 79 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT---------------PGADVTLQELDLTSL 79 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---------------CCCceEEEECCCCCH
Confidence 57999999999999999999999999999999999998887777775421 134678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. +....+.++++..+++|+.|++.+++.++|.|++. +.++||++||.++
T Consensus 80 ~~v~~~~~~~~~~~~~iD~li~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~ 155 (306)
T PRK06197 80 ASVRAAADALRAAYPRIDLLINNAGVMY---TPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGH 155 (306)
T ss_pred HHHHHHHHHHHhhCCCCCEEEECCcccc---CCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHH
Confidence 9999999999999999999999999854 22456778899999999999999999999999876 4689999998632
Q ss_pred CC------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEe--eCCcccCcccccCcccchh---hhhhh
Q 019009 171 GG------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTA--SPGMVLTDLLLSGSTIQNK---QMFNI 233 (347)
Q Consensus 171 ~~------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i--~PG~v~T~~~~~~~~~~~~---~~~~~ 233 (347)
.. .+.+....|++||+|++.|++.|++|+++.||+|+++ +||+|+|++.......... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~ 235 (306)
T PRK06197 156 RIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPL 235 (306)
T ss_pred hccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhh
Confidence 11 1234567899999999999999999998888777655 7999999987543321111 11111
Q ss_pred ccCCHHHHHHHHhhhhh
Q 019009 234 ICELPETVARTLVPRIR 250 (347)
Q Consensus 234 ~~~~pe~~a~~~~~~~~ 250 (347)
...+|++.+...+....
T Consensus 236 ~~~~~~~g~~~~~~~~~ 252 (306)
T PRK06197 236 LAQSPEMGALPTLRAAT 252 (306)
T ss_pred hcCCHHHHHHHHHHHhc
Confidence 23466766666655444
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=261.11 Aligned_cols=190 Identities=24% Similarity=0.365 Sum_probs=171.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+.+++++..++++. .+.++.++.+|++++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 71 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA-----------------AGRRAHVVAADLAHP 71 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCH
Confidence 469999999999999999999999999999999999888777777654 235688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.+.++++|+||||||... ..++.+.+.++++.++++|+.+++.+++++.|+|.+..+.++||++||. +
T Consensus 72 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~-~ 149 (263)
T PRK07814 72 EATAGLAGQAVEAFGRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISST-M 149 (263)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccc-c
Confidence 9999999999999999999999999865 4677889999999999999999999999999999874457899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|+++|+++++++++++.|+.+ +|+|++|+||++.|++..
T Consensus 150 ~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~ 198 (263)
T PRK07814 150 GRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALE 198 (263)
T ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhh
Confidence 6777888999999999999999999999987 699999999999999754
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=258.00 Aligned_cols=191 Identities=26% Similarity=0.355 Sum_probs=171.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++|.+
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~d~~ 68 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRA-----------------QGAEVLGVRTDVSDAA 68 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-----------------cCCeEEEEECCCCCHH
Confidence 58999999999999999999999999999999998888777777654 3457888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCC-----cEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~-----g~Iv~vs 166 (347)
+++++++.+.++++++|+||||||... ..++.+.+.++++.++++|+.|++.++++++|.|.++... ++||++|
T Consensus 69 ~~~~~~~~~~~~~g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~s 147 (287)
T PRK06194 69 QVEALADAALERFGAVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTA 147 (287)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeC
Confidence 999999999999999999999999976 4778889999999999999999999999999999876432 7999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCccccc
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~ 221 (347)
|. ++..+.++...|++||++++.|+++|+.|+. ..+|++++++||++.|++...
T Consensus 148 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~ 203 (287)
T PRK06194 148 SM-AGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS 203 (287)
T ss_pred Ch-hhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence 87 5677778889999999999999999999987 457999999999999998654
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=261.04 Aligned_cols=187 Identities=25% Similarity=0.359 Sum_probs=167.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||.+++++|+++|++|++++|+++.+++..+++.. .+.++.++.+|++++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~ 70 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ-----------------AGPEGLGVSADVRDY 70 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCceEEEECCCCCH
Confidence 469999999999999999999999999999999998887776666654 234567899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|+++ +|+||++||. +
T Consensus 71 ~~i~~~~~~~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~-~ 146 (264)
T PRK07576 71 AAVEAAFAQIADEFGPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAP-Q 146 (264)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECCh-h
Confidence 9999999999999999999999999765 4677889999999999999999999999999999764 5899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCccc-Ccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDL 218 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~-T~~ 218 (347)
+..+.+++..|+++|+++++|+++++.|+.+.||+|++|+||+++ |+.
T Consensus 147 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~ 195 (264)
T PRK07576 147 AFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG 195 (264)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH
Confidence 667788889999999999999999999999999999999999997 553
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=254.98 Aligned_cols=213 Identities=23% Similarity=0.277 Sum_probs=180.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|++++++. ..++.++.+|++|.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------------------~~~~~~~~~D~~d~ 57 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------------------IPGVELLELDVTDD 57 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------------------cCCCeeEEeecCCH
Confidence 35899999999999999999999999999999998765321 13567899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+++|++|+||||||+.. ..++.+.+.+++++++++|+.|++.++++++|+|+++ +.++||++||. +
T Consensus 58 ~~~~~~~~~~~~~~g~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~isS~-~ 134 (270)
T PRK06179 58 ASVQAAVDEVIARAGRIDVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINISSV-L 134 (270)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEECCc-c
Confidence 9999999999999999999999999976 5778889999999999999999999999999999887 57899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh------------hh---hhhcc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK------------QM---FNIIC 235 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------------~~---~~~~~ 235 (347)
+..+.|....|++||++++.|+++|+.|+++.||+|++|+||+++|++.......... .. .....
T Consensus 135 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (270)
T PRK06179 135 GFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKA 214 (270)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccC
Confidence 7778888899999999999999999999999999999999999999986543211000 00 00112
Q ss_pred CCHHHHHHHHhhhhhh
Q 019009 236 ELPETVARTLVPRIRV 251 (347)
Q Consensus 236 ~~pe~~a~~~~~~~~~ 251 (347)
..|+++|+.++..+..
T Consensus 215 ~~~~~va~~~~~~~~~ 230 (270)
T PRK06179 215 DAPEVVADTVVKAALG 230 (270)
T ss_pred CCHHHHHHHHHHHHcC
Confidence 4788899888877654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=251.50 Aligned_cols=218 Identities=23% Similarity=0.224 Sum_probs=184.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||++++++|+++|++|++++|+.+++++..+++. +.++.++.+|++|.+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~D~~~~~ 61 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-------------------AGNAWTGALDVTDRA 61 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-------------------CCceEEEEecCCCHH
Confidence 4899999999999999999999999999999999988776655542 246889999999999
Q ss_pred HHHHHHHHHHhh-cCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNE-FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~-~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++.++++.+.++ ++++|+||||||... ..++.+.+.+++++++++|+.+++.+++++.|+|+++ +.++||++||. .
T Consensus 62 ~v~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~-~ 138 (260)
T PRK08267 62 AWDAALADFAAATGGRLDVLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-PGARVINTSSA-S 138 (260)
T ss_pred HHHHHHHHHHHHcCCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEeCch-h
Confidence 999999988776 789999999999876 4778889999999999999999999999999999876 47899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch-hhh-hhhccCCHHHHHHHHhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQM-FNIICELPETVARTLVPR 248 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~-~~~-~~~~~~~pe~~a~~~~~~ 248 (347)
+..+.++...|+.||+++++|+++|+.|+.+.||+|++|+||+++|++......... ... ......+|+++++.++..
T Consensus 139 ~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ 218 (260)
T PRK08267 139 AIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAA 218 (260)
T ss_pred hCcCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHH
Confidence 777788889999999999999999999999999999999999999998654111111 111 112235789999999877
Q ss_pred hhh
Q 019009 249 IRV 251 (347)
Q Consensus 249 ~~~ 251 (347)
+..
T Consensus 219 ~~~ 221 (260)
T PRK08267 219 VQH 221 (260)
T ss_pred HhC
Confidence 753
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=254.79 Aligned_cols=214 Identities=24% Similarity=0.323 Sum_probs=179.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||++++++|+++|++|++++|+.+++++. .+ ..+.++.+|+++.+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~-------------------~~~~~~~~Dl~~~~ 57 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA-------------------AGFTAVQLDVNDGA 57 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH-------------------CCCeEEEeeCCCHH
Confidence 38999999999999999999999999999999998765432 11 13567899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.|++.++++++|.|++. .|+||++||. ++
T Consensus 58 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~-~~ 133 (274)
T PRK05693 58 ALARLAEELEAEHGGLDVLINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSV-SG 133 (274)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCc-cc
Confidence 999999999999999999999999876 4778889999999999999999999999999999764 5899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh-------------hhh------h
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK-------------QMF------N 232 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-------------~~~------~ 232 (347)
..+.+....|++||++++.|+++++.|+++.||+|++|+||+|+|++.......... .+. .
T Consensus 134 ~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (274)
T PRK05693 134 VLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQ 213 (274)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhcc
Confidence 777888899999999999999999999999999999999999999986542211000 000 0
Q ss_pred hccCCHHHHHHHHhhhhhhc
Q 019009 233 IICELPETVARTLVPRIRVV 252 (347)
Q Consensus 233 ~~~~~pe~~a~~~~~~~~~~ 252 (347)
....+|+++|+.++..+...
T Consensus 214 ~~~~~~~~~a~~i~~~~~~~ 233 (274)
T PRK05693 214 DNPTPAAEFARQLLAAVQQS 233 (274)
T ss_pred CCCCCHHHHHHHHHHHHhCC
Confidence 11247899999998877643
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=251.74 Aligned_cols=213 Identities=16% Similarity=0.212 Sum_probs=167.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++||||++|||+++++.|+++|++|++++|+.+++++..+++ .+.++++|++|.+++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~~~~~~v 59 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----------------------DVDAIVCDNTDPASL 59 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------------cCcEEecCCCCHHHH
Confidence 4899999999999999999999999999999988776554432 245788999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++++.+.+ ++|+||||||.... ..++.+ +.++|++++++|+.++++++++++|.|++ +|+||++||.
T Consensus 60 ~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~ 132 (223)
T PRK05884 60 EEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPE 132 (223)
T ss_pred HHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecC
Confidence 999887642 69999999985321 112333 57899999999999999999999999963 4899999986
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+ .+....|++||+|+.+|+++|+.|++++||+||+|+||+++|++..... ..+...|+++++.
T Consensus 133 -~----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~--------~~p~~~~~~ia~~---- 195 (223)
T PRK05884 133 -N----PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS--------RTPPPVAAEIARL---- 195 (223)
T ss_pred -C----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc--------CCCCCCHHHHHHH----
Confidence 3 3456889999999999999999999999999999999999998743211 0111245555554
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+.||+++...++++..+..+|++.
T Consensus 196 ----------~~~l~s~~~~~v~G~~i~vdgg~~ 219 (223)
T PRK05884 196 ----------ALFLTTPAARHITGQTLHVSHGAL 219 (223)
T ss_pred ----------HHHHcCchhhccCCcEEEeCCCee
Confidence 457777777666666666666553
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=257.06 Aligned_cols=239 Identities=23% Similarity=0.267 Sum_probs=183.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+++|+.|+++|++|+++.+ ++++.+....++ +.++.++.+|++|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~D~~~ 63 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL--------------------GDRAIALQADVTD 63 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh--------------------CCceEEEEcCCCC
Confidence 4689999999999999999999999999998765 444443332221 2467889999999
Q ss_pred HHHHHHHHHHHHhhcCC-ccEEEEcCCCCC-----CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 90 PADVQKLSNFAVNEFGS-IDIWINNAGTNK-----GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~-iD~li~nAG~~~-----~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.++++++++++.+.+++ +|++|||||... ...++.+.+.+++++++++|+.+++.++++++|.|.++ +.++||
T Consensus 64 ~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv 142 (253)
T PRK08642 64 REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-GFGRII 142 (253)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-CCeEEE
Confidence 99999999999988887 999999999742 12457788999999999999999999999999999876 468999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
+++|. ....+.+.+..|++||+|+++|++++++|+.+.||+||+|+||+++|+....... ..... .....
T Consensus 143 ~iss~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~~~------~~~~~ 212 (253)
T PRK08642 143 NIGTN-LFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP---DEVFD------LIAAT 212 (253)
T ss_pred EECCc-cccCCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC---HHHHH------HHHhc
Confidence 99986 4555556677999999999999999999999999999999999999985432111 00000 00011
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.++.++..|++++..+.||+++.....++..+..+|+
T Consensus 213 ~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 213 TPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred CCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 1234556666777777788887665555555555544
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=255.65 Aligned_cols=191 Identities=20% Similarity=0.287 Sum_probs=163.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++|+.|+++|++|++++|+++++++..+++.... ....+.++.+|++|+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl~d~ 67 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEF---------------KSKKLSLVELDITDQ 67 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhc---------------CCCceeEEEecCCCH
Confidence 47999999999999999999999999999999999998888877775421 123456779999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCC--CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~--~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++.++++.+.++++++|+||||||... ...++.+.+.++++..+++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 68 ~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~ 146 (256)
T PRK09186 68 ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNISSI 146 (256)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCceEEEEech
Confidence 9999999999999999999999998642 12467889999999999999999999999999999877 46799999986
Q ss_pred CCCCCCC----------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 169 GSGGSST----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 169 ~~~~~~~----------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
++..+. .....|++||+++++|+++++.|+.+.||+|++|+||.+.|+.
T Consensus 147 -~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 147 -YGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ 205 (256)
T ss_pred -hhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence 332211 1224699999999999999999999999999999999998764
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=251.29 Aligned_cols=190 Identities=24% Similarity=0.354 Sum_probs=171.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||++++++|+++|++|++ ..|+.++.++..++++. .+.++.++.+|++|+
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 66 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA-----------------LGRKALAVKANVGDV 66 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCCCH
Confidence 589999999999999999999999999876 58888888777777765 345788899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.+.++++|+||||||... ..++.+.+.++++.++++|+.+++.++++++|.|+++ +.|+||++||. .
T Consensus 67 ~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~-~ 143 (250)
T PRK08063 67 EKIKEMFAQIDEEFGRLDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-GGGKIISLSSL-G 143 (250)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEcch-h
Confidence 9999999999999999999999999876 4788899999999999999999999999999999876 47899999987 4
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
...+.+....|+++|++++.|+++++.|+.+.||++++|+||++.|++...
T Consensus 144 ~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~ 194 (250)
T PRK08063 144 SIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH 194 (250)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence 566677888999999999999999999999999999999999999998643
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=258.58 Aligned_cols=187 Identities=20% Similarity=0.214 Sum_probs=165.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|++++. +..+++.+ .+.++.++.+|+++.
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~-----------------~~~~~~~~~~D~~~~ 67 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRA-----------------LQPRAEFVQVDLTDD 67 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHh-----------------cCCceEEEEccCCCH
Confidence 369999999999999999999999999999999998876 55566644 345688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.++++|++|||||... ...+.+.+ ++++..+++|+.+++.+++.++|.|++. .++||++||. .
T Consensus 68 ~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~-~ 142 (258)
T PRK08628 68 AQCRDAVEQTVAKFGRIDGLVNNAGVND-GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSK-T 142 (258)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCcccC-CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCH-H
Confidence 9999999999999999999999999765 34454444 9999999999999999999999999764 5899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+.+..|++||+++++++++++.|+.++||+|++|+||.++|++..
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~ 192 (258)
T PRK08628 143 ALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE 192 (258)
T ss_pred hccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHH
Confidence 66777888999999999999999999999999999999999999999753
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=256.96 Aligned_cols=190 Identities=19% Similarity=0.286 Sum_probs=165.0
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCh-----------hHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 019009 11 CTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSS-----------ESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77 (347)
Q Consensus 11 ~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~-----------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 77 (347)
.+|++|||||++ |||+++|++|+++|++|++++|++ .......+++.. .+
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 66 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-----------------YG 66 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-----------------cC
Confidence 468999999995 999999999999999999999972 111122333322 34
Q ss_pred ceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC
Q 019009 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP 157 (347)
Q Consensus 78 ~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~ 157 (347)
.++.++++|+++.+++.++++++.+.++++|++|||||+.. ..++.+.+.+++++.+++|+.+++.++++++|.|.++
T Consensus 67 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 144 (256)
T PRK12748 67 VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK- 144 (256)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-
Confidence 57889999999999999999999999999999999999865 4778889999999999999999999999999999765
Q ss_pred CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 158 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 158 ~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..++||++||. .+..+.++...|++||+|+++++++++.|+.+.||+|++|+||+++|++..
T Consensus 145 ~~~~iv~~ss~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~ 206 (256)
T PRK12748 145 AGGRIINLTSG-QSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT 206 (256)
T ss_pred CCeEEEEECCc-cccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence 46899999987 566677788999999999999999999999999999999999999998753
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=259.61 Aligned_cols=194 Identities=15% Similarity=0.119 Sum_probs=162.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++|.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~ 67 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-----------------PPDSYTIIHIDLGDL 67 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----------------cCCceEEEEecCCCH
Confidence 369999999999999999999999999999999999988877776642 234678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-CcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~g~Iv~vsS~~ 169 (347)
++++++++++.+.++++|+||||||+..+..+..+.+.++++.++++|+.|++.++++++|.|++++. .++||++||..
T Consensus 68 ~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~ 147 (322)
T PRK07453 68 DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVT 147 (322)
T ss_pred HHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccc
Confidence 99999999988777889999999998542233456789999999999999999999999999987632 36999999863
Q ss_pred CCC----------------------------------CCCCCcchhhhHHHHHHHHHHHHHhHhc-CCCeEEEEeeCCcc
Q 019009 170 SGG----------------------------------SSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMV 214 (347)
Q Consensus 170 ~~~----------------------------------~~~~~~~~Y~asKaal~~~~~~La~el~-~~gI~v~~i~PG~v 214 (347)
+.. .+......|+.||.+...+++.|++++. ..||+|++|+||+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v 227 (322)
T PRK07453 148 ANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCV 227 (322)
T ss_pred cCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcc
Confidence 210 0112346799999999999999999995 46999999999999
Q ss_pred -cCccccc
Q 019009 215 -LTDLLLS 221 (347)
Q Consensus 215 -~T~~~~~ 221 (347)
.|++...
T Consensus 228 ~~t~~~~~ 235 (322)
T PRK07453 228 ADTPLFRN 235 (322)
T ss_pred cCCccccc
Confidence 5887543
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=256.26 Aligned_cols=187 Identities=18% Similarity=0.225 Sum_probs=154.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++++||||++|||++++++|+++|++|++++| +++++++..+++... .+.++..+.+|++|.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~d~~ 65 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR----------------RPNSAVTCQADLSNSA 65 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc----------------cCCceEEEEccCCCch
Confidence 68999999999999999999999999999875 456777666666432 2345777899999998
Q ss_pred HH----HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHHHHhHcC
Q 019009 92 DV----QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-----------EEIEQIVSTNLVGSILCTREAMRVMRDQ 156 (347)
Q Consensus 92 ~v----~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-----------e~~~~~~~vN~~g~~~l~~~~lp~l~~~ 156 (347)
++ +++++.+.+.++++|+||||||...+ .++.+.+. +++++++++|+.+++.++++++|+|+++
T Consensus 66 ~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 144 (267)
T TIGR02685 66 TLFSRCEAIIDACFRAFGRCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGT 144 (267)
T ss_pred hhHHHHHHHHHHHHHccCCceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhc
Confidence 66 45566666778999999999998652 44444333 3589999999999999999999999653
Q ss_pred -----CCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 157 -----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 157 -----~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
...++||+++|. .+..+.+++..|++||+|+++|+++|+.|+.++||+|++|+||++.|+
T Consensus 145 ~~~~~~~~~~iv~~~s~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 145 RAEQRSTNLSIVNLCDA-MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred ccccCCCCeEEEEehhh-hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 124689999887 566778888999999999999999999999999999999999999876
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=251.98 Aligned_cols=220 Identities=26% Similarity=0.408 Sum_probs=183.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+++++++..+.+ +.++..+++|++|.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~~ 62 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY--------------------GDRLLPLALDVTDRA 62 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--------------------cCCeeEEEccCCCHH
Confidence 589999999999999999999999999999999988765543322 235778899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++.+.+.++++|++|||||+.. ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. ++
T Consensus 63 ~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~-~~ 139 (275)
T PRK08263 63 AVFAAVETAVEHFGRLDIVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSI-GG 139 (275)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcCh-hh
Confidence 999999999999999999999999876 5788899999999999999999999999999999876 46799999987 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-----c-h---hhh----hhhcc-CC
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----Q-N---KQM----FNIIC-EL 237 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-----~-~---~~~----~~~~~-~~ 237 (347)
..+.+....|+++|++++.+++.|+.|+.+.||+|++|+||+++|++....... . . ..+ ..... .+
T Consensus 140 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (275)
T PRK08263 140 ISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGD 219 (275)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCC
Confidence 778888899999999999999999999999999999999999999986421100 0 0 000 01111 56
Q ss_pred HHHHHHHHhhhhhhccc
Q 019009 238 PETVARTLVPRIRVVKG 254 (347)
Q Consensus 238 pe~~a~~~~~~~~~~~~ 254 (347)
|+++++.++..+..++.
T Consensus 220 p~dva~~~~~l~~~~~~ 236 (275)
T PRK08263 220 PEAAAEALLKLVDAENP 236 (275)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 88888888877665433
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=240.85 Aligned_cols=188 Identities=26% Similarity=0.291 Sum_probs=169.4
Q ss_pred cccCCCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 8 HWSCTCRWFSVVS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 8 ~~~~~k~vlITGa-s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
..+.-|.|+|||+ ++|||.++|++|++.|+.|+.++|+.+...++..+ ..+..+++|
T Consensus 3 ~~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----------------------~gl~~~kLD 60 (289)
T KOG1209|consen 3 LQSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----------------------FGLKPYKLD 60 (289)
T ss_pred cccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----------------------hCCeeEEec
Confidence 3445689999997 58999999999999999999999998876554322 247889999
Q ss_pred CCCHHHHHHHHHHHHh-hcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 87 VCEPADVQKLSNFAVN-EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~-~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
+++++++.++..++++ .+|++|+|+||||... ..|..+.+.++.+++|++|++|+++++|++...+.+. +|.|||+
T Consensus 61 V~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnv 137 (289)
T KOG1209|consen 61 VSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNV 137 (289)
T ss_pred cCChHHHHHHHHHHhhCCCCceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEe
Confidence 9999999999999988 7899999999999988 5889999999999999999999999999999666664 7999999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
.|. ++..+.|..+.|++||+|+++++++|+.|++++||+|..+.||.|.|++..+
T Consensus 138 gSl-~~~vpfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 138 GSL-AGVVPFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred cce-eEEeccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 998 7888999999999999999999999999999999999999999999998765
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=259.91 Aligned_cols=190 Identities=23% Similarity=0.285 Sum_probs=166.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||++++++|+++|++|++++|+.+ .++...+.++. .+.++.++.+|+++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~ 107 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-----------------EGVKCLLIPGDVSD 107 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-----------------cCCeEEEEEccCCC
Confidence 3689999999999999999999999999999999864 34444444433 34578899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++++.+.++++|+||||||......++.+.+.++|++++++|+.+++.++++++|.|++ .++||++||.
T Consensus 108 ~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~- 183 (290)
T PRK06701 108 EAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSI- 183 (290)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecc-
Confidence 999999999999999999999999998643466788999999999999999999999999999953 4789999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
++..+.++...|++||+|++.|+++++.|+.+.||+|++|+||+++|++...
T Consensus 184 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~ 235 (290)
T PRK06701 184 TGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS 235 (290)
T ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence 5667778889999999999999999999999999999999999999997543
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=257.52 Aligned_cols=187 Identities=24% Similarity=0.353 Sum_probs=158.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~----~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+|+++||||++|||+++|++|+++|++|++++++. +.+++..++++. .+.++.++++|+
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~ 70 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA-----------------AGAKAVAFQADL 70 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHH-----------------hCCcEEEEecCc
Confidence 58999999999999999999999999977776543 334444444433 234688899999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE-c
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-D 166 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v-s 166 (347)
+++++++++++++.++++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|+|++ .++|+++ |
T Consensus 71 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~s 146 (257)
T PRK12744 71 TTAAAVEKLFDDAKAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVT 146 (257)
T ss_pred CCHHHHHHHHHHHHHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEec
Confidence 9999999999999999999999999999866 467788999999999999999999999999999964 3567766 4
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
|. .+ ...+++..|++||+|+++|+++|+.|+.++||+|++|+||++.|++...
T Consensus 147 s~-~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~ 199 (257)
T PRK12744 147 SL-LG-AFTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYP 199 (257)
T ss_pred ch-hc-ccCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcc
Confidence 43 22 3457788999999999999999999999999999999999999997543
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=252.28 Aligned_cols=189 Identities=28% Similarity=0.426 Sum_probs=167.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+|+++||||++|||+++|+.|+++|++|+++.|+.+ ..++..+++.. .+.++.++.+|++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~ 65 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-----------------AGGRAIAVQADVA 65 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence 34699999999999999999999999999998877644 45555555544 3457889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.++++++++++.++++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|.+ .++||++||.
T Consensus 66 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~ 141 (245)
T PRK12937 66 DAAAVTRLFDAAETAFGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTS 141 (245)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeec
Confidence 999999999999999999999999999865 467788899999999999999999999999999963 4799999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+...+.|.+..|+++|++++.|+++++.|+.+.||++++|+||+++|++..
T Consensus 142 -~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~ 192 (245)
T PRK12937 142 -VIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF 192 (245)
T ss_pred -cccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc
Confidence 566778888999999999999999999999999999999999999999853
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=254.13 Aligned_cols=184 Identities=26% Similarity=0.346 Sum_probs=164.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~~ 65 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL--------------------GESALVIRADAGDVA 65 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh--------------------CCceEEEEecCCCHH
Confidence 589999999999999999999999999999999987665544432 246778999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++.+.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|+|.+ .+++|+++|. ++
T Consensus 66 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~-~~ 140 (249)
T PRK06500 66 AQKALAQALAEAFGRLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSI-NA 140 (249)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEech-Hh
Confidence 999999999999999999999999876 467788899999999999999999999999999963 4678888876 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..+.+....|+++|+++++++++++.|+.++||+|++|+||+++|++..
T Consensus 141 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~ 189 (249)
T PRK06500 141 HIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYG 189 (249)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHH
Confidence 6777888999999999999999999999999999999999999999754
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=251.93 Aligned_cols=191 Identities=26% Similarity=0.377 Sum_probs=165.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||+++|+.|+++|++|+++. |+++++++..++++. .+.++.+++||+++.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 64 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-----------------AGGRACVVAGDVANE 64 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEeccCCH
Confidence 47999999999999999999999999998764 666777766666654 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vsS~ 168 (347)
++++++++++.+.++++|+||||||...+..++.+.+.++++.++++|+.+++.++++++|.|..++ +.++||++||.
T Consensus 65 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~ 144 (248)
T PRK06947 65 ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSI 144 (248)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 9999999999999999999999999865345677889999999999999999999999999987642 25789999987
Q ss_pred CCCCCCCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++..+.+ .+..|++||+++++|+++|+.|+.+.||+|+.|+||+++|++..
T Consensus 145 -~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~ 196 (248)
T PRK06947 145 -ASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA 196 (248)
T ss_pred -hhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence 4544444 35689999999999999999999999999999999999999854
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=244.46 Aligned_cols=213 Identities=21% Similarity=0.222 Sum_probs=182.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|++++.++..+++... .+.++.++++|++|.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~~~ 64 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR----------------GAVAVSTHELDILDTA 64 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCeEEEEecCCCChH
Confidence 479999999999999999999999999999999998887777666542 2357889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+ .+|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.++ +.++||++||. .+
T Consensus 65 ~~~~~~~~~~~---~~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~ 138 (243)
T PRK07102 65 SHAAFLDSLPA---LPDIVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-GSGTIVGISSV-AG 138 (243)
T ss_pred HHHHHHHHHhh---cCCEEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCCEEEEEecc-cc
Confidence 99999988754 4699999999866 3667788999999999999999999999999999876 47899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|+++|+++++++++++.|+.+.||+|++|+||+++|++..... .......+|+++++.+++.+..
T Consensus 139 ~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~a~~i~~~~~~ 212 (243)
T PRK07102 139 DRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------LPGPLTAQPEEVAKDIFRAIEK 212 (243)
T ss_pred cCCCCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC------CCccccCCHHHHHHHHHHHHhC
Confidence 6777888899999999999999999999999999999999999999754322 1122345799999999987774
Q ss_pred c
Q 019009 252 V 252 (347)
Q Consensus 252 ~ 252 (347)
.
T Consensus 213 ~ 213 (243)
T PRK07102 213 G 213 (243)
T ss_pred C
Confidence 3
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=251.58 Aligned_cols=228 Identities=19% Similarity=0.295 Sum_probs=174.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|++|||||++|||+++|++|+++|++|++++| +.++++++.+++ .+.++.+|++|.
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~----------------------~~~~~~~D~~~~ 63 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET----------------------GATAVQTDSADR 63 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh----------------------CCeEEecCCCCH
Confidence 699999999999999999999999999998876 444443332211 245678999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ +++++|++|||||... ..+..+.+.+++++++++|+.+++.+++.++|.|++ .++||++||..+
T Consensus 64 ~~~~~~~~----~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~ 135 (237)
T PRK12742 64 DAVIDVVR----KSGALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNG 135 (237)
T ss_pred HHHHHHHH----HhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEecccc
Confidence 98887765 3578999999999865 466778899999999999999999999999999963 579999998743
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
...+.++...|+++|++++.+++.++.|+.+.||+||+|+||+++|++...... ..+.. .....+++..
T Consensus 136 ~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~~----------~~~~~~~~~~ 204 (237)
T PRK12742 136 DRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-MKDMM----------HSFMAIKRHG 204 (237)
T ss_pred ccCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-HHHHH----------HhcCCCCCCC
Confidence 345678889999999999999999999999999999999999999998532111 00000 0011234445
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.|++++..+.||+++...++++..+..+|+
T Consensus 205 ~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 205 RPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred CHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence 566666677788877665555555555444
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=245.95 Aligned_cols=192 Identities=17% Similarity=0.237 Sum_probs=169.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC--
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE-- 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~-- 89 (347)
+|+++||||++|||++++++|+++|++|++++|+++++++..+++.+. ...++..+.+|+++
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D~~~~~ 69 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA----------------GHPEPFAIRFDLMSAE 69 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc----------------CCCCcceEEeeecccc
Confidence 589999999999999999999999999999999999888777776542 12356678899986
Q ss_pred HHHHHHHHHHHHhhc-CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 90 PADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
.+++.++++++.+.+ +++|++|||||......++.+.+.+++++++++|+.+++.++++++|.|.+. +.++||+++|.
T Consensus 70 ~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~ss~ 148 (239)
T PRK08703 70 EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-PDASVIFVGES 148 (239)
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CCCEEEEEecc
Confidence 568999999998888 8899999999986545678899999999999999999999999999999876 46899999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCC-CeEEEEeeCCcccCccccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS-KVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~-gI~v~~i~PG~v~T~~~~~ 221 (347)
.+..+.++...|++||++++.|+++++.|+.++ +|+|++|+||+|+|++..+
T Consensus 149 -~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~ 201 (239)
T PRK08703 149 -HGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK 201 (239)
T ss_pred -ccccCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc
Confidence 677778888999999999999999999999876 6999999999999998543
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=235.19 Aligned_cols=211 Identities=23% Similarity=0.288 Sum_probs=172.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeE-EEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLS-GDRV-VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~-G~~V-il~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
|.++||||.+|||+.++++|.+. |-++ +.++|++++.. ++++.... ...+++.+++|+++.
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~---~~l~~k~~--------------~d~rvHii~Ldvt~d 66 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAA---TELALKSK--------------SDSRVHIIQLDVTCD 66 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhh---HHHHHhhc--------------cCCceEEEEEecccH
Confidence 77999999999999999999964 6554 55677788752 22322111 346899999999999
Q ss_pred HHHHHHHHHHHhh--cCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC----------C
Q 019009 91 ADVQKLSNFAVNE--FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----------K 158 (347)
Q Consensus 91 ~~v~~~~~~i~~~--~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~----------~ 158 (347)
+++.++++++.+- ..++|+||||||+..++....+.+.+.|.+++++|..|++.++|+|+|++++.. .
T Consensus 67 eS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~ 146 (249)
T KOG1611|consen 67 ESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVS 146 (249)
T ss_pred HHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccccc
Confidence 9999999999887 457999999999988777888888999999999999999999999999998752 1
Q ss_pred CcEEEEEcCCCCCCC--CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccC
Q 019009 159 GGHIFNMDGAGSGGS--STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE 236 (347)
Q Consensus 159 ~g~Iv~vsS~~~~~~--~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~ 236 (347)
+..|||+||.+++.. ....+.+|.+||+|++.|+|+|+.|+.+.+|-|..+|||||+|+|..... ..
T Consensus 147 raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a-----------~l 215 (249)
T KOG1611|consen 147 RAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA-----------AL 215 (249)
T ss_pred ceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc-----------cc
Confidence 348999998754432 23456799999999999999999999999999999999999999975322 23
Q ss_pred CHHHHHHHHhhhhhh
Q 019009 237 LPETVARTLVPRIRV 251 (347)
Q Consensus 237 ~pe~~a~~~~~~~~~ 251 (347)
++|+-+..++.-+..
T Consensus 216 tveeSts~l~~~i~k 230 (249)
T KOG1611|consen 216 TVEESTSKLLASINK 230 (249)
T ss_pred chhhhHHHHHHHHHh
Confidence 688888888766654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=244.23 Aligned_cols=218 Identities=28% Similarity=0.421 Sum_probs=187.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.. .+.++.++.+|+++++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~ 69 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-----------------YGVKVVIATADVSDYE 69 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCeEEEEECCCCCHH
Confidence 58999999999999999999999999999999999888777777754 3457889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++++.|+|.++ ..++||++||. ++
T Consensus 70 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ss~-~~ 146 (239)
T PRK07666 70 EVTAAIEQLKNELGSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-QSGDIINISST-AG 146 (239)
T ss_pred HHHHHHHHHHHHcCCccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEEcch-hh
Confidence 999999999999999999999999875 4667788999999999999999999999999999876 47899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|+++|+++..+++.++.|+.+.||++++|+||++.|++......... ......+++++|+.++..+..
T Consensus 147 ~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~a~~~~~~l~~ 223 (239)
T PRK07666 147 QKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDG---NPDKVMQPEDLAEFIVAQLKL 223 (239)
T ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccccc---CCCCCCCHHHHHHHHHHHHhC
Confidence 77778888999999999999999999999999999999999999997543221110 111234789999999888765
Q ss_pred c
Q 019009 252 V 252 (347)
Q Consensus 252 ~ 252 (347)
+
T Consensus 224 ~ 224 (239)
T PRK07666 224 N 224 (239)
T ss_pred C
Confidence 4
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=253.15 Aligned_cols=181 Identities=23% Similarity=0.302 Sum_probs=163.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+. +.. .+.++..+++|+++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-----------------~~~~~~~~~~D~~~~ 60 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-----------------EDYPFATFVLDVSDA 60 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-----------------cCCceEEEEecCCCH
Confidence 469999999999999999999999999999999986 111 234678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||. .
T Consensus 61 ~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~ss~-~ 137 (252)
T PRK08220 61 AAVAQVCQRLLAETGPLDVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTVGSN-A 137 (252)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCc-h
Confidence 9999999999999999999999999876 4778888999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+....|++||++++.|+++++.|+.+.||+|++|+||++.|++..
T Consensus 138 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~ 187 (252)
T PRK08220 138 AHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQR 187 (252)
T ss_pred hccCCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhh
Confidence 66777788999999999999999999999999999999999999999754
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=251.95 Aligned_cols=189 Identities=26% Similarity=0.439 Sum_probs=171.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++++.|+++|++|++++|++++.++..+++++ .+.++.++.+|++|.+
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~~ 69 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK-----------------AGGKAIGVAMDVTNED 69 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHh-----------------cCceEEEEECCCCCHH
Confidence 69999999999999999999999999999999999888888877755 3456888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHh-HcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM-RDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l-~~~~~~g~Iv~vsS~~~ 170 (347)
+++++++.+.++++++|+||||||... ..+..+.+.++++..+++|+.+++.+++.++|.| ++. +.++||++||. .
T Consensus 70 ~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss~-~ 146 (262)
T PRK13394 70 AVNAGIDKVAERFGSVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGSV-H 146 (262)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcch-h
Confidence 999999999999999999999999865 4677788899999999999999999999999999 554 57899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+....|+++|++++.+++.++.++.+.||++++|+||++.|++..
T Consensus 147 ~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~ 196 (262)
T PRK13394 147 SHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD 196 (262)
T ss_pred hcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh
Confidence 66677778899999999999999999999988999999999999999754
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=250.90 Aligned_cols=191 Identities=27% Similarity=0.400 Sum_probs=164.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|++|||||++|||.+++++|+++|++|+++. |++++.++..+++.. .+.++.++.+|++|.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~ 64 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR-----------------QGGEALAVAADVADE 64 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh-----------------CCCcEEEEEeccCCH
Confidence 57999999999999999999999999998887 455555555555543 334677899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vsS~ 168 (347)
+++.++++++.++++++|+||||||...+..++.+.+.+++++++++|+.+++.++++++|.|.++. ++|+||++||.
T Consensus 65 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~ 144 (248)
T PRK06123 65 ADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM 144 (248)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECch
Confidence 9999999999999999999999999865345677889999999999999999999999999997642 35789999987
Q ss_pred CCCCCCCCC-cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~-~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++..+.++ +..|+++|+++++|++.++.|+.+.||+|++|+||++.|++..
T Consensus 145 -~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~ 196 (248)
T PRK06123 145 -AARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA 196 (248)
T ss_pred -hhcCCCCCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence 45555555 4679999999999999999999999999999999999999753
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=252.40 Aligned_cols=188 Identities=21% Similarity=0.325 Sum_probs=165.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++||||++|||+++++.|+++|++|++++|+ .+++++..+++.+.. ....+..+++|++|.+++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~~~ 66 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH---------------GEGVAFAAVQDVTDEAQW 66 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC---------------CCceEEEEEeecCCHHHH
Confidence 7999999999999999999999999999998 666766666654421 112455688999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
+++++++.++++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. ++..
T Consensus 67 ~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~-~~~~ 143 (251)
T PRK07069 67 QALLAQAADAMGGLSVLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSV-AAFK 143 (251)
T ss_pred HHHHHHHHHHcCCccEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecCh-hhcc
Confidence 9999999999999999999999876 4778889999999999999999999999999999876 46899999987 6667
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCC--eEEEEeeCCcccCcccc
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLL 220 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~g--I~v~~i~PG~v~T~~~~ 220 (347)
+.+++..|+++|++++.|+++|+.|+.+.+ |+|++|+||+++|++..
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~ 192 (251)
T PRK07069 144 AEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVD 192 (251)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchh
Confidence 788889999999999999999999997654 99999999999999864
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=251.50 Aligned_cols=191 Identities=24% Similarity=0.369 Sum_probs=172.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+.++.++..+++.+ .+.++.++++|++|.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~d~~~~ 64 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA-----------------KGGNAQAFACDITDR 64 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCCH
Confidence 368999999999999999999999999999999999888777766654 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||. +
T Consensus 65 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~-~ 141 (250)
T TIGR03206 65 DSVDTAVAAAEQALGPVDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASD-A 141 (250)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECch-h
Confidence 9999999999999999999999999865 4777888999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.++...|+++|+|++.++++++.|+.+.||+++.|+||++.|++...
T Consensus 142 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~ 192 (250)
T TIGR03206 142 ARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDD 192 (250)
T ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHh
Confidence 677788889999999999999999999998889999999999999997543
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=245.25 Aligned_cols=218 Identities=25% Similarity=0.336 Sum_probs=178.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++++||||++|||+++|+.|+++|++|++++|+++++++..+++ +.++.++.+|++|.++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dl~~~~~ 60 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--------------------GDNLYIAQLDVRNRAA 60 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------ccceEEEEecCCCHHH
Confidence 37899999999999999999999999999999988766554432 2357889999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++++.++++++|++|||||+.....++.+.+.+++++++++|+.+++.+++.++|+|+++ +.++||++||. ++.
T Consensus 61 i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~-~~~ 138 (248)
T PRK10538 61 IEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGST-AGS 138 (248)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCc-ccC
Confidence 9999999999999999999999985433567788999999999999999999999999999876 46899999987 566
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC-cccch----hhhhhhccCCHHHHHHHHhh
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG-STIQN----KQMFNIICELPETVARTLVP 247 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~-~~~~~----~~~~~~~~~~pe~~a~~~~~ 247 (347)
.+.++...|+++|+++++|++.++.|+.+.||+|++|+||++.|++.... ..... .........+|+++|+.++.
T Consensus 139 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~ 218 (248)
T PRK10538 139 WPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW 218 (248)
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHH
Confidence 77788889999999999999999999999999999999999985543221 10000 01111223478888887775
Q ss_pred hhhhc
Q 019009 248 RIRVV 252 (347)
Q Consensus 248 ~~~~~ 252 (347)
.+..+
T Consensus 219 l~~~~ 223 (248)
T PRK10538 219 VATLP 223 (248)
T ss_pred HhcCC
Confidence 55433
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=244.50 Aligned_cols=205 Identities=18% Similarity=0.241 Sum_probs=171.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++++||||++|||++++++|+++|++|++++|+++++++..++ ..++.++.+|++|.+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~ 59 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ---------------------SANIFTLAFDVTDHP 59 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---------------------cCCCeEEEeeCCCHH
Confidence 47899999999999999999999999999999998766543221 235778899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.. .+|++|||||... ..+..+.+.+++++++++|+.++++++++++|+|.+ +++||++||. ++
T Consensus 60 ~~~~~~~~~~~---~~d~~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~-~~ 131 (240)
T PRK06101 60 GTKAALSQLPF---IPELWIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSI-AS 131 (240)
T ss_pred HHHHHHHhccc---CCCEEEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEech-hh
Confidence 99999887642 4799999999754 244456789999999999999999999999999963 4689999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|+++|+++++|+++|+.|+.++||+|++|+||++.|++....... .....+|+++|+.++..+..
T Consensus 132 ~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~------~~~~~~~~~~a~~i~~~i~~ 205 (240)
T PRK06101 132 ELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFA------MPMIITVEQASQEIRAQLAR 205 (240)
T ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCC------CCcccCHHHHHHHHHHHHhc
Confidence 777888899999999999999999999999999999999999999986532110 11224799999999988875
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=252.89 Aligned_cols=187 Identities=25% Similarity=0.294 Sum_probs=161.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++||||++|||++++++|+++|++|++++|+.+++++..+++ ...++.+|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~~~~ 63 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----------------------GGLFVPTDVTDE 63 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----------------------CCcEEEeeCCCH
Confidence 3699999999999999999999999999999999987765544432 124688999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.+.++++|++|||||...+ ..++.+.+.+.+++++++|+.+++.+++.++|+|+++ +.++||++||.
T Consensus 64 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~- 141 (255)
T PRK06057 64 DAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASF- 141 (255)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcch-
Confidence 99999999999999999999999997542 2456778899999999999999999999999999876 46899999986
Q ss_pred CCCCCC-CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~-~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
.+..+. ++...|+++|++++.+++.|+.|+.+.||+|++|+||+++|++...
T Consensus 142 ~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~ 194 (255)
T PRK06057 142 VAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQE 194 (255)
T ss_pred hhccCCCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhh
Confidence 344443 4677899999999999999999999899999999999999998643
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=244.19 Aligned_cols=190 Identities=25% Similarity=0.366 Sum_probs=172.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||+++|+.|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.+
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~~ 69 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA-----------------AGGRAHAIAADLADPA 69 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCHH
Confidence 59999999999999999999999999999999999888877777754 3457889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+.++++|++|||+|... ..++.+.+.++++..+++|+.+++.++++++|.|.++ +.|++|++||. .+
T Consensus 70 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~-~~ 146 (250)
T PRK12939 70 SVQRFFDAAAAALGGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-GRGRIVNLASD-TA 146 (250)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEECch-hh
Confidence 999999999999999999999999876 4677888999999999999999999999999999876 47899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
..+.+....|+++|++++.+++.++.++.+.+|+|++|+||+++|++...
T Consensus 147 ~~~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~ 196 (250)
T PRK12939 147 LWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY 196 (250)
T ss_pred ccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc
Confidence 67778888999999999999999999999899999999999999998654
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=242.41 Aligned_cols=190 Identities=25% Similarity=0.390 Sum_probs=167.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||.++|++|+++|++|+++.+ +++..++..+++.+ .+.++.++.+|+++.
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 68 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-----------------EGHDVYAVQADVSKV 68 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh-----------------cCCeEEEEECCCCCH
Confidence 699999999999999999999999999987654 55666665566544 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.++++++|++|||||... ...+.+.+.+++++++++|+.+++.++++++|.|.++ +.++||++||. .
T Consensus 69 ~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~ 145 (247)
T PRK12935 69 EDANRLVEEAVNHFGKVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-EEGRIISISSI-I 145 (247)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcch-h
Confidence 9999999999999999999999999876 4667788899999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.+++..|++||+|+++++++|+.|+.+.||+++.|+||+++|++...
T Consensus 146 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~ 196 (247)
T PRK12935 146 GQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE 196 (247)
T ss_pred hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh
Confidence 666778889999999999999999999999899999999999999987543
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=248.21 Aligned_cols=190 Identities=22% Similarity=0.327 Sum_probs=170.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++. .+.++.++.+|++|.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~D~~~~ 65 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA------------------AGGRAFARQGDVGSA 65 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh------------------cCCeEEEEEcCCCCH
Confidence 36899999999999999999999999999999999887776665553 134688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.++++++|+||||+|... ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. .
T Consensus 66 ~~~~~~~~~i~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~-~ 142 (252)
T PRK06138 66 EAVEALVDFVAARWGRLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQ-L 142 (252)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECCh-h
Confidence 9999999999999999999999999876 4677788999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.+....|+++|++++.++++++.|+.+.||+|++|+||++.|++...
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 193 (252)
T PRK06138 143 ALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR 193 (252)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh
Confidence 666777889999999999999999999999889999999999999998543
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=248.09 Aligned_cols=189 Identities=29% Similarity=0.440 Sum_probs=173.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++||||||++||++++++|+++|++|++++|+++++++..+++++ .+.++..+.+|++|.+
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~~ 66 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK-----------------AGGKAIGVAMDVTDEE 66 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCCHH
Confidence 58999999999999999999999999999999999988877777755 3457889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++.+.++++++|++|||||... ..++.+.+.++++.++++|+.+++.+++.++|.|+++ +.++||++||. .+
T Consensus 67 ~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~-~~ 143 (258)
T PRK12429 67 AINAGIDYAVETFGGVDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRIINMASV-HG 143 (258)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEEEEcch-hh
Confidence 999999999999999999999999876 4677888999999999999999999999999999887 47899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..+.++...|+++|++++.+++.++.|+.+.||+|++++||++.|++..
T Consensus 144 ~~~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~ 192 (258)
T PRK12429 144 LVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVR 192 (258)
T ss_pred ccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhh
Confidence 7788889999999999999999999999999999999999999998854
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-32 Score=245.34 Aligned_cols=190 Identities=25% Similarity=0.376 Sum_probs=166.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||.++|++|+++|++|++++|+.++++...+++.. .+.++.++.+|++|.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-----------------~~~~~~~~~~Dl~d~ 73 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA-----------------LGIDALWIAADVADE 73 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEccCCCH
Confidence 469999999999999999999999999999999999888777776654 345678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH-hHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV-MRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~-l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.++++++|++|||||... ..+..+.+.+.|++++++|+.+++.+++++.|+ |.++ +.++||++||.
T Consensus 74 ~~i~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-~~~~~v~~sS~- 150 (259)
T PRK08213 74 ADIERLAEETLERFGHVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-GYGRIINVASV- 150 (259)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-CCeEEEEECCh-
Confidence 9999999999999999999999999865 366778899999999999999999999999998 7655 46899999986
Q ss_pred CCCCCCC----CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SGGSSTP----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~~~~~~----~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.+..+.+ ....|+++|++++.+++++++++.+.||++++|+||+++|++..
T Consensus 151 ~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~ 205 (259)
T PRK08213 151 AGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR 205 (259)
T ss_pred hhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh
Confidence 3333332 34889999999999999999999999999999999999998753
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=241.58 Aligned_cols=221 Identities=17% Similarity=0.224 Sum_probs=182.5
Q ss_pred CCCcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEe
Q 019009 5 NDEHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA 84 (347)
Q Consensus 5 ~~~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (347)
.+.....+|+++||||++|||.+++++|+++|++|++++|+.+++++..+++++. ...++.++.
T Consensus 5 ~~~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~ 68 (247)
T PRK08945 5 PKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA----------------GGPQPAIIP 68 (247)
T ss_pred CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc----------------CCCCceEEE
Confidence 3344456799999999999999999999999999999999998887777777552 123456667
Q ss_pred cCCC--CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEE
Q 019009 85 CDVC--EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 162 (347)
Q Consensus 85 ~Dls--~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~I 162 (347)
+|++ +.++++++++.+.+.++++|+||||||...+..++.+.+.+++++.+++|+.+++.++++++|+|.++ +.++|
T Consensus 69 ~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~i 147 (247)
T PRK08945 69 LDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASL 147 (247)
T ss_pred ecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEE
Confidence 7775 78999999999999999999999999986545677888999999999999999999999999999887 47899
Q ss_pred EEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH
Q 019009 163 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA 242 (347)
Q Consensus 163 v~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a 242 (347)
|++||. .+..+.+++..|++||+++++++++++.++...||++++|+||++.|++......... .....+|++++
T Consensus 148 v~~ss~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~----~~~~~~~~~~~ 222 (247)
T PRK08945 148 VFTSSS-VGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGED----PQKLKTPEDIM 222 (247)
T ss_pred EEEccH-hhcCCCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCccc----ccCCCCHHHHH
Confidence 999987 5667778889999999999999999999999999999999999999987433221111 11223677777
Q ss_pred HHHhh
Q 019009 243 RTLVP 247 (347)
Q Consensus 243 ~~~~~ 247 (347)
+.++.
T Consensus 223 ~~~~~ 227 (247)
T PRK08945 223 PLYLY 227 (247)
T ss_pred HHHHH
Confidence 76654
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=247.56 Aligned_cols=190 Identities=24% Similarity=0.306 Sum_probs=165.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.|+++||||++|||+++|++|+++|++|++++|+... .++..+++.. .+.++.++.+|++|.
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 64 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF-----------------TEDQVRLKELDVTDT 64 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc-----------------cCCeEEEEEcCCCCH
Confidence 3799999999999999999999999999999998641 2222111111 235688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.+.++++++|++|||+|... ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. .
T Consensus 65 ~~v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~-~ 141 (245)
T PRK12824 65 EECAEALAEIEEEEGPVDILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSV-N 141 (245)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECCh-h
Confidence 9999999999999999999999999876 4677889999999999999999999999999999876 47899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.++...|+++|+|+++|+++++.|+.+.||++++|+||++.|++...
T Consensus 142 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 192 (245)
T PRK12824 142 GLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ 192 (245)
T ss_pred hccCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh
Confidence 667788899999999999999999999999999999999999999997543
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=251.54 Aligned_cols=193 Identities=21% Similarity=0.318 Sum_probs=170.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++++.|+++|++|++++|+++++++..+++.... .+.++.++.+|++|++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl~~~~ 71 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK---------------GAGAVRYEPADVTDED 71 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc---------------CCCceEEEEcCCCCHH
Confidence 5899999999999999999999999999999999888777666664410 1246788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++++.++++++|++|||||......++.+.+.++++.++++|+.+++.+++++++.|.++ +.++|+++||. ++
T Consensus 72 ~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~sS~-~~ 149 (276)
T PRK05875 72 QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISSI-AA 149 (276)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEech-hh
Confidence 99999999999999999999999975434667788999999999999999999999999999876 46899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
..+.+....|+++|++++.+++.++.|+...+|++++|+||+++|++...
T Consensus 150 ~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~ 199 (276)
T PRK05875 150 SNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP 199 (276)
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence 66677788999999999999999999999999999999999999998643
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=247.20 Aligned_cols=215 Identities=27% Similarity=0.342 Sum_probs=184.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+.|+-++|||||.|||++.|++||++|.+|++++|++++|+.+.+||++.+ +.++..+.+|.++
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~----------------~vev~~i~~Dft~ 110 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY----------------KVEVRIIAIDFTK 110 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh----------------CcEEEEEEEecCC
Confidence 345889999999999999999999999999999999999999999999863 4689999999999
Q ss_pred HHHH-HHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 90 PADV-QKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 90 ~~~v-~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
.+.+ +++.+.+. . ..|.+||||+|+... ...+.+.+.+.+++.+.+|.++...+++.++|.|.++ ++|.|||++|
T Consensus 111 ~~~~ye~i~~~l~-~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-~~G~IvnigS 187 (312)
T KOG1014|consen 111 GDEVYEKLLEKLA-G-LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-KKGIIVNIGS 187 (312)
T ss_pred CchhHHHHHHHhc-C-CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-CCceEEEecc
Confidence 8873 33333332 2 267799999999762 2457778888999999999999999999999999997 6899999999
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
. ++..+.|.++.|++||+.++.|+++|+.|+..+||.|.+|.|++|.|+|..... ......+|+..++..+.
T Consensus 188 ~-ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-------~sl~~ps~~tfaksal~ 259 (312)
T KOG1014|consen 188 F-AGLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-------PSLFVPSPETFAKSALN 259 (312)
T ss_pred c-cccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC-------CCCcCcCHHHHHHHHHh
Confidence 8 799999999999999999999999999999999999999999999999965433 22344589999998887
Q ss_pred hhhh
Q 019009 248 RIRV 251 (347)
Q Consensus 248 ~~~~ 251 (347)
.+..
T Consensus 260 tiG~ 263 (312)
T KOG1014|consen 260 TIGN 263 (312)
T ss_pred hcCC
Confidence 7663
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=241.27 Aligned_cols=191 Identities=31% Similarity=0.449 Sum_probs=171.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+++++++..+++.. +.++.++.+|++|.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~D~~~~ 65 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA------------------GGRAIAVAADVSDE 65 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------------------CCeEEEEECCCCCH
Confidence 358999999999999999999999999999999999887766655532 24578899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|++|||||......++.+.+.+++++.+++|+.+++.+++.+++.|.++ +.++||++||. .
T Consensus 66 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~ 143 (251)
T PRK07231 66 ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-GGGAIVNVAST-A 143 (251)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCh-h
Confidence 999999999999999999999999986545667888999999999999999999999999999876 57899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.++...|+.+|++++.+++.++.++.+.||+|++|+||++.|++...
T Consensus 144 ~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~ 194 (251)
T PRK07231 144 GLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA 194 (251)
T ss_pred hcCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh
Confidence 667788889999999999999999999999889999999999999998654
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=248.74 Aligned_cols=228 Identities=22% Similarity=0.227 Sum_probs=175.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|++... ...++.++.+|++++
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~~~~ 57 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--------------------------LSGNFHFLQLDLSDD 57 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--------------------------cCCcEEEEECChHHH
Confidence 468999999999999999999999999999999975421 123577899999987
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++.+.++++|++|||||......++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||. .
T Consensus 58 ------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~ 129 (235)
T PRK06550 58 ------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCSI-A 129 (235)
T ss_pred ------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCh-h
Confidence 444555668999999999975423567788999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|+++|+++++++++|+.|+.++||+|++|+||+++|++....... ..... .......+.+..
T Consensus 130 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~------~~~~~~~~~~~~ 201 (235)
T PRK06550 130 SFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP--GGLAD------WVARETPIKRWA 201 (235)
T ss_pred hccCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc--hHHHH------HHhccCCcCCCC
Confidence 6677788899999999999999999999999999999999999999975332110 00000 001112234455
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.+++++..+.|++++...+.++..+..+++
T Consensus 202 ~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 202 EPEEVAELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred CHHHHHHHHHHHcChhhccCCCcEEEECCc
Confidence 566666667778777654444444444443
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=245.70 Aligned_cols=224 Identities=23% Similarity=0.275 Sum_probs=185.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++++.|+++|++|++++|+++.+++..+++.... .+.++.++.+|++|.+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~d~~ 67 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLN---------------LQQNIKVQQLDVTDQN 67 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCceeEEecCCCCHH
Confidence 5899999999999999999999999999999999988877666554311 1246888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++++ ++++.+.++++|++|||||... ...+.+.+.+++++++++|+.+++.+++.++|.|++. +.++||++||. ++
T Consensus 68 ~~~~-~~~~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~-~~ 143 (280)
T PRK06914 68 SIHN-FQLVLKEIGRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINISSI-SG 143 (280)
T ss_pred HHHH-HHHHHHhcCCeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcc-cc
Confidence 9999 8999899999999999999876 3677788999999999999999999999999999876 46899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-----c-----h---hhhh------h
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----Q-----N---KQMF------N 232 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-----~-----~---~~~~------~ 232 (347)
..+.++...|+++|+++++|+++++.|+.+.||+|++|+||+++|++....... . . ..+. .
T Consensus 144 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (280)
T PRK06914 144 RVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGS 223 (280)
T ss_pred cCCCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhh
Confidence 777888899999999999999999999999999999999999999976432110 0 0 0000 0
Q ss_pred hccCCHHHHHHHHhhhhhhccc
Q 019009 233 IICELPETVARTLVPRIRVVKG 254 (347)
Q Consensus 233 ~~~~~pe~~a~~~~~~~~~~~~ 254 (347)
.....|+++|+.++..+..+..
T Consensus 224 ~~~~~~~dva~~~~~~~~~~~~ 245 (280)
T PRK06914 224 DTFGNPIDVANLIVEIAESKRP 245 (280)
T ss_pred hccCCHHHHHHHHHHHHcCCCC
Confidence 1124788999988877766543
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=242.41 Aligned_cols=219 Identities=19% Similarity=0.221 Sum_probs=176.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+|++|||||++|||++++++|+++|++|+++.| +.+.++++.+++.. .+.++.++.+|++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~ 69 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRA-----------------LGRRAVALQADLA 69 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCC
Confidence 35689999999999999999999999999988766 45556666666544 3456888999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.+++.++++++.+.++++|+||||||... ..++.+.+.+++++++++|+.+++.++++++|.|.++ ..++||+++|.
T Consensus 70 d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~~s~ 147 (258)
T PRK09134 70 DEAEVRALVARASAALGPITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-ARGLVVNMIDQ 147 (258)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECch
Confidence 999999999999999999999999999876 3677889999999999999999999999999999876 46899999876
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh---hhhccCCHHHHHHHH
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM---FNIICELPETVARTL 245 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~---~~~~~~~pe~~a~~~ 245 (347)
....+.|.+..|++||++++++++++++|+.+. |+|++|+||++.|+...... ...... ......+|+++|+.+
T Consensus 148 -~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~d~a~~~ 224 (258)
T PRK09134 148 -RVWNLNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSPE-DFARQHAATPLGRGSTPEEIAAAV 224 (258)
T ss_pred -hhcCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccChH-HHHHHHhcCCCCCCcCHHHHHHHH
Confidence 456667777899999999999999999999765 99999999999886532111 000100 001124577787777
Q ss_pred hhhhh
Q 019009 246 VPRIR 250 (347)
Q Consensus 246 ~~~~~ 250 (347)
+..+.
T Consensus 225 ~~~~~ 229 (258)
T PRK09134 225 RYLLD 229 (258)
T ss_pred HHHhc
Confidence 65554
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=245.04 Aligned_cols=188 Identities=23% Similarity=0.316 Sum_probs=167.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
|++|||||++|||+++|++|+++|++|++++| ++++.++..+++.. .+.++.++.+|++|++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~ 63 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA-----------------LGFDFRVVEGDVSSFE 63 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------hCCceEEEEecCCCHH
Confidence 78999999999999999999999999999988 66656555554433 2356888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|++. +.++||++||. .+
T Consensus 64 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~-~~ 140 (242)
T TIGR01829 64 SCKAAVAKVEAELGPIDVLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSV-NG 140 (242)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcch-hh
Confidence 999999999999999999999999876 3667888999999999999999999999999999876 46899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..+.+++..|+++|++++.|++++++|+.+.||++++++||++.|++..
T Consensus 141 ~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~ 189 (242)
T TIGR01829 141 QKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM 189 (242)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc
Confidence 6777888999999999999999999999989999999999999999764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=246.10 Aligned_cols=187 Identities=23% Similarity=0.355 Sum_probs=166.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|+.|++.+|+.+++++..+++ +.++.++.+|+++.+
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~~ 65 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL--------------------GERVKIFPANLSDRD 65 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEccCCCHH
Confidence 589999999999999999999999999999999988776554332 235778899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|++|||||... ..++.+.+.+++++++++|+.+++.+++++.+.|.++ +.++||++||. ++
T Consensus 66 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~ 142 (245)
T PRK12936 66 EVKALGQKAEADLEGVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-RYGRIINITSV-VG 142 (245)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-CCCEEEEECCH-Hh
Confidence 999999999999999999999999876 3667788899999999999999999999999988765 46899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
..+.++...|+++|+|+.++++.++.++.+.||++++|+||+++|++...
T Consensus 143 ~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~ 192 (245)
T PRK12936 143 VTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK 192 (245)
T ss_pred CcCCCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence 67778889999999999999999999999899999999999999987543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=274.45 Aligned_cols=216 Identities=20% Similarity=0.272 Sum_probs=185.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++|||||+|||++++++|+++|++|++++|+++++++..+++.. .+.++.++.+|++|.
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~ 432 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA-----------------KGGTAHAYTCDLTDS 432 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCH
Confidence 369999999999999999999999999999999999988888777755 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF--TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~--~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
++++++++++.+++|++|++|||||+.. ...+.+. +.+++++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 433 ~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~ 510 (657)
T PRK07201 433 AAVDHTVKDILAEHGHVDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSSI 510 (657)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECCh
Confidence 9999999999999999999999999864 2333322 358899999999999999999999999877 47899999997
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++..+.++...|++||+++++|+++|+.|+.+.||+|++|+||+|+|++...... .......+|+++|+.++..
T Consensus 511 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----~~~~~~~~~~~~a~~i~~~ 584 (657)
T PRK07201 511 -GVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----YNNVPTISPEEAADMVVRA 584 (657)
T ss_pred -hhcCCCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----ccCCCCCCHHHHHHHHHHH
Confidence 5777788889999999999999999999999999999999999999998653211 1122345899999999987
Q ss_pred hhh
Q 019009 249 IRV 251 (347)
Q Consensus 249 ~~~ 251 (347)
+..
T Consensus 585 ~~~ 587 (657)
T PRK07201 585 IVE 587 (657)
T ss_pred HHh
Confidence 643
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=248.09 Aligned_cols=190 Identities=25% Similarity=0.346 Sum_probs=170.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+.++++|+++|++ |++++|+++++++..+++.+ .+.++.++.+|+++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~ 67 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA-----------------LGAKAVFVQADLSD 67 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEEccCCC
Confidence 3599999999999999999999999998 99999998887776666643 34578889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++.++++.+.++++++|++|||||... ..++.+.+.++++.++++|+.+++.++++++|.|.++...++||++||.
T Consensus 68 ~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~- 145 (260)
T PRK06198 68 VEDCRRVVAAADEAFGRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSM- 145 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCc-
Confidence 99999999999999999999999999876 4677788999999999999999999999999999876446899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
++..+.++...|+++|+++++|+++++.|+...||+|++|+||++.|++.
T Consensus 146 ~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~ 195 (260)
T PRK06198 146 SAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE 195 (260)
T ss_pred ccccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence 56667788899999999999999999999999999999999999999874
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=242.83 Aligned_cols=190 Identities=22% Similarity=0.326 Sum_probs=169.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.. .+.++.++.+|+++.
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 71 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA-----------------DGGEAVAFPLDVTDP 71 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCCCH
Confidence 458999999999999999999999999999999998877766655544 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.+.++++|++|||||... ..+..+.+.+++++.+++|+.+++.++++++|.|.++ ..++||++||. .
T Consensus 72 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-~~g~iv~isS~-~ 148 (274)
T PRK07775 72 DSVKSFVAQAEEALGEIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-RRGDLIFVGSD-V 148 (274)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECCh-H
Confidence 9999999999998999999999999866 4667788999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+....|+++|++++++++++++++.+.||++++|+||+++|++..
T Consensus 149 ~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~ 198 (274)
T PRK07775 149 ALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW 198 (274)
T ss_pred hcCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence 66677778899999999999999999999888999999999999998643
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=238.64 Aligned_cols=222 Identities=22% Similarity=0.207 Sum_probs=195.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+.++|||+|+|||+++|.++..+|++|.++.|+.+++++++++++-... -..+.+..+|+.|.++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~---------------~~~v~~~S~d~~~Y~~ 98 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQ---------------VEDVSYKSVDVIDYDS 98 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhc---------------cceeeEeccccccHHH
Confidence 6899999999999999999999999999999999999999998876431 1347799999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+..+++++...++.+|.+|||||...+ +-+.+.+++.++.++++|++|.++++++.+|.|++....|+|+.+||. ++.
T Consensus 99 v~~~~~~l~~~~~~~d~l~~cAG~~v~-g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~-~a~ 176 (331)
T KOG1210|consen 99 VSKVIEELRDLEGPIDNLFCCAGVAVP-GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQ-LAM 176 (331)
T ss_pred HHHHHhhhhhccCCcceEEEecCcccc-cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhh-hhh
Confidence 999999999999999999999999884 889999999999999999999999999999999998656799999998 788
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh--h--hhccCCHHHHHHHHhhh
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM--F--NIICELPETVARTLVPR 248 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~--~--~~~~~~pe~~a~~~~~~ 248 (347)
.+..++++|+++|+|+.+|+.+|++|+.++||+|....|+.+.||.+.+.....++.. . ..-...+|++|..+++.
T Consensus 177 ~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~ 256 (331)
T KOG1210|consen 177 LGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKG 256 (331)
T ss_pred cCcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhH
Confidence 8999999999999999999999999999999999999999999998766443322211 0 01124789999999987
Q ss_pred hhh
Q 019009 249 IRV 251 (347)
Q Consensus 249 ~~~ 251 (347)
+..
T Consensus 257 ~~r 259 (331)
T KOG1210|consen 257 MKR 259 (331)
T ss_pred Hhh
Confidence 764
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-31 Score=237.69 Aligned_cols=191 Identities=24% Similarity=0.371 Sum_probs=167.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++++|||+++|||+++++.|+++|++|++++|+++++++..+++.. .+.++.++.+|+++.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 66 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGA-----------------LGTEVRGYAANVTDE 66 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcCCCCH
Confidence 468999999999999999999999999999999999888877777755 345788899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCC--------C-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------L-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~-~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
++++++++.+.+.++++|++|||||.... .. + .+.+.++++.++++|+.+++.+++.++|.|.++...++
T Consensus 67 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~ 145 (253)
T PRK08217 67 EDVEATFAQIAEDFGQLNGLINNAGILRD-GLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGV 145 (253)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCccCc-CcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeE
Confidence 99999999998888999999999997542 21 1 56788999999999999999999999999987645678
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
||++||. +..+.++...|++||+|+++++++|+.|+.+.||++++|+||+++|++...
T Consensus 146 iv~~ss~--~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~ 203 (253)
T PRK08217 146 IINISSI--ARAGNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA 203 (253)
T ss_pred EEEEccc--cccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence 9999876 345667889999999999999999999999899999999999999998644
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-31 Score=238.80 Aligned_cols=219 Identities=25% Similarity=0.366 Sum_probs=184.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++++|||||++|||+++++.|+++|++|++++|++++.++..+++.. .+.++.++.+|++|.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~ 63 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD-----------------HGGEALVVPTDVSDAE 63 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCHH
Confidence 47899999999999999999999999999999998887777666654 3456888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCC-CHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF-TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~-~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++.++++.+.++++++|++|||||... ..++.+. +.+++++.+++|+.+++.+++.++|+|.+. .++||++||. .
T Consensus 64 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~-~ 139 (263)
T PRK06181 64 ACERLIEAAVARFGGIDILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSL-A 139 (263)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecc-c
Confidence 999999999999999999999999876 4667777 899999999999999999999999999764 5799999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh-----hhhhccCCHHHHHHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-----MFNIICELPETVARTL 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~pe~~a~~~ 245 (347)
+..+.+++..|+++|++++.++++++.++.+.||++++|.||++.|++........... .......+|+++++.+
T Consensus 140 ~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i 219 (263)
T PRK06181 140 GLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAI 219 (263)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHH
Confidence 66777888999999999999999999999999999999999999999865322111000 0001235799999999
Q ss_pred hhhhhh
Q 019009 246 VPRIRV 251 (347)
Q Consensus 246 ~~~~~~ 251 (347)
+..+..
T Consensus 220 ~~~~~~ 225 (263)
T PRK06181 220 LPAIAR 225 (263)
T ss_pred HHHhhC
Confidence 877753
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-31 Score=242.09 Aligned_cols=186 Identities=25% Similarity=0.423 Sum_probs=165.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.|++|||||++|||++++++|+++|++|++++|+++.+++..++ .+.++.++.+|++|.+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~D~~~~~ 61 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR--------------------YGDRLWVLQLDVTDSA 61 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------------------ccCceEEEEccCCCHH
Confidence 47999999999999999999999999999999998765543332 1236788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+.++++|+||||||... ..+..+.+.+++++.+++|+.+++.++++++|+|+++ +.++||++||. ++
T Consensus 62 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~ 138 (276)
T PRK06482 62 AVRAVVDRAFAALGRIDVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSE-GG 138 (276)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCc-cc
Confidence 999999999999999999999999876 4677788899999999999999999999999999876 46899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..+.|+...|++||++++.|+++++.|+.+.||+++.++||.+.|++..
T Consensus 139 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~ 187 (276)
T PRK06482 139 QIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGA 187 (276)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcc
Confidence 6677888999999999999999999999999999999999999998743
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=241.47 Aligned_cols=190 Identities=31% Similarity=0.461 Sum_probs=162.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH--HHHHHHHHHHHhhhhhhhcCCCCcccccC-ceeeEEecC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVH-AKVAGIACD 86 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D 86 (347)
..+|+++||||++|||+++|+.|+++|++|++++|+.+. .+...+... . .+ ..+.+..+|
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~~~~~~D 65 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E----------------AGGGRAAAVAAD 65 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h----------------cCCCcEEEEEec
Confidence 346999999999999999999999999999999888765 333333322 0 12 367788899
Q ss_pred CCC-HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 87 VCE-PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 87 ls~-~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
+++ .++++.+++.+.+.+|++|++|||||+.....++.+.+.+++++++++|+.+++.+++.+.|.|++ + +||++
T Consensus 66 vs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~--~Iv~i 141 (251)
T COG1028 66 VSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK--Q--RIVNI 141 (251)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh--C--eEEEE
Confidence 998 999999999999999999999999999762147889999999999999999999999988888883 2 99999
Q ss_pred cCCCCCCCCCCC-cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 166 DGAGSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 166 sS~~~~~~~~~~-~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
||. .+. ..++ +..|++||+|+.+|+++|+.|+.++||+|++|+||++.|++....
T Consensus 142 sS~-~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~ 197 (251)
T COG1028 142 SSV-AGL-GGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAAL 197 (251)
T ss_pred CCc-hhc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhh
Confidence 998 555 6666 499999999999999999999999999999999999999987543
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-31 Score=236.47 Aligned_cols=188 Identities=25% Similarity=0.389 Sum_probs=165.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+ .+.++..+.+|++|.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 67 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA-----------------DGGTAIAVQVDVSDP 67 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCCH
Confidence 358999999999999999999999999999999998877776666654 234577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG--FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~--~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
++++++++++.++++++|+||||||+... ..++.+.+.+++++++++|+.+++.++++++|.|.+. +.++||++||.
T Consensus 68 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~ 146 (250)
T PRK07774 68 DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-GGGAIVNQSST 146 (250)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-CCcEEEEEecc
Confidence 99999999999999999999999998531 2456788899999999999999999999999999876 47899999986
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++. +....|++||++++.+++++++|+.+.||++++|+||.++|++..
T Consensus 147 -~~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 194 (250)
T PRK07774 147 -AAW---LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATR 194 (250)
T ss_pred -ccc---CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccc
Confidence 333 345789999999999999999999989999999999999999854
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-31 Score=239.42 Aligned_cols=188 Identities=22% Similarity=0.294 Sum_probs=160.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||+++|++|+++|++|++++|++ +.+++ +.+. .+.++.++.+|+++.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~~~----------------~~~~~~~~~~D~~~~ 60 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK----LAEQ----------------YNSNLTFHSLDLQDV 60 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH----HHhc----------------cCCceEEEEecCCCH
Confidence 37999999999999999999999999999999987 33322 2111 234678899999999
Q ss_pred HHHHHHHHHHHhhcCC--cc--EEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGS--ID--IWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~--iD--~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++++++++++.+.++. ++ ++|||||...+..++.+.+.+++++.+++|+.+++.+++.++|+|++.+..++||++|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 140 (251)
T PRK06924 61 HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINIS 140 (251)
T ss_pred HHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEec
Confidence 9999999998877653 22 8999999865456788999999999999999999999999999998754467999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccc
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~ 220 (347)
|. .+..+.+.+..|+++|+|+++|++.|+.|++ +.||+|++|+||+++|++..
T Consensus 141 S~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~ 195 (251)
T PRK06924 141 SG-AAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA 195 (251)
T ss_pred ch-hhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH
Confidence 87 6777888899999999999999999999975 56899999999999999854
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=272.95 Aligned_cols=189 Identities=24% Similarity=0.325 Sum_probs=169.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. ...++..+.+|++|.
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~---------------~~~~~~~v~~Dvtd~ 477 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF---------------GAGRAVALKMDVTDE 477 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhc---------------CCCcEEEEECCCCCH
Confidence 46999999999999999999999999999999999988877777665421 123577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|+..+++|+.+++.+++.++|.|++++.+++||++||. .
T Consensus 478 ~~v~~a~~~i~~~~g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~-~ 555 (676)
T TIGR02632 478 QAVKAAFADVALAYGGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASK-N 555 (676)
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCh-h
Confidence 9999999999999999999999999865 4778888999999999999999999999999999876446899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccC
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T 216 (347)
+..+.++...|++||+++++++++++.|+.+.||+||+|+||.|.|
T Consensus 556 a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~ 601 (676)
T TIGR02632 556 AVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ 601 (676)
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence 6777888899999999999999999999999999999999999965
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-32 Score=225.29 Aligned_cols=196 Identities=21% Similarity=0.251 Sum_probs=174.2
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
++-+|-+.+|||+.+|+|++.|+.|+.+|+.|++.+-...+.++..+++ +.++.+.++|+
T Consensus 5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel--------------------g~~~vf~padv 64 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL--------------------GGKVVFTPADV 64 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh--------------------CCceEEecccc
Confidence 3446789999999999999999999999999999999888888777775 56899999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-----
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----- 157 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~----- 157 (347)
+++++++.++.....+||++|.+|||||+... ...-...+.|++++++++|++|+|++++.....|-+..
T Consensus 65 tsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~g 144 (260)
T KOG1199|consen 65 TSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNG 144 (260)
T ss_pred CcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCC
Confidence 99999999999999999999999999998542 22334678899999999999999999999999997542
Q ss_pred CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcc
Q 019009 158 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 224 (347)
Q Consensus 158 ~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~ 224 (347)
..|.|||..|. +...+.-++.+|++||.++.+|+--++++++..|||+++|.||.++||++...+.
T Consensus 145 qrgviintasv-aafdgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpe 210 (260)
T KOG1199|consen 145 QRGVIINTASV-AAFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPE 210 (260)
T ss_pred cceEEEeecee-eeecCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhH
Confidence 36899999988 6788888999999999999999999999999999999999999999999865543
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=235.89 Aligned_cols=191 Identities=24% Similarity=0.335 Sum_probs=165.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.|+++||||++|||.++|+.|+++|++|++++|+. +..++..++++. .+.++.++.+|++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 64 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-----------------LGVEVIFFPADVADL 64 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-----------------cCCceEEEEecCCCH
Confidence 37999999999999999999999999999999874 344444455433 235688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-----CcEEEE
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-----GGHIFN 164 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-----~g~Iv~ 164 (347)
+++.++++.+.+.++++|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++++++.|.++.. .++||+
T Consensus 65 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~ 144 (256)
T PRK12745 65 SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVF 144 (256)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEE
Confidence 99999999999999999999999998531 356778899999999999999999999999999987632 357999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+||. .+..+.+....|++||++++.++++++.|+.++||+|++|+||++.|++..
T Consensus 145 ~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~ 199 (256)
T PRK12745 145 VSSV-NAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA 199 (256)
T ss_pred ECCh-hhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc
Confidence 9987 566677788899999999999999999999989999999999999998754
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=232.40 Aligned_cols=191 Identities=28% Similarity=0.430 Sum_probs=171.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++++.|+++|++|+++ +|++++.++..+++.. .+.++.++.+|++|
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~ 66 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE-----------------EGGDAIAVKADVSS 66 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCCC
Confidence 35899999999999999999999999999999 9998887776666654 23568889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++.+.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.+++|++||.
T Consensus 67 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~- 143 (247)
T PRK05565 67 EEDVENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-KSGVIVNISSI- 143 (247)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCH-
Confidence 99999999999999999999999999875 4677888999999999999999999999999999876 47899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
.+..+.+....|+.+|++++.++++++.++...||++++|+||+++|++...
T Consensus 144 ~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~ 195 (247)
T PRK05565 144 WGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS 195 (247)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc
Confidence 5666777888999999999999999999998899999999999999987654
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-30 Score=231.99 Aligned_cols=191 Identities=23% Similarity=0.310 Sum_probs=166.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||++++++|+++|++|++ ..|++++.++...+++. .+.++..+.+|++|.
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~d~ 63 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQ-----------------AGGKAFVLQADISDE 63 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------CCCeEEEEEccCCCH
Confidence 379999999999999999999999999987 46887777777666654 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vsS~ 168 (347)
++++++++.+.++++++|++|||||......++.+.+.++++.++++|+.+++.+++++++.|.++. ++|+||++||.
T Consensus 64 ~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~ 143 (247)
T PRK09730 64 NQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSA 143 (247)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 9999999999999999999999999864356678889999999999999999999999999997652 35789999987
Q ss_pred CCCCCCCCC-cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~-~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.+..+.|+ +..|+++|++++.++++++.|+.+.||++++|+||++.|++..
T Consensus 144 -~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~ 195 (247)
T PRK09730 144 -ASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA 195 (247)
T ss_pred -hhccCCCCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence 45555554 4689999999999999999999989999999999999999754
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-31 Score=223.55 Aligned_cols=163 Identities=33% Similarity=0.521 Sum_probs=151.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC--hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~--~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
|+++||||++|||+++|++|+++|+ +|++++|+ .+..++..++++. .+.++.++++|+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~-----------------~~~~~~~~~~D~~~ 63 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKA-----------------PGAKITFIECDLSD 63 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHH-----------------TTSEEEEEESETTS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccc-----------------cccccccccccccc
Confidence 7899999999999999999999965 78999999 6777777777775 45789999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|++|||||... ..++.+.+.|++++++++|+.+++.+.++++| + ++|+||++||.
T Consensus 64 ~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~-~~g~iv~~sS~- 136 (167)
T PF00106_consen 64 PESIRALIEEVIKRFGPLDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----Q-GGGKIVNISSI- 136 (167)
T ss_dssp HHHHHHHHHHHHHHHSSESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----H-TTEEEEEEEEG-
T ss_pred ccccccccccccccccccccccccccccc-ccccccccchhhhhccccccceeeeeeehhee----c-cccceEEecch-
Confidence 99999999999999999999999999988 68899999999999999999999999999999 2 48999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKES 199 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el 199 (347)
++..+.|++..|++||+|+++|+++|++|+
T Consensus 137 ~~~~~~~~~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 137 AGVRGSPGMSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp GGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999999999996
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-31 Score=239.33 Aligned_cols=186 Identities=25% Similarity=0.355 Sum_probs=164.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+++++++..+++. +.++..+.+|++|.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~D~~~~~ 62 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-------------------DARFVPVACDLTDAA 62 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------------------CCceEEEEecCCCHH
Confidence 5899999999999999999999999999999999888776665552 235788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++++.++++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+.+++++.|+++ +.++||++||. .+
T Consensus 63 ~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~~ 139 (257)
T PRK07074 63 SLAAALANAAAERGPVDVLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-SRGAVVNIGSV-NG 139 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEcch-hh
Confidence 999999999999999999999999876 3567788999999999999999999999999999876 46899999986 33
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.. ..+...|+++|+++++++++++.|+.++||+|++++||++.|++..
T Consensus 140 ~~-~~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~ 187 (257)
T PRK07074 140 MA-ALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE 187 (257)
T ss_pred cC-CCCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence 32 3456789999999999999999999999999999999999998753
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-30 Score=233.29 Aligned_cols=188 Identities=24% Similarity=0.335 Sum_probs=165.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||+++|++|+++|++|++. .|+.+++++..+++.. .+.++.++.+|++|.
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~d~ 68 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIES-----------------NGGKAFLIEADLNSI 68 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCcCCH
Confidence 5899999999999999999999999999775 7888777766666643 234678899999999
Q ss_pred HHHHHHHHHHHhhc------CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 91 ADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 91 ~~v~~~~~~i~~~~------g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
+++.++++++.+++ +++|++|||||... ..++.+.+.+.++.++++|+.+++++++.++|.|.+ .+++|+
T Consensus 69 ~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~ 144 (254)
T PRK12746 69 DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVIN 144 (254)
T ss_pred HHHHHHHHHHHHHhccccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEE
Confidence 99999999998877 47999999999876 467788899999999999999999999999999964 368999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+||. .+..+.+++..|++||++++.++++++.|+.+.||+|++++||++.|++...
T Consensus 145 ~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~ 200 (254)
T PRK12746 145 ISSA-EVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK 200 (254)
T ss_pred ECCH-HhcCCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh
Confidence 9987 5667788889999999999999999999999899999999999999998643
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=230.51 Aligned_cols=190 Identities=26% Similarity=0.398 Sum_probs=164.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+|+++||||++|||+++|+.|+++|++|++++|. .+..++..+++.. .+.++.++.+|+
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl 68 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA-----------------AGGKALGLAFDV 68 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh-----------------cCCcEEEEEccC
Confidence 5899999999999999999999999999997664 3444444444433 345788999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHH-HHhHcCCCCcEEEEEc
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAM-RVMRDQPKGGHIFNMD 166 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~l-p~l~~~~~~g~Iv~vs 166 (347)
+|.++++++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++++. |.|+++ ..++||++|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~~s 146 (249)
T PRK12827 69 RDFAATRAALDAGVEEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRIVNIA 146 (249)
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEEEEEC
Confidence 9999999999999999899999999999876 4678889999999999999999999999999 666554 468999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
|. ++..+.+++..|+++|++++.++++++.|+.+.||++++|+||+++|++...
T Consensus 147 S~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~ 200 (249)
T PRK12827 147 SV-AGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN 200 (249)
T ss_pred Cc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence 87 5666777888999999999999999999999889999999999999997644
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=227.95 Aligned_cols=187 Identities=20% Similarity=0.293 Sum_probs=159.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++||||++|||+++|+.|+++ ++|++++|++. .++||++|.+++
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------------------~~~~D~~~~~~~ 46 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------------------DVQVDITDPASI 46 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------------------ceEecCCChHHH
Confidence 6999999999999999999999 99999998642 257999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
++++++ ++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++ .++|+++||. .+..
T Consensus 47 ~~~~~~----~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~-~~~~ 117 (199)
T PRK07578 47 RALFEK----VGKVDAVVSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGI-LSDE 117 (199)
T ss_pred HHHHHh----cCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEccc-ccCC
Confidence 998765 478999999999865 477888999999999999999999999999999974 4789999987 5677
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+.+++..|+++|+|+++|+++|+.|+ ++||+||+|+||+++|++..... .+......+|+++|+.++..+.
T Consensus 118 ~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~a~~~~~~~~ 188 (199)
T PRK07578 118 PIPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGP-----FFPGFEPVPAARVALAYVRSVE 188 (199)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhh-----cCCCCCCCCHHHHHHHHHHHhc
Confidence 78899999999999999999999999 88999999999999998742211 0111223578999988776554
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=234.96 Aligned_cols=204 Identities=22% Similarity=0.196 Sum_probs=159.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
++++||||++|||+++|++|+++| ..|++..|+.... . ...++.++++|+++.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~-------------------~~~~~~~~~~Dls~~ 55 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F-------------------QHDNVQWHALDVTDE 55 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c-------------------ccCceEEEEecCCCH
Confidence 479999999999999999999986 5666667654321 0 124678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
++++++. ++++++|+||||||.... ..++.+.+.+.+++.+++|+.+++.+++.++|.|+++ +.++|+++
T Consensus 56 ~~~~~~~----~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~~~i~~i 130 (235)
T PRK09009 56 AEIKQLS----EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-ESAKFAVI 130 (235)
T ss_pred HHHHHHH----HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-CCceEEEE
Confidence 9988854 456899999999998641 2456788999999999999999999999999999876 46799999
Q ss_pred cCCCCC--CCCCCCcchhhhHHHHHHHHHHHHHhHhcC--CCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH
Q 019009 166 DGAGSG--GSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 166 sS~~~~--~~~~~~~~~Y~asKaal~~~~~~La~el~~--~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
||..+. ..+.+++..|+++|+++++|+++|+.|+.+ .+|+|++|+||+++|++..+.... .......+||++
T Consensus 131 ss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~ 206 (235)
T PRK09009 131 SAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQN----VPKGKLFTPEYV 206 (235)
T ss_pred eecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhc----cccCCCCCHHHH
Confidence 875221 223466789999999999999999999986 699999999999999986432211 111112478888
Q ss_pred HHHHhhhhh
Q 019009 242 ARTLVPRIR 250 (347)
Q Consensus 242 a~~~~~~~~ 250 (347)
|+.++..+.
T Consensus 207 a~~~~~l~~ 215 (235)
T PRK09009 207 AQCLLGIIA 215 (235)
T ss_pred HHHHHHHHH
Confidence 888875554
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-30 Score=230.62 Aligned_cols=216 Identities=27% Similarity=0.397 Sum_probs=175.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|++|||||++|||++++++|+++|++|++..|+ .+...+..+.+.+ .+.++..+.+|+++.
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 68 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-----------------NGGEGIGVLADVSTR 68 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-----------------cCCeeEEEEeccCCH
Confidence 5899999999999999999999999999887764 4444444444443 334677889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.+.++++|++|||||... ..++.+.+.+.++..+++|+.+++.+++++.|+|++ .++||++||. +
T Consensus 69 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~-~ 143 (252)
T PRK06077 69 EGCETLAKATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASV-A 143 (252)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcch-h
Confidence 9999999999999999999999999866 467778889999999999999999999999999974 4799999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc---hhhhhh-----hccCCHHHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ---NKQMFN-----IICELPETVA 242 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~---~~~~~~-----~~~~~pe~~a 242 (347)
+..+.++...|++||++++++++++++|+.+ +|+++.|.||++.|++........ .+.... .....|+++|
T Consensus 144 ~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 222 (252)
T PRK06077 144 GIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVA 222 (252)
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHH
Confidence 7778888999999999999999999999988 899999999999999753321100 000000 0124677777
Q ss_pred HHHhhhhh
Q 019009 243 RTLVPRIR 250 (347)
Q Consensus 243 ~~~~~~~~ 250 (347)
+.++..+.
T Consensus 223 ~~~~~~~~ 230 (252)
T PRK06077 223 EFVAAILK 230 (252)
T ss_pred HHHHHHhC
Confidence 77765554
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=228.82 Aligned_cols=215 Identities=26% Similarity=0.412 Sum_probs=183.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||+++||++++++|+++|++|++++|+++++++..+++.+ . .++.++.+|+++.+
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~-~~~~~~~~D~~~~~ 67 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN-----------------K-GNVLGLAADVRDEA 67 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc-----------------c-CcEEEEEccCCCHH
Confidence 58999999999999999999999999999999999888777766643 1 46788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++.+.+.++++|++|||+|... ..++.+.+.+++++++++|+.+++.+++++++.|.+ ..++||++||. ++
T Consensus 68 ~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~iv~~ss~-~~ 143 (237)
T PRK07326 68 DVQRAVDAIVAAFGGLDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR--GGGYIINISSL-AG 143 (237)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH--CCeEEEEECCh-hh
Confidence 999999999999999999999999865 467788999999999999999999999999999943 36899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.+....|+++|+++.++++.++.|+...|+++++|+||++.|++........ .....+++++++.++..+..
T Consensus 144 ~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----~~~~~~~~d~a~~~~~~l~~ 218 (237)
T PRK07326 144 TNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----DAWKIQPEDIAQLVLDLLKM 218 (237)
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----hhccCCHHHHHHHHHHHHhC
Confidence 6677778899999999999999999999989999999999999998754332110 01124789999988877765
Q ss_pred cc
Q 019009 252 VK 253 (347)
Q Consensus 252 ~~ 253 (347)
+.
T Consensus 219 ~~ 220 (237)
T PRK07326 219 PP 220 (237)
T ss_pred Cc
Confidence 53
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=233.31 Aligned_cols=183 Identities=22% Similarity=0.296 Sum_probs=158.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++++||||++|||++++++|+++|++|++++|+.++. . ... .+.++.++++|++|.++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~-----------------~~~~~~~~~~D~~~~~~ 59 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAA-----------------AGERLAEVELDLSDAAA 59 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhc-----------------cCCeEEEEEeccCCHHH
Confidence 5799999999999999999999999999999986531 1 111 23568889999999999
Q ss_pred HHHHHHH-HHhhc---CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 93 VQKLSNF-AVNEF---GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 93 v~~~~~~-i~~~~---g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++++++ +.+.+ +++|++|||||...+..++.+.+.+++++.+++|+.+++.+++.++|.|.++ ..++||++||.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~ 138 (243)
T PRK07023 60 AAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-AERRILHISSG 138 (243)
T ss_pred HHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-CCCEEEEEeCh
Confidence 9998776 55544 4799999999986544677788999999999999999999999999999876 47899999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++..+.+++..|+++|++++++++.++.| .+.||++++|+||+++|++..
T Consensus 139 -~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~ 188 (243)
T PRK07023 139 -AARNAYAGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA 188 (243)
T ss_pred -hhcCCCCCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence 67778888999999999999999999999 778999999999999999753
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=257.92 Aligned_cols=186 Identities=20% Similarity=0.320 Sum_probs=161.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||++|||+++|+.|+++|++|++++|.. +++++..++ . ....+.+|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~--------------------~--~~~~~~~Dv~ 266 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR--------------------V--GGTALALDIT 266 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH--------------------c--CCeEEEEeCC
Confidence 479999999999999999999999999999998853 222222211 1 2346789999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++.+.++++++|++|||||+.. ..++.+.+.++|+.++++|+.+++.++++++|.+..+ ++++||++||.
T Consensus 267 ~~~~~~~~~~~~~~~~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~g~iv~~SS~ 344 (450)
T PRK08261 267 APDAPARIAEHLAERHGGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-DGGRIVGVSSI 344 (450)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-CCCEEEEECCh
Confidence 999999999999999999999999999876 4778889999999999999999999999999976544 46899999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
++..+.+++..|+++|+++++|+++++.|+.+.||++|+|+||+++|++...
T Consensus 345 -~~~~g~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~ 396 (450)
T PRK08261 345 -SGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA 396 (450)
T ss_pred -hhcCCCCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc
Confidence 5667788899999999999999999999999999999999999999987643
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=227.99 Aligned_cols=205 Identities=23% Similarity=0.262 Sum_probs=167.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|++++.++. ++ . .++.++.+|++|.+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~-----------------~-~~~~~~~~D~~d~~ 58 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL----QA-----------------L-PGVHIEKLDMNDPA 58 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH----Hh-----------------c-cccceEEcCCCCHH
Confidence 37999999999999999999999999999999998765432 11 1 24567789999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++++++.+.+ +++|++|||||+..+ ..++.+.+.+++++.+++|+.+++.++++++|+|++. .++|+++||. .
T Consensus 59 ~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~-~ 133 (225)
T PRK08177 59 SLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQ-L 133 (225)
T ss_pred HHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccC-c
Confidence 99999998854 479999999998642 2456788999999999999999999999999999753 4789999886 3
Q ss_pred CCC---CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 171 GGS---STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 171 ~~~---~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
+.. +...+..|+++|++++.|+++|+.|+.++||+||+|+||+++|++..... ..++++.++.++.
T Consensus 134 g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~-----------~~~~~~~~~~~~~ 202 (225)
T PRK08177 134 GSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNA-----------PLDVETSVKGLVE 202 (225)
T ss_pred cccccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCC-----------CCCHHHHHHHHHH
Confidence 332 22356789999999999999999999999999999999999999854321 1356777777777
Q ss_pred hhhhccc
Q 019009 248 RIRVVKG 254 (347)
Q Consensus 248 ~~~~~~~ 254 (347)
.+.....
T Consensus 203 ~~~~~~~ 209 (225)
T PRK08177 203 QIEAASG 209 (225)
T ss_pred HHHhCCc
Confidence 7665543
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=235.02 Aligned_cols=182 Identities=23% Similarity=0.326 Sum_probs=157.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||+++++.|+++|++|++++|+++++++..++. ...++.+|+++.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~~~~ 65 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET----------------------GCEPLRLDVGDD 65 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------------CCeEEEecCCCH
Confidence 4689999999999999999999999999999999987665433221 245678999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++. ++++|++|||||... ..+..+.+.+++++.+++|+.+++.+++++++.+++++..++||++||. +
T Consensus 66 ~~v~~~~~~----~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~-~ 139 (245)
T PRK07060 66 AAIRAALAA----AGAFDGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQ-A 139 (245)
T ss_pred HHHHHHHHH----hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccH-H
Confidence 988887765 478999999999876 4667778999999999999999999999999999865335899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+....|+++|++++.++++++.++.+.||++++|+||++.|++..
T Consensus 140 ~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 189 (245)
T PRK07060 140 ALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA 189 (245)
T ss_pred HcCCCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence 66777888999999999999999999999988999999999999999753
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=226.93 Aligned_cols=191 Identities=25% Similarity=0.372 Sum_probs=171.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||+++||++++++|+++|++|++++|+.++++...+++.+ .+.++.++.+|++|.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~ 67 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEA-----------------AGGKARARQVDVRDR 67 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCCCH
Confidence 468999999999999999999999999999999998887777776654 334688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|++|||+|... ..++.+.+.++++..+++|+.+++.+++.++|.|.++ +.++||++||. .
T Consensus 68 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~ss~-~ 144 (251)
T PRK12826 68 AALKAAVAAGVEDFGRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-GGGRIVLTSSV-A 144 (251)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEech-H
Confidence 9999999999999999999999999876 4677788999999999999999999999999999876 46899999987 4
Q ss_pred CC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+. .+.++...|+++|++++.+++.++.++.+.|++++.|+||.+.|+....
T Consensus 145 ~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~ 196 (251)
T PRK12826 145 GPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGN 196 (251)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhh
Confidence 44 6778888999999999999999999998889999999999999997543
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=233.12 Aligned_cols=177 Identities=19% Similarity=0.222 Sum_probs=156.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+.++. . ...++.+|++|.+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~--~~~~~~~D~~~~~ 54 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------------------------F--PGELFACDLADIE 54 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------------------------c--CceEEEeeCCCHH
Confidence 58999999999999999999999999999999986530 1 1135789999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+.+ ++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|++. +.++||++||. +
T Consensus 55 ~~~~~~~~~~~~~-~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~- 129 (234)
T PRK07577 55 QTAATLAQINEIH-PVDAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNICSR-A- 129 (234)
T ss_pred HHHHHHHHHHHhC-CCcEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEccc-c-
Confidence 9999999998876 6899999999876 4677788999999999999999999999999999876 46899999986 3
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
..+.+....|++||+++++|+++++.|+++.||+|++|+||++.|++...
T Consensus 130 ~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~ 179 (234)
T PRK07577 130 IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ 179 (234)
T ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence 34567788999999999999999999999999999999999999998643
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-29 Score=222.55 Aligned_cols=191 Identities=28% Similarity=0.440 Sum_probs=167.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||++++++|+++|++|+++.|+.+ ..+...++++. .+.++..+.+|+++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~ 66 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGA-----------------LGGKALAVQGDVSD 66 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-----------------cCCceEEEEcCCCC
Confidence 4589999999999999999999999999988888765 34455555543 34578889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++++.++++++|++|||||... ..+..+.+.+++++++++|+.+++.+.++++|.+.+. +.+++|++||.
T Consensus 67 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~iss~- 143 (248)
T PRK05557 67 AESVERAVDEAKAEFGGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-RSGRIINISSV- 143 (248)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEccc-
Confidence 99999999999999999999999999876 3667788999999999999999999999999999876 46799999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
++..+.++...|+++|++++.+++++++++...||++++|+||+++|++...
T Consensus 144 ~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~ 195 (248)
T PRK05557 144 VGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA 195 (248)
T ss_pred ccCcCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence 5667778889999999999999999999999889999999999999987543
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=228.72 Aligned_cols=183 Identities=20% Similarity=0.275 Sum_probs=160.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||++++++|+++|++|++++|+++.+++..+.... .+.++.++.+|++|.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~ 64 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR-----------------RGLALRVEKLDLTDAI 64 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcceEEEeeCCCHH
Confidence 58999999999999999999999999999999998776665554433 3346788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ +++|+||||||... ..++.+.+.++++..+++|+.+++.+++.++|.|++. +.++||++||. .+
T Consensus 65 ~~~~~~~------~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~-~~ 135 (257)
T PRK09291 65 DRAQAAE------WDVDVLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSM-AG 135 (257)
T ss_pred HHHHHhc------CCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcCh-hh
Confidence 8887653 37999999999876 4788899999999999999999999999999999877 35899999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..+.++...|++||++++.+++.++.|+.+.||++++|+||++.|++..
T Consensus 136 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~ 184 (257)
T PRK09291 136 LITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND 184 (257)
T ss_pred ccCCCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence 6667788899999999999999999999989999999999999998753
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-29 Score=224.66 Aligned_cols=188 Identities=26% Similarity=0.391 Sum_probs=168.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||+++||+++++.|+++|++|++++|+.+..++..+++.. .+.++..+.+|++|.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~ 63 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATD-----------------AGGSVIYLVADVTKED 63 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEECCCCCHH
Confidence 47999999999999999999999999999999998887777666644 3356888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+.++++|++|||||... ..+..+.+.+++++++++|+.+++.+++.++|.|++. +.+++|++||. ++
T Consensus 64 ~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss~-~~ 140 (255)
T TIGR01963 64 EIADMIAAAAAEFGGLDILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIASA-HG 140 (255)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcch-hh
Confidence 999999999998899999999999865 3566678899999999999999999999999999876 46799999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
..+.+.+..|+++|++++.+++.++.++.+.+|+|+.|+||++.|++.
T Consensus 141 ~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~ 188 (255)
T TIGR01963 141 LVASPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV 188 (255)
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence 677788899999999999999999999988899999999999999874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=261.55 Aligned_cols=190 Identities=27% Similarity=0.375 Sum_probs=171.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++++.|+++|++|++++|+.+++++..+++.. . .++.++.+|++|.
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~-----------------~-~~v~~v~~Dvtd~ 482 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG-----------------P-DRALGVACDVTDE 482 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc-----------------c-CcEEEEEecCCCH
Confidence 469999999999999999999999999999999999888776666543 1 3678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.+|++|++|||||+.. ..++.+.+.++|+.++++|+.|++.++++++|.|++++.+|+||++||. .
T Consensus 483 ~~v~~~~~~~~~~~g~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~-~ 560 (681)
T PRK08324 483 AAVQAAFEEAALAFGGVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASK-N 560 (681)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCc-c
Confidence 9999999999999999999999999876 4788889999999999999999999999999999987445899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc--cCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV--LTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v--~T~~~~ 220 (347)
+..+.++...|++||++++.++++++.|+.+.||+||+|+||.+ .|++..
T Consensus 561 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~ 612 (681)
T PRK08324 561 AVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT 612 (681)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc
Confidence 66777888999999999999999999999999999999999999 887654
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-29 Score=221.43 Aligned_cols=214 Identities=17% Similarity=0.232 Sum_probs=178.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||+++||++++++|+++|++|++++|++++..+..+++.. ..+..+.+|++|.
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------------------~~~~~~~~D~~~~ 66 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-------------------DALRIGGIDLVDP 66 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-------------------cCceEEEeecCCH
Confidence 369999999999999999999999999999999998877666665543 2355678999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++||++||. .
T Consensus 67 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~ 143 (239)
T PRK12828 67 QAARRAVDEVNRQFGRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIVNIGAG-A 143 (239)
T ss_pred HHHHHHHHHHHHHhCCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-CCCEEEEECch-H
Confidence 9999999999999999999999999865 3666778999999999999999999999999999876 47899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+....|+++|++++.+++.++.++.+.||++++|.||++.|++....... .... ....++++++.++..+.
T Consensus 144 ~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~--~~~~--~~~~~~dva~~~~~~l~ 219 (239)
T PRK12828 144 ALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD--ADFS--RWVTPEQIAAVIAFLLS 219 (239)
T ss_pred hccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc--hhhh--cCCCHHHHHHHHHHHhC
Confidence 6666778889999999999999999999988899999999999999864322111 0011 12357888877765443
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=223.10 Aligned_cols=175 Identities=26% Similarity=0.316 Sum_probs=151.9
Q ss_pred EEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHHH
Q 019009 16 FSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK 95 (347)
Q Consensus 16 lITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~ 95 (347)
+||||++|||++++++|+++|++|++++|+++++++..+++++ +.++.++.+|++|.+++.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dl~~~~~~~~ 62 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG------------------GAPVRTAALDITDEAAVDA 62 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------------------CCceEEEEccCCCHHHHHH
Confidence 6999999999999999999999999999998877666555431 2467889999999999999
Q ss_pred HHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCC
Q 019009 96 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST 175 (347)
Q Consensus 96 ~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~ 175 (347)
++++ ++++|+||||+|... ..++.+.+.+++++++++|+.+++.+++ .+.|. +.++||++||. ++..+.
T Consensus 63 ~~~~----~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~---~~g~iv~~ss~-~~~~~~ 131 (230)
T PRK07041 63 FFAE----AGPFDHVVITAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA---PGGSLTFVSGF-AAVRPS 131 (230)
T ss_pred HHHh----cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc---CCeEEEEECch-hhcCCC
Confidence 8875 478999999999876 4677888999999999999999999999 45553 36899999987 577778
Q ss_pred CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 176 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 176 ~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+....|++||+++++|+++|+.|+.+ |+|++|+||+++|++...
T Consensus 132 ~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~ 175 (230)
T PRK07041 132 ASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSK 175 (230)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHh
Confidence 88899999999999999999999975 999999999999998643
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=230.98 Aligned_cols=190 Identities=28% Similarity=0.406 Sum_probs=166.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+ .++..+.+|++|+
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------------------~~~~~~~~D~~~~ 70 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-------------------AKVTATVADVADP 70 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-------------------CceEEEEccCCCH
Confidence 459999999999999999999999999999999998776655444321 2568899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++++.+.++++|+||||||...+..+....+.+++++++++|+.+++.+++.+++.|.+.+.+++|+++||. +
T Consensus 71 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~-~ 149 (264)
T PRK12829 71 AQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSV-A 149 (264)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccc-c
Confidence 999999999999999999999999987435667788999999999999999999999999998876333788888876 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+.+..|+.+|++++.+++.++.++...+|++++|+||++.|++..
T Consensus 150 ~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~ 199 (264)
T PRK12829 150 GRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR 199 (264)
T ss_pred cccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH
Confidence 66777888899999999999999999999888999999999999998754
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=221.11 Aligned_cols=189 Identities=26% Similarity=0.421 Sum_probs=169.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||+++||+++++.|+++|++|++++|++++.+...++++. .+.++.++.+|++|.+
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~ 67 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRA-----------------AGGEARVLVFDVSDEA 67 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----------------cCCceEEEEccCCCHH
Confidence 48999999999999999999999999999999999888777666654 3467889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++++.+.++++|++|||+|... ..+..+.+.++++..+++|+.+++.+++++.|+|.+. +.++||++||. .+
T Consensus 68 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~~ss~-~~ 144 (246)
T PRK05653 68 AVRALIEAAVEAFGALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNISSV-SG 144 (246)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECcH-Hh
Confidence 999999999888999999999999876 4667788999999999999999999999999999776 45899999987 45
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..+.+....|+.+|++++.+++++++++.+.|+++++|+||.+.+++..
T Consensus 145 ~~~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 145 VTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193 (246)
T ss_pred ccCCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence 5567778899999999999999999999888999999999999998754
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=221.44 Aligned_cols=196 Identities=18% Similarity=0.139 Sum_probs=148.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++|||||+|||+++|++|+++|++|++++|+.....+ +. . . .....+.+|++|.+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~-----------------~-~~~~~~~~D~~~~~ 71 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-D-----------------E-SPNEWIKWECGKEE 71 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-c-----------------c-CCCeEEEeeCCCHH
Confidence 5999999999999999999999999999999998732111 11 0 0 11256789999998
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEcCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAG 169 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vsS~~ 169 (347)
++.+ .++++|+||||||+.. ..+.+.+++++++++|+.+++.++++++|.|++++ +++.|++.+|.
T Consensus 72 ~~~~-------~~~~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~- 139 (245)
T PRK12367 72 SLDK-------QLASLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSE- 139 (245)
T ss_pred HHHH-------hcCCCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecc-
Confidence 7764 3578999999999743 34568899999999999999999999999997631 23334444444
Q ss_pred CCCCCCCCcchhhhHHHHHHHHH---HHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQ---ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~---~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~ 246 (347)
++..+ ++...|++||+|+..+. +.|+.|+.+.||+|++++||+++|++... ...+|+++|+.++
T Consensus 140 a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~------------~~~~~~~vA~~i~ 206 (245)
T PRK12367 140 AEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPI------------GIMSADFVAKQIL 206 (245)
T ss_pred cccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCcc------------CCCCHHHHHHHHH
Confidence 34333 46678999999986544 45555667889999999999999987310 1247999999999
Q ss_pred hhhhhccc
Q 019009 247 PRIRVVKG 254 (347)
Q Consensus 247 ~~~~~~~~ 254 (347)
..+...+.
T Consensus 207 ~~~~~~~~ 214 (245)
T PRK12367 207 DQANLGLY 214 (245)
T ss_pred HHHhcCCc
Confidence 88875443
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-29 Score=224.18 Aligned_cols=182 Identities=19% Similarity=0.210 Sum_probs=151.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||++|||++++++|+++|++|++++|+.+ .++...++++. .+.++.++.+|++|.
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 68 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA-----------------AGGRASAVGADLTDE 68 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh-----------------cCCceEEEEcCCCCH
Confidence 589999999999999999999999999999999764 45555555543 234678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|++|||||... .. .. +++..+++|+.+++.+++++.|+|.+ .++||++||..+
T Consensus 69 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~ 138 (248)
T PRK07806 69 ESVAALMDTAREEFGGLDALVLNASGGM-ES---GM---DEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQA 138 (248)
T ss_pred HHHHHHHHHHHHhCCCCcEEEECCCCCC-CC---CC---CcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchh
Confidence 9999999999999999999999998643 11 11 24568899999999999999999953 468999998533
Q ss_pred CC----CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GG----SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~----~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.. .+.+.+..|++||++++.++++++.|+++.||+|++|.||++.|++..
T Consensus 139 ~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~ 192 (248)
T PRK07806 139 HFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA 192 (248)
T ss_pred hcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh
Confidence 21 234556789999999999999999999999999999999999998643
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-28 Score=219.53 Aligned_cols=216 Identities=24% Similarity=0.267 Sum_probs=178.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+++||||++|||+++++.|+++|++|++++|+.++++.. .+ ..+..+.+|++|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~-------------------~~~~~~~~D~~~~~~ 59 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS-------------------LGFTGILLDLDDPES 59 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh-------------------CCCeEEEeecCCHHH
Confidence 7899999999999999999999999999999998765432 11 135678999999999
Q ss_pred HHHHHHHHHhhc-CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 93 VQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 93 v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+.++++.+.+.. +++|++|||+|... ..++.+.+.+++++++++|+.|++.+++.++|.|++. +.++||++||. .+
T Consensus 60 ~~~~~~~i~~~~~~~~~~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~-~~ 136 (256)
T PRK08017 60 VERAADEVIALTDNRLYGLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSV-MG 136 (256)
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCc-cc
Confidence 999999887643 68999999999865 4677888999999999999999999999999999887 46799999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc------hhhhhhhccCCHHHHHHHH
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ------NKQMFNIICELPETVARTL 245 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~------~~~~~~~~~~~pe~~a~~~ 245 (347)
..+.+....|+++|++++.++++|+.++.+.||++++|+||++.|++........ ...........|+++++.+
T Consensus 137 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~ 216 (256)
T PRK08017 137 LISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKL 216 (256)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence 7778888999999999999999999999999999999999999998765422111 0011111235799999999
Q ss_pred hhhhhhccc
Q 019009 246 VPRIRVVKG 254 (347)
Q Consensus 246 ~~~~~~~~~ 254 (347)
...+..+..
T Consensus 217 ~~~~~~~~~ 225 (256)
T PRK08017 217 RHALESPKP 225 (256)
T ss_pred HHHHhCCCC
Confidence 888876544
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-28 Score=217.21 Aligned_cols=191 Identities=30% Similarity=0.447 Sum_probs=165.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|++|||||+++||++++++|+++|++|++..|+.. ..+...+++.. .+.++.++.+|++|.
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 68 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEA-----------------LGRRAQAVQADVTDK 68 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-----------------cCCceEEEECCcCCH
Confidence 489999999999999999999999999888766554 34444444433 335688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.++++|++|||||... ..++.+.+.++++..+++|+.+++.+++.++|++++. +.+++|++||. .
T Consensus 69 ~~v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i~~SS~-~ 145 (249)
T PRK12825 69 AALEAAVAAAVERFGRIDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNISSV-A 145 (249)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcc-c
Confidence 9999999999888899999999999765 4667788999999999999999999999999999876 46899999987 4
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
+..+.++...|+.+|++++++++.+++++.+.||+++.|+||.+.|++....
T Consensus 146 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~ 197 (249)
T PRK12825 146 GLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT 197 (249)
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc
Confidence 5667778889999999999999999999988899999999999999986543
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=216.09 Aligned_cols=203 Identities=24% Similarity=0.303 Sum_probs=173.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+++|++|+++|+ +|++++|+++++++ .+.++.++.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------------------~~~~~~~~~~D~~~ 60 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------------------LGPRVVPLQLDVTD 60 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------------------cCCceEEEEecCCC
Confidence 468999999999999999999999999 99999999876532 02367889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++. ++++|++|||||......++.+.+.+++++.+++|+.+++.++++++|.|++. +.+++|++||.
T Consensus 61 ~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~- 134 (238)
T PRK08264 61 PASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-GGGAIVNVLSV- 134 (238)
T ss_pred HHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCh-
Confidence 9999887764 46899999999984335678889999999999999999999999999999876 47899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
.+..+.++...|+++|++++.+++.++.|+.+.||+++++.||.++|++...... ...+++++++.++..+
T Consensus 135 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~---------~~~~~~~~a~~~~~~~ 205 (238)
T PRK08264 135 LSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA---------PKASPADVARQILDAL 205 (238)
T ss_pred hhccCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc---------CCCCHHHHHHHHHHHH
Confidence 5667778888999999999999999999999899999999999999998543211 1347899999999877
Q ss_pred hhc
Q 019009 250 RVV 252 (347)
Q Consensus 250 ~~~ 252 (347)
...
T Consensus 206 ~~~ 208 (238)
T PRK08264 206 EAG 208 (238)
T ss_pred hCC
Confidence 643
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=215.79 Aligned_cols=188 Identities=24% Similarity=0.315 Sum_probs=161.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||++++++|+++|++|++++|+. +.++...+++... .+..+.++.+|++|
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~ 68 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL----------------RPGSAAALQADLLD 68 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh----------------cCCceEEEEcCCCC
Confidence 358999999999999999999999999999999864 4455544444331 12357789999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++.+.+.++++|++|||||... ..++.+.+.++++.++++|+.+++.+.+++.|.|.++ ++.++++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~- 144 (249)
T PRK09135 69 PDALPELVAACVAAFGRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDI- 144 (249)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeCh-
Confidence 99999999999999999999999999866 3667778889999999999999999999999999764 5788888775
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
.+..+.++...|++||++++.+++.++.|+.+ +|++++|.||++.|++.
T Consensus 145 ~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 145 HAERPLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPED 193 (249)
T ss_pred hhcCCCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccc
Confidence 45667778889999999999999999999965 79999999999999974
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=214.17 Aligned_cols=186 Identities=31% Similarity=0.499 Sum_probs=163.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+||||++++||..++++|+++|++|++++|+. +.++...+++++ .+.++.++.+|++|.+++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~~~ 63 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKA-----------------YGVKALGVVCDVSDREDV 63 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-----------------cCCceEEEEecCCCHHHH
Confidence 58999999999999999999999999999875 444445455543 345688999999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
+++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+.+++.+. +.+++|++||. ++..
T Consensus 64 ~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~-~~~~ 140 (239)
T TIGR01830 64 KAVVEEIEEELGPIDILVNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-RSGRIINISSV-VGLM 140 (239)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEECCc-cccC
Confidence 9999999999999999999999865 3566788899999999999999999999999999765 46799999987 5667
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+.+.+..|+++|++++.+++.|+.++...|+++++++||++.|++..
T Consensus 141 g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~ 187 (239)
T TIGR01830 141 GNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD 187 (239)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh
Confidence 77888999999999999999999999888999999999999998653
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=214.68 Aligned_cols=215 Identities=16% Similarity=0.194 Sum_probs=170.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||.++++.|+++|++|++++|++++++...+++.. . .++.++++|+++.
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~-~~~~~~~~Dl~~~ 65 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK-----------------Y-GNIHYVVGDVSST 65 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------c-CCeEEEECCCCCH
Confidence 468999999999999999999999999999999998877665555533 1 3578899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++...++++|.+|+|+|... ..++. +.++++.++++|+.+++.+.+.++|+|++ ++++|++||..+
T Consensus 66 ~~~~~~~~~~~~~~~~id~ii~~ag~~~-~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~ 139 (238)
T PRK05786 66 ESARNVIEKAAKVLNAIDGLVVTVGGYV-EDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSG 139 (238)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCCCcC-CCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchh
Confidence 9999999999888899999999999754 23333 34889999999999999999999999864 478999988633
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
...+.+....|++||++++.++++++.++.+.||++++|+||++.|++...... ...........+++++++.++..+.
T Consensus 140 ~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~-~~~~~~~~~~~~~~~va~~~~~~~~ 218 (238)
T PRK05786 140 IYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNW-KKLRKLGDDMAPPEDFAKVIIWLLT 218 (238)
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhh-hhhccccCCCCCHHHHHHHHHHHhc
Confidence 234566778899999999999999999999889999999999999986421100 0000001123467888887765543
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=209.86 Aligned_cols=242 Identities=16% Similarity=0.163 Sum_probs=202.9
Q ss_pred cCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGa--s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..||++||+|- .+.|+..||+.|.++|+++.++..++ ++++.++++.+.. .....++||+
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~-----------------~s~~v~~cDV 65 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL-----------------GSDLVLPCDV 65 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc-----------------cCCeEEecCC
Confidence 45899999994 57999999999999999999999887 7777777776532 2356789999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
++.++++++++++.+++|++|+|||+-|..+. .+.+.+.+.|+|...+++..++...++|++.|+|. ++|.||.
T Consensus 66 ~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~---~ggSilt 142 (259)
T COG0623 66 TNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN---NGGSILT 142 (259)
T ss_pred CCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC---CCCcEEE
Confidence 99999999999999999999999999998651 36678899999999999999999999999999997 4789999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
+|-. ++.+..|.+...+.+|++|+.-+|.||.++.+.|||||.|+-|+++|=-.. .... ...+. ...-...
T Consensus 143 LtYl-gs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas-gI~~-f~~~l------~~~e~~a 213 (259)
T COG0623 143 LTYL-GSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS-GIGD-FRKML------KENEANA 213 (259)
T ss_pred EEec-cceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh-cccc-HHHHH------HHHHhhC
Confidence 9876 577888999999999999999999999999999999999999999984322 2211 11111 1223456
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++++-.+.+++|+...||+|+....+++.....|.++
T Consensus 214 Pl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~ 250 (259)
T COG0623 214 PLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGY 250 (259)
T ss_pred CccCCCCHHHhhhhHHHHhcchhcccccceEEEcCCc
Confidence 6788888899999999999999988877777766665
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=209.51 Aligned_cols=199 Identities=19% Similarity=0.266 Sum_probs=158.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||++|||++++++|+++|++|++++|+++++++ +.. . .+.++.+|+++.+
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~-----------------~--~~~~~~~D~~~~~ 57 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQA-----------------L--GAEALALDVADPA 57 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHh-----------------c--cceEEEecCCCHH
Confidence 4789999999999999999999999999999999776543 222 1 2457899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++++++++.. +++|++|||+|... ...+..+.+.+++++++++|+.+++.++++++|+|.+. .+++++++|. .
T Consensus 58 ~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~-~ 132 (222)
T PRK06953 58 SVAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSR-M 132 (222)
T ss_pred HHHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCc-c
Confidence 99998877643 47999999999863 12456677899999999999999999999999999653 5789999886 3
Q ss_pred CCCCC-CC--cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 171 GGSST-PL--TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 171 ~~~~~-~~--~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
+..+. +. ...|+++|++++.+++.++.++. +++|++|+||+++|++..... ...+++.+..++.
T Consensus 133 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~~-----------~~~~~~~~~~~~~ 199 (222)
T PRK06953 133 GSIGDATGTTGWLYRASKAALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQA-----------ALDPAQSVAGMRR 199 (222)
T ss_pred cccccccCCCccccHHhHHHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCCC-----------CCCHHHHHHHHHH
Confidence 33332 21 23699999999999999999874 799999999999999854311 1257778877776
Q ss_pred hhhh
Q 019009 248 RIRV 251 (347)
Q Consensus 248 ~~~~ 251 (347)
.+..
T Consensus 200 ~~~~ 203 (222)
T PRK06953 200 VIAQ 203 (222)
T ss_pred HHHh
Confidence 6543
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=203.98 Aligned_cols=211 Identities=23% Similarity=0.321 Sum_probs=169.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||+++||+++++.|+++ ++|++++|+.+++++..+++ ..+.++.+|++|.+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~ 60 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL---------------------PGATPFPVDLTDPE 60 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh---------------------ccceEEecCCCCHH
Confidence 489999999999999999999999 99999999987654433221 23678899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++.+ +++|++||++|... ..++.+.+.+++++++++|+.+++.+++.+++.|+++ .+++|++||. .+
T Consensus 61 ~~~~~~~~~----~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~-~~ 132 (227)
T PRK08219 61 AIAAAVEQL----GRLDVLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSG-AG 132 (227)
T ss_pred HHHHHHHhc----CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcch-Hh
Confidence 998887643 58999999999866 3667788999999999999999999999999999875 5789999987 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|+.+|++++.+++.++.++... |++++|+||++.|++...................++++++.++..+..
T Consensus 133 ~~~~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~ 211 (227)
T PRK08219 133 LRANPGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDA 211 (227)
T ss_pred cCcCCCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcC
Confidence 6677788999999999999999999998766 999999999999886533221111111111225799999999877765
Q ss_pred cc
Q 019009 252 VK 253 (347)
Q Consensus 252 ~~ 253 (347)
+.
T Consensus 212 ~~ 213 (227)
T PRK08219 212 PP 213 (227)
T ss_pred CC
Confidence 43
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=215.53 Aligned_cols=194 Identities=19% Similarity=0.158 Sum_probs=150.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++|||||+|||++++++|+++|++|++++|+++++++.. .. ....+..+.+|++|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~-----------------~~~~v~~v~~Dvsd~ 236 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NG-----------------EDLPVKTLHWQVGQE 236 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hh-----------------cCCCeEEEEeeCCCH
Confidence 4799999999999999999999999999999999877654321 11 112456789999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC---CcEEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK---GGHIFNMDG 167 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~---~g~Iv~vsS 167 (347)
+++.+.+ +++|++|||||+.. ..+.+.|++++++++|+.|++.++++++|.|++++. ++.+|++|+
T Consensus 237 ~~v~~~l-------~~IDiLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss 305 (406)
T PRK07424 237 AALAELL-------EKVDILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE 305 (406)
T ss_pred HHHHHHh-------CCCCEEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc
Confidence 8876543 58999999999753 236788999999999999999999999999987632 245677764
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
. . ...+..+.|++||+|+.+|+. ++++. .++.|..++||+++|++.. ....+||++|+.++.
T Consensus 306 a--~-~~~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~------------~~~~spe~vA~~il~ 367 (406)
T PRK07424 306 A--E-VNPAFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP------------IGVMSADWVAKQILK 367 (406)
T ss_pred c--c-ccCCCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc------------CCCCCHHHHHHHHHH
Confidence 2 3 233456789999999999984 55543 4577788899999998631 112479999999998
Q ss_pred hhhhcc
Q 019009 248 RIRVVK 253 (347)
Q Consensus 248 ~~~~~~ 253 (347)
.+...+
T Consensus 368 ~i~~~~ 373 (406)
T PRK07424 368 LAKRDF 373 (406)
T ss_pred HHHCCC
Confidence 887544
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=201.77 Aligned_cols=192 Identities=18% Similarity=0.160 Sum_probs=156.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|+||+|+|||..+++.+.+.+......+++....+ .+.++- ..+........|++..
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v----------------~~gd~~v~~~g~~~e~ 66 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKV----------------AYGDDFVHVVGDITEE 66 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEE----------------EecCCcceechHHHHH
Confidence 4689999999999999999998888865544444333221 111100 0223445566788888
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCC--CCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL--QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~--~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
.-+..+++..++++|..|++|||||...+..... ..+.++|++.+++|+++++.+.+.++|.+++++-.+.||||||.
T Consensus 67 ~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~ 146 (253)
T KOG1204|consen 67 QLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSL 146 (253)
T ss_pred HHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecch
Confidence 8888899989999999999999999977544444 78899999999999999999999999999987446899999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
+..++++.|++||++|+|.++|.+.||.|-. .+|+|.++.||.++|+|....
T Consensus 147 -aav~p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~i 198 (253)
T KOG1204|consen 147 -AAVRPFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCI 198 (253)
T ss_pred -hhhccccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHH
Confidence 7899999999999999999999999999965 799999999999999986543
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=209.43 Aligned_cols=200 Identities=20% Similarity=0.215 Sum_probs=147.0
Q ss_pred HHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCc
Q 019009 28 LAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSI 107 (347)
Q Consensus 28 iA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~i 107 (347)
+|++|+++|++|++++|+.++.+ + ..++++|++|.++++++++++. +++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-----------------------~~~~~~Dl~~~~~v~~~~~~~~---~~i 49 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L-----------------------DGFIQADLGDPASIDAAVAALP---GRI 49 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h-----------------------hHhhcccCCCHHHHHHHHHHhc---CCC
Confidence 57899999999999999876531 1 1246899999999999988764 689
Q ss_pred cEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC---------------
Q 019009 108 DIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG--------------- 172 (347)
Q Consensus 108 D~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~--------------- 172 (347)
|+||||||+.. . +.+++++++|+.+++.+++.++|+|++ .|+||++||.. +.
T Consensus 50 D~li~nAG~~~-~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~-~~~~~~~~~~~~~~~~~ 116 (241)
T PRK12428 50 DALFNIAGVPG-T--------APVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLA-GAEWPQRLELHKALAAT 116 (241)
T ss_pred eEEEECCCCCC-C--------CCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHH-hhccccchHHHHhhhcc
Confidence 99999999742 1 247899999999999999999999963 47999999873 33
Q ss_pred ------------CCCCCcchhhhHHHHHHHHHHHHH-hHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHH
Q 019009 173 ------------SSTPLTAVYGSTKCGLRQLQASLF-KESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE 239 (347)
Q Consensus 173 ------------~~~~~~~~Y~asKaal~~~~~~La-~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe 239 (347)
.+.++...|++||+|+++|+++++ .|++++||+||+|+||++.|+|............. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~-------~ 189 (241)
T PRK12428 117 ASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERV-------D 189 (241)
T ss_pred chHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhh-------h
Confidence 355677899999999999999999 99999999999999999999986432211000000 0
Q ss_pred HHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 240 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 240 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
. ....+.++..|++++..+.|++++...+.++..+..+|
T Consensus 190 ~-~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdg 228 (241)
T PRK12428 190 S-DAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDG 228 (241)
T ss_pred h-cccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecC
Confidence 0 01123344556666666667776655444444433333
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.2e-25 Score=245.69 Aligned_cols=193 Identities=16% Similarity=0.059 Sum_probs=158.6
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCh--------------hHHHHHH-H-----------------
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSS--------------ESVRMTV-T----------------- 54 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~--------------~~l~~~~-~----------------- 54 (347)
.+..++++|||||++|||+++|++|+++ |++|++++|+. ..++... +
T Consensus 1993 ~l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~ 2072 (2582)
T TIGR02813 1993 ALNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDAL 2072 (2582)
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhc
Confidence 4567899999999999999999999998 69999999982 1111110 0
Q ss_pred --------HHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCC
Q 019009 55 --------ELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 126 (347)
Q Consensus 55 --------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~ 126 (347)
++.+.... ....+.++.++.||++|.++++++++++.++ ++||+||||||+.. ...+.+.
T Consensus 2073 ~~~~~~~~ei~~~la~----------l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~ 2140 (2582)
T TIGR02813 2073 VRPVLSSLEIAQALAA----------FKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDK 2140 (2582)
T ss_pred ccccchhHHHHHHHHH----------HHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccC
Confidence 00000000 0013567889999999999999999999877 68999999999976 5788999
Q ss_pred CHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEE
Q 019009 127 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGV 206 (347)
Q Consensus 127 ~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v 206 (347)
+.++|+++|++|+.|.+++++++.+.+. ++||++||. ++..+.+++..|+++|++++.+++.++.++. +++|
T Consensus 2141 t~e~f~~v~~~nv~G~~~Ll~al~~~~~-----~~IV~~SSv-ag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV 2212 (2582)
T TIGR02813 2141 TLEEFNAVYGTKVDGLLSLLAALNAENI-----KLLALFSSA-AGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKV 2212 (2582)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEech-hhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEE
Confidence 9999999999999999999999877543 469999998 6888889999999999999999999999975 4899
Q ss_pred EEeeCCcccCcccc
Q 019009 207 HTASPGMVLTDLLL 220 (347)
Q Consensus 207 ~~i~PG~v~T~~~~ 220 (347)
++|+||+++|+|..
T Consensus 2213 ~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2213 MSFNWGPWDGGMVN 2226 (2582)
T ss_pred EEEECCeecCCccc
Confidence 99999999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=178.08 Aligned_cols=175 Identities=21% Similarity=0.201 Sum_probs=146.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHH---HHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTV---TELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
|+++||||++|||++++++|+++|+ .|++++|+++..+... +++++ .+.++.++.+|++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~ 63 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA-----------------LGAEVTVVACDVA 63 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence 5899999999999999999999997 6888899876544332 33322 3457888999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.++++++++.+...++++|++|||||... ..++.+.+.++++.++++|+.+++.+.+++.+ . +.++||++||.
T Consensus 64 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~ii~~ss~ 137 (180)
T smart00822 64 DRAALAAALAAIPARLGPLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELTRD----L-PLDFFVLFSSV 137 (180)
T ss_pred CHHHHHHHHHHHHHHcCCeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHhcc----C-CcceEEEEccH
Confidence 999999999999888999999999999865 46678889999999999999999999998833 2 45789999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 215 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~ 215 (347)
.+..+.++...|+++|++++.+++.++. .|+++.++.||++.
T Consensus 138 -~~~~~~~~~~~y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~ 179 (180)
T smart00822 138 -AGVLGNPGQANYAAANAFLDALAAHRRA----RGLPATSINWGAWA 179 (180)
T ss_pred -HHhcCCCCchhhHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence 5666778889999999999999987654 57889999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.6e-24 Score=182.73 Aligned_cols=197 Identities=17% Similarity=0.179 Sum_probs=167.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-----eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-----RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-----~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.|+++|||++||||++|+++|++... +|+++||+.++.+++.+.+++.+++ ...++.++.+|
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~-------------~~i~~~yvlvD 69 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPK-------------STIEVTYVLVD 69 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCC-------------ceeEEEEEEEe
Confidence 48999999999999999999998653 5888999999999999999997764 34679999999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCC-------------C-------------CCCCCHHHHHHHHHhhhh
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-------------P-------------LLQFTNEEIEQIVSTNLV 140 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~-------------~-------------~~~~~~e~~~~~~~vN~~ 140 (347)
+++..++.++..++.++|.++|.++.|||++...+ | .-..+.|++..+|++|++
T Consensus 70 ~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVF 149 (341)
T KOG1478|consen 70 VSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVF 149 (341)
T ss_pred hhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhccc
Confidence 99999999999999999999999999999875211 1 112467899999999999
Q ss_pred HHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCC--------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCC
Q 019009 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS--------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG 212 (347)
Q Consensus 141 g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~--------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG 212 (347)
|+|.+.+.+.|++..++ ...+|.+||..+.... ..+...|..||.+++.+.-++-+.+.+.|+.-++++||
T Consensus 150 Ghfyli~~l~pll~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg 228 (341)
T KOG1478|consen 150 GHFYLIRELEPLLCHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPG 228 (341)
T ss_pred chhhhHhhhhhHhhcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCc
Confidence 99999999999998873 5589999987443222 23456899999999999999999999999999999999
Q ss_pred cccCcccccC
Q 019009 213 MVLTDLLLSG 222 (347)
Q Consensus 213 ~v~T~~~~~~ 222 (347)
..-|.+....
T Consensus 229 ~~tt~~~~~~ 238 (341)
T KOG1478|consen 229 IFTTNSFSEY 238 (341)
T ss_pred eeecchhhhh
Confidence 9998876543
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=181.18 Aligned_cols=188 Identities=14% Similarity=0.111 Sum_probs=144.6
Q ss_pred cCCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCChhHHH------------HHHHHHHHHhhhhhhhcCCCCcccc
Q 019009 10 SCTCRWFSVVSTRGLGKA--LAREFLLSGDRVVVASRSSESVR------------MTVTELEENLKEGMMAAGGSSKKNL 75 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~a--iA~~la~~G~~Vil~~R~~~~l~------------~~~~~l~~~~~~~~~~~~~~~~~~~ 75 (347)
.++|++||||+++|||+| +|+.| +.|++|+++++..++.+ ...+.+++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~----------------- 100 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA----------------- 100 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh-----------------
Confidence 567999999999999999 89999 99999998886443222 12223322
Q ss_pred cCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCC----------------C----------------
Q 019009 76 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP----------------L---------------- 123 (347)
Q Consensus 76 ~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~----------------~---------------- 123 (347)
.+..+..+.||+++.++++++++++.+++|+||+||||+|......| +
T Consensus 101 ~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s 180 (398)
T PRK13656 101 AGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVT 180 (398)
T ss_pred cCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEE
Confidence 34567789999999999999999999999999999999998742110 1
Q ss_pred -CCCCHHHHHHHHHhhhhH---HHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCCCc--chhhhHHHHHHHHHHHHHh
Q 019009 124 -LQFTNEEIEQIVSTNLVG---SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFK 197 (347)
Q Consensus 124 -~~~~~e~~~~~~~vN~~g---~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~--~~Y~asKaal~~~~~~La~ 197 (347)
...+.++++.++.+.--- .+.=.+...+.|. +++++|.+|+. +.....|.+ +.-+.+|++|+.-++.|+.
T Consensus 181 ~~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla---~g~~~va~TY~-G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~ 256 (398)
T PRK13656 181 VEPATEEEIADTVKVMGGEDWELWIDALDEAGVLA---EGAKTVAYSYI-GPELTHPIYWDGTIGKAKKDLDRTALALNE 256 (398)
T ss_pred EeeCCHHHHHHHHHhhccchHHHHHHHHHhccccc---CCcEEEEEecC-CcceeecccCCchHHHHHHHHHHHHHHHHH
Confidence 134566777776655331 1223455556664 47899999988 456666666 5889999999999999999
Q ss_pred HhcCCCeEEEEeeCCcccCccc
Q 019009 198 ESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 198 el~~~gI~v~~i~PG~v~T~~~ 219 (347)
+|++.|||+|++.+|.+.|.-.
T Consensus 257 ~L~~~giran~i~~g~~~T~As 278 (398)
T PRK13656 257 KLAAKGGDAYVSVLKAVVTQAS 278 (398)
T ss_pred HhhhcCCEEEEEecCcccchhh
Confidence 9999999999999999999754
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.9e-21 Score=186.85 Aligned_cols=225 Identities=15% Similarity=0.109 Sum_probs=157.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||+++||||+||||++++++|+++|++|++++|+.++++.+.+++.+..... .+ .....++.++.+|++|
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~---~G-----a~~~~~v~iV~gDLtD 149 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDV---EG-----TQPVEKLEIVECDLEK 149 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhcccc---cc-----ccccCceEEEEecCCC
Confidence 357999999999999999999999999999999999998877766654311000 00 0011357889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.+. ++++|+||||+|... . ...++...+++|+.|..++++++.+. +.++||++||.+
T Consensus 150 ~esI~~a-------LggiDiVVn~AG~~~--~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSig 210 (576)
T PLN03209 150 PDQIGPA-------LGNASVVICCIGASE--K-----EVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSLG 210 (576)
T ss_pred HHHHHHH-------hcCCCEEEEcccccc--c-----cccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccch
Confidence 9887653 368999999999743 1 11246788999999999999887653 357999999974
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc----chhhhhhhccCCHHHHHHHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI----QNKQMFNIICELPETVARTL 245 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~----~~~~~~~~~~~~pe~~a~~~ 245 (347)
....+.+.. .|. +|.++..+.+.+..++...||+++.|+||++.|++....... ............++++|+.+
T Consensus 211 a~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vV 288 (576)
T PLN03209 211 TNKVGFPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELM 288 (576)
T ss_pred hcccCcccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHH
Confidence 322333322 244 788888889999999998999999999999998754311000 00011111224788999998
Q ss_pred hhhhhhcc-ccccceeecc
Q 019009 246 VPRIRVVK-GSGKAINYLT 263 (347)
Q Consensus 246 ~~~~~~~~-~~~~~~~~l~ 263 (347)
+..+..++ ..++.+.+..
T Consensus 289 vfLasd~~as~~kvvevi~ 307 (576)
T PLN03209 289 ACMAKNRRLSYCKVVEVIA 307 (576)
T ss_pred HHHHcCchhccceEEEEEe
Confidence 87666544 3344444444
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-21 Score=164.94 Aligned_cols=174 Identities=21% Similarity=0.248 Sum_probs=137.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
++|||||.+|||..+++.|+++|. +|++++|+. ...++..+++++ .+.++.++.||++|
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~-----------------~g~~v~~~~~Dv~d 64 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELES-----------------AGARVEYVQCDVTD 64 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHH-----------------TT-EEEEEE--TTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHh-----------------CCCceeeeccCccC
Confidence 789999999999999999999985 899999993 244556677766 56799999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++.+.+++++||.+||+||... ..++.+.+.++++.++...+.|..++.+.+.+. .-..+|.+||.
T Consensus 65 ~~~v~~~~~~~~~~~~~i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-----~l~~~i~~SSi- 137 (181)
T PF08659_consen 65 PEAVAAALAQLRQRFGPIDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-----PLDFFILFSSI- 137 (181)
T ss_dssp HHHHHHHHHTSHTTSS-EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-----TTSEEEEEEEH-
T ss_pred HHHHHHHHHHHHhccCCcceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-----CCCeEEEECCh-
Confidence 99999999999999999999999999987 588999999999999999999999999887651 35678999988
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 215 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~ 215 (347)
++..+.++...|+++.+.++.|++..+.. |..+.+|+.|..+
T Consensus 138 s~~~G~~gq~~YaaAN~~lda~a~~~~~~----g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 138 SSLLGGPGQSAYAAANAFLDALARQRRSR----GLPAVSINWGAWD 179 (181)
T ss_dssp HHHTT-TTBHHHHHHHHHHHHHHHHHHHT----TSEEEEEEE-EBS
T ss_pred hHhccCcchHhHHHHHHHHHHHHHHHHhC----CCCEEEEEccccC
Confidence 67888999999999999999999876553 6778889888764
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=175.76 Aligned_cols=200 Identities=13% Similarity=0.100 Sum_probs=146.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
||++|||||+++||++++++|+++| ++|++.+|+..+.....+++ ...++.++.+|++|
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-------------------~~~~~~~v~~Dl~d 64 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF-------------------PAPCLRFFIGDVRD 64 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh-------------------CCCcEEEEEccCCC
Confidence 6899999999999999999999987 78999999866543322221 11357889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++ ++|+|||+||... .+..+.++ +..+++|+.|++++++++.+. +.++||++||.
T Consensus 65 ~~~l~~~~~-------~iD~Vih~Ag~~~--~~~~~~~~---~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS~- 126 (324)
T TIGR03589 65 KERLTRALR-------GVDYVVHAAALKQ--VPAAEYNP---FECIRTNINGAQNVIDAAIDN-----GVKRVVALSTD- 126 (324)
T ss_pred HHHHHHHHh-------cCCEEEECcccCC--CchhhcCH---HHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCC-
Confidence 999888764 5899999999753 22333333 468999999999999998763 34689999986
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh------hh-------hccC
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM------FN-------IICE 236 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~------~~-------~~~~ 236 (347)
.... ....|++||++.+.+++.++.++...|++++++.||.+..+.. .......... .. ....
T Consensus 127 ~~~~---p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~~~~~~~~~~~~~~~i~~~~~~r~~i 202 (324)
T TIGR03589 127 KAAN---PINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-SVVPFFKSLKEEGVTELPITDPRMTRFWI 202 (324)
T ss_pred CCCC---CCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-CcHHHHHHHHHhCCCCeeeCCCCceEeeE
Confidence 3322 2467999999999999999888888899999999999987521 1000000000 00 0113
Q ss_pred CHHHHHHHHhhhhhhc
Q 019009 237 LPETVARTLVPRIRVV 252 (347)
Q Consensus 237 ~pe~~a~~~~~~~~~~ 252 (347)
..+++++.++..+...
T Consensus 203 ~v~D~a~a~~~al~~~ 218 (324)
T TIGR03589 203 TLEQGVNFVLKSLERM 218 (324)
T ss_pred EHHHHHHHHHHHHhhC
Confidence 6789999998877653
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-20 Score=156.56 Aligned_cols=140 Identities=17% Similarity=0.159 Sum_probs=116.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+ .+.+..++.+|+++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~ 76 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN-----------------LGGEALFVSYDMEK 76 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCC
Confidence 3579999999999999999999999999999999998887777777654 33456788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC------CCcEEE
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP------KGGHIF 163 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~------~~g~Iv 163 (347)
.++++++++++.+.+|++|++|||||+.....++.+.+.++ ++ .+|+.+++..++.+.++|++++ ..|++.
T Consensus 77 ~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (169)
T PRK06720 77 QGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFG 153 (169)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceee
Confidence 99999999999999999999999999876445555556555 44 6777788999999999988753 357888
Q ss_pred EEcCCC
Q 019009 164 NMDGAG 169 (347)
Q Consensus 164 ~vsS~~ 169 (347)
.||+-+
T Consensus 154 ~~~~~~ 159 (169)
T PRK06720 154 IIGTKG 159 (169)
T ss_pred Eecccc
Confidence 888753
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-19 Score=168.98 Aligned_cols=176 Identities=15% Similarity=0.039 Sum_probs=135.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||+|+||.++++.|+++|++|++++|+..........+. ...++.++.+|++|.
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~~~ 64 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN------------------LAKKIEDHFGDIRDA 64 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh------------------hcCCceEEEccCCCH
Confidence 36899999999999999999999999999999998765433322221 113566789999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.. ++|+|||+||... ...+.++....+++|+.+++.+++++.+. +..+++|++||...
T Consensus 65 ~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~iv~~SS~~v 130 (349)
T TIGR02622 65 AKLRKAIAEF-----KPEIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRAI----GSVKAVVNVTSDKC 130 (349)
T ss_pred HHHHHHHhhc-----CCCEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHhc----CCCCEEEEEechhh
Confidence 9999988754 6899999998532 13345667788999999999999987431 12468999988521
Q ss_pred CC-----------CCCCCcchhhhHHHHHHHHHHHHHhHhcC----CCeEEEEeeCCcccCcc
Q 019009 171 GG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKR----SKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 ~~-----------~~~~~~~~Y~asKaal~~~~~~La~el~~----~gI~v~~i~PG~v~T~~ 218 (347)
-. .+......|+.||.+.+.+++.++.++.+ +|++++++.|+.+..|.
T Consensus 131 yg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 131 YRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred hCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 00 01233468999999999999999988754 48999999999998763
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=164.36 Aligned_cols=271 Identities=12% Similarity=0.107 Sum_probs=184.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH--HHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM--TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+++|+||||||.||.+|+++|+++|++|..+.|+++..+. .+.+++. .+.++..+..|++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~-----------------a~~~l~l~~aDL~ 67 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG-----------------AKERLKLFKADLL 67 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc-----------------CcccceEEecccc
Confidence 56899999999999999999999999999999999987443 3455543 3456899999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|+++++++++ ++|+|+|.|-... +...+ .-.++++.++.|+.++.+++...= .-.|||+.||.
T Consensus 68 d~~sf~~ai~-------gcdgVfH~Asp~~----~~~~~--~e~~li~pav~Gt~nVL~ac~~~~----sVkrvV~TSS~ 130 (327)
T KOG1502|consen 68 DEGSFDKAID-------GCDGVFHTASPVD----FDLED--PEKELIDPAVKGTKNVLEACKKTK----SVKRVVYTSST 130 (327)
T ss_pred ccchHHHHHh-------CCCEEEEeCccCC----CCCCC--cHHhhhhHHHHHHHHHHHHHhccC----CcceEEEeccH
Confidence 9999999987 6999999996432 11222 224789999999999999986542 23579999987
Q ss_pred CCCCCCCCCc---------------------chhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch
Q 019009 169 GSGGSSTPLT---------------------AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN 227 (347)
Q Consensus 169 ~~~~~~~~~~---------------------~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~ 227 (347)
.+.....+.. ..|+.||.--+.-+..++.| .|+...+|+||.|-.|..........
T Consensus 131 aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~ 207 (327)
T KOG1502|consen 131 AAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSL 207 (327)
T ss_pred HHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhH
Confidence 4332210111 24888888777777777776 47999999999999998877443322
Q ss_pred hhhhhhc-------------cCCHHHHHHHHhhhhhhccccccceeeccchHHHH-----HHhhhhhcCCcccc---cC-
Q 019009 228 KQMFNII-------------CELPETVARTLVPRIRVVKGSGKAINYLTPPRILL-----ALVTAWLRRGRWFD---DQ- 285 (347)
Q Consensus 228 ~~~~~~~-------------~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~---~~- 285 (347)
....... -...+++|++.+..++.|+..| +|++...... .......|.-..-. ..
T Consensus 208 ~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~G---Ryic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~ 284 (327)
T KOG1502|consen 208 NALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAKG---RYICVGEVVSIKEIADILRELFPDYPIPKKNAEEH 284 (327)
T ss_pred HHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccCc---eEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccc
Confidence 1111111 1357899999999999998877 4555432211 12222222222111 11
Q ss_pred Ccc-----ccccchhhhhhhccccccCchhhhhhccccchh
Q 019009 286 GRA-----LYAAEADRIRNWAENRARFSFTDAMEMYTENTW 321 (347)
Q Consensus 286 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (347)
... .+.+....+-.|..+.++..+.+.++++++..+
T Consensus 285 ~~~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~ 325 (327)
T KOG1502|consen 285 EGFLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGL 325 (327)
T ss_pred cccccccccccHHHHhcccceecChHHHHHHHHHHHHHhcC
Confidence 111 122233334458888888889998887776654
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.9e-19 Score=164.89 Aligned_cols=207 Identities=10% Similarity=0.089 Sum_probs=147.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||+|+||++++++|+++|++|++++|+.+..++........ . ...++.++.+|++|.+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~D~~d~~ 69 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALD-G--------------AKERLKLFKADLLDEG 69 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhcc-C--------------CCCceEEEeCCCCCch
Confidence 689999999999999999999999999999999877654332211110 0 1246788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++ ++|++|||||... ...+.+.+...+++|+.+++++++++.+.+ ..++||++||.. .
T Consensus 70 ~~~~~~~-------~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~----~~~~iv~~SS~~-~ 132 (325)
T PLN02989 70 SFELAID-------GCETVFHTASPVA-----ITVKTDPQVELINPAVNGTINVLRTCTKVS----SVKRVILTSSMA-A 132 (325)
T ss_pred HHHHHHc-------CCCEEEEeCCCCC-----CCCCCChHHHHHHHHHHHHHHHHHHHHHcC----CceEEEEecchh-h
Confidence 9888775 5899999999642 123345678899999999999999998764 246899999863 2
Q ss_pred CCCC--------------CC--------cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh
Q 019009 172 GSST--------------PL--------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 229 (347)
Q Consensus 172 ~~~~--------------~~--------~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~ 229 (347)
..+. +. ...|+.||.+.+.+++.++++ .|+.++.+.|+.+..|............
T Consensus 133 ~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~ 209 (325)
T PLN02989 133 VLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAV 209 (325)
T ss_pred eecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHH
Confidence 1110 00 146999999999999888776 3789999999999887643211100000
Q ss_pred hhhh------------ccCCHHHHHHHHhhhhhhcc
Q 019009 230 MFNI------------ICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 230 ~~~~------------~~~~pe~~a~~~~~~~~~~~ 253 (347)
+... .....+++|+.++..+..++
T Consensus 210 i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~~~ 245 (325)
T PLN02989 210 IVELMKGKNPFNTTHHRFVDVRDVALAHVKALETPS 245 (325)
T ss_pred HHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcCcc
Confidence 0000 01236899999887776554
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.4e-18 Score=155.83 Aligned_cols=207 Identities=9% Similarity=0.021 Sum_probs=143.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH--HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|++|||||+|+||++++++|+++|++|+++.|+..+ .++...++.. .+.++.++.+|++|
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~d 68 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC-----------------EEERLKVFDVDPLD 68 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc-----------------CCCceEEEEecCCC
Confidence 5899999999999999999999999999999996432 2222222211 12357788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.+++. .+|.++|.++... +.+ +.++.++++|+.|++++++++.+.+ ..++||++||..
T Consensus 69 ~~~~~~~l~-------~~d~v~~~~~~~~------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~----~v~riV~~SS~~ 130 (297)
T PLN02583 69 YHSILDALK-------GCSGLFCCFDPPS------DYP-SYDEKMVDVEVRAAHNVLEACAQTD----TIEKVVFTSSLT 130 (297)
T ss_pred HHHHHHHHc-------CCCEEEEeCccCC------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEecchH
Confidence 988876553 5899998765422 111 2457899999999999999998764 236899999863
Q ss_pred CCCCC---C-C---------C--------cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh
Q 019009 170 SGGSS---T-P---------L--------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 228 (347)
Q Consensus 170 ~~~~~---~-~---------~--------~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~ 228 (347)
+...+ . + . ...|+.||...+.+++.++++ .|+++++|+|+.|.+|...........
T Consensus 131 a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~~~~ 207 (297)
T PLN02583 131 AVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPYLKG 207 (297)
T ss_pred heecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhhhcC
Confidence 21111 0 0 0 015999999999999888765 489999999999988864321100000
Q ss_pred --hhh---hhccCCHHHHHHHHhhhhhhccccc
Q 019009 229 --QMF---NIICELPETVARTLVPRIRVVKGSG 256 (347)
Q Consensus 229 --~~~---~~~~~~pe~~a~~~~~~~~~~~~~~ 256 (347)
... .......+++|+..+..+..+...+
T Consensus 208 ~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~ 240 (297)
T PLN02583 208 AAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYG 240 (297)
T ss_pred CcccCcccCcceEEHHHHHHHHHHHhcCcccCC
Confidence 000 0112357999999998888665544
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-17 Score=155.10 Aligned_cols=209 Identities=13% Similarity=0.094 Sum_probs=144.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++||||+|+||.+++++|+++|++|+++.|+..+.+...+ +..... ...++.++.+|++|.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~Dl~~~ 68 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEH-LLALDG--------------AKERLKLFKADLLEE 68 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHH-HHhccC--------------CCCceEEEecCCCCc
Confidence 36899999999999999999999999999999998765443222 211000 123578899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ ++|++||+||... .. .. +...+++++|+.|+.++++++... ..-++||++||.++
T Consensus 69 ~~~~~~~~-------~~d~vih~A~~~~-~~---~~--~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~ 131 (322)
T PLN02986 69 SSFEQAIE-------GCDAVFHTASPVF-FT---VK--DPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAA 131 (322)
T ss_pred chHHHHHh-------CCCEEEEeCCCcC-CC---CC--CchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhh
Confidence 98888775 5899999998632 11 11 223568899999999999887542 12358999998632
Q ss_pred CCCCC----------------C-----CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh-
Q 019009 171 GGSST----------------P-----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK- 228 (347)
Q Consensus 171 ~~~~~----------------~-----~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~- 228 (347)
...+. | ....|+.||.+.+.+++.+.+++ |++++++.|+.+.+|...........
T Consensus 132 ~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~ 208 (322)
T PLN02986 132 VLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVEL 208 (322)
T ss_pred eecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHH
Confidence 11110 1 12569999999999998887763 79999999999998864321110000
Q ss_pred --hhh------h---hccCCHHHHHHHHhhhhhhccc
Q 019009 229 --QMF------N---IICELPETVARTLVPRIRVVKG 254 (347)
Q Consensus 229 --~~~------~---~~~~~pe~~a~~~~~~~~~~~~ 254 (347)
.+. . ......+++|+.++..+..+..
T Consensus 209 ~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~~ 245 (322)
T PLN02986 209 IVDFINGKNLFNNRFYRFVDVRDVALAHIKALETPSA 245 (322)
T ss_pred HHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCccc
Confidence 000 0 0123578999999888876644
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-17 Score=147.16 Aligned_cols=207 Identities=16% Similarity=0.119 Sum_probs=132.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+++++||||||+||++++++|+++|++|+++.|+++++++... ...++.++.+|++|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---------------------~~~~~~~~~~Dl~d 73 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---------------------QDPSLQIVRADVTE 73 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---------------------cCCceEEEEeeCCC
Confidence 346899999999999999999999999999999999876432211 11357788999998
Q ss_pred H-HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 90 P-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 90 ~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
. +++.+. +. .++|+||+|+|......+. ..+++|+.++..+++++. +. +.++||++||.
T Consensus 74 ~~~~l~~~---~~---~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~----~~-~~~~iV~iSS~ 133 (251)
T PLN00141 74 GSDKLVEA---IG---DDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACR----KA-GVTRFILVSSI 133 (251)
T ss_pred CHHHHHHH---hh---cCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH----Hc-CCCEEEEEccc
Confidence 3 332222 10 2699999999874311111 124678888888888863 33 35799999987
Q ss_pred CCC--CCCCCCcchhhhHHHHHHHHHHHHHhH--hcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 169 GSG--GSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 169 ~~~--~~~~~~~~~Y~asKaal~~~~~~La~e--l~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
+.. ..+.+....|...|.....+...+..| +...|++++.|.||++.++...................+++++|+.
T Consensus 134 ~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~ 213 (251)
T PLN00141 134 LVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEV 213 (251)
T ss_pred cccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHH
Confidence 321 112233455776665444333223222 4567999999999999876532211111111111123588999999
Q ss_pred Hhhhhhhcccccc
Q 019009 245 LVPRIRVVKGSGK 257 (347)
Q Consensus 245 ~~~~~~~~~~~~~ 257 (347)
++..+..++..+.
T Consensus 214 ~~~~~~~~~~~~~ 226 (251)
T PLN00141 214 AVEALLCPESSYK 226 (251)
T ss_pred HHHHhcChhhcCc
Confidence 9988776654443
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-16 Score=150.09 Aligned_cols=201 Identities=16% Similarity=0.071 Sum_probs=141.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH-HHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT-VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||+|+||++++++|+++|++|++++|+.++.... ..++.. ...++.++.+|++|
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~d 71 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-----------------GKERLILCKADLQD 71 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-----------------CCCcEEEEecCcCC
Confidence 468999999999999999999999999999999987653221 122211 12357788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++ ++|+|||+||... ++.+..+++|+.++.++++++.+. +-++||++||..
T Consensus 72 ~~~~~~~~~-------~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~~ 129 (342)
T PLN02214 72 YEALKAAID-------GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSIG 129 (342)
T ss_pred hHHHHHHHh-------cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccce
Confidence 998888765 5899999998531 134678999999999999988653 235899999852
Q ss_pred CCC--C-CCC-----------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh
Q 019009 170 SGG--S-STP-----------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 229 (347)
Q Consensus 170 ~~~--~-~~~-----------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~ 229 (347)
+.. . ..+ ....|+.||.+.+.+++.+++++ |+++..+.|+.|..|............
T Consensus 130 avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~ 206 (342)
T PLN02214 130 AVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYH 206 (342)
T ss_pred eeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHH
Confidence 211 0 000 12469999999999998887763 799999999999887532111000000
Q ss_pred h----h----h-----hccCCHHHHHHHHhhhhhhcc
Q 019009 230 M----F----N-----IICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 230 ~----~----~-----~~~~~pe~~a~~~~~~~~~~~ 253 (347)
+ . . ......+++|+.++..+..+.
T Consensus 207 ~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~ 243 (342)
T PLN02214 207 VLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS 243 (342)
T ss_pred HHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcc
Confidence 0 0 0 011257899999988877653
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.9e-17 Score=154.05 Aligned_cols=180 Identities=13% Similarity=0.068 Sum_probs=132.5
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+-+.++++|||||+|+||.+++++|+++|++|++++|+.++.+....++. .+.++.++.+|
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~D 66 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK------------------EGDRLRLFRAD 66 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc------------------cCCeEEEEECC
Confidence 345667899999999999999999999999999999998765544333321 12467889999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHH--HHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~--~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
+++.+++.++++ ++|+|||+||...........+++.+ ..++++|+.+.+.+++++.+.. ..+++|+
T Consensus 67 l~~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~----~~~~~v~ 135 (353)
T PLN02896 67 LQEEGSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK----TVKRVVF 135 (353)
T ss_pred CCCHHHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC----CccEEEE
Confidence 999998887764 58999999997542111122333333 4577888899999999887642 2458999
Q ss_pred EcCCCCCCCC----------------C---------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 165 MDGAGSGGSS----------------T---------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 165 vsS~~~~~~~----------------~---------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
+||.. .... . +....|+.||.+.+.+++.++++ .|+++.++.|+.+..|..
T Consensus 136 ~SS~~-vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 136 TSSIS-TLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFL 211 (353)
T ss_pred Eechh-hccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCc
Confidence 99852 2110 0 11137999999999999988776 379999999998888753
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=157.33 Aligned_cols=180 Identities=11% Similarity=0.010 Sum_probs=126.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.... ...+.++.++.+|++|.
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl~d~ 72 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDP-------------HPNKARMKLHYGDLSDA 72 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccc-------------ccccCceEEEEecCCCH
Confidence 589999999999999999999999999999998764321 1122221100 00124588899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC-
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG- 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~- 169 (347)
+++.++++.+ .+|+|||+||.... ....+..+..+++|+.|+.++++++.+.+.+++...++|++||..
T Consensus 73 ~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~v 142 (340)
T PLN02653 73 SSLRRWLDDI-----KPDEVYNLAAQSHV-----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEM 142 (340)
T ss_pred HHHHHHHHHc-----CCCEEEECCcccch-----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHH
Confidence 9999988764 58999999997431 122334577889999999999999998875431113688887641
Q ss_pred CCCC--------CCCCcchhhhHHHHHHHHHHHHHhHhcC---CCeEEEEeeCCcc
Q 019009 170 SGGS--------STPLTAVYGSTKCGLRQLQASLFKESKR---SKVGVHTASPGMV 214 (347)
Q Consensus 170 ~~~~--------~~~~~~~Y~asKaal~~~~~~La~el~~---~gI~v~~i~PG~v 214 (347)
.+.. +......|+.||.+.+.+++.++.++.- .++.++.+.|+..
T Consensus 143 yg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 198 (340)
T PLN02653 143 YGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG 198 (340)
T ss_pred hCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence 1111 1113467999999999999999888642 2345566667643
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.9e-17 Score=153.47 Aligned_cols=208 Identities=10% Similarity=0.040 Sum_probs=144.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
..|++|||||+|.||.+++++|+++|++|++++|+.+........+... . ...++.++.+|++|.
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~--------------~~~~~~~v~~Dl~d~ 68 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLP-G--------------ATTRLTLWKADLAVE 68 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhcc-C--------------CCCceEEEEecCCCh
Confidence 3589999999999999999999999999999999876554332211100 0 113578899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+.+.++++ .+|+|||+|+... .... +..+..+++|+.+++++++++.+.. ..++||++||.+.
T Consensus 69 ~~~~~~~~-------~~d~ViH~A~~~~----~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~----~~~r~v~~SS~~~ 131 (351)
T PLN02650 69 GSFDDAIR-------GCTGVFHVATPMD----FESK--DPENEVIKPTVNGMLSIMKACAKAK----TVRRIVFTSSAGT 131 (351)
T ss_pred hhHHHHHh-------CCCEEEEeCCCCC----CCCC--CchhhhhhHHHHHHHHHHHHHHhcC----CceEEEEecchhh
Confidence 98887765 5899999998532 1111 2236788999999999999987652 1357999998632
Q ss_pred CCC---CCC------------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-chh
Q 019009 171 GGS---STP------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNK 228 (347)
Q Consensus 171 ~~~---~~~------------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-~~~ 228 (347)
... ..+ ....|+.||.+.+.+++.++.+ +|++++.+.|+.+.+|........ ...
T Consensus 132 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~ 208 (351)
T PLN02650 132 VNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLIT 208 (351)
T ss_pred cccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHH
Confidence 110 000 1137999999999999988876 589999999999988853221110 000
Q ss_pred hh---------h----hhccCCHHHHHHHHhhhhhhcc
Q 019009 229 QM---------F----NIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 229 ~~---------~----~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
.. . .......+++++.++..+..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~~ 246 (351)
T PLN02650 209 ALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHPA 246 (351)
T ss_pred HHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCcC
Confidence 00 0 0112367899999887776544
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-16 Score=147.40 Aligned_cols=207 Identities=12% Similarity=0.104 Sum_probs=141.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||+|+||+.++++|+++|++|+++.|+....... ..+..... ...++.++.+|++|.+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~~~~ 68 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDG--------------AKERLHLFKANLLEEG 68 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccC--------------CCCceEEEeccccCcc
Confidence 58999999999999999999999999999999987643222 11111000 1236788999999998
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS- 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~- 170 (347)
++.++++ ++|+|||+|+... ... . +..+..+++|+.++.++++++.... +..+||++||.++
T Consensus 69 ~~~~~~~-------~~d~Vih~A~~~~--~~~--~--~~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~v~~SS~~~~ 131 (322)
T PLN02662 69 SFDSVVD-------GCEGVFHTASPFY--HDV--T--DPQAELIDPAVKGTLNVLRSCAKVP----SVKRVVVTSSMAAV 131 (322)
T ss_pred hHHHHHc-------CCCEEEEeCCccc--CCC--C--ChHHHHHHHHHHHHHHHHHHHHhCC----CCCEEEEccCHHHh
Confidence 8877765 5899999998642 111 1 1225788999999999999986532 2358999998531
Q ss_pred CCCCC---------------CC-----cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh
Q 019009 171 GGSST---------------PL-----TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 230 (347)
Q Consensus 171 ~~~~~---------------~~-----~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~ 230 (347)
...+. |. ...|+.+|.+.+.+++.+.++ .|++++.+.|+.+.+|............+
T Consensus 132 ~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~ 208 (322)
T PLN02662 132 AYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAI 208 (322)
T ss_pred cCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHH
Confidence 11110 10 136999999999998877765 47999999999999886432111000000
Q ss_pred h------------hhccCCHHHHHHHHhhhhhhcc
Q 019009 231 F------------NIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 231 ~------------~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
. ..-....+++|+.++..+..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 243 (322)
T PLN02662 209 LNLINGAQTFPNASYRWVDVRDVANAHIQAFEIPS 243 (322)
T ss_pred HHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCcC
Confidence 0 0011357899999988777654
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.9e-16 Score=152.55 Aligned_cols=182 Identities=12% Similarity=0.066 Sum_probs=130.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-------HHH------HHHHHHHHhhhhhhhcCCCCccccc
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-------VRM------TVTELEENLKEGMMAAGGSSKKNLV 76 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-------l~~------~~~~l~~~~~~~~~~~~~~~~~~~~ 76 (347)
..+|+||||||+|+||++++++|+++|++|++++|.... .+. ..+.++..... .
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------~ 111 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-------------S 111 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-------------h
Confidence 456899999999999999999999999999998753211 000 00111110000 1
Q ss_pred CceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC
Q 019009 77 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ 156 (347)
Q Consensus 77 ~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~ 156 (347)
+.++.++.+|++|.+++.++++.. ++|+|||+|+... .+....++++++..+++|+.|++++++++...-
T Consensus 112 ~~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--- 181 (442)
T PLN02572 112 GKEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--- 181 (442)
T ss_pred CCcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 235788999999999999888753 6999999997643 344455667778889999999999999886541
Q ss_pred CCCcEEEEEcCCCC-CCC----------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCc
Q 019009 157 PKGGHIFNMDGAGS-GGS----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM 213 (347)
Q Consensus 157 ~~~g~Iv~vsS~~~-~~~----------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~ 213 (347)
...++|++||... +.. +......|+.||.+.+.+.+..+.. +|+.+..+.|+.
T Consensus 182 -v~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~ 257 (442)
T PLN02572 182 -PDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGV 257 (442)
T ss_pred -CCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEeccc
Confidence 1247999987621 110 0112347999999999999877765 589999999999
Q ss_pred ccCcc
Q 019009 214 VLTDL 218 (347)
Q Consensus 214 v~T~~ 218 (347)
+..|.
T Consensus 258 vyGp~ 262 (442)
T PLN02572 258 VYGVR 262 (442)
T ss_pred ccCCC
Confidence 98774
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=150.35 Aligned_cols=177 Identities=12% Similarity=0.116 Sum_probs=125.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEE-EEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vi-l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|++|||||||+||.++++.|.++|++|+ +.+|..+.. . ...+.... ...++.++.+|++|.
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~~~~~---------------~~~~~~~~~~Dl~d~ 63 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAG-N-LMSLAPVA---------------QSERFAFEKVDICDR 63 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcccc-c-hhhhhhcc---------------cCCceEEEECCCcCh
Confidence 37899999999999999999999998755 445543211 1 11111100 123577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhH---cC-CCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR---DQ-PKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~---~~-~~~g~Iv~vs 166 (347)
++++++++. .++|+|||+||.... ..+.+..+..+++|+.+++.+++++.+.|. +. ....++|++|
T Consensus 64 ~~~~~~~~~-----~~~D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~S 133 (355)
T PRK10217 64 AELARVFTE-----HQPDCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHIS 133 (355)
T ss_pred HHHHHHHhh-----cCCCEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEec
Confidence 999888775 269999999986431 233456789999999999999999987642 11 1235899998
Q ss_pred CCCC-CC-----------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 167 GAGS-GG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 167 S~~~-~~-----------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
|... +. .+......|+.||.+.+.+++.+++++ ++.+..+.|+.+..|.
T Consensus 134 S~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~ 194 (355)
T PRK10217 134 TDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPY 194 (355)
T ss_pred chhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCC
Confidence 8521 10 122235689999999999999998875 6777788888776654
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=148.53 Aligned_cols=171 Identities=12% Similarity=0.108 Sum_probs=126.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||+|+||+.++++|+++|++|+++.|+.+...... .+... . ...++.++.+|++|.+
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~-~--------------~~~~~~~~~~Dl~d~~ 72 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRAL-Q--------------ELGDLKIFGADLTDEE 72 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhc-C--------------CCCceEEEEcCCCChH
Confidence 589999999999999999999999999999999865433221 11110 0 0125778899999998
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ ++|+|||+|+... ... .+..+..+++|+.+...+++++.+.. +.++||++||...-
T Consensus 73 ~~~~~~~-------~~d~vih~A~~~~----~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~----~~~~~v~~SS~~~~ 135 (338)
T PLN00198 73 SFEAPIA-------GCDLVFHVATPVN----FAS--EDPENDMIKPAIQGVHNVLKACAKAK----SVKRVILTSSAAAV 135 (338)
T ss_pred HHHHHHh-------cCCEEEEeCCCCc----cCC--CChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEeecceee
Confidence 8887664 5899999998521 111 12345678999999999999986631 24689999986211
Q ss_pred C-C----------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 172 G-S----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 ~-~----------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. . ..+....|+.||.+.+.+++.++.+ .|+.++.+.|+.|..|.
T Consensus 136 g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 136 SINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPS 202 (338)
T ss_pred eccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCC
Confidence 1 0 0122456999999999999988776 47999999999998874
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-16 Score=148.15 Aligned_cols=163 Identities=15% Similarity=0.057 Sum_probs=114.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
|++|||||+|+||.+++++|+++|++|++++|+.+... +..+.+.+... ...+..+.++.+|++|.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~Dl~d~~ 68 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPH------------NVNKARMKLHYGDLTDSS 68 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccc------------cccccceeEEEeccCCHH
Confidence 68999999999999999999999999999999864211 11111111000 001235788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS- 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~- 170 (347)
++.++++.+ ++|+|||+|+.... . ...+.-...+++|+.|+.++++++.+.-.+ +..++|++||...
T Consensus 69 ~l~~~~~~~-----~~d~ViH~Aa~~~~-~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~~v~~SS~~vy 136 (343)
T TIGR01472 69 NLRRIIDEI-----KPTEIYNLAAQSHV-K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVKFYQASTSELY 136 (343)
T ss_pred HHHHHHHhC-----CCCEEEECCccccc-c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCeeEEEeccHHhh
Confidence 998888754 58999999997541 1 122233567789999999999998774211 1247899988521
Q ss_pred CC---------CCCCCcchhhhHHHHHHHHHHHHHhHh
Q 019009 171 GG---------SSTPLTAVYGSTKCGLRQLQASLFKES 199 (347)
Q Consensus 171 ~~---------~~~~~~~~Y~asKaal~~~~~~La~el 199 (347)
+. .+......|+.||.+.+.+++.+++++
T Consensus 137 g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 174 (343)
T TIGR01472 137 GKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAY 174 (343)
T ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 10 111234689999999999999998875
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=143.72 Aligned_cols=172 Identities=16% Similarity=0.103 Sum_probs=121.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||+|+||.+++++|+++|++|++++|......+..+++...... .+.++.++.+|++|.
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~ 70 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGD-------------LGDNLVFHKVDLRDK 70 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcc-------------cCccceEEecCcCCH
Confidence 3589999999999999999999999999999987644332222222221000 123577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.. ++|+|||+||.... . .+.++..+.+++|+.++.++++++. +. +.+++|++||.+.
T Consensus 71 ~~l~~~~~~~-----~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~Ss~~v 135 (352)
T PLN02240 71 EALEKVFAST-----RFDAVIHFAGLKAV-G----ESVAKPLLYYDNNLVGTINLLEVMA----KH-GCKKLVFSSSATV 135 (352)
T ss_pred HHHHHHHHhC-----CCCEEEEccccCCc-c----ccccCHHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEEccHHH
Confidence 9998887642 79999999997431 1 2234567899999999999888653 22 3458999988521
Q ss_pred -CC---------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCC
Q 019009 171 -GG---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG 212 (347)
Q Consensus 171 -~~---------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG 212 (347)
+. .+......|+.||.+.+.+++.++.+. .++.+..+.|+
T Consensus 136 yg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~ 185 (352)
T PLN02240 136 YGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYF 185 (352)
T ss_pred hCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeec
Confidence 10 111234689999999999999887652 35666666654
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-15 Score=139.46 Aligned_cols=170 Identities=12% Similarity=0.097 Sum_probs=123.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+++||||||+||.+++++|+++| ++|++.+|.... -.+..+.+. ...++.++.+|++|+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~~~ 62 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE------------------DNPRYRFVKGDIGDR 62 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc------------------cCCCcEEEEcCCcCH
Confidence 48999999999999999999987 689888764321 111111111 113577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.. ++|+|||+|+.... +.+.+..+..+++|+.++..+++++...+. ..++|++||...
T Consensus 63 ~~~~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v 128 (317)
T TIGR01181 63 ELVSRLFTEH-----QPDAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEV 128 (317)
T ss_pred HHHHHHHhhc-----CCCEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccce
Confidence 9998887643 59999999986431 223455678899999999999988766542 347999987421
Q ss_pred -CC-C---------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 -GG-S---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 -~~-~---------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
+. . +......|+.+|.+.+.+++.++.+. ++++..+.|+.+..+.
T Consensus 129 ~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 129 YGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPY 184 (317)
T ss_pred eCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence 10 0 11123479999999999999988764 7899999999887654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.6e-15 Score=138.14 Aligned_cols=168 Identities=16% Similarity=0.118 Sum_probs=117.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++||||+++||+++++.|+++|++|++++|...........+.+. .+.++.++.+|++|.+++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d~~~~ 65 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALL 65 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh----------------cCCCceEEEccCCCHHHH
Confidence 5899999999999999999999999999887543322222222221 123467789999999998
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-CC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-GG 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~-~~ 172 (347)
.++++. .++|+|||+||.... .. ..+.....+++|+.++..+++++. +. +.+++|++||... +.
T Consensus 66 ~~~~~~-----~~~d~vvh~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~Ss~~~yg~ 130 (338)
T PRK10675 66 TEILHD-----HAIDTVIHFAGLKAV-GE----SVQKPLEYYDNNVNGTLRLISAMR----AA-NVKNLIFSSSATVYGD 130 (338)
T ss_pred HHHHhc-----CCCCEEEECCccccc-cc----hhhCHHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEeccHHhhCC
Confidence 887753 369999999987531 11 123345678999999999887653 33 3468999988521 10
Q ss_pred C---------CC-CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc
Q 019009 173 S---------ST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV 214 (347)
Q Consensus 173 ~---------~~-~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v 214 (347)
. +. .....|+.+|.+.+.+++.++++.. ++++..+.|+.+
T Consensus 131 ~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v 180 (338)
T PRK10675 131 QPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNP 180 (338)
T ss_pred CCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeee
Confidence 0 00 1256899999999999999876642 466666665443
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=136.28 Aligned_cols=160 Identities=19% Similarity=0.201 Sum_probs=121.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++++||||+|+||..+++.|+++|++|++++|+++.... + ....+.++.+|++|.++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~-------------------~~~~~~~~~~D~~~~~~ 57 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----L-------------------EGLDVEIVEGDLRDPAS 57 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----c-------------------ccCCceEEEeeCCCHHH
Confidence 368999999999999999999999999999998764321 1 11247788999999998
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++ ++|++||+|+... ... ++.+..+++|+.++..+++++... +.+++|++||.. ..
T Consensus 58 l~~~~~-------~~d~vi~~a~~~~----~~~---~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~-~~ 117 (328)
T TIGR03466 58 LRKAVA-------GCRALFHVAADYR----LWA---PDPEEMYAANVEGTRNLLRAALEA-----GVERVVYTSSVA-TL 117 (328)
T ss_pred HHHHHh-------CCCEEEEeceecc----cCC---CCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEechh-hc
Confidence 888765 5899999997532 111 234678899999999999887643 246899999852 21
Q ss_pred CC--C--------C-----CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 173 SS--T--------P-----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 173 ~~--~--------~-----~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.. . + ....|+.+|.+.+.+++.++.+ .|+++..+.|+.+..+.
T Consensus 118 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~ 175 (328)
T TIGR03466 118 GVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPR 175 (328)
T ss_pred CcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCC
Confidence 10 0 0 1347999999999999988765 47899999999886653
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=137.87 Aligned_cols=210 Identities=11% Similarity=0.020 Sum_probs=136.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+||||||+|+||.+++++|+++|++|+++.|+.+..+.+ +++...... . .....+.++.+|++|.
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~--------~---~~~~~~~~v~~Dl~d~ 119 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEM--------G---RSNDGIWTVMANLTEP 119 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccc--------c---ccCCceEEEEcCCCCH
Confidence 369999999999999999999999999999999987654433 222110000 0 0012477889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ .+|.+||.|+...+ ..... ..+...++|+.+...+++++... . +-.++|++||..+
T Consensus 120 ~~l~~~i~-------~~d~V~hlA~~~~~-~~~~~----~~~~~~~~nv~gt~~llea~~~~---~-~v~r~V~~SS~~~ 183 (367)
T PLN02686 120 ESLHEAFD-------GCAGVFHTSAFVDP-AGLSG----YTKSMAELEAKASENVIEACVRT---E-SVRKCVFTSSLLA 183 (367)
T ss_pred HHHHHHHH-------hccEEEecCeeecc-ccccc----ccchhhhhhHHHHHHHHHHHHhc---C-CccEEEEeccHHH
Confidence 99988775 46899998886432 11111 11244577888888888876532 1 2347899988521
Q ss_pred CC------CC----------------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-ch
Q 019009 171 GG------SS----------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QN 227 (347)
Q Consensus 171 ~~------~~----------------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-~~ 227 (347)
.. .. ......|+.||.+.+.+++.++++ .|+++++|.|+.|.+|........ ..
T Consensus 184 ~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~ 260 (367)
T PLN02686 184 CVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATI 260 (367)
T ss_pred hcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHH
Confidence 10 00 001236999999999999988776 589999999999998853211000 00
Q ss_pred h------hhhh---hccCCHHHHHHHHhhhhhh
Q 019009 228 K------QMFN---IICELPETVARTLVPRIRV 251 (347)
Q Consensus 228 ~------~~~~---~~~~~pe~~a~~~~~~~~~ 251 (347)
. .+.. ......+++++.++..+..
T Consensus 261 ~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~ 293 (367)
T PLN02686 261 AYLKGAQEMLADGLLATADVERLAEAHVCVYEA 293 (367)
T ss_pred HHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhc
Confidence 0 0000 0123478888888777654
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.2e-14 Score=137.37 Aligned_cols=176 Identities=18% Similarity=0.182 Sum_probs=145.1
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+-.||++|||||+|-||.++++++++.+. ++++.+|++.++.+...+++...+ ..++.++-+|
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~---------------~~~~~~~igd 310 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP---------------ELKLRFYIGD 310 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC---------------CcceEEEecc
Confidence 456789999999999999999999999985 799999999999988888887542 2578899999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+.|.+.+.++++.. ++|+++|.|..-+ -|..|.. ..+.+.+|++|+.++++++...= -.++|.+|
T Consensus 311 VrD~~~~~~~~~~~-----kvd~VfHAAA~KH--VPl~E~n---P~Eai~tNV~GT~nv~~aa~~~~-----V~~~V~iS 375 (588)
T COG1086 311 VRDRDRVERAMEGH-----KVDIVFHAAALKH--VPLVEYN---PEEAIKTNVLGTENVAEAAIKNG-----VKKFVLIS 375 (588)
T ss_pred cccHHHHHHHHhcC-----CCceEEEhhhhcc--CcchhcC---HHHHHHHhhHhHHHHHHHHHHhC-----CCEEEEEe
Confidence 99999999988753 6999999998754 4554444 46788999999999999998763 44699998
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
+-- + ......||++|...+.++.+++.+....+-++.+|.=|.|-..
T Consensus 376 TDK-A---V~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGS 422 (588)
T COG1086 376 TDK-A---VNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGS 422 (588)
T ss_pred cCc-c---cCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecC
Confidence 642 2 2234689999999999999999887765789999999988654
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-14 Score=136.64 Aligned_cols=173 Identities=11% Similarity=0.123 Sum_probs=120.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
++|||||+|+||.+++++|+++|++ |+.+++... ..+.. ..+. .+.++.++.+|++|.
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~------------------~~~~~~~~~~Dl~d~ 62 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS------------------DSERYVFEHADICDR 62 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc------------------cCCceEEEEecCCCH
Confidence 5899999999999999999999976 554554321 11111 1110 123577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC----CCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~----~~g~Iv~vs 166 (347)
++++++++. .++|+|||+||.... . .+.+..+..+++|+.|+.++++++.++|.... +..++|++|
T Consensus 63 ~~~~~~~~~-----~~~d~vih~A~~~~~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~S 132 (352)
T PRK10084 63 AELDRIFAQ-----HQPDAVMHLAAESHV-D----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHIS 132 (352)
T ss_pred HHHHHHHHh-----cCCCEEEECCcccCC-c----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEec
Confidence 999998875 279999999997431 1 11223467899999999999999998764311 134799998
Q ss_pred CCC-CCCC-------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 167 GAG-SGGS-------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 167 S~~-~~~~-------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
|.. .+.. +......|+.||.+.+.+++.+++++ |+.+..+.|+.+..|.
T Consensus 133 S~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~ 201 (352)
T PRK10084 133 TDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPY 201 (352)
T ss_pred chhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCC
Confidence 852 1110 11223589999999999999998875 5666667777766553
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-14 Score=134.50 Aligned_cols=169 Identities=17% Similarity=0.105 Sum_probs=121.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||+|+||.+++++|+++|++|++++|......+...++.. . ..+..+.+|+++.+++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~-----------------~-~~~~~~~~D~~~~~~~ 62 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER-----------------I-TRVTFVEGDLRDRELL 62 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc-----------------c-cceEEEECCCCCHHHH
Confidence 479999999999999999999999999887644322221111111 1 1467889999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-CC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-GG 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~-~~ 172 (347)
.++++. +++|++|||||.... . .+.+...+.+++|+.++..+++++.. . +.+++|++||... +.
T Consensus 63 ~~~~~~-----~~~d~vv~~ag~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 63 DRLFEE-----HKIDAVIHFAGLIAV-G----ESVQDPLKYYRNNVVNTLNLLEAMQQ----T-GVKKFIFSSSAAVYGE 127 (328)
T ss_pred HHHHHh-----CCCcEEEECccccCc-c----hhhcCchhhhhhhHHHHHHHHHHHHh----c-CCCEEEEecchhhcCC
Confidence 888763 479999999997531 1 12234457788999999999887543 2 2468999887521 10
Q ss_pred C---------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 173 S---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 173 ~---------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
. +......|+.+|++.+.+++.++.+. .++++..+.|+.+..+
T Consensus 128 ~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 128 PSSIPISEDSPLGPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGA 179 (328)
T ss_pred CCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCC
Confidence 0 11123579999999999999988763 4688999999877665
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.6e-14 Score=134.76 Aligned_cols=179 Identities=15% Similarity=0.101 Sum_probs=125.9
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
-+|+. |+++||||+|-||..++++|+++|++|++++|..........++....+. ....++.++.+|
T Consensus 11 ~~~~~-~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~D 77 (348)
T PRK15181 11 LVLAP-KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE------------EQWSRFIFIQGD 77 (348)
T ss_pred ccccC-CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcccc------------ccCCceEEEEcc
Confidence 35555 88999999999999999999999999999998654332222222110000 011357789999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+.|.+.+.++++ .+|+|||.|+.... +. ..++....+++|+.|+.++.+++.. . +-.++|++|
T Consensus 78 i~d~~~l~~~~~-------~~d~ViHlAa~~~~--~~---~~~~~~~~~~~Nv~gt~nll~~~~~----~-~~~~~v~~S 140 (348)
T PRK15181 78 IRKFTDCQKACK-------NVDYVLHQAALGSV--PR---SLKDPIATNSANIDGFLNMLTAARD----A-HVSSFTYAA 140 (348)
T ss_pred CCCHHHHHHHhh-------CCCEEEECccccCc--hh---hhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEee
Confidence 999888777664 48999999986431 11 1123345789999999999988743 2 245899998
Q ss_pred CCCC-CCCC---------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 167 GAGS-GGSS---------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 167 S~~~-~~~~---------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
|... +... ......|+.||.+.+.+.+.++.+ .|+++..+.|+.+-.|.
T Consensus 141 S~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~ 199 (348)
T PRK15181 141 SSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRR 199 (348)
T ss_pred chHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcC
Confidence 7521 1100 112357999999999998887665 47899999999887764
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.1e-14 Score=130.42 Aligned_cols=172 Identities=19% Similarity=0.192 Sum_probs=123.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
||||||+|-||.+++++|++.+ .+|++++|++.++-+...++.+..++.. ....+.++.+|++|.+.+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~-----------v~~~~~~vigDvrd~~~l 69 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPK-----------VRFEIVPVIGDVRDKERL 69 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TT-----------CEEEEE--CTSCCHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccC-----------cccccCceeecccCHHHH
Confidence 7999999999999999999999 4799999999999888888865432100 011345678999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
.+++++. ++|+++|.|.+-. -|+.+.. ..+.+++|++|+.++++++..+ +-.++|+||+-- +.
T Consensus 70 ~~~~~~~-----~pdiVfHaAA~Kh--Vpl~E~~---p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDK-Av- 132 (293)
T PF02719_consen 70 NRIFEEY-----KPDIVFHAAALKH--VPLMEDN---PFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDK-AV- 132 (293)
T ss_dssp HHHTT-------T-SEEEE--------HHHHCCC---HHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECG-CS-
T ss_pred HHHHhhc-----CCCEEEEChhcCC--CChHHhC---HHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccc-cC-
Confidence 8887653 7999999998754 3444443 3677999999999999999875 245799998652 22
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccC
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T 216 (347)
.....||+||...+.+..+.+......+.++.+|.=|.|..
T Consensus 133 --~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlg 173 (293)
T PF02719_consen 133 --NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLG 173 (293)
T ss_dssp --S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETT
T ss_pred --CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceec
Confidence 23478999999999999999998866778999999998864
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.5e-13 Score=122.81 Aligned_cols=186 Identities=15% Similarity=0.138 Sum_probs=150.0
Q ss_pred CCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGa-s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
..+|+|.|. +.-|++.+|..|-++|+-|++++.+.+..+...++ ....+.....|..++
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e--------------------~~~dI~~L~ld~~~~ 62 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE--------------------DRPDIRPLWLDDSDP 62 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc--------------------cCCCCCCcccCCCCC
Confidence 368999995 89999999999999999999999988765433222 224577888888887
Q ss_pred HHHHHHHHHHHhhcC--------------CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC
Q 019009 91 ADVQKLSNFAVNEFG--------------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ 156 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g--------------~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~ 156 (347)
.++...++++.+.+. .+..+|.......+.+|+++++.+.|.+.++.|+..++.+++.++|+|+.+
T Consensus 63 ~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~ 142 (299)
T PF08643_consen 63 SSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSR 142 (299)
T ss_pred cchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777777777665433 345666666555567999999999999999999999999999999999983
Q ss_pred C-CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 157 P-KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 157 ~-~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
. .+.+||.++-+.......|+.+.-.....++.+|+++|++|+.+++|.|..|+-|.++-.
T Consensus 143 ~~~~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 143 SNQKSKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred cCCCceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 2 345666665332566778888999999999999999999999999999999999998765
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.3e-13 Score=129.16 Aligned_cols=174 Identities=18% Similarity=0.225 Sum_probs=115.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+||||||+||.+++++|+++| ++|+++.|+.+... ..+.+++....... ........++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~-~~~~l~~~~~~~~~-----~~~~~~~~~v~~~~~D~~~~~ 74 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEH-AMERLREALRSYRL-----WQEDLARERIEVVAGDLSEPR 74 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHH-HHHHHHHHHHHhCC-----CCchhhhCCEEEEeCCcCccc
Confidence 58999999999999999999999 78999999865321 11222211110000 000000046888999998653
Q ss_pred ------HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 92 ------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 92 ------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
....+. ..+|++||||+.... . ..++..+++|+.++..+++.+... +..+++++
T Consensus 75 ~gl~~~~~~~~~-------~~~d~vih~a~~~~~-~-------~~~~~~~~~nv~g~~~ll~~a~~~-----~~~~~v~i 134 (367)
T TIGR01746 75 LGLSDAEWERLA-------ENVDTIVHNGALVNW-V-------YPYSELRAANVLGTREVLRLAASG-----RAKPLHYV 134 (367)
T ss_pred CCcCHHHHHHHH-------hhCCEEEeCCcEecc-C-------CcHHHHhhhhhHHHHHHHHHHhhC-----CCceEEEE
Confidence 222222 369999999986431 1 134667889999999888877542 23459999
Q ss_pred cCCCCCCCC---------------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 166 DGAGSGGSS---------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 166 sS~~~~~~~---------------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
||....... ......|+.||.+.+.+.+.++. .|++++.+.||.+.++
T Consensus 135 SS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 135 STISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN 197 (367)
T ss_pred ccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence 987322110 01134699999999998876544 3899999999999875
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.8e-13 Score=130.39 Aligned_cols=170 Identities=9% Similarity=0.072 Sum_probs=118.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.++||||||+|.||..++++|+++ |++|++++|+.++.......... . ...++.++.+|++|.
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~---------------~-~~~~~~~~~~Dl~d~ 77 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV---------------P-WSGRIQFHRINIKHD 77 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccc---------------c-CCCCeEEEEcCCCCh
Confidence 367999999999999999999998 58999999876554322110000 0 113588999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+.+.++++ .+|+|||+|+...+ .... .+ -...+..|+.+...+++++.. . +.++|++||...
T Consensus 78 ~~l~~~~~-------~~d~ViHlAa~~~~-~~~~-~~---~~~~~~~n~~gt~~ll~aa~~----~--~~r~v~~SS~~v 139 (386)
T PLN02427 78 SRLEGLIK-------MADLTINLAAICTP-ADYN-TR---PLDTIYSNFIDALPVVKYCSE----N--NKRLIHFSTCEV 139 (386)
T ss_pred HHHHHHhh-------cCCEEEEcccccCh-hhhh-hC---hHHHHHHHHHHHHHHHHHHHh----c--CCEEEEEeeeee
Confidence 88887764 47999999987432 1111 11 123456799999988887643 2 257999998521
Q ss_pred -CCC-------CCC------------------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 -GGS-------STP------------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 -~~~-------~~~------------------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
+.. ..| ....|+.||.+.+.+.+.++.. .|+.+..+.|+.|..+.
T Consensus 140 Yg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 140 YGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 216 (386)
T ss_pred eCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence 100 000 1136999999999999876654 57999999999988764
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.6e-13 Score=128.38 Aligned_cols=164 Identities=12% Similarity=0.088 Sum_probs=116.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH--HHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM--TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..+++++||||||+||++++++|+++|++|++++|+..+.+. ..+++.. ....+.++.+|+
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-----------------~~~~v~~v~~Dl 120 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-----------------ELPGAEVVFGDV 120 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-----------------hcCCceEEEeeC
Confidence 456899999999999999999999999999999998765421 1111111 123577899999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.+++.++++.+ .+++|+||||+|... ... ...+++|+.+..++++++. +. +.+++|++||
T Consensus 121 ~d~~~l~~~~~~~---~~~~D~Vi~~aa~~~--~~~--------~~~~~vn~~~~~~ll~aa~----~~-gv~r~V~iSS 182 (390)
T PLN02657 121 TDADSLRKVLFSE---GDPVDVVVSCLASRT--GGV--------KDSWKIDYQATKNSLDAGR----EV-GAKHFVLLSA 182 (390)
T ss_pred CCHHHHHHHHHHh---CCCCcEEEECCccCC--CCC--------ccchhhHHHHHHHHHHHHH----Hc-CCCEEEEEee
Confidence 9999999887643 126999999998532 111 1234678877777777653 33 3568999998
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
.. .. .....|..+|...+...+. ...++++..|.|+.+..+
T Consensus 183 ~~-v~---~p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~ 223 (390)
T PLN02657 183 IC-VQ---KPLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKS 223 (390)
T ss_pred cc-cc---CcchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcc
Confidence 73 22 2234688899888876543 235899999999877543
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=115.98 Aligned_cols=164 Identities=24% Similarity=0.232 Sum_probs=126.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
||||||+|-||.+++++|+++|+.|+...|+.........+ .++.++.+|+.|.+.++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----------------------~~~~~~~~dl~~~~~~~ 58 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----------------------LNVEFVIGDLTDKEQLE 58 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----------------------TTEEEEESETTSHHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----------------------ceEEEEEeecccccccc
Confidence 79999999999999999999999998888876643221111 25788999999999999
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS 174 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~ 174 (347)
++++.. .+|++||+|+... ...+.+.....++.|+.+...+++++... +..++|++||...-...
T Consensus 59 ~~~~~~-----~~d~vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 59 KLLEKA-----NIDVVIHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDP 123 (236)
T ss_dssp HHHHHH-----TESEEEEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSS
T ss_pred cccccc-----CceEEEEeecccc-----ccccccccccccccccccccccccccccc-----ccccccccccccccccc
Confidence 998875 7999999998632 11223556788888988888888877654 23689999885221111
Q ss_pred --C--------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 175 --T--------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 175 --~--------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. .....|+.+|...+.+.+.+.++. ++++..+.|+.+-.+.
T Consensus 124 ~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 124 DGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG 174 (236)
T ss_dssp SSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred ccccccccccccccccccccccccccccccccccc---cccccccccccccccc
Confidence 1 133569999999999999988875 7999999999998876
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.9e-13 Score=122.04 Aligned_cols=165 Identities=15% Similarity=0.118 Sum_probs=121.0
Q ss_pred EEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 16 FSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 16 lITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
|||||+|.||..++++|+++| ++|.+.++.+.... ...+.. .....++.+|++|.+++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~------------------~~~~~~~~~Di~d~~~l 60 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK------------------SGVKEYIQGDITDPESL 60 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc------------------ccceeEEEeccccHHHH
Confidence 699999999999999999999 78988888765421 111111 12233889999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
.++++ ++|+|||.|..... .. ....+.++++|+.|+-++++++... +-.++|++||..+-..
T Consensus 61 ~~a~~-------g~d~V~H~Aa~~~~-~~-----~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~ 122 (280)
T PF01073_consen 61 EEALE-------GVDVVFHTAAPVPP-WG-----DYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFD 122 (280)
T ss_pred HHHhc-------CCceEEEeCccccc-cC-----cccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEe
Confidence 99886 68999999987432 11 3446789999999999999988753 3568999998743211
Q ss_pred ---CC-------------CCcchhhhHHHHHHHHHHHHHh-HhcC-CCeEEEEeeCCcccCcc
Q 019009 174 ---ST-------------PLTAVYGSTKCGLRQLQASLFK-ESKR-SKVGVHTASPGMVLTDL 218 (347)
Q Consensus 174 ---~~-------------~~~~~Y~asKaal~~~~~~La~-el~~-~gI~v~~i~PG~v~T~~ 218 (347)
+. .....|+.||+..+.++..... ++.+ ..++..+|.|..|-.|.
T Consensus 123 ~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~ 185 (280)
T PF01073_consen 123 NYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPG 185 (280)
T ss_pred ccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcc
Confidence 10 1234799999999999876554 2221 24889999999998774
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-12 Score=124.02 Aligned_cols=167 Identities=14% Similarity=0.047 Sum_probs=119.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+.+|+||||||+|.||+++++.|.++|++|++++|..... +.. ......++.+|++|
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~-----------------~~~~~~~~~~Dl~d 75 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSE-----------------DMFCHEFHLVDLRV 75 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------ccc-----------------ccccceEEECCCCC
Confidence 5678999999999999999999999999999999864321 000 01124567899999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+.+.++++ ++|+|||.|+...+ ...... .....+..|+.++.++++++... +-.++|++||..
T Consensus 76 ~~~~~~~~~-------~~D~Vih~Aa~~~~-~~~~~~---~~~~~~~~N~~~t~nll~aa~~~-----~vk~~V~~SS~~ 139 (370)
T PLN02695 76 MENCLKVTK-------GVDHVFNLAADMGG-MGFIQS---NHSVIMYNNTMISFNMLEAARIN-----GVKRFFYASSAC 139 (370)
T ss_pred HHHHHHHHh-------CCCEEEEcccccCC-cccccc---CchhhHHHHHHHHHHHHHHHHHh-----CCCEEEEeCchh
Confidence 887766653 58999999986431 111111 12345678999998888876432 245899998852
Q ss_pred C-CCC---------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 S-GGS---------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~-~~~---------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. +.. +......|+.+|.+.+.+.+.++.. .|+.+..+.|+.+..|.
T Consensus 140 vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 201 (370)
T PLN02695 140 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPF 201 (370)
T ss_pred hcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCC
Confidence 1 100 1223458999999999999887665 47899999999888763
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.5e-12 Score=121.96 Aligned_cols=163 Identities=10% Similarity=0.061 Sum_probs=114.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC-CH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-EP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls-~~ 90 (347)
++||||||+|.||..++++|+++ |++|++++|+.++... +. ....+.++.+|++ +.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~------------------~~~~~~~~~~Dl~~~~ 59 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV------------------NHPRMHFFEGDITINK 59 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc------------------cCCCeEEEeCCCCCCH
Confidence 57999999999999999999986 6999999987653221 11 1135788899998 66
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+.+.++++ ++|+|||+|+...+ .. ..++-+..+++|+.+..++++++.. . +.++|++||...
T Consensus 60 ~~~~~~~~-------~~d~ViH~aa~~~~-~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~--~~~~v~~SS~~v 121 (347)
T PRK11908 60 EWIEYHVK-------KCDVILPLVAIATP-AT----YVKQPLRVFELDFEANLPIVRSAVK----Y--GKHLVFPSTSEV 121 (347)
T ss_pred HHHHHHHc-------CCCEEEECcccCCh-HH----hhcCcHHHHHHHHHHHHHHHHHHHh----c--CCeEEEEeccee
Confidence 66655443 58999999987432 11 1122356789999999988887653 2 257999988521
Q ss_pred -CC-CC-------C--------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 -GG-SS-------T--------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 -~~-~~-------~--------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
+. .. . .....|+.||.+.+.+.+.++.+ .|+.+..+.|+.+..+.
T Consensus 122 yg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 122 YGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPG 183 (347)
T ss_pred eccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCC
Confidence 10 00 0 01236999999999999888765 46788888888776653
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=122.04 Aligned_cols=161 Identities=11% Similarity=0.113 Sum_probs=110.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
||||||+|.||+.++++|+++|++++++.|+....... . ....+|+.|..+.+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~--------------------------~~~~~~~~d~~~~~ 54 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V--------------------------NLVDLDIADYMDKE 54 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H--------------------------hhhhhhhhhhhhHH
Confidence 79999999999999999999999877776654332110 0 01245777766666
Q ss_pred HHHHHHHh--hcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-C
Q 019009 95 KLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-G 171 (347)
Q Consensus 95 ~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~-~ 171 (347)
.+++.+.+ .++++|+|||+||.... . ..+. +..+++|+.++..+++++.. . +.++|++||... +
T Consensus 55 ~~~~~~~~~~~~~~~d~Vih~A~~~~~-~---~~~~---~~~~~~n~~~t~~ll~~~~~----~--~~~~i~~SS~~vyg 121 (308)
T PRK11150 55 DFLAQIMAGDDFGDIEAIFHEGACSST-T---EWDG---KYMMDNNYQYSKELLHYCLE----R--EIPFLYASSAATYG 121 (308)
T ss_pred HHHHHHhcccccCCccEEEECceecCC-c---CCCh---HHHHHHHHHHHHHHHHHHHH----c--CCcEEEEcchHHhC
Confidence 66555542 34579999999986431 1 1222 34689999999888888753 2 236899988521 1
Q ss_pred C-C--------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 172 G-S--------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 ~-~--------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. . +......|+.||.+.+.+.+.++.+ .++.+..+.|+.+-.+.
T Consensus 122 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~ 174 (308)
T PRK11150 122 GRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPR 174 (308)
T ss_pred cCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCC
Confidence 0 0 0112357999999999998887655 47888899998877653
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-12 Score=113.97 Aligned_cols=149 Identities=15% Similarity=0.120 Sum_probs=113.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++||||||.|-||..++.+|++.|++|++.+.-.....+.+..+ ...++..|+.|.+-
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----------------------~~~f~~gDi~D~~~ 58 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----------------------QFKFYEGDLLDRAL 58 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----------------------cCceEEeccccHHH
Confidence 37999999999999999999999999999987554433333221 15689999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+++++++. +||.|||.||.... ..+.+.-.+-++.|+.|++.|++++... +-..|||.||. + .
T Consensus 59 L~~vf~~~-----~idaViHFAa~~~V-----gESv~~Pl~Yy~NNv~gTl~Ll~am~~~-----gv~~~vFSStA-a-v 121 (329)
T COG1087 59 LTAVFEEN-----KIDAVVHFAASISV-----GESVQNPLKYYDNNVVGTLNLIEAMLQT-----GVKKFIFSSTA-A-V 121 (329)
T ss_pred HHHHHHhc-----CCCEEEECcccccc-----chhhhCHHHHHhhchHhHHHHHHHHHHh-----CCCEEEEecch-h-h
Confidence 88888764 89999999997542 2344555678899999999998887655 24468887765 2 2
Q ss_pred CCC------------CCcchhhhHHHHHHHHHHHHHhHhc
Q 019009 173 SST------------PLTAVYGSTKCGLRQLQASLFKESK 200 (347)
Q Consensus 173 ~~~------------~~~~~Y~asKaal~~~~~~La~el~ 200 (347)
.+. ....+|+.||...+.+.+.+++-..
T Consensus 122 YG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~ 161 (329)
T COG1087 122 YGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP 161 (329)
T ss_pred cCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence 221 2335799999999999999988753
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.7e-12 Score=108.80 Aligned_cols=173 Identities=20% Similarity=0.222 Sum_probs=120.2
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
|+|+||||.+|+.++++|+++|++|+++.|++++.++ . .++..+.+|+.|.+++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~-------------------~~~~~~~~d~~d~~~~~ 55 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------S-------------------PGVEIIQGDLFDPDSVK 55 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------C-------------------TTEEEEESCTTCHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------c-------------------cccccceeeehhhhhhh
Confidence 7999999999999999999999999999999987654 1 36889999999998888
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS 174 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~ 174 (347)
++++ ++|++|+++|... . + ...++.++..+++. +-.++|.+|+.+ ....
T Consensus 56 ~al~-------~~d~vi~~~~~~~--~-------~-------------~~~~~~~~~a~~~~-~~~~~v~~s~~~-~~~~ 104 (183)
T PF13460_consen 56 AALK-------GADAVIHAAGPPP--K-------D-------------VDAAKNIIEAAKKA-GVKRVVYLSSAG-VYRD 104 (183)
T ss_dssp HHHT-------TSSEEEECCHSTT--T-------H-------------HHHHHHHHHHHHHT-TSSEEEEEEETT-GTTT
T ss_pred hhhh-------hcchhhhhhhhhc--c-------c-------------cccccccccccccc-ccccceeeeccc-cCCC
Confidence 8765 7899999997643 1 1 44556677777666 466899999874 3222
Q ss_pred CCC---------cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 175 TPL---------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 175 ~~~---------~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
.+. ...|...|...+.+. + ..+++...+.||++..+.....................+++|+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~e~~~----~---~~~~~~~ivrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~ 177 (183)
T PF13460_consen 105 PPGLFSDEDKPIFPEYARDKREAEEAL----R---ESGLNWTIVRPGWIYGNPSRSYRLIKEGGPQGVNFISREDVAKAI 177 (183)
T ss_dssp CTSEEEGGTCGGGHHHHHHHHHHHHHH----H---HSTSEEEEEEESEEEBTTSSSEEEESSTSTTSHCEEEHHHHHHHH
T ss_pred CCcccccccccchhhhHHHHHHHHHHH----H---hcCCCEEEEECcEeEeCCCcceeEEeccCCCCcCcCCHHHHHHHH
Confidence 222 124666665554333 1 248999999999997765221110000111122334678899888
Q ss_pred hhhhh
Q 019009 246 VPRIR 250 (347)
Q Consensus 246 ~~~~~ 250 (347)
+..+.
T Consensus 178 ~~~l~ 182 (183)
T PF13460_consen 178 VEALE 182 (183)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 76553
|
... |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.7e-12 Score=131.73 Aligned_cols=165 Identities=10% Similarity=0.067 Sum_probs=118.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+++||||||+|.||..++++|+++ |++|+.++|+...... +. ...++.++.+|++|
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~------------------~~~~~~~~~gDl~d 371 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL------------------GHPRFHFVEGDISI 371 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc------------------CCCceEEEeccccC
Confidence 4689999999999999999999986 7999999997653221 10 11357788999998
Q ss_pred HHH-HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 90 PAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 90 ~~~-v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
.++ ++++++ ++|+|||.|+...+.. . . +..+..+++|+.++..+.+++... +.++|++||.
T Consensus 372 ~~~~l~~~l~-------~~D~ViHlAa~~~~~~-~-~---~~~~~~~~~Nv~~t~~ll~a~~~~------~~~~V~~SS~ 433 (660)
T PRK08125 372 HSEWIEYHIK-------KCDVVLPLVAIATPIE-Y-T---RNPLRVFELDFEENLKIIRYCVKY------NKRIIFPSTS 433 (660)
T ss_pred cHHHHHHHhc-------CCCEEEECccccCchh-h-c---cCHHHHHHhhHHHHHHHHHHHHhc------CCeEEEEcch
Confidence 655 344332 6899999999754211 1 1 123457889999999998887642 2479999885
Q ss_pred CC-CC-C--C----------CC---CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 169 GS-GG-S--S----------TP---LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 169 ~~-~~-~--~----------~~---~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.. +. . + .| ....|+.||.+.+.+++.++++ +|+++..+.|+.+..|.
T Consensus 434 ~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 434 EVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPR 497 (660)
T ss_pred hhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCC
Confidence 21 10 0 0 01 1236999999999999988766 47899999999887763
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.4e-12 Score=129.89 Aligned_cols=172 Identities=13% Similarity=0.080 Sum_probs=120.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS--GDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+|+||||||+|.||+.++++|+++ |++|+..+|.. +... .+.... ...++.++.+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~----~l~~~~---------------~~~~v~~~~~D 65 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK----NLNPSK---------------SSPNFKFVKGD 65 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh----hhhhcc---------------cCCCeEEEECC
Confidence 3589999999999999999999998 57898888753 1111 111100 12367889999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++|.+.+..++.. .++|+|||+|+.... +...++....+++|+.++..+++++... +...++|++|
T Consensus 66 l~d~~~~~~~~~~-----~~~D~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~vkr~I~~S 131 (668)
T PLN02260 66 IASADLVNYLLIT-----EGIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVS 131 (668)
T ss_pred CCChHHHHHHHhh-----cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEc
Confidence 9998887765432 379999999997531 1112233567899999999888876432 1245899999
Q ss_pred CCCC-CCC------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 167 GAGS-GGS------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 167 S~~~-~~~------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
|... +.. +......|+.+|.+.+.+.+.+.++ .++.+..+.|+.|..+.
T Consensus 132 S~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~ 193 (668)
T PLN02260 132 TDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 193 (668)
T ss_pred chHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcC
Confidence 8521 100 0112357999999999999988776 37888999998887653
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=110.97 Aligned_cols=167 Identities=13% Similarity=0.110 Sum_probs=124.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC-----ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASR-----SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R-----~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
+++|||||.|.||.++++.+.++.. +|+.++. +.+.+ +.+. ...+..+++.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l----~~~~------------------~~~~~~fv~~ 58 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL----ADVE------------------DSPRYRFVQG 58 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH----Hhhh------------------cCCCceEEec
Confidence 4789999999999999999998874 4676654 22222 2222 2357899999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|+.|.+.+.+++++- .+|++||-|.-... +-+.++-+..+++|++|++.|..++..+..+ =+++.|
T Consensus 59 DI~D~~~v~~~~~~~-----~~D~VvhfAAESHV-----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HI 124 (340)
T COG1088 59 DICDRELVDRLFKEY-----QPDAVVHFAAESHV-----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHI 124 (340)
T ss_pred cccCHHHHHHHHHhc-----CCCeEEEechhccc-----cccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEe
Confidence 999999988887753 79999999976542 3444556778999999999999999888632 258888
Q ss_pred cCCC------C------CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 166 DGAG------S------GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 166 sS~~------~------~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
|.-- . ...+....++|+||||+-..|++++.+-+ |+.++...+..--.|.
T Consensus 125 STDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPy 186 (340)
T COG1088 125 STDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPY 186 (340)
T ss_pred ccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCC
Confidence 7421 0 11234456789999999999999999885 7788777776655553
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-11 Score=115.38 Aligned_cols=188 Identities=12% Similarity=0.069 Sum_probs=122.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+|+||||||.||++++++|+++|++|++.+|+.++.. .+.. ..+.++.+|++|++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~~-------------------~~v~~v~~Dl~d~~~l 58 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLKE-------------------WGAELVYGDLSLPETL 58 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHhh-------------------cCCEEEECCCCCHHHH
Confidence 6999999999999999999999999999999875432 1111 2477889999999988
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
.++++ ++|++||+++... . +.....++|+.++.++.+++.. . +-.++|++||.+....
T Consensus 59 ~~al~-------g~d~Vi~~~~~~~--~--------~~~~~~~~~~~~~~~l~~aa~~----~-gvkr~I~~Ss~~~~~~ 116 (317)
T CHL00194 59 PPSFK-------GVTAIIDASTSRP--S--------DLYNAKQIDWDGKLALIEAAKA----A-KIKRFIFFSILNAEQY 116 (317)
T ss_pred HHHHC-------CCCEEEECCCCCC--C--------CccchhhhhHHHHHHHHHHHHH----c-CCCEEEEecccccccc
Confidence 77664 6899999876421 1 1123556788888777776643 2 2458999987532211
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcc-cc-hhhh------hhhccCCHHHHHHHH
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST-IQ-NKQM------FNIICELPETVARTL 245 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~-~~-~~~~------~~~~~~~pe~~a~~~ 245 (347)
....|..+|...+.+.+ ..|+.+..+.|+.+..++...... .. .... ........+++|+.+
T Consensus 117 ---~~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 186 (317)
T CHL00194 117 ---PYIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFC 186 (317)
T ss_pred ---CCChHHHHHHHHHHHHH-------HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHH
Confidence 22458888888776543 247888889998654332111000 00 0000 001112458999988
Q ss_pred hhhhhhccccc
Q 019009 246 VPRIRVVKGSG 256 (347)
Q Consensus 246 ~~~~~~~~~~~ 256 (347)
...+..+...+
T Consensus 187 ~~~l~~~~~~~ 197 (317)
T CHL00194 187 LKSLSLPETKN 197 (317)
T ss_pred HHHhcCccccC
Confidence 87776554333
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.8e-12 Score=116.93 Aligned_cols=162 Identities=14% Similarity=0.038 Sum_probs=111.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
||||||+|.||.++++.|.++|+ .|++++|..... .+.+ . ....+..|+++.+.+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-----~~~~-----------------~--~~~~~~~d~~~~~~~ 56 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-----KFLN-----------------L--ADLVIADYIDKEDFL 56 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-----hhhh-----------------h--hheeeeccCcchhHH
Confidence 68999999999999999999997 688887754321 1111 0 012456788887776
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
+.+.+. .+.++|++||+|+... .+.++.+..+++|+.++..+++++... +.++|++||.. ...
T Consensus 57 ~~~~~~---~~~~~D~vvh~A~~~~-------~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~v~~SS~~-vy~ 119 (314)
T TIGR02197 57 DRLEKG---AFGKIEAIFHQGACSD-------TTETDGEYMMENNYQYSKRLLDWCAEK------GIPFIYASSAA-TYG 119 (314)
T ss_pred HHHHhh---ccCCCCEEEECccccC-------ccccchHHHHHHHHHHHHHHHHHHHHh------CCcEEEEccHH-hcC
Confidence 665542 3458999999999642 112345678899999999999887542 23799999852 111
Q ss_pred ----------C-CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 174 ----------S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 174 ----------~-~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. ......|+.||.+.+.+++....+. ..++++..+.|+.+..+.
T Consensus 120 ~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~ 174 (314)
T TIGR02197 120 DGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPR 174 (314)
T ss_pred CCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCC
Confidence 0 1134679999999999987643322 125677888887776653
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-11 Score=114.19 Aligned_cols=144 Identities=19% Similarity=0.212 Sum_probs=107.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||||.||.+++++|.++|++|+++.|+ .+|+.+.+++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------------------~~d~~~~~~~ 42 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------------------------QLDLTDPEAL 42 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------------------ccCCCCHHHH
Confidence 47999999999999999999999999998873 3588999998
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC--C
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--G 171 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~--~ 171 (347)
+++++.. .+|++||+||.... . ...+..+..+++|+.++..+.+++.. . +.++|++||... .
T Consensus 43 ~~~~~~~-----~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~Ss~~vy~~ 106 (287)
T TIGR01214 43 ERLLRAI-----RPDAVVNTAAYTDV-D----GAESDPEKAFAVNALAPQNLARAAAR----H--GARLVHISTDYVFDG 106 (287)
T ss_pred HHHHHhC-----CCCEEEECCccccc-c----ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEeeeeeecC
Confidence 8887642 58999999986431 1 11123467789999999999888643 2 247999987521 1
Q ss_pred CC--------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 172 GS--------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 ~~--------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.. +......|+.+|.+.+.+.+.+ +..+..+.|+.+..+.
T Consensus 107 ~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~ 154 (287)
T TIGR01214 107 EGKRPYREDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG 154 (287)
T ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence 00 0112457999999999888754 3577889999887654
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-11 Score=115.22 Aligned_cols=163 Identities=17% Similarity=0.125 Sum_probs=118.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
.||||||+|.||..++++|.++|++|+.++|...+..... ..+.++.+|+++.+.+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------------------~~~~~~~~d~~~~~~~ 57 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------------------SGVEFVVLDLTDRDLV 57 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------------------cccceeeecccchHHH
Confidence 3999999999999999999999999999999776432110 2467788999998555
Q ss_pred HHHHHHHHhhcCCc-cEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 94 QKLSNFAVNEFGSI-DIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~i-D~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
.+.++ .. |++||+|+.... +....+ .....+++|+.++.++.+++.. . ...++|+.||.....
T Consensus 58 ~~~~~-------~~~d~vih~aa~~~~--~~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~-~~~~~v~~ss~~~~~ 121 (314)
T COG0451 58 DELAK-------GVPDAVIHLAAQSSV--PDSNAS--DPAEFLDVNVDGTLNLLEAARA----A-GVKRFVFASSVSVVY 121 (314)
T ss_pred HHHHh-------cCCCEEEEccccCch--hhhhhh--CHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEeCCCceEC
Confidence 55544 23 999999997541 111111 3456899999999999998876 1 356788866542111
Q ss_pred CC----------CCCcc--hhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 173 SS----------TPLTA--VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 173 ~~----------~~~~~--~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
.. .+..+ .|+.+|.+.+.+++.... ..|+.+..+.|+.+-.+..
T Consensus 122 ~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~ 177 (314)
T COG0451 122 GDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGD 177 (314)
T ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCC
Confidence 11 11112 499999999999998888 3578999999988876653
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.6e-11 Score=114.25 Aligned_cols=146 Identities=18% Similarity=0.129 Sum_probs=102.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||+|-||+++++.|.++| +|+.++|... .+..|++|.+.+
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------------------~~~~Dl~d~~~~ 46 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------------------------DYCGDFSNPEGV 46 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------------------cccCCCCCHHHH
Confidence 69999999999999999999999 7888887421 135799999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC--C
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--G 171 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~--~ 171 (347)
.++++.. ++|+|||+|+...+ . ...++-+..+++|+.++.++.+++... +.++|++||... +
T Consensus 47 ~~~~~~~-----~~D~Vih~Aa~~~~-~----~~~~~~~~~~~~N~~~~~~l~~aa~~~------g~~~v~~Ss~~Vy~~ 110 (299)
T PRK09987 47 AETVRKI-----RPDVIVNAAAHTAV-D----KAESEPEFAQLLNATSVEAIAKAANEV------GAWVVHYSTDYVFPG 110 (299)
T ss_pred HHHHHhc-----CCCEEEECCccCCc-c----hhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEccceEECC
Confidence 8887642 68999999997542 1 111223566789999999998887542 247899887421 1
Q ss_pred C--C------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 172 G--S------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 172 ~--~------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
. . +......|+.||.+.+.+++....+ ...+.|+++-.|
T Consensus 111 ~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~-------~~ilR~~~vyGp 157 (299)
T PRK09987 111 TGDIPWQETDATAPLNVYGETKLAGEKALQEHCAK-------HLIFRTSWVYAG 157 (299)
T ss_pred CCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCC-------EEEEecceecCC
Confidence 1 1 1112357999999999988755432 245556655543
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.6e-11 Score=119.91 Aligned_cols=163 Identities=18% Similarity=0.154 Sum_probs=111.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
++++||||||+|.||..++++|+++|++|++++|......+. +.... ...++.++..|+.+.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~---------------~~~~~~~i~~D~~~~ 179 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHF---------------SNPNFELIRHDVVEP 179 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhc---------------cCCceEEEECCccCh
Confidence 458899999999999999999999999999998754321111 11100 123567788898764
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
. + .++|+|||.|+...+ . ... ++....+++|+.++.++.+++... +.++|++||...
T Consensus 180 ~-----l-------~~~D~ViHlAa~~~~-~-~~~---~~p~~~~~~Nv~gt~nLleaa~~~------g~r~V~~SS~~V 236 (442)
T PLN02206 180 I-----L-------LEVDQIYHLACPASP-V-HYK---FNPVKTIKTNVVGTLNMLGLAKRV------GARFLLTSTSEV 236 (442)
T ss_pred h-----h-------cCCCEEEEeeeecch-h-hhh---cCHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECChHH
Confidence 2 1 258999999986432 1 111 123578899999999999887542 237999988621
Q ss_pred -CCC--------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 171 -GGS--------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 171 -~~~--------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
+.. +......|+.+|.+.+.+++.+.++ .|+.+..+.|+.+..+
T Consensus 237 Yg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp 295 (442)
T PLN02206 237 YGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGP 295 (442)
T ss_pred hCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCC
Confidence 100 1112357999999999998877665 3678888888776654
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-11 Score=109.83 Aligned_cols=160 Identities=16% Similarity=0.089 Sum_probs=119.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++||||||++-||.+++.+|.++|+.|++++--.......++.+++... .+..+.++..|++|.+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~--------------~~~~v~f~~~Dl~D~~ 67 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLG--------------EGKSVFFVEGDLNDAE 67 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcC--------------CCCceEEEEeccCCHH
Confidence 58999999999999999999999999999997544433344444444322 2468999999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS- 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~- 170 (347)
.++++++.. ++|.|+|-|+.... ..+.+.-...+..|+.|.+.+......+ +-..+|+.||+..
T Consensus 68 ~L~kvF~~~-----~fd~V~Hfa~~~~v-----geS~~~p~~Y~~nNi~gtlnlLe~~~~~-----~~~~~V~sssatvY 132 (343)
T KOG1371|consen 68 ALEKLFSEV-----KFDAVMHFAALAAV-----GESMENPLSYYHNNIAGTLNLLEVMKAH-----NVKALVFSSSATVY 132 (343)
T ss_pred HHHHHHhhc-----CCceEEeehhhhcc-----chhhhCchhheehhhhhHHHHHHHHHHc-----CCceEEEecceeee
Confidence 999998875 69999999987542 1223344778889999999988765443 2567888887621
Q ss_pred C---------CCCC-CCcchhhhHHHHHHHHHHHHHhHhc
Q 019009 171 G---------GSST-PLTAVYGSTKCGLRQLQASLFKESK 200 (347)
Q Consensus 171 ~---------~~~~-~~~~~Y~asKaal~~~~~~La~el~ 200 (347)
+ ..+. .....|+.+|.+++...+.+.+-+.
T Consensus 133 G~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 133 GLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred cCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence 0 0111 1346899999999999998887654
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.8e-11 Score=113.62 Aligned_cols=149 Identities=13% Similarity=0.019 Sum_probs=107.7
Q ss_pred EEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHHH
Q 019009 16 FSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK 95 (347)
Q Consensus 16 lITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~ 95 (347)
|||||+|.||..+++.|+++|++|+++.+. ..+|++|.+++++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------------------~~~Dl~~~~~l~~ 43 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------------------KELDLTRQADVEA 43 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------------------ccCCCCCHHHHHH
Confidence 699999999999999999999988766421 1479999998888
Q ss_pred HHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-C-CC
Q 019009 96 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-G-GS 173 (347)
Q Consensus 96 ~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~-~-~~ 173 (347)
+++.. ++|+|||+|+... ..... .+.-+..+++|+.++..+++++... +-+++|++||... + ..
T Consensus 44 ~~~~~-----~~d~Vih~A~~~~--~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~~ 109 (306)
T PLN02725 44 FFAKE-----KPTYVILAAAKVG--GIHAN--MTYPADFIRENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKFA 109 (306)
T ss_pred HHhcc-----CCCEEEEeeeeec--ccchh--hhCcHHHHHHHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCCC
Confidence 77652 6899999998742 11111 1122456888999998888887543 2457999987521 1 00
Q ss_pred ------------C-CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 174 ------------S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 174 ------------~-~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
+ .|....|+.||.+.+.+.+.+.++. ++++..+.|+.+..+.
T Consensus 110 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 110 PQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPH 164 (306)
T ss_pred CCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence 0 1112359999999999888877664 6899999999887764
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.3e-11 Score=116.15 Aligned_cols=163 Identities=18% Similarity=0.153 Sum_probs=111.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.++|+||||+|.||..++++|+++|++|++++|...........+. ...++.++..|+.+..
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~------------------~~~~~~~~~~Di~~~~ 181 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF------------------GNPRFELIRHDVVEPI 181 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc------------------cCCceEEEECcccccc
Confidence 3689999999999999999999999999999986432111111110 1125667888887642
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS- 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~- 170 (347)
+ .++|+|||.|+...+ .. ... +-...+++|+.++..+++++... +.++|++||...
T Consensus 182 -----~-------~~~D~ViHlAa~~~~-~~-~~~---~p~~~~~~Nv~gT~nLleaa~~~------g~r~V~~SS~~VY 238 (436)
T PLN02166 182 -----L-------LEVDQIYHLACPASP-VH-YKY---NPVKTIKTNVMGTLNMLGLAKRV------GARFLLTSTSEVY 238 (436)
T ss_pred -----c-------cCCCEEEECceeccc-hh-hcc---CHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECcHHHh
Confidence 1 258999999986432 11 111 23578899999999998887543 237999987521
Q ss_pred CCC--------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 GGS--------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 ~~~--------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
+.. +......|+.+|.+.+.+++.+.+. .++.+..+.|+.+..+.
T Consensus 239 g~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 239 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPR 297 (436)
T ss_pred CCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCC
Confidence 110 1112346999999999999887665 36788888887776653
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=109.71 Aligned_cols=102 Identities=17% Similarity=0.198 Sum_probs=80.1
Q ss_pred CeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGa-s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.+=.||.. |||||+++|+.|+++|++|+++++... +.. . ....+|+++.+
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-----------------~----~~~~~Dv~d~~ 65 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-----------------E----PHPNLSIREIE 65 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-----------------c----cCCcceeecHH
Confidence 34456664 779999999999999999999986311 100 0 02358999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTR 147 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~ 147 (347)
++.++++.+.+.++++|+||||||+.. ..++.+.+.++|++++. .+.|.+++
T Consensus 66 s~~~l~~~v~~~~g~iDiLVnnAgv~d-~~~~~~~s~e~~~~~~~---~~~~~~~~ 117 (227)
T TIGR02114 66 TTKDLLITLKELVQEHDILIHSMAVSD-YTPVYMTDLEQVQASDN---LNEFLSKQ 117 (227)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCEecc-ccchhhCCHHHHhhhcc---hhhhhccc
Confidence 999999999999999999999999876 67888999999998754 45556655
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-10 Score=120.73 Aligned_cols=130 Identities=16% Similarity=0.160 Sum_probs=100.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++||||+|+||.+++++|+++|++|++++|+.... ....+.++.+|++|.+++
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--------------------------~~~~v~~v~gDL~D~~~l 55 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--------------------------WPSSADFIAADIRDATAV 55 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--------------------------cccCceEEEeeCCCHHHH
Confidence 689999999999999999999999999999975321 012466889999999998
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
.++++ ++|++||+|+... + .+++|+.++.++++++ ++. +.++||++||. .
T Consensus 56 ~~al~-------~vD~VVHlAa~~~---~-----------~~~vNv~GT~nLLeAa----~~~-gvkr~V~iSS~-~--- 105 (854)
T PRK05865 56 ESAMT-------GADVVAHCAWVRG---R-----------NDHINIDGTANVLKAM----AET-GTGRIVFTSSG-H--- 105 (854)
T ss_pred HHHHh-------CCCEEEECCCccc---c-----------hHHHHHHHHHHHHHHH----HHc-CCCeEEEECCc-H---
Confidence 88765 5899999998532 1 3578998887766554 443 35689999875 1
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
|.+.+.+.+ + .|+.+..+.|+.+..+
T Consensus 106 -----------K~aaE~ll~----~---~gl~~vILRp~~VYGP 131 (854)
T PRK05865 106 -----------QPRVEQMLA----D---CGLEWVAVRCALIFGR 131 (854)
T ss_pred -----------HHHHHHHHH----H---cCCCEEEEEeceEeCC
Confidence 777776553 2 4789999999988765
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.8e-11 Score=107.46 Aligned_cols=173 Identities=19% Similarity=0.218 Sum_probs=98.9
Q ss_pred EEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH---
Q 019009 17 SVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA--- 91 (347)
Q Consensus 17 ITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~--- 91 (347)
||||||.||..+.++|++++. +|++..|..... +..+.+.+.......... .......++.++..|++++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~-~~~~rl~~~l~~~~~~~~---~~~~~~~ri~~v~GDl~~~~lGL 76 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ-SALERLKDALKEYGLWDD---LDKEALSRIEVVEGDLSQPNLGL 76 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH-HHHHHHHGGG-SS-HHHH---H-HHHTTTEEEEE--TTSGGGG-
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc-cchhhhhhhcccccchhh---hhhhhhccEEEEeccccccccCC
Confidence 799999999999999999986 999999976431 222233221100000000 00002468999999999864
Q ss_pred ---HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 92 ---DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 92 ---~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.+.+.+ .+|++||||+... +. ..++...++|+.|+..+++.+.. . +..++++|||.
T Consensus 77 ~~~~~~~L~~-------~v~~IiH~Aa~v~----~~----~~~~~~~~~NV~gt~~ll~la~~----~-~~~~~~~iSTa 136 (249)
T PF07993_consen 77 SDEDYQELAE-------EVDVIIHCAASVN----FN----APYSELRAVNVDGTRNLLRLAAQ----G-KRKRFHYISTA 136 (249)
T ss_dssp -HHHHHHHHH-------H--EEEE--SS-S----BS-----S--EEHHHHHHHHHHHHHHHTS----S-S---EEEEEEG
T ss_pred ChHHhhcccc-------ccceeeecchhhh----hc----ccchhhhhhHHHHHHHHHHHHHh----c-cCcceEEeccc
Confidence 3333332 4899999998643 11 13455788999999998888752 1 23489999984
Q ss_pred CCC-CCC------------------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccC
Q 019009 169 GSG-GSS------------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216 (347)
Q Consensus 169 ~~~-~~~------------------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T 216 (347)
... ... ......|..||...+.+.+..+.+ .|+.+..+.||.|-.
T Consensus 137 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 137 YVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG 200 (249)
T ss_dssp GGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred cccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence 211 111 122357999999999999988876 478899999999876
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.6e-10 Score=116.19 Aligned_cols=164 Identities=20% Similarity=0.179 Sum_probs=110.3
Q ss_pred eEEEEcCCChHHHHHHHHHH--HCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFL--LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la--~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+||||||||.||.+++++|+ .+|++|++++|+.... ..+.+.... ...++.++.+|++|++
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~--~~~~~~~~~---------------~~~~v~~~~~Dl~~~~ 64 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS--RLEALAAYW---------------GADRVVPLVGDLTEPG 64 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHH--HHHHHHHhc---------------CCCcEEEEecccCCcc
Confidence 69999999999999999999 5899999999975421 111221110 1136788999999853
Q ss_pred HH--HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 92 DV--QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 92 ~v--~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.. ....+.+ .++|++||+||.... . .+ .....++|+.++..+.+++.. . +..++|++||..
T Consensus 65 ~~~~~~~~~~l----~~~D~Vih~Aa~~~~-~----~~---~~~~~~~nv~gt~~ll~~a~~----~-~~~~~v~~SS~~ 127 (657)
T PRK07201 65 LGLSEADIAEL----GDIDHVVHLAAIYDL-T----AD---EEAQRAANVDGTRNVVELAER----L-QAATFHHVSSIA 127 (657)
T ss_pred CCcCHHHHHHh----cCCCEEEECceeecC-C----CC---HHHHHHHHhHHHHHHHHHHHh----c-CCCeEEEEeccc
Confidence 10 1111222 379999999997431 1 12 245678899998888877643 2 246799998863
Q ss_pred CCC-C-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 170 SGG-S-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 170 ~~~-~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
... . +.+....|+.+|...+.+.+. ..|+.+..+.|+.|..+
T Consensus 128 v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~ 181 (657)
T PRK07201 128 VAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD 181 (657)
T ss_pred cccCccCccccccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence 211 0 011225699999999988753 24789999999998654
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.8e-09 Score=88.42 Aligned_cols=180 Identities=16% Similarity=0.101 Sum_probs=128.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++|+|-|+-+.+|.+++..|-.+++-|.-++-.+.. ....-..+..|-+=.|+
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe---------------------------~Ad~sI~V~~~~swtEQ 56 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE---------------------------QADSSILVDGNKSWTEQ 56 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc---------------------------cccceEEecCCcchhHH
Confidence 578999999999999999999999988877654321 01123345555555566
Q ss_pred HHHHHHHHHhhc--CCccEEEEcCCCCCCCCCCCCCC-HHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 93 VQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLLQFT-NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 93 v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~~~~~-~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
-+.+.+++-+.. .++|.+++-||.... +....-+ ...-+-++...++....-.+.+-.+|+ .|-++.++...
T Consensus 57 e~~v~~~vg~sL~gekvDav~CVAGGWAG-GnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK----~GGLL~LtGAk 131 (236)
T KOG4022|consen 57 EQSVLEQVGSSLQGEKVDAVFCVAGGWAG-GNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK----PGGLLQLTGAK 131 (236)
T ss_pred HHHHHHHHHHhhcccccceEEEeeccccC-CCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC----CCceeeecccc
Confidence 666666665543 369999999998652 2211111 123345666666666666677777775 34467777666
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccccCcc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGST 224 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~~~~ 224 (347)
++..+.|++..|+++|+|+++++++|+.+-. +.|--+.+|.|=..+|||..+..+
T Consensus 132 aAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP 188 (236)
T KOG4022|consen 132 AALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMP 188 (236)
T ss_pred cccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCC
Confidence 7788999999999999999999999998854 467788999999999999766443
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.8e-09 Score=92.45 Aligned_cols=164 Identities=12% Similarity=0.107 Sum_probs=110.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++||||| |+|.++++.|+++|++|++++|++++.+.....+.. ..++.++.+|++|.+++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~------------------~~~i~~~~~Dv~d~~sv 62 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT------------------PESITPLPLDYHDDDAL 62 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc------------------CCcEEEEEccCCCHHHH
Confidence 68999998 888889999999999999999998776655443321 24678899999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
+++++.+.++++++|++|+..-.. ++-.+.+++-..=.+. +.-+++.+=++.+..
T Consensus 63 ~~~i~~~l~~~g~id~lv~~vh~~-----------------------~~~~~~~~~~~~gv~~-~~~~~~h~~gs~~~~- 117 (177)
T PRK08309 63 KLAIKSTIEKNGPFDLAVAWIHSS-----------------------AKDALSVVCRELDGSS-ETYRLFHVLGSAASD- 117 (177)
T ss_pred HHHHHHHHHHcCCCeEEEEecccc-----------------------chhhHHHHHHHHccCC-CCceEEEEeCCcCCc-
Confidence 999999999999999999877432 1222223332221111 233677764331211
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhc
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~ 252 (347)
+ +.-+..+...++...-|.-|++..+-..+.. +-+++++.++.+++..
T Consensus 118 --~----------------~~~~~~~~~~~~~~~~i~lgf~~~~~~~rwl-------------t~~ei~~gv~~~~~~~ 165 (177)
T PRK08309 118 --P----------------RIPSEKIGPARCSYRRVILGFVLEDTYSRWL-------------THEEISDGVIKAIESD 165 (177)
T ss_pred --h----------------hhhhhhhhhcCCceEEEEEeEEEeCCccccC-------------chHHHHHHHHHHHhcC
Confidence 1 1222233334567777888998765432222 5688888888888654
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.2e-10 Score=110.29 Aligned_cols=187 Identities=18% Similarity=0.160 Sum_probs=117.1
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChhH--HH-HHHHHHHHH-hhhhhhhcCCCCcccccCcee
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSG---DRVVVASRSSES--VR-MTVTELEEN-LKEGMMAAGGSSKKNLVHAKV 80 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G---~~Vil~~R~~~~--l~-~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 80 (347)
.|-.||+|+||||||.||+.+++.|++.+ .+|++..|..+. .+ ....++.+. ..+......+.........++
T Consensus 7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 45567999999999999999999999865 368888886531 11 111121110 000000000000000012478
Q ss_pred eEEecCCCCH-------HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHh
Q 019009 81 AGIACDVCEP-------ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM 153 (347)
Q Consensus 81 ~~~~~Dls~~-------~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l 153 (347)
.++..|++++ +.++++++ .+|+|||+|+... +. +..+..+++|+.|+..+.+++...-
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~----~~----~~~~~~~~~Nv~gt~~ll~~a~~~~ 151 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN----FD----ERYDVALGINTLGALNVLNFAKKCV 151 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC----Cc----CCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999843 33444433 5899999998643 11 2457789999999999988875421
Q ss_pred HcCCCCcEEEEEcCCCC-CCCC-------CC-------------------------------------------------
Q 019009 154 RDQPKGGHIFNMDGAGS-GGSS-------TP------------------------------------------------- 176 (347)
Q Consensus 154 ~~~~~~g~Iv~vsS~~~-~~~~-------~~------------------------------------------------- 176 (347)
+-.++|++||... +... ++
T Consensus 152 ----~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (491)
T PLN02996 152 ----KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERA 227 (491)
T ss_pred ----CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHH
Confidence 2347889887521 1100 00
Q ss_pred ----CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 177 ----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 177 ----~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
....|+.||++.+.+++..+ .|+.+..+.|+.|-.+.
T Consensus 228 ~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~ 268 (491)
T PLN02996 228 KLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTY 268 (491)
T ss_pred HhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCC
Confidence 11359999999999986542 27899999999997764
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-09 Score=101.08 Aligned_cols=133 Identities=14% Similarity=0.060 Sum_probs=87.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.+++|||||+|.||..+++.|+++|++|++..+ |+.+.+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-----------------------------------------~~~~~~ 47 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-----------------------------------------RLENRA 47 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-----------------------------------------ccCCHH
Confidence 478999999999999999999999999875322 233444
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
.+...++. .++|++||+||.... +-.+...++-...+++|+.++.++++++... +-.++++.|+...+
T Consensus 48 ~v~~~l~~-----~~~D~ViH~Aa~~~~--~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv~~v~~sS~~vy~ 115 (298)
T PLN02778 48 SLEADIDA-----VKPTHVFNAAGVTGR--PNVDWCESHKVETIRANVVGTLTLADVCRER-----GLVLTNYATGCIFE 115 (298)
T ss_pred HHHHHHHh-----cCCCEEEECCcccCC--CCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEecceEeC
Confidence 44444432 168999999997531 1111122344678999999999999988653 12244443332111
Q ss_pred C--------------C--CCCCcchhhhHHHHHHHHHHHHHh
Q 019009 172 G--------------S--STPLTAVYGSTKCGLRQLQASLFK 197 (347)
Q Consensus 172 ~--------------~--~~~~~~~Y~asKaal~~~~~~La~ 197 (347)
. . +.+....|+.||.+.+.+++.++.
T Consensus 116 ~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~ 157 (298)
T PLN02778 116 YDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN 157 (298)
T ss_pred CCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence 1 0 111235799999999999987653
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-09 Score=99.35 Aligned_cols=183 Identities=13% Similarity=-0.004 Sum_probs=111.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++||||||.||+.++++|+++|++|.+..|++++.. ...+..+.+|+.|.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------------------~~~~~~~~~d~~d~~~l 54 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------------------GPNEKHVKFDWLDEDTW 54 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------------------CCCCccccccCCCHHHH
Confidence 4899999999999999999999999999999987531 01344567899999999
Q ss_pred HHHHHHHHhhcCC-ccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 94 QKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~-iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
.++++.. +.+.+ +|.++++++... +..+ ..+.++..+++. +-.+||++||.+. .
T Consensus 55 ~~a~~~~-~~~~g~~d~v~~~~~~~~----------~~~~------------~~~~~i~aa~~~-gv~~~V~~Ss~~~-~ 109 (285)
T TIGR03649 55 DNPFSSD-DGMEPEISAVYLVAPPIP----------DLAP------------PMIKFIDFARSK-GVRRFVLLSASII-E 109 (285)
T ss_pred HHHHhcc-cCcCCceeEEEEeCCCCC----------ChhH------------HHHHHHHHHHHc-CCCEEEEeecccc-C
Confidence 9887643 22335 999999886421 0001 112344555555 3568999987532 2
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCc-c-cc--hh-----hhhhhccCCHHHHHH
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS-T-IQ--NK-----QMFNIICELPETVAR 243 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~-~-~~--~~-----~~~~~~~~~pe~~a~ 243 (347)
.+. ..+...+.+.+. ..|+....+.|+++..++..... . .. .. .-........+++|+
T Consensus 110 ~~~-------~~~~~~~~~l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~ 176 (285)
T TIGR03649 110 KGG-------PAMGQVHAHLDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIAR 176 (285)
T ss_pred CCC-------chHHHHHHHHHh------ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHH
Confidence 111 122222222221 13899999999987655421100 0 00 00 001122346789999
Q ss_pred HHhhhhhhcccccccee
Q 019009 244 TLVPRIRVVKGSGKAIN 260 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~ 260 (347)
.+...+..+...+....
T Consensus 177 ~~~~~l~~~~~~~~~~~ 193 (285)
T TIGR03649 177 VAYRALTDKVAPNTDYV 193 (285)
T ss_pred HHHHHhcCCCcCCCeEE
Confidence 88877776544444333
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.6e-10 Score=102.65 Aligned_cols=143 Identities=22% Similarity=0.215 Sum_probs=99.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||+|-||.++.+.|.++|++|+.++|+ .+|++|.+++
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------------------~~dl~d~~~~ 43 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS--------------------------------------DLDLTDPEAV 43 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------------------CS-TTSHHHH
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------------------hcCCCCHHHH
Confidence 68999999999999999999999999998773 4699999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC--CC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SG 171 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~--~~ 171 (347)
.++++.. ++|++||+||+..+ +.-.++-+..+.+|+.++..+.+.+.. .+.++|++||.. .+
T Consensus 44 ~~~~~~~-----~pd~Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~------~~~~li~~STd~VFdG 107 (286)
T PF04321_consen 44 AKLLEAF-----KPDVVINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKE------RGARLIHISTDYVFDG 107 (286)
T ss_dssp HHHHHHH-------SEEEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHH------CT-EEEEEEEGGGS-S
T ss_pred HHHHHHh-----CCCeEeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHH------cCCcEEEeeccEEEcC
Confidence 9998776 69999999997531 122234567899999999999988864 256899999841 12
Q ss_pred CCCC--------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 172 GSST--------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 172 ~~~~--------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
..+. .....|+.+|...+...+... + +...+.++++-.+
T Consensus 108 ~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~----~---~~~IlR~~~~~g~ 154 (286)
T PF04321_consen 108 DKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC----P---NALILRTSWVYGP 154 (286)
T ss_dssp STSSSB-TTS----SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEESS
T ss_pred CcccccccCCCCCCCCHHHHHHHHHHHHHHHhc----C---CEEEEecceeccc
Confidence 2111 123689999999998877522 1 4556677776555
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.6e-09 Score=98.20 Aligned_cols=127 Identities=20% Similarity=0.208 Sum_probs=99.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
+||||++|-+|.++.+.|. .+..|+.++|. .+|++|.+.+.
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~--------------------------------------~~Ditd~~~v~ 43 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRA--------------------------------------ELDITDPDAVL 43 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCc--------------------------------------cccccChHHHH
Confidence 8999999999999999998 66899988762 27999999999
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC--CCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SGG 172 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~--~~~ 172 (347)
+++++. ++|++||+|++.... .-..+-+..+.+|..|+.++.+++-.. +..+|++|+-. .|.
T Consensus 44 ~~i~~~-----~PDvVIn~AAyt~vD-----~aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTDyVFDG~ 107 (281)
T COG1091 44 EVIRET-----RPDVVINAAAYTAVD-----KAESEPELAFAVNATGAENLARAAAEV------GARLVHISTDYVFDGE 107 (281)
T ss_pred HHHHhh-----CCCEEEECccccccc-----cccCCHHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecceEecCC
Confidence 999876 799999999986531 122235788999999999999998653 67899998631 122
Q ss_pred CC--------CCCcchhhhHHHHHHHHHHHHH
Q 019009 173 SS--------TPLTAVYGSTKCGLRQLQASLF 196 (347)
Q Consensus 173 ~~--------~~~~~~Y~asKaal~~~~~~La 196 (347)
.+ ......||.||.+-+..++...
T Consensus 108 ~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 108 KGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG 139 (281)
T ss_pred CCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence 22 1234689999999999887554
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.6e-09 Score=97.66 Aligned_cols=174 Identities=21% Similarity=0.231 Sum_probs=117.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH-
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP- 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~- 90 (347)
+++++|||||.||..+..+|+.+= ++|+...|-.. .|.+.+.|++.... -..+......++..+..|++.+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s-~E~a~~RL~~~~~~------~~~~~e~~~~ri~vv~gDl~e~~ 73 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQS-DEAALARLEKTFDL------YRHWDELSADRVEVVAGDLAEPD 73 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCC-HHHHHHHHHHHhhh------hhhhhhhhcceEEEEeccccccc
Confidence 579999999999999999998764 68988877433 22233344433220 0001111457899999999943
Q ss_pred -----HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 91 -----ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 91 -----~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
...+++.+ .+|.+|||+....... .+.+....|+.|+..+++.+.-. +...+.+|
T Consensus 74 lGL~~~~~~~La~-------~vD~I~H~gA~Vn~v~--------pYs~L~~~NVlGT~evlrLa~~g-----k~Kp~~yV 133 (382)
T COG3320 74 LGLSERTWQELAE-------NVDLIIHNAALVNHVF--------PYSELRGANVLGTAEVLRLAATG-----KPKPLHYV 133 (382)
T ss_pred CCCCHHHHHHHhh-------hcceEEecchhhcccC--------cHHHhcCcchHhHHHHHHHHhcC-----CCceeEEE
Confidence 33444443 5899999998654222 35677788999999988877432 34458999
Q ss_pred cCCCCCCC-------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 166 DGAGSGGS-------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 166 sS~~~~~~-------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
||++.+.. .......|+.||.+.+.+++.... .|+++..+.||+|-.+
T Consensus 134 Ssisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gd 200 (382)
T COG3320 134 SSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGD 200 (382)
T ss_pred eeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeecc
Confidence 98743211 111236799999999998875544 4899999999999654
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.9e-09 Score=101.00 Aligned_cols=172 Identities=12% Similarity=0.094 Sum_probs=122.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..+.+++||||+|.+|+.++++|.++| .+|.+.+..+...+-..++... ...++.++.+|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-----------------~~~~v~~~~~D~ 64 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-----------------RSGRVTVILGDL 64 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-----------------cCCceeEEecch
Confidence 346899999999999999999999999 7899998876521111111110 246788999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
.|..++.+.++ +. .+||+|....+ ..-..+-+..+++|+.|+-+++.++... +-.++|++||
T Consensus 65 ~~~~~i~~a~~-------~~-~Vvh~aa~~~~-----~~~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs 126 (361)
T KOG1430|consen 65 LDANSISNAFQ-------GA-VVVHCAASPVP-----DFVENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSS 126 (361)
T ss_pred hhhhhhhhhcc-------Cc-eEEEeccccCc-----cccccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecC
Confidence 99988888765 55 67777754331 2222256788999999988888877654 4567888888
Q ss_pred CCCC-----------CCCCCCc--chhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 168 AGSG-----------GSSTPLT--AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 168 ~~~~-----------~~~~~~~--~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
.... ..+.|.. -.|+.||+--+.+++.... ..+....++.|-.|-.|.-
T Consensus 127 ~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd 188 (361)
T KOG1430|consen 127 AYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGD 188 (361)
T ss_pred ceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCC
Confidence 6321 1223322 4899999999999876665 3467888999988877653
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.6e-09 Score=96.07 Aligned_cols=157 Identities=16% Similarity=0.104 Sum_probs=92.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
||||||+|.||.++++.|+++|++|++++|++++..... . .. ..|+.. +..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-------------------~~----~~~~~~-~~~- 51 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W-------------------EG----YKPWAP-LAE- 51 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c-------------------ee----eecccc-cch-
Confidence 689999999999999999999999999999876532110 0 00 112221 111
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-CcEEEEEcCCC-CCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAG-SGG 172 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~g~Iv~vsS~~-~~~ 172 (347)
.+.+.++|+|||+||.... ....+.+..+..+++|+.++..+.+++... +. ..++|..|+.. .+.
T Consensus 52 ------~~~~~~~D~Vvh~a~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~~i~~S~~~~yg~ 118 (292)
T TIGR01777 52 ------SEALEGADAVINLAGEPIA---DKRWTEERKQEIRDSRIDTTRALVEAIAAA----EQKPKVFISASAVGYYGT 118 (292)
T ss_pred ------hhhcCCCCEEEECCCCCcc---cccCCHHHHHHHHhcccHHHHHHHHHHHhc----CCCceEEEEeeeEEEeCC
Confidence 1233579999999996431 122344566778899999887777776432 11 12344444321 011
Q ss_pred C---CC-----C-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 173 S---ST-----P-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 173 ~---~~-----~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
. .. + ....|+..+...+...+ .+...++.+..+.|+.+..+
T Consensus 119 ~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~ 168 (292)
T TIGR01777 119 SEDRVFTEEDSPAGDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGP 168 (292)
T ss_pred CCCCCcCcccCCCCCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECC
Confidence 0 00 1 11123333333333222 23345799999999999765
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.4e-08 Score=100.43 Aligned_cols=142 Identities=16% Similarity=0.228 Sum_probs=89.3
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChhH--HHHHH-HHHHH-HhhhhhhhcCCCCcccccCcee
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD---RVVVASRSSES--VRMTV-TELEE-NLKEGMMAAGGSSKKNLVHAKV 80 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~---~Vil~~R~~~~--l~~~~-~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (347)
.|-.+|+|+||||||.||+.++++|++.+. +|++..|.... .++.. +++.+ ...+......+.........++
T Consensus 115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki 194 (605)
T PLN02503 115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL 194 (605)
T ss_pred hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence 345689999999999999999999998763 68888885432 22222 12211 0000000000000111113578
Q ss_pred eEEecCCCCHH------HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhH
Q 019009 81 AGIACDVCEPA------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR 154 (347)
Q Consensus 81 ~~~~~Dls~~~------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~ 154 (347)
.++..|+++++ ..+.+.+ .+|++||+|+... +. +..+..+++|+.|+..+++.+...-
T Consensus 195 ~~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~----f~----~~~~~a~~vNV~GT~nLLelA~~~~- 258 (605)
T PLN02503 195 VPVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTT----FD----ERYDVAIDINTRGPCHLMSFAKKCK- 258 (605)
T ss_pred EEEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccc----cc----cCHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 99999999873 3333322 5899999998643 11 3467789999999999998875431
Q ss_pred cCCCCcEEEEEcCC
Q 019009 155 DQPKGGHIFNMDGA 168 (347)
Q Consensus 155 ~~~~~g~Iv~vsS~ 168 (347)
...++|++||.
T Consensus 259 ---~lk~fV~vSTa 269 (605)
T PLN02503 259 ---KLKLFLQVSTA 269 (605)
T ss_pred ---CCCeEEEccCc
Confidence 23468888875
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.88 E-value=9.9e-08 Score=106.16 Aligned_cols=175 Identities=16% Similarity=0.168 Sum_probs=113.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G----~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.++|+||||+|.||..++++|+++| .+|+...|+..... ..+.+.+...... .+......++.++..|+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~-~~~~l~~~~~~~~------~~~~~~~~~i~~~~gDl 1043 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEA-GLERLRKTGTTYG------IWDEEWASRIEVVLGDL 1043 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHH-HHHHHHHHHHHhC------CCchhhhcceEEEeccC
Confidence 4799999999999999999999987 78998889754322 2233322111100 00000123688899999
Q ss_pred CCH------HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 88 CEP------ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 88 s~~------~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
+++ +....+. ..+|++||||+... + ..+ +.....+|+.|+..+++.+.. . +..+
T Consensus 1044 ~~~~lgl~~~~~~~l~-------~~~d~iiH~Aa~~~----~-~~~---~~~~~~~nv~gt~~ll~~a~~----~-~~~~ 1103 (1389)
T TIGR03443 1044 SKEKFGLSDEKWSDLT-------NEVDVIIHNGALVH----W-VYP---YSKLRDANVIGTINVLNLCAE----G-KAKQ 1103 (1389)
T ss_pred CCccCCcCHHHHHHHH-------hcCCEEEECCcEec----C-ccC---HHHHHHhHHHHHHHHHHHHHh----C-CCce
Confidence 854 2222221 36899999998643 1 122 334556799999998887643 2 2457
Q ss_pred EEEEcCCCCCC----------------CCCC-----------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc
Q 019009 162 IFNMDGAGSGG----------------SSTP-----------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV 214 (347)
Q Consensus 162 Iv~vsS~~~~~----------------~~~~-----------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v 214 (347)
++++||..... .+.+ ....|+.||.+.+.+++..+. .|+.+..+.||.|
T Consensus 1104 ~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v 1179 (1389)
T TIGR03443 1104 FSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYV 1179 (1389)
T ss_pred EEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCcc
Confidence 99999852210 0000 123599999999998876543 4899999999999
Q ss_pred cCc
Q 019009 215 LTD 217 (347)
Q Consensus 215 ~T~ 217 (347)
..+
T Consensus 1180 ~G~ 1182 (1389)
T TIGR03443 1180 TGD 1182 (1389)
T ss_pred ccC
Confidence 655
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.6e-08 Score=99.75 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=96.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+++|||||+|-||+++++.|.++|++|... ..|++|.+.
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------------------~~~l~d~~~ 419 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------------------KGRLEDRSS 419 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCCCeEEee-----------------------------------------ccccccHHH
Confidence 579999999999999999999999887311 135777777
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-C
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-G 171 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~-~ 171 (347)
+.+.++.. ++|+|||+|+.... +-.+...++-+..+++|+.++.++++++... +.+.|++||... +
T Consensus 420 v~~~i~~~-----~pd~Vih~Aa~~~~--~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~------g~~~v~~Ss~~v~~ 486 (668)
T PLN02260 420 LLADIRNV-----KPTHVFNAAGVTGR--PNVDWCESHKVETIRANVVGTLTLADVCREN------GLLMMNFATGCIFE 486 (668)
T ss_pred HHHHHHhh-----CCCEEEECCcccCC--CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc------CCeEEEEcccceec
Confidence 77766543 68999999997531 1112223445788999999999999998653 223555544211 1
Q ss_pred -------C--CC-------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEee
Q 019009 172 -------G--SS-------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS 210 (347)
Q Consensus 172 -------~--~~-------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~ 210 (347)
. .+ .+....|+.||.+.+.+++.+.. ...+|+..+.
T Consensus 487 ~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~ 538 (668)
T PLN02260 487 YDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI 538 (668)
T ss_pred CCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence 0 01 12236799999999999987642 2356666555
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.4e-08 Score=98.15 Aligned_cols=135 Identities=13% Similarity=0.027 Sum_probs=94.9
Q ss_pred CCcccCCCeEE----EEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 6 DEHWSCTCRWF----SVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 6 ~~~~~~~k~vl----ITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
..++..|..++ |+||++|+|.++++.|...|++|+.+.+.+.+..
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~------------------------------- 76 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA------------------------------- 76 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc-------------------------------
Confidence 46777777777 9999999999999999999999998876543110
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
.....+++.+|..+-.. .+.+++. +.+.+++.+++.|. .+|+
T Consensus 77 -------------------~~~~~~~~~~~~d~~~~--------~~~~~l~--------~~~~~~~~~l~~l~---~~gr 118 (450)
T PRK08261 77 -------------------AGWGDRFGALVFDATGI--------TDPADLK--------ALYEFFHPVLRSLA---PCGR 118 (450)
T ss_pred -------------------cCcCCcccEEEEECCCC--------CCHHHHH--------HHHHHHHHHHHhcc---CCCE
Confidence 00012344444333110 1123222 34466777888875 3679
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV 214 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v 214 (347)
||+++|. ... .....|+++|+++.+|+++|++|+ +.||++++|.|++.
T Consensus 119 iv~i~s~-~~~---~~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~~ 166 (450)
T PRK08261 119 VVVLGRP-PEA---AADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAPG 166 (450)
T ss_pred EEEEccc-ccc---CCchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCCC
Confidence 9999876 232 234579999999999999999999 67999999999863
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-08 Score=90.76 Aligned_cols=175 Identities=15% Similarity=0.060 Sum_probs=123.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++||||-||-=|..+|+.|++.|+.|+.+.|.....+...-.|.+ .++....++..+.+|++|..
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~-------------~~~~~~~~l~l~~gDLtD~~ 68 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYE-------------DPHLNDPRLHLHYGDLTDSS 68 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecc-------------ccccCCceeEEEeccccchH
Confidence 69999999999999999999999999999998864322111001111 11223456889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC-C
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG-S 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~-~ 170 (347)
.+.++++.+ .+|-+.|-|+.+.. ..+.|.-+.+.+++..|++++..+..-+- . +..++..-||+- -
T Consensus 69 ~l~r~l~~v-----~PdEIYNLaAQS~V-----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~--~~~rfYQAStSE~f 135 (345)
T COG1089 69 NLLRILEEV-----QPDEIYNLAAQSHV-----GVSFEQPEYTADVDAIGTLRLLEAIRILG-E--KKTRFYQASTSELY 135 (345)
T ss_pred HHHHHHHhc-----Cchhheeccccccc-----cccccCcceeeeechhHHHHHHHHHHHhC-C--cccEEEecccHHhh
Confidence 999999887 78999998876542 34444456788899999999988775432 1 245666665541 1
Q ss_pred C---------CCCCCCcchhhhHHHHHHHHHHHHHhHhc---CCCeEEEEeeCC
Q 019009 171 G---------GSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPG 212 (347)
Q Consensus 171 ~---------~~~~~~~~~Y~asKaal~~~~~~La~el~---~~gI~v~~i~PG 212 (347)
| ..+.-..++|+++|....-++...+..|. -.||-+|.=.|.
T Consensus 136 G~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~ 189 (345)
T COG1089 136 GLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL 189 (345)
T ss_pred cCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence 1 12333457899999999998888887764 346777765553
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.82 E-value=5e-07 Score=88.22 Aligned_cols=219 Identities=14% Similarity=0.078 Sum_probs=138.8
Q ss_pred CCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTR-GLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~-GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|++|||||+. -||.+++..|++.|++||++..+-. .-.+..+.|-..+.. .+..+..++.++++
T Consensus 396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~-------------~ga~LwvVpaN~~S 462 (866)
T COG4982 396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHAR-------------YGAALWVVPANMGS 462 (866)
T ss_pred cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCC-------------CCceEEEEeccccc
Confidence 59999999984 5999999999999999999865433 333444555443322 56788999999999
Q ss_pred HHHHHHHHHHHHhhcC--------------CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHc
Q 019009 90 PADVQKLSNFAVNEFG--------------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD 155 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g--------------~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~ 155 (347)
..+|+.+++.|-.+.- .+|.+|--|.... .+.+.+.... -+..+++-+.....++-.+.+.-..
T Consensus 463 ysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~ 540 (866)
T COG4982 463 YSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSS 540 (866)
T ss_pred hhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCc-cCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccc
Confidence 9999999999964321 2677887777655 3555555542 3555666666666666665554333
Q ss_pred CCC--CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc-CCCeEEEEeeCCccc-CcccccCccc-chhhh
Q 019009 156 QPK--GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMVL-TDLLLSGSTI-QNKQM 230 (347)
Q Consensus 156 ~~~--~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~-~~gI~v~~i~PG~v~-T~~~~~~~~~-~~~~~ 230 (347)
++- +-+||.=.|...+ .+.+.++|+-||++++.+..-+..|-. ..-+.+..-.-||++ |.++...... ..-..
T Consensus 541 r~v~~R~hVVLPgSPNrG--~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk 618 (866)
T COG4982 541 RGVDTRLHVVLPGSPNRG--MFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAIEK 618 (866)
T ss_pred cCcccceEEEecCCCCCC--ccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHHHH
Confidence 321 2355555554222 234668999999999999987777642 112555566678987 4444332211 11111
Q ss_pred hhhccCCHHHHHHHHhh
Q 019009 231 FNIICELPETVARTLVP 247 (347)
Q Consensus 231 ~~~~~~~pe~~a~~~~~ 247 (347)
......++++.|..++.
T Consensus 619 ~GV~tyS~~EmA~~LLg 635 (866)
T COG4982 619 AGVRTYSTDEMAFNLLG 635 (866)
T ss_pred hCceecCHHHHHHHHHh
Confidence 22233456666655553
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.6e-08 Score=95.66 Aligned_cols=77 Identities=22% Similarity=0.210 Sum_probs=60.5
Q ss_pred CCCeEEEEcC---------------CCh-HHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 019009 11 CTCRWFSVVS---------------TRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74 (347)
Q Consensus 11 ~~k~vlITGa---------------s~G-IG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 74 (347)
.||++||||| |+| +|+++|++|+++|++|++++++.+ ++ .
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~---------------- 242 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T---------------- 242 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C----------------
Confidence 5799999999 455 999999999999999999998752 10 0
Q ss_pred ccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 75 ~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
. .. ...+|+++.+++.+.++ +.++++|++|||||+..
T Consensus 243 -~-~~--~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 243 -P-AG--VKRIDVESAQEMLDAVL---AALPQADIFIMAAAVAD 279 (399)
T ss_pred -C-CC--cEEEccCCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence 0 11 24579999888777665 55788999999999865
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.4e-08 Score=86.85 Aligned_cols=196 Identities=18% Similarity=0.129 Sum_probs=113.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
|+|||||+-||++++..|.+.|++|+++.|++.+.+.. +... +...+.+.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~---------------------------~~~~---v~~~~~~~ 50 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN---------------------------LHPN---VTLWEGLA 50 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh---------------------------cCcc---ccccchhh
Confidence 58999999999999999999999999999998764321 1111 11112222
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS 174 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~ 174 (347)
...+ .++|+|||-||.+.. .. ..+.+.=+..+ .+-+..|+.+.....+.+.+.++.+-+|+ .+..+
T Consensus 51 ~~~~------~~~DavINLAG~~I~-~r--rWt~~~K~~i~----~SRi~~T~~L~e~I~~~~~~P~~~isaSA-vGyYG 116 (297)
T COG1090 51 DALT------LGIDAVINLAGEPIA-ER--RWTEKQKEEIR----QSRINTTEKLVELIAASETKPKVLISASA-VGYYG 116 (297)
T ss_pred hccc------CCCCEEEECCCCccc-cc--cCCHHHHHHHH----HHHhHHHHHHHHHHHhccCCCcEEEecce-EEEec
Confidence 2211 169999999997652 22 13333333333 36677778888877755445555444444 45555
Q ss_pred CCCcchhhhHH----HHHHHHHHHHHhHh---cCCCeEEEEeeCCcccCcc---cccCccc----------chhhhhhhc
Q 019009 175 TPLTAVYGSTK----CGLRQLQASLFKES---KRSKVGVHTASPGMVLTDL---LLSGSTI----------QNKQMFNII 234 (347)
Q Consensus 175 ~~~~~~Y~asK----aal~~~~~~La~el---~~~gI~v~~i~PG~v~T~~---~~~~~~~----------~~~~~~~~~ 234 (347)
......|.-.. -.+..+++.+-.|- ...|+||..+.-|.|..+- +....+. ..++++ .
T Consensus 117 ~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~--S 194 (297)
T COG1090 117 HSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWF--S 194 (297)
T ss_pred CCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCcee--e
Confidence 44443333222 23444444433332 2468999999999987642 1111110 111111 1
Q ss_pred cCCHHHHHHHHhhhhhhccccc
Q 019009 235 CELPETVARTLVPRIRVVKGSG 256 (347)
Q Consensus 235 ~~~pe~~a~~~~~~~~~~~~~~ 256 (347)
.+.-||..+.+...+.+.+-.|
T Consensus 195 WIhieD~v~~I~fll~~~~lsG 216 (297)
T COG1090 195 WIHIEDLVNAILFLLENEQLSG 216 (297)
T ss_pred eeeHHHHHHHHHHHHhCcCCCC
Confidence 2357888888887777655444
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=89.80 Aligned_cols=187 Identities=13% Similarity=0.092 Sum_probs=108.5
Q ss_pred CCeEEEE----cCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHH----HHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 12 TCRWFSV----VSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT----ELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 12 ~k~vlIT----Gas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.++|||| ||||.||..++++|+++|++|+++.|+......... .+.+. ....+.++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l----------------~~~~v~~v 115 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL----------------SSAGVKTV 115 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh----------------hhcCceEE
Confidence 4789999 999999999999999999999999998764322110 00000 01236778
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.+|+.| +.+++. ..++|+|||++|.. .+ + ++.++..+++. +-.++|
T Consensus 116 ~~D~~d---~~~~~~-----~~~~d~Vi~~~~~~----------~~-----------~----~~~ll~aa~~~-gvkr~V 161 (378)
T PLN00016 116 WGDPAD---VKSKVA-----GAGFDVVYDNNGKD----------LD-----------E----VEPVADWAKSP-GLKQFL 161 (378)
T ss_pred EecHHH---HHhhhc-----cCCccEEEeCCCCC----------HH-----------H----HHHHHHHHHHc-CCCEEE
Confidence 888876 333321 13689999987521 11 1 22334444443 345899
Q ss_pred EEcCCCCCCC--CCCC-----cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-------chhh
Q 019009 164 NMDGAGSGGS--STPL-----TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-------QNKQ 229 (347)
Q Consensus 164 ~vsS~~~~~~--~~~~-----~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-------~~~~ 229 (347)
++||.+.-.. ..|. ...+. +|...+.+.+ ..++.+..+.|+.+..+........ ....
T Consensus 162 ~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~ 233 (378)
T PLN00016 162 FCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRP 233 (378)
T ss_pred EEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCc
Confidence 9998632110 0110 01122 7887776543 2478999999998877642111000 0000
Q ss_pred h--hh-----hccCCHHHHHHHHhhhhhhccccc
Q 019009 230 M--FN-----IICELPETVARTLVPRIRVVKGSG 256 (347)
Q Consensus 230 ~--~~-----~~~~~pe~~a~~~~~~~~~~~~~~ 256 (347)
+ .. ......+++++.++..+..+...+
T Consensus 234 i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~ 267 (378)
T PLN00016 234 VPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAG 267 (378)
T ss_pred eeecCCCCeeeceecHHHHHHHHHHHhcCccccC
Confidence 0 00 011247899999888777654434
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.9e-08 Score=89.28 Aligned_cols=82 Identities=13% Similarity=0.154 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCh---hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+|+++|||| ||+|++++..|++.|++ |++++|+. ++++++.+++.+ ....+....+|
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~-----------------~~~~~~~~~~d 186 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ-----------------EVPECIVNVYD 186 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh-----------------cCCCceeEEec
Confidence 4689999999 69999999999999986 99999997 677777666644 22334556788
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
+++.+++.+.++ ..|+||||.-+.
T Consensus 187 ~~~~~~~~~~~~-------~~DilINaTp~G 210 (289)
T PRK12548 187 LNDTEKLKAEIA-------SSDILVNATLVG 210 (289)
T ss_pred hhhhhHHHhhhc-------cCCEEEEeCCCC
Confidence 888777665443 469999988654
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.3e-07 Score=94.53 Aligned_cols=168 Identities=15% Similarity=0.203 Sum_probs=104.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+||||||+|.||..++++|.++|++|++++|++... ....+.++.+|+++.. +
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------------------------~~~~ve~v~~Dl~d~~-l 54 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------------------------LDPRVDYVCASLRNPV-L 54 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------------------------ccCCceEEEccCCCHH-H
Confidence 589999999999999999999999999999865321 1124678899999873 3
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
.+++ .++|++||.|+... . . ...+|+.+..++++++.. . +.+||++||. .+.
T Consensus 55 ~~al-------~~~D~VIHLAa~~~-~------~------~~~vNv~Gt~nLleAA~~----~--GvRiV~~SS~-~G~- 106 (699)
T PRK12320 55 QELA-------GEADAVIHLAPVDT-S------A------PGGVGITGLAHVANAAAR----A--GARLLFVSQA-AGR- 106 (699)
T ss_pred HHHh-------cCCCEEEEcCccCc-c------c------hhhHHHHHHHHHHHHHHH----c--CCeEEEEECC-CCC-
Confidence 3332 26899999998632 0 0 114788888888887643 2 3479998875 221
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhh----hhc---cCCHHHHHHHHh
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF----NII---CELPETVARTLV 246 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~----~~~---~~~pe~~a~~~~ 246 (347)
+ ..|. . .+.+..+ .++.+..+.|+.+..+.........-..+. ... ....+++++.++
T Consensus 107 --~--~~~~----~----aE~ll~~---~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv 171 (699)
T PRK12320 107 --P--ELYR----Q----AETLVST---GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLV 171 (699)
T ss_pred --C--cccc----H----HHHHHHh---cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHH
Confidence 1 1232 1 2222222 346778888888876632111000000000 000 125678888887
Q ss_pred hhhhh
Q 019009 247 PRIRV 251 (347)
Q Consensus 247 ~~~~~ 251 (347)
..+..
T Consensus 172 ~al~~ 176 (699)
T PRK12320 172 LALNT 176 (699)
T ss_pred HHHhC
Confidence 76654
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.9e-08 Score=85.43 Aligned_cols=100 Identities=19% Similarity=0.220 Sum_probs=68.8
Q ss_pred CeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~G-IG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.+-.||+.|+| ||+++|+.|+++|++|++++|+.... .. ....+.++.+ .
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~----------------~~~~v~~i~v--~--- 66 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE----------------PHPNLSIIEI--E--- 66 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC----------------CCCCeEEEEE--e---
Confidence 46678876665 99999999999999999998764210 00 0123444443 2
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHH
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~ 142 (347)
+..++.+.+.+.++.+|++|||||+.. +.+....+.+++..++++|.+..
T Consensus 67 s~~~m~~~l~~~~~~~DivIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 67 NVDDLLETLEPLVKDHDVLIHSMAVSD-YTPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred cHHHHHHHHHHHhcCCCEEEeCCccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence 223333334444567999999999976 56777788899999999987654
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.1e-06 Score=76.61 Aligned_cols=183 Identities=13% Similarity=0.113 Sum_probs=108.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
|+||||||.+|+.+++.|++.|++|.+..|+..+ +..++++. . .+..+.+|+.|.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~-----------------~--g~~vv~~d~~~~~~l~ 59 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQA-----------------L--GAEVVEADYDDPESLV 59 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHH-----------------T--TTEEEES-TT-HHHHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhc-----------------c--cceEeecccCCHHHHH
Confidence 6899999999999999999999999999999843 23334443 2 2456799999999988
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS 174 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~ 174 (347)
++++ ++|.+|++-+... +.. ......+++++... +-.++| .||.+.....
T Consensus 60 ~al~-------g~d~v~~~~~~~~------~~~-----------~~~~~~li~Aa~~a-----gVk~~v-~ss~~~~~~~ 109 (233)
T PF05368_consen 60 AALK-------GVDAVFSVTPPSH------PSE-----------LEQQKNLIDAAKAA-----GVKHFV-PSSFGADYDE 109 (233)
T ss_dssp HHHT-------TCSEEEEESSCSC------CCH-----------HHHHHHHHHHHHHH-----T-SEEE-ESEESSGTTT
T ss_pred HHHc-------CCceEEeecCcch------hhh-----------hhhhhhHHHhhhcc-----ccceEE-EEEecccccc
Confidence 8875 7999998887532 111 11223344444433 234576 4555333321
Q ss_pred C-CC--cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcc---cchh----hh-----hhhcc-CCH
Q 019009 175 T-PL--TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST---IQNK----QM-----FNIIC-ELP 238 (347)
Q Consensus 175 ~-~~--~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~---~~~~----~~-----~~~~~-~~p 238 (347)
. .. ...+-..|..++.+.+.+ ++..+.|.||+....+...... .... .+ .+... .+.
T Consensus 110 ~~~~~p~~~~~~~k~~ie~~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (233)
T PF05368_consen 110 SSGSEPEIPHFDQKAEIEEYLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDT 182 (233)
T ss_dssp TTTSTTHHHHHHHHHHHHHHHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHH
T ss_pred cccccccchhhhhhhhhhhhhhhc-------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccH
Confidence 1 11 122334677666555433 7899999999876554321111 0000 00 00111 256
Q ss_pred HHHHHHHhhhhhhcccc
Q 019009 239 ETVARTLVPRIRVVKGS 255 (347)
Q Consensus 239 e~~a~~~~~~~~~~~~~ 255 (347)
+++++.+...+..|+..
T Consensus 183 ~Dvg~~va~il~~p~~~ 199 (233)
T PF05368_consen 183 RDVGRAVAAILLDPEKH 199 (233)
T ss_dssp HHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHcChHHh
Confidence 88888888777776654
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.5e-07 Score=77.48 Aligned_cols=81 Identities=16% Similarity=0.107 Sum_probs=64.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++++|+||++++|+++++.|+++|++|++++|+.+++++..+++.+. . ......+|..+.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~----------------~--~~~~~~~~~~~~ 88 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR----------------F--GEGVGAVETSDD 88 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh----------------c--CCcEEEeeCCCH
Confidence 3589999999999999999999999999999999999888877776532 1 223446788888
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+++.+.++ +.|++|++...
T Consensus 89 ~~~~~~~~-------~~diVi~at~~ 107 (194)
T cd01078 89 AARAAAIK-------GADVVFAAGAA 107 (194)
T ss_pred HHHHHHHh-------cCCEEEECCCC
Confidence 88776664 57988886654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.8e-07 Score=88.26 Aligned_cols=107 Identities=21% Similarity=0.218 Sum_probs=71.5
Q ss_pred CCCeEEEEcC---------------CCh-HHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 019009 11 CTCRWFSVVS---------------TRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74 (347)
Q Consensus 11 ~~k~vlITGa---------------s~G-IG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 74 (347)
.||++||||| |+| +|.++|+.|+.+|++|++++++....
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------------------------- 238 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------------------------- 238 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-------------------------
Confidence 4799999999 677 99999999999999999988764320
Q ss_pred ccCceeeEEecCCCCHHHH-HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHH---HHHHhhhhHHHHHHHHHH
Q 019009 75 LVHAKVAGIACDVCEPADV-QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE---QIVSTNLVGSILCTREAM 150 (347)
Q Consensus 75 ~~~~~~~~~~~Dls~~~~v-~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~---~~~~vN~~g~~~l~~~~l 150 (347)
.... ...+|+++.+++ ++++++ .++++|++|+|||+.. +.+.... .+.+. ..+.+|+.-.--+++.+.
T Consensus 239 -~~~~--~~~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd-~~~~~~~-~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 239 -TPPG--VKSIKVSTAEEMLEAALNE---LAKDFDIFISAAAVAD-FKPKTVF-EGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred -CCCC--cEEEEeccHHHHHHHHHHh---hcccCCEEEEcccccc-ccccccc-cccccccCCceeEEEEeCcHHHHHHH
Confidence 0111 245799999888 555544 3467999999999976 4444321 11122 234455555544444443
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=8e-07 Score=91.89 Aligned_cols=166 Identities=16% Similarity=0.184 Sum_probs=131.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHH---HHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVR---MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
-.-|.++|+||=+|.|+++|.-|.++|+ ++++++|+--+-- ..+...+. .+.++..-..
T Consensus 1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~-----------------~GVqV~vsT~ 1828 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR-----------------RGVQVQVSTS 1828 (2376)
T ss_pred CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh-----------------cCeEEEEecc
Confidence 3458999999999999999999999998 5889999754321 12233333 5677777778
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|++..+..++++++. .+.+.+..++|-|.+.. .+.+++.+++.|+..-+..+.|++++-+.-..+--+ -..+|.+
T Consensus 1829 nitt~~ga~~Li~~s-~kl~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---LdyFv~F 1903 (2376)
T KOG1202|consen 1829 NITTAEGARGLIEES-NKLGPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE---LDYFVVF 1903 (2376)
T ss_pred cchhhhhHHHHHHHh-hhcccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc---cceEEEE
Confidence 999999999998875 45588999999998877 588999999999999999999999887765544322 2357777
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~e 198 (347)
||. ...++..++..|+-+..+++.+++.=+.+
T Consensus 1904 SSv-scGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1904 SSV-SCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred Eee-cccCCCCcccccchhhHHHHHHHHHhhhc
Confidence 777 67788999999999999999999754443
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.8e-06 Score=82.10 Aligned_cols=136 Identities=21% Similarity=0.231 Sum_probs=90.3
Q ss_pred CCcccCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChh--HHH---------HHHHHHHHHhhhhhhhcCCCC
Q 019009 6 DEHWSCTCRWFSVVSTRGLGKALAREFLLSG---DRVVVASRSSE--SVR---------MTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 6 ~~~~~~~k~vlITGas~GIG~aiA~~la~~G---~~Vil~~R~~~--~l~---------~~~~~l~~~~~~~~~~~~~~~ 71 (347)
-..+-.+|+++||||||.+|+-+...|++.- -++++.=|... ..+ .+.+.+++..++
T Consensus 6 i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~--------- 76 (467)
T KOG1221|consen 6 IVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPE--------- 76 (467)
T ss_pred HHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcc---------
Confidence 3456678999999999999999999999753 26777766422 111 112222222221
Q ss_pred cccccCceeeEEecCCCCHHH-HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHH
Q 019009 72 KKNLVHAKVAGIACDVCEPAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAM 150 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~-v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~l 150 (347)
.-.++..+..|+++++- +..--.+.. ...+|++||+|+... | .|.++..+.+|.+|+..+.+.+.
T Consensus 77 ----~l~Kv~pi~GDi~~~~LGis~~D~~~l--~~eV~ivih~AAtvr----F----de~l~~al~iNt~Gt~~~l~lak 142 (467)
T KOG1221|consen 77 ----ALEKVVPIAGDISEPDLGISESDLRTL--ADEVNIVIHSAATVR----F----DEPLDVALGINTRGTRNVLQLAK 142 (467)
T ss_pred ----ceecceeccccccCcccCCChHHHHHH--HhcCCEEEEeeeeec----c----chhhhhhhhhhhHhHHHHHHHHH
Confidence 33578899999987652 221111111 126999999998643 2 25678899999999999999887
Q ss_pred HHhHcCCCCcEEEEEcCC
Q 019009 151 RVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 151 p~l~~~~~~g~Iv~vsS~ 168 (347)
....- ...+.+|.+
T Consensus 143 ~~~~l----~~~vhVSTA 156 (467)
T KOG1221|consen 143 EMVKL----KALVHVSTA 156 (467)
T ss_pred Hhhhh----heEEEeehh
Confidence 76543 357777764
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.2e-05 Score=64.46 Aligned_cols=191 Identities=15% Similarity=0.111 Sum_probs=119.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
.+.|.|||+-.|..|+++..++|+.|+.+.||+.++... ..+..++.|+.|++++
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------------------~~~~i~q~Difd~~~~ 56 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------------------QGVTILQKDIFDLTSL 56 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------------------ccceeecccccChhhh
Confidence 567899999999999999999999999999999876421 2455788999999988
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC-
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG- 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~- 172 (347)
.+.+. +.|+||..-|...+ . .+ +.. ....+.++..++.. ...|++.|++.++-.
T Consensus 57 a~~l~-------g~DaVIsA~~~~~~-~------~~--~~~--------~k~~~~li~~l~~a-gv~RllVVGGAGSL~i 111 (211)
T COG2910 57 ASDLA-------GHDAVISAFGAGAS-D------ND--ELH--------SKSIEALIEALKGA-GVPRLLVVGGAGSLEI 111 (211)
T ss_pred Hhhhc-------CCceEEEeccCCCC-C------hh--HHH--------HHHHHHHHHHHhhc-CCeeEEEEcCccceEE
Confidence 66554 78999998776421 1 11 111 11145555666554 467899998764311
Q ss_pred ------CCCCCc-chhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch-hh----hhhhccCCHHH
Q 019009 173 ------SSTPLT-AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQ----MFNIICELPET 240 (347)
Q Consensus 173 ------~~~~~~-~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~-~~----~~~~~~~~pe~ 240 (347)
...|.. ..|-..-.+.--+.+.|+.| ..+..+-|+|..+..|.-........ .. ....-.++-++
T Consensus 112 d~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aD 188 (211)
T COG2910 112 DEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYAD 188 (211)
T ss_pred cCCceeecCCCCchhHHHHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHH
Confidence 111222 23433333333444566666 34788889998876663222111000 00 01112346789
Q ss_pred HHHHHhhhhhhcccccc
Q 019009 241 VARTLVPRIRVVKGSGK 257 (347)
Q Consensus 241 ~a~~~~~~~~~~~~~~~ 257 (347)
.|-.++..+..|+...+
T Consensus 189 YAiA~lDe~E~~~h~rq 205 (211)
T COG2910 189 YAIAVLDELEKPQHIRQ 205 (211)
T ss_pred HHHHHHHHHhcccccce
Confidence 99999988887765443
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.4e-06 Score=78.45 Aligned_cols=172 Identities=17% Similarity=0.110 Sum_probs=103.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
...+|+|+||||++|+-+++.|.++|+.|..+.|+.++.++... +.. .......+..|....
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~-----------------~d~~~~~v~~~~~~~ 139 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFF-----------------VDLGLQNVEADVVTA 139 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccc-----------------cccccceeeeccccc
Confidence 34799999999999999999999999999999999887766554 100 112333445555554
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
.++...+-+... -...+++-++|.-.. .+ +...-..|.+.|..+++.++... +-.++|.++|++.
T Consensus 140 ~d~~~~~~~~~~--~~~~~v~~~~ggrp~----~e----d~~~p~~VD~~g~knlvdA~~~a-----Gvk~~vlv~si~~ 204 (411)
T KOG1203|consen 140 IDILKKLVEAVP--KGVVIVIKGAGGRPE----EE----DIVTPEKVDYEGTKNLVDACKKA-----GVKRVVLVGSIGG 204 (411)
T ss_pred cchhhhhhhhcc--ccceeEEecccCCCC----cc----cCCCcceecHHHHHHHHHHHHHh-----CCceEEEEEeecC
Confidence 443332222111 135677777775331 11 12222345566788888887433 3457999988855
Q ss_pred CCCCCCCcchhhhHHHHHHHHH-HHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQ-ASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~-~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.....+.+..+. .....-. +...+++...|+.-..|.||....+.
T Consensus 205 ~~~~~~~~~~~~---~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~ 250 (411)
T KOG1203|consen 205 TKFNQPPNILLL---NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT 250 (411)
T ss_pred cccCCCchhhhh---hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence 444444444332 1111111 22333445678888999999876543
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.6e-05 Score=71.34 Aligned_cols=209 Identities=14% Similarity=0.103 Sum_probs=132.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
|-++-|.|||+.+|+-++.+|++.|-+|++-.|-.+.--...+-+- .-+++.++..|+.|++
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG------------------dLGQvl~~~fd~~Ded 122 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG------------------DLGQVLFMKFDLRDED 122 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc------------------cccceeeeccCCCCHH
Confidence 5688899999999999999999999999999886542111111110 2268999999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+|+++++. -+++||--|.-.+.. ..+-+ ++|+.++-.+.+.+-..- --+.|.+|+.++.
T Consensus 123 SIr~vvk~-------sNVVINLIGrd~eTk---nf~f~------Dvn~~~aerlAricke~G-----VerfIhvS~Lgan 181 (391)
T KOG2865|consen 123 SIRAVVKH-------SNVVINLIGRDYETK---NFSFE------DVNVHIAERLARICKEAG-----VERFIHVSCLGAN 181 (391)
T ss_pred HHHHHHHh-------CcEEEEeeccccccC---Ccccc------cccchHHHHHHHHHHhhC-----hhheeehhhcccc
Confidence 99999873 489999998744322 22222 467777766666553332 2368999877432
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh--hhhc------------cCC
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM--FNII------------CEL 237 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~--~~~~------------~~~ 237 (347)
...-+-|--||++-+--++ .++.+ .+.|.|.-|.... ..........+ +... +..
T Consensus 182 ---v~s~Sr~LrsK~~gE~aVr---dafPe----AtIirPa~iyG~e-Drfln~ya~~~rk~~~~pL~~~GekT~K~PVy 250 (391)
T KOG2865|consen 182 ---VKSPSRMLRSKAAGEEAVR---DAFPE----ATIIRPADIYGTE-DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVY 250 (391)
T ss_pred ---ccChHHHHHhhhhhHHHHH---hhCCc----ceeechhhhcccc-hhHHHHHHHHHHhcCceeeecCCcceeeccEE
Confidence 2233456777777665443 33432 3456676654321 01111000000 0000 012
Q ss_pred HHHHHHHHhhhhhhccccccceeeccchHHHHH
Q 019009 238 PETVARTLVPRIRVVKGSGKAINYLTPPRILLA 270 (347)
Q Consensus 238 pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 270 (347)
.-+||..|+.++..|+..|....|..++...+.
T Consensus 251 V~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~ 283 (391)
T KOG2865|consen 251 VVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLS 283 (391)
T ss_pred EehHHHHHHHhccCccccCceeeecCCchhhHH
Confidence 458999999999999888988888877755443
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.2e-06 Score=80.25 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=66.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
++++||.|| |+||+.+|..|+++| .+|++++|+.++++++.+.. ..++.++++|+.|.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--------------------~~~v~~~~vD~~d~ 59 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--------------------GGKVEALQVDAADV 59 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--------------------cccceeEEecccCh
Confidence 478999999 999999999999999 79999999999887665442 34788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
+.+.++++ ..|++||++...
T Consensus 60 ~al~~li~-------~~d~VIn~~p~~ 79 (389)
T COG1748 60 DALVALIK-------DFDLVINAAPPF 79 (389)
T ss_pred HHHHHHHh-------cCCEEEEeCCch
Confidence 99888876 349999998653
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.30 E-value=8.3e-06 Score=73.11 Aligned_cols=165 Identities=18% Similarity=0.169 Sum_probs=106.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+.+++++||||+|.||..++..|..+|+.|++.+---..-.+...... ....+..+.-|+..
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~------------------~~~~fel~~hdv~~ 86 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI------------------GHPNFELIRHDVVE 86 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc------------------cCcceeEEEeechh
Confidence 456899999999999999999999999999998764433222211111 11345555666654
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+ ++. .+|.++|-|....|.. . ... -.+++.+|+.+.+++...+-.. +.|++..|++.
T Consensus 87 p-----l~~-------evD~IyhLAapasp~~-y-~~n---pvktIktN~igtln~lglakrv------~aR~l~aSTse 143 (350)
T KOG1429|consen 87 P-----LLK-------EVDQIYHLAAPASPPH-Y-KYN---PVKTIKTNVIGTLNMLGLAKRV------GARFLLASTSE 143 (350)
T ss_pred H-----HHH-------HhhhhhhhccCCCCcc-c-ccC---ccceeeecchhhHHHHHHHHHh------CceEEEeeccc
Confidence 4 333 4688888887644211 1 111 1456788999999988877554 35677777642
Q ss_pred C-CC--------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 S-GG--------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~-~~--------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. +. .+......|.-.|.+.+.|+....++ .||.|....+-.+..|.
T Consensus 144 VYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPr 204 (350)
T KOG1429|consen 144 VYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPR 204 (350)
T ss_pred ccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCc
Confidence 1 11 11122367999999999999888776 57777666665554443
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.4e-06 Score=74.81 Aligned_cols=174 Identities=12% Similarity=-0.002 Sum_probs=116.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSG--DRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
|.. |+++||||.+.||...+..++..= ++.+..+. +--...+.++++. ...+..++..
T Consensus 4 ~~~-~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~------------------n~p~ykfv~~ 64 (331)
T KOG0747|consen 4 YKE-KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR------------------NSPNYKFVEG 64 (331)
T ss_pred Ccc-ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc------------------cCCCceEeec
Confidence 444 899999999999999999988753 44443321 0000012222222 2357889999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|+.+...+..++.. ..+|.|+|-|...... .+--+--..+..|+++...|.+...-.. +-.++|.|
T Consensus 65 di~~~~~~~~~~~~-----~~id~vihfaa~t~vd-----~s~~~~~~~~~nnil~t~~Lle~~~~sg----~i~~fvhv 130 (331)
T KOG0747|consen 65 DIADADLVLYLFET-----EEIDTVIHFAAQTHVD-----RSFGDSFEFTKNNILSTHVLLEAVRVSG----NIRRFVHV 130 (331)
T ss_pred cccchHHHHhhhcc-----CchhhhhhhHhhhhhh-----hhcCchHHHhcCCchhhhhHHHHHHhcc----CeeEEEEe
Confidence 99998888776643 4899999999864421 1111223456789999999888876654 23478999
Q ss_pred cCCC-CCC----------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 166 DGAG-SGG----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 166 sS~~-~~~----------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
|+-. -|. ........|+++|+|.+++.+++.+.| |+.|..+.-+.|-.|-
T Consensus 131 STdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~ 191 (331)
T KOG0747|consen 131 STDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPN 191 (331)
T ss_pred cccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCC
Confidence 8631 111 111233579999999999999999885 6788888877777664
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.7e-05 Score=68.61 Aligned_cols=133 Identities=16% Similarity=0.127 Sum_probs=90.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
.+||||||+.+|.+++++|.++|++|.+..|++++..... ..+.+...|+.+++++
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------------------~~v~~~~~d~~~~~~l 57 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------------------GGVEVVLGDLRDPKSL 57 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------------------CCcEEEEeccCCHhHH
Confidence 6899999999999999999999999999999998765432 3577889999999998
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
...++ ++|.+++..+... ... ..............+..- . ...+++.+|..+ ...
T Consensus 58 ~~a~~-------G~~~~~~i~~~~~-~~~----------~~~~~~~~~~~~~a~~a~----~--~~~~~~~~s~~~-~~~ 112 (275)
T COG0702 58 VAGAK-------GVDGVLLISGLLD-GSD----------AFRAVQVTAVVRAAEAAG----A--GVKHGVSLSVLG-ADA 112 (275)
T ss_pred HHHhc-------cccEEEEEecccc-ccc----------chhHHHHHHHHHHHHHhc----C--CceEEEEeccCC-CCC
Confidence 88775 7888888776532 111 011112223333333332 1 234577776552 222
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHh
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFK 197 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~ 197 (347)
.....|..+|...+...++...
T Consensus 113 --~~~~~~~~~~~~~e~~l~~sg~ 134 (275)
T COG0702 113 --ASPSALARAKAAVEAALRSSGI 134 (275)
T ss_pred --CCccHHHHHHHHHHHHHHhcCC
Confidence 2346799999998887764443
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.1e-06 Score=78.68 Aligned_cols=75 Identities=28% Similarity=0.414 Sum_probs=59.2
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+|.|+ |.+|+.+++.|++++. +|++.+|+.+++++..+++ .+.++..+.+|+.|.++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------------------~~~~~~~~~~d~~~~~~ 60 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------------------LGDRVEAVQVDVNDPES 60 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------------------TTTTEEEEE--TTTHHH
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------------------cccceeEEEEecCCHHH
Confidence 689999 9999999999999984 8999999999988877665 23578899999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
++++++ +.|++||++|.
T Consensus 61 l~~~~~-------~~dvVin~~gp 77 (386)
T PF03435_consen 61 LAELLR-------GCDVVINCAGP 77 (386)
T ss_dssp HHHHHT-------TSSEEEE-SSG
T ss_pred HHHHHh-------cCCEEEECCcc
Confidence 888875 56999999975
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.05 E-value=4e-05 Score=62.64 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=41.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|.|+ ||.|+++++.|++.|++ |+++.|+.++++++.+++
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 4699999998 89999999999999986 999999999988887776
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.2e-05 Score=72.39 Aligned_cols=149 Identities=8% Similarity=0.071 Sum_probs=92.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
++|.|||++|.+|..+|..|+.+|. +++++++++ .+..+.+|... .... ...|+++.
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~-----------------~~~~--~i~~~~~~ 77 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHI-----------------NTPA--QVRGFLGD 77 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhC-----------------CcCc--eEEEEeCC
Confidence 6899999999999999999997773 799999987 22222344331 1111 12243333
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.+.+ .+.|++|+.||... .+ .. .++..+..|+... +.+.+.+.+....+.|+++|-..-
T Consensus 78 ~d~~~~l-------~~aDiVVitAG~~~--~~--g~---~R~dll~~N~~i~----~~i~~~i~~~~p~aivivvSNPvD 139 (323)
T PLN00106 78 DQLGDAL-------KGADLVIIPAGVPR--KP--GM---TRDDLFNINAGIV----KTLCEAVAKHCPNALVNIISNPVN 139 (323)
T ss_pred CCHHHHc-------CCCCEEEEeCCCCC--CC--CC---CHHHHHHHHHHHH----HHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3333332 37899999999854 21 22 3566777787664 455555555433455555543321
Q ss_pred -----------CCCCCCCcchhhhHHHHHHHHHHHHHhHhc
Q 019009 171 -----------GGSSTPLTAVYGSTKCGLRQLQASLFKESK 200 (347)
Q Consensus 171 -----------~~~~~~~~~~Y~asKaal~~~~~~La~el~ 200 (347)
...++|..-.|+.++.-...|-..++.++.
T Consensus 140 ~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 140 STVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred ccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence 113455566788888666778888888875
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.8e-05 Score=75.56 Aligned_cols=75 Identities=17% Similarity=0.232 Sum_probs=56.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++.+ . .+.++..|..+
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-----------------~--~~~~~~~~~~~- 63 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-----------------L--GIELVLGEYPE- 63 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----------------c--CCEEEeCCcch-
Confidence 68999999887 99999999999999999999985 444444455533 1 24466777775
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
+..+++|+||+++|+..
T Consensus 64 -----------~~~~~~d~vv~~~g~~~ 80 (450)
T PRK14106 64 -----------EFLEGVDLVVVSPGVPL 80 (450)
T ss_pred -----------hHhhcCCEEEECCCCCC
Confidence 12257899999999743
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.94 E-value=3e-05 Score=71.55 Aligned_cols=84 Identities=15% Similarity=0.207 Sum_probs=69.6
Q ss_pred eEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 14 RWFSVVSTRGLGKALAREFLL----SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~----~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
-++|-|||+--|.-+++++.. .|..+.+.+||++++++.++++.+..+. + ....+ .+.||.+|
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~--------~----ls~~~-i~i~D~~n 73 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGT--------D----LSSSV-ILIADSAN 73 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCC--------C----cccce-EEEecCCC
Confidence 489999999999999999999 7889999999999999999988764321 0 12233 78899999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
++++.+++.+ ..++|||+|-.
T Consensus 74 ~~Sl~emak~-------~~vivN~vGPy 94 (423)
T KOG2733|consen 74 EASLDEMAKQ-------ARVIVNCVGPY 94 (423)
T ss_pred HHHHHHHHhh-------hEEEEeccccc
Confidence 9999999875 46999999853
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00024 Score=65.69 Aligned_cols=141 Identities=13% Similarity=0.133 Sum_probs=85.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|++++|+|+++++|.++++.+...|.+|++++++.++.+.+ .++ +.+ ..+|..
T Consensus 142 ~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~--------------------g~~---~~~~~~ 197 (325)
T cd08253 142 AKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA--------------------GAD---AVFNYR 197 (325)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCC---EEEeCC
Confidence 45679999999999999999999999999999999988765443 111 111 123445
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.+..+.+.+.. .. .++|++++++|... .+.. ...+. ..|+++++++.
T Consensus 198 ~~~~~~~~~~~~-~~-~~~d~vi~~~~~~~------------~~~~---------------~~~l~---~~g~~v~~~~~ 245 (325)
T cd08253 198 AEDLADRILAAT-AG-QGVDVIIEVLANVN------------LAKD---------------LDVLA---PGGRIVVYGSG 245 (325)
T ss_pred CcCHHHHHHHHc-CC-CceEEEEECCchHH------------HHHH---------------HHhhC---CCCEEEEEeec
Confidence 444444443322 11 36999999986311 1111 12222 35789888752
Q ss_pred C-----------CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeE
Q 019009 169 G-----------SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG 205 (347)
Q Consensus 169 ~-----------~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~ 205 (347)
. ......+....|..+|..+..+.+.+...+....++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 293 (325)
T cd08253 246 GLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALR 293 (325)
T ss_pred CCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence 1 001111222356777777777777777666554444
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.2e-05 Score=68.92 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=31.5
Q ss_pred CCCeEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEeCC
Q 019009 11 CTCRWFSVVST----------------RGLGKALAREFLLSGDRVVVASRS 45 (347)
Q Consensus 11 ~~k~vlITGas----------------~GIG~aiA~~la~~G~~Vil~~R~ 45 (347)
.||+||||+|. |-||.++|+.|+++|++|+++++.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 47999999885 899999999999999999988763
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00014 Score=68.15 Aligned_cols=149 Identities=11% Similarity=0.080 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
++++|.|||++|.||..+|..|+.+| .++++++++ +.+....++... ... ....+.+
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~-----------------~~~--~~v~~~t 65 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHI-----------------DTP--AKVTGYA 65 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhc-----------------CcC--ceEEEec
Confidence 45789999999999999999999666 589999993 222223344331 111 2233555
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|+.+..+.+ .+.|++|++||... .+ . +.....+..|+... +.+.+.|++. ...+||+++|.
T Consensus 66 d~~~~~~~l-------~gaDvVVitaG~~~--~~--~---~tR~dll~~N~~i~----~~i~~~i~~~-~~~~iviv~SN 126 (321)
T PTZ00325 66 DGELWEKAL-------RGADLVLICAGVPR--KP--G---MTRDDLFNTNAPIV----RDLVAAVASS-APKAIVGIVSN 126 (321)
T ss_pred CCCchHHHh-------CCCCEEEECCCCCC--CC--C---CCHHHHHHHHHHHH----HHHHHHHHHH-CCCeEEEEecC
Confidence 544432222 36899999999753 21 1 23466778787655 4455555554 34457776654
Q ss_pred CC------------CCCCCCCcchhhhHHHHHHHHHHHHHhHh
Q 019009 169 GS------------GGSSTPLTAVYGSTKCGLRQLQASLFKES 199 (347)
Q Consensus 169 ~~------------~~~~~~~~~~Y~asKaal~~~~~~La~el 199 (347)
.. ...++|....|+.+-.=-..|-..+++.+
T Consensus 127 Pvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~la~~l 169 (321)
T PTZ00325 127 PVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFVAEAL 169 (321)
T ss_pred cHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHHHHHh
Confidence 21 12234555567776211233445566665
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00034 Score=60.95 Aligned_cols=148 Identities=14% Similarity=0.044 Sum_probs=91.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~---~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
++++|||+++=+|+||.+.+.++|. +.++.+. -.+|+++
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s--------------------------------------kd~DLt~ 43 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS--------------------------------------KDADLTN 43 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc--------------------------------------ccccccc
Confidence 7899999999999999999999885 3444332 1579999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCC--CCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ--FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~--~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
.++++++++.. ++..+||-|.... +.+.. ...|=|.. |+.-.-++++.+..+-.+ +++...|
T Consensus 44 ~a~t~~lF~~e-----kPthVIhlAAmVG--Glf~N~~ynldF~r~----Nl~indNVlhsa~e~gv~-----K~vsclS 107 (315)
T KOG1431|consen 44 LADTRALFESE-----KPTHVIHLAAMVG--GLFHNNTYNLDFIRK----NLQINDNVLHSAHEHGVK-----KVVSCLS 107 (315)
T ss_pred hHHHHHHHhcc-----CCceeeehHhhhc--chhhcCCCchHHHhh----cceechhHHHHHHHhchh-----hhhhhcc
Confidence 99999998864 6788888886643 22332 23333333 333333444444443221 1333222
Q ss_pred CCC---------------CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 168 AGS---------------GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 168 ~~~---------------~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
.+- ...+.|..-.|+.+|.-+.-..++.+.++ |-...++.|-.+..|
T Consensus 108 tCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGp 169 (315)
T KOG1431|consen 108 TCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGP 169 (315)
T ss_pred eeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCC
Confidence 210 11122334569999987777778888885 455666666555443
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00014 Score=68.41 Aligned_cols=46 Identities=22% Similarity=0.273 Sum_probs=38.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-C-CeEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS-G-DRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~-G-~~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++||||+|.||..++++|+++ | .+|++++|+++++++..+++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el 201 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL 201 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence 4699999999999999999999864 6 58999999988877655443
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00025 Score=64.94 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=41.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~ 58 (347)
.+|+++|+|+ +|+|++++..|++.|++|++++|+.++.++..+++..
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~ 162 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR 162 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence 3689999999 5999999999999999999999999988877776643
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00029 Score=66.26 Aligned_cols=117 Identities=12% Similarity=0.136 Sum_probs=68.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG-------DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G-------~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
-+++||||+|.+|..++..|+..| .+|++.++++. +++...-++... ....
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~--------------------~~~~ 62 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC--------------------AFPL 62 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc--------------------cccc
Confidence 368999999999999999999855 58999999653 222211122110 0011
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHI 162 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~I 162 (347)
..|+....+.. +.+.+.|++|+.||... .+ ..+. ...++.|+ .+.+...+.+.+.. ..+.+
T Consensus 63 ~~~~~~~~~~~-------~~l~~aDiVI~tAG~~~--~~--~~~R---~~l~~~N~----~i~~~i~~~i~~~~~~~~ii 124 (325)
T cd01336 63 LKSVVATTDPE-------EAFKDVDVAILVGAMPR--KE--GMER---KDLLKANV----KIFKEQGEALDKYAKKNVKV 124 (325)
T ss_pred cCCceecCCHH-------HHhCCCCEEEEeCCcCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEE
Confidence 11332222222 22347999999999854 21 2222 44555664 45566666666652 36677
Q ss_pred EEEcC
Q 019009 163 FNMDG 167 (347)
Q Consensus 163 v~vsS 167 (347)
+++|.
T Consensus 125 ivvsN 129 (325)
T cd01336 125 LVVGN 129 (325)
T ss_pred EEecC
Confidence 77763
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00041 Score=57.64 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=38.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELE 57 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~ 57 (347)
+++++|+|+ +++|.++++.|++.| .+|++++|++++.++..+++.
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~ 64 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG 64 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence 588999998 799999999999996 789999999988777666553
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0017 Score=60.62 Aligned_cols=80 Identities=18% Similarity=0.207 Sum_probs=57.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+++++|+|+++++|.++++.+...|++|+++++++++.+.+ .++ +.. ...|..+
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~--------------------~~~---~~~~~~~ 220 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL--------------------GAD---YVIDYRK 220 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCC---eEEecCC
Confidence 4568999999999999999999999999999999988765433 111 111 1235566
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
.+..+.+.+.... .++|++++++|
T Consensus 221 ~~~~~~~~~~~~~--~~~d~~i~~~g 244 (342)
T cd08266 221 EDFVREVRELTGK--RGVDVVVEHVG 244 (342)
T ss_pred hHHHHHHHHHhCC--CCCcEEEECCc
Confidence 5555555443322 36999999997
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0029 Score=59.06 Aligned_cols=115 Identities=18% Similarity=0.215 Sum_probs=75.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+++.|.|+ |++|.++|..|+..| .+|++++|++++.+....++.+.... .+....... .+.
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~-------------~~~~~~i~~---~~~ 63 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAF-------------LPSPVKIKA---GDY 63 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhc-------------cCCCeEEEc---CCH
Confidence 36788996 899999999999999 58999999999988888888664311 111111111 222
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+++ ...|++|+++|... .+ ..+. ...++.| ..+++...+.+++....+.|+++|
T Consensus 64 ~~l-----------~~aDIVIitag~~~--~~--g~~R---~dll~~N----~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 64 SDC-----------KDADIVVITAGAPQ--KP--GETR---LDLLEKN----AKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred HHh-----------CCCCEEEEccCCCC--CC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEec
Confidence 211 36899999999854 22 2222 2344444 345666667776665567777775
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0075 Score=49.54 Aligned_cols=115 Identities=14% Similarity=0.190 Sum_probs=76.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.|.|+|++|.+|..+|..|...| .++++.++++++++..+.+++..... ......... .+.+
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~-------------~~~~~~i~~---~~~~ 65 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAP-------------LPSPVRITS---GDYE 65 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHG-------------STEEEEEEE---SSGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhh-------------ccccccccc---cccc
Confidence 57899999999999999999988 47999999999988888888775432 112233332 2222
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ +...|++|..||... .+ ..+ -.+.++.|. .+.+...+.+.+....+.++.+|
T Consensus 66 ~-----------~~~aDivvitag~~~--~~--g~s---R~~ll~~N~----~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 66 A-----------LKDADIVVITAGVPR--KP--GMS---RLDLLEANA----KIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp G-----------GTTESEEEETTSTSS--ST--TSS---HHHHHHHHH----HHHHHHHHHHHHHSTTSEEEE-S
T ss_pred c-----------cccccEEEEeccccc--cc--ccc---HHHHHHHhH----hHHHHHHHHHHHhCCccEEEEeC
Confidence 2 236799999999753 21 223 234455554 45566666665554567777764
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0014 Score=55.03 Aligned_cols=155 Identities=15% Similarity=0.095 Sum_probs=97.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
++.++|.|||+-.|..+.+++++.+ -+|+++.|.+..-.+ ....+.....|.+.
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a------------------------t~k~v~q~~vDf~K 73 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA------------------------TDKVVAQVEVDFSK 73 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc------------------------ccceeeeEEechHH
Confidence 4788999999999999999999999 389999997421110 23456666778776
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++...-. .++|+++++-|........ +..+.+..--.+.+.+++ +.++-..++.+||.+
T Consensus 74 l~~~a~~~-------qg~dV~FcaLgTTRgkaGa--------dgfykvDhDyvl~~A~~A-----Ke~Gck~fvLvSS~G 133 (238)
T KOG4039|consen 74 LSQLATNE-------QGPDVLFCALGTTRGKAGA--------DGFYKVDHDYVLQLAQAA-----KEKGCKTFVLVSSAG 133 (238)
T ss_pred HHHHHhhh-------cCCceEEEeeccccccccc--------CceEeechHHHHHHHHHH-----HhCCCeEEEEEeccC
Confidence 66544432 3799999999876521111 111222222222223322 222456899999875
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
+... ....|-..|.-++.=...|-.+ ++..+.||++..+-.
T Consensus 134 Ad~s---SrFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 134 ADPS---SRFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGERT 174 (238)
T ss_pred CCcc---cceeeeeccchhhhhhhhcccc------EEEEecCcceecccc
Confidence 4322 2245777888777766544433 677899999876543
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00016 Score=63.70 Aligned_cols=181 Identities=14% Similarity=0.013 Sum_probs=114.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+...|++||||=|+-=|..+|.-|+..|++|..+-|.....+.. .|+..+.+ + +...+......-.|++
T Consensus 25 ~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~--RIeHlY~n--------P-~~h~~~~mkLHYgDmT 93 (376)
T KOG1372|consen 25 FRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTA--RIEHLYSN--------P-HTHNGASMKLHYGDMT 93 (376)
T ss_pred cccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchh--hhhhhhcC--------c-hhcccceeEEeecccc
Confidence 34557999999999999999999999999999887766554322 22222211 0 1113466778889999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|...+.++++.+ +++-+.|-|..... . .+-|--+.+-+|...|++.+..+....-... +-+..--|++
T Consensus 94 Dss~L~k~I~~i-----kPtEiYnLaAQSHV-k----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstS 161 (376)
T KOG1372|consen 94 DSSCLIKLISTI-----KPTEVYNLAAQSHV-K----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTS 161 (376)
T ss_pred chHHHHHHHhcc-----Cchhhhhhhhhcce-E----EEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccH
Confidence 999999999887 56777777765542 2 1112224556778889999888876653332 2233333322
Q ss_pred -CCC---------CCCCCCcchhhhHHHHHHHHHHHHHhHh---cCCCeEEEEeeCC
Q 019009 169 -GSG---------GSSTPLTAVYGSTKCGLRQLQASLFKES---KRSKVGVHTASPG 212 (347)
Q Consensus 169 -~~~---------~~~~~~~~~Y~asKaal~~~~~~La~el---~~~gI~v~~i~PG 212 (347)
.-+ ..++-..+.|+++|.+-.-++-..+..| +=.||-+|.=+|-
T Consensus 162 ElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR 218 (376)
T KOG1372|consen 162 ELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR 218 (376)
T ss_pred hhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence 011 1223345789999987654444444333 3347777766663
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00097 Score=58.47 Aligned_cols=222 Identities=14% Similarity=0.112 Sum_probs=127.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS-GD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~-G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...++||||+-+-+|..+|+.|-.+ |- .|++.+.-..... .-..--++-.|+.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-------------------------V~~~GPyIy~DIL 97 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-------------------------VTDVGPYIYLDIL 97 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-------------------------hcccCCchhhhhh
Confidence 3478999999999999999988754 64 5766554322110 0011225667999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|..++++++-. .+||.|||-..... .+. +...--..+||..|.-++++.+..+- -+|..-|.+
T Consensus 98 D~K~L~eIVVn-----~RIdWL~HfSALLS---AvG---E~NVpLA~~VNI~GvHNil~vAa~~k------L~iFVPSTI 160 (366)
T KOG2774|consen 98 DQKSLEEIVVN-----KRIDWLVHFSALLS---AVG---ETNVPLALQVNIRGVHNILQVAAKHK------LKVFVPSTI 160 (366)
T ss_pred ccccHHHhhcc-----cccceeeeHHHHHH---Hhc---ccCCceeeeecchhhhHHHHHHHHcC------eeEeecccc
Confidence 88888877532 38999999765422 111 12233456889999988888776552 234444444
Q ss_pred CCC-----CCCCCC------cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEe-eCCcccCcccccCcccch-----h---
Q 019009 169 GSG-----GSSTPL------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTA-SPGMVLTDLLLSGSTIQN-----K--- 228 (347)
Q Consensus 169 ~~~-----~~~~~~------~~~Y~asKaal~~~~~~La~el~~~gI~v~~i-~PG~v~T~~~~~~~~~~~-----~--- 228 (347)
++- ..+.|. ...|+.||.-.+.+.+.+...+ |+.+-++ .||.+...-......... .
T Consensus 161 GAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~ 237 (366)
T KOG2774|consen 161 GAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQ 237 (366)
T ss_pred cccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccccCCCCCCcchhHHHHHHHHHH
Confidence 331 122232 3579999999999999888775 5555444 466654321111110000 0
Q ss_pred ---------hhhhhccCCHHHHHHHHhhhhhhccc-----cccceeeccchHHHHHHhhhhhc
Q 019009 229 ---------QMFNIICELPETVARTLVPRIRVVKG-----SGKAINYLTPPRILLALVTAWLR 277 (347)
Q Consensus 229 ---------~~~~~~~~~pe~~a~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~ 277 (347)
.-...++..-+++.+.++..+..+.+ .-+...|-..|+..+.-..+.++
T Consensus 238 ~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p 300 (366)
T KOG2774|consen 238 KGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMP 300 (366)
T ss_pred cCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCC
Confidence 00112233467788887776665533 12223343345555555555554
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0016 Score=62.91 Aligned_cols=83 Identities=16% Similarity=0.083 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
..|+|||||++.++|+.+|+.|.+.|++|++++.++.......+-+ .....++..-.+.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~---------------------d~~~~~p~p~~d~ 61 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV---------------------DGFYTIPSPRWDP 61 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh---------------------hheEEeCCCCCCH
Confidence 3589999999999999999999999999999998865432111111 1222232223345
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
+...+.+.++.+++ ++|+||....
T Consensus 62 ~~~~~~L~~i~~~~-~id~vIP~~e 85 (389)
T PRK06849 62 DAYIQALLSIVQRE-NIDLLIPTCE 85 (389)
T ss_pred HHHHHHHHHHHHHc-CCCEEEECCh
Confidence 54444444455554 5899997664
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0032 Score=73.20 Aligned_cols=175 Identities=12% Similarity=0.103 Sum_probs=110.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++.++|++..++++.+++.+|.++|+.|+++..... . ...... ....+..+.+.-.|.+
T Consensus 1755 ~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~---~~~~~~-----------------~~~~~~~~~~~~~~~~ 1813 (2582)
T TIGR02813 1755 GANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-V---SHSASP-----------------LASAIASVTLGTIDDT 1813 (2582)
T ss_pred CceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-c---cccccc-----------------cccccccccccccchH
Confidence 577888888899999999999999999887742111 0 000000 0112223345555667
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++..+++.+....+.++.+||-.+.... ..+.... .+...-...+...|.+.|.+.+.+... .++.++.++.. .
T Consensus 1814 ~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~-~~~~~~~vsr~-~ 1888 (2582)
T TIGR02813 1814 SIEAVIKDIEEKTAQIDGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATN-ARASFVTVSRI-D 1888 (2582)
T ss_pred HHHHHHHhhhccccccceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccC-CCeEEEEEEec-C
Confidence 8888888887777889999997764321 0001111 111111133445678888877776654 46788888876 3
Q ss_pred CCCCCCCcchh--------hhHHHHHHHHHHHHHhHhcCCCeEEEEeeCC
Q 019009 171 GGSSTPLTAVY--------GSTKCGLRQLQASLFKESKRSKVGVHTASPG 212 (347)
Q Consensus 171 ~~~~~~~~~~Y--------~asKaal~~~~~~La~el~~~gI~v~~i~PG 212 (347)
|..++...... ....+++.+|+|++++|+...-+|...+.|.
T Consensus 1889 G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1889 GGFGYSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred CccccCCccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence 44443221111 2357899999999999998877888888775
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0014 Score=61.60 Aligned_cols=111 Identities=9% Similarity=0.058 Sum_probs=69.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEe
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA 84 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (347)
+|.||||+|.+|..++..|+.+|. .+++.++++ +.++.. .
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~-------------------------------~ 50 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV-------------------------------V 50 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee-------------------------------e
Confidence 589999999999999999998772 499999987 443333 3
Q ss_pred cCCCCHHHH--H--HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-CCC
Q 019009 85 CDVCEPADV--Q--KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKG 159 (347)
Q Consensus 85 ~Dls~~~~v--~--~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-~~~ 159 (347)
.|+.|.... . .+.....+.+.+.|++|+.||... .+ ..+. ...+..| ..+++.+.+.+.+. +..
T Consensus 51 ~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~--~~--g~tR---~dll~~N----~~i~~~i~~~i~~~~~~~ 119 (323)
T cd00704 51 MELQDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPR--KP--GMER---ADLLRKN----AKIFKEQGEALNKVAKPT 119 (323)
T ss_pred eehhhhcccccCCcEEecChHHHhCCCCEEEEeCCCCC--Cc--CCcH---HHHHHHh----HHHHHHHHHHHHHhCCCC
Confidence 333332100 0 000112233357899999999854 22 2232 3345555 45677778887776 356
Q ss_pred cEEEEEc
Q 019009 160 GHIFNMD 166 (347)
Q Consensus 160 g~Iv~vs 166 (347)
+.|+++|
T Consensus 120 ~iiivvs 126 (323)
T cd00704 120 VKVLVVG 126 (323)
T ss_pred eEEEEeC
Confidence 7777775
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0013 Score=61.89 Aligned_cols=113 Identities=14% Similarity=0.119 Sum_probs=70.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
+|.|+||+|.+|..++..|+..|. .+++.++++... .......|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------------------------~a~g~~~D 51 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------------------------VLEGVVME 51 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------------------------ccceeEee
Confidence 479999999999999999998663 599999865420 12233445
Q ss_pred CCCHHH-HH-HH--HHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-CCCcE
Q 019009 87 VCEPAD-VQ-KL--SNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH 161 (347)
Q Consensus 87 ls~~~~-v~-~~--~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-~~~g~ 161 (347)
+.|... .. .. .....+.+...|++|+.||... .+ . +.....+..|+ .+.+.+.+.+.+. +..+.
T Consensus 52 l~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~--~~--~---~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~i 120 (324)
T TIGR01758 52 LMDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPR--KE--G---MERRDLLSKNV----KIFKEQGRALDKLAKKDCK 120 (324)
T ss_pred hhcccchhcCceeccCChHHHhCCCCEEEEcCCCCC--CC--C---CcHHHHHHHHH----HHHHHHHHHHHhhCCCCeE
Confidence 554431 10 00 0011234457999999999754 11 1 22455666664 5667777777765 24677
Q ss_pred EEEEc
Q 019009 162 IFNMD 166 (347)
Q Consensus 162 Iv~vs 166 (347)
|+++|
T Consensus 121 iivvs 125 (324)
T TIGR01758 121 VLVVG 125 (324)
T ss_pred EEEeC
Confidence 77775
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00046 Score=67.82 Aligned_cols=47 Identities=21% Similarity=0.099 Sum_probs=37.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~ 58 (347)
.+|+++|||+++ +|.++|+.|++.|++|++.+++........+++++
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~ 50 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE 50 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence 368999999985 99999999999999999999876544444444543
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.012 Score=55.17 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=77.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.++++.|+|+ |++|..+|..|+..|. ++++.++++++++..+.++....+- . .++... . .
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~-------------~-~~~~i~-~--~ 66 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPF-------------T-SPTKIY-A--G 66 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccc-------------c-CCeEEE-e--C
Confidence 3578999998 9999999999999995 7999999999988888888764210 0 122221 1 2
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+.++ +..-|++|..||... .+ ..+. ...++.|. .+.+.+.+.+.+....+.++++|
T Consensus 67 ~~~~-----------~~~adivIitag~~~--k~--g~~R---~dll~~N~----~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 67 DYSD-----------CKDADLVVITAGAPQ--KP--GETR---LDLVEKNL----KIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred CHHH-----------hCCCCEEEEecCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEcc
Confidence 2221 236899999999854 22 2333 23444453 45566666666654567777775
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0014 Score=56.32 Aligned_cols=77 Identities=21% Similarity=0.156 Sum_probs=47.7
Q ss_pred CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 019009 11 CTCRWFSVVS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74 (347)
Q Consensus 11 ~~k~vlITGa----------------s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 74 (347)
.||+||||+| ||-+|.++|+++..+|++|+++..... +.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~------------------------ 56 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP------------------------ 56 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------------------
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc------------------------
Confidence 3689999985 568999999999999999999987632 10
Q ss_pred ccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 75 ~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
.+..+..+ ++.+.+++.+.+.+. +..-|++|++|.+..
T Consensus 57 -~p~~~~~i--~v~sa~em~~~~~~~---~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 57 -PPPGVKVI--RVESAEEMLEAVKEL---LPSADIIIMAAAVSD 94 (185)
T ss_dssp ---TTEEEE--E-SSHHHHHHHHHHH---GGGGSEEEE-SB--S
T ss_pred -ccccceEE--Eecchhhhhhhhccc---cCcceeEEEecchhh
Confidence 11234333 456666666555544 344599999999876
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0025 Score=58.78 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=41.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~ 58 (347)
.+|+++|.|+ ||.|++++..|++.|. +|++++|+.++.++..+++..
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~ 173 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA 173 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence 3589999997 5899999999999997 799999999999888887754
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0011 Score=61.01 Aligned_cols=76 Identities=20% Similarity=0.196 Sum_probs=61.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
..++|-||++--|.-+|++|+++|.+-.+.+||..++..+.+.| +.+...+++++ ++.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L--------------------G~~~~~~p~~~--p~~ 64 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL--------------------GPEAAVFPLGV--PAA 64 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc--------------------CccccccCCCC--HHH
Confidence 57999999999999999999999999999999999998777665 23444455554 666
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
++++++ +.++|+||+|-.
T Consensus 65 ~~~~~~-------~~~VVlncvGPy 82 (382)
T COG3268 65 LEAMAS-------RTQVVLNCVGPY 82 (382)
T ss_pred HHHHHh-------cceEEEeccccc
Confidence 666554 679999999854
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0014 Score=61.35 Aligned_cols=35 Identities=17% Similarity=0.178 Sum_probs=28.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-C--CCeEEEEeCChh
Q 019009 13 CRWFSVVSTRGLGKALAREFLL-S--GDRVVVASRSSE 47 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~-~--G~~Vil~~R~~~ 47 (347)
+.++|.||+++||.+++..|.. . +..+++.+|++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~ 38 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV 38 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence 4689999999999999998855 3 357888888753
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00077 Score=58.88 Aligned_cols=43 Identities=21% Similarity=0.155 Sum_probs=37.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT 54 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~ 54 (347)
.||+++|+|.+ .+|+.+|+.|.+.|++|++.+++++++++..+
T Consensus 27 ~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~ 69 (200)
T cd01075 27 EGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE 69 (200)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 46999999996 89999999999999999999999877665544
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0012 Score=60.76 Aligned_cols=46 Identities=15% Similarity=0.165 Sum_probs=40.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELE 57 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~ 57 (347)
.+|+++|+|+ ||+|+++++.|+..| .+|++++|+.++.+++.+++.
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 4689999997 899999999999999 799999999998887776654
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0016 Score=61.06 Aligned_cols=150 Identities=11% Similarity=0.083 Sum_probs=95.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
++|.|+|++|.+|..+|..|+..|. ++++.+.++. +++..+.++...... ...++. +
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-------------~~~~~~-i 68 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFP-------------LLAEIV-I 68 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhcccc-------------ccCceE-E
Confidence 5789999999999999999998884 6999998543 355555555442100 000111 1
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHI 162 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~I 162 (347)
. -.+ .+.+..-|++|..||... .+ ..+. ...++.|+ .+.+.+.+.+.+.. ..+.|
T Consensus 69 ~--~~~-----------~~~~~daDivvitaG~~~--k~--g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~ii 124 (322)
T cd01338 69 T--DDP-----------NVAFKDADWALLVGAKPR--GP--GMER---ADLLKANG----KIFTAQGKALNDVASRDVKV 124 (322)
T ss_pred e--cCc-----------HHHhCCCCEEEEeCCCCC--CC--CCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEE
Confidence 1 111 122236899999999853 22 2332 33455554 56677777777765 36777
Q ss_pred EEEcCCC-------CCCC-CCCCcchhhhHHHHHHHHHHHHHhHhc
Q 019009 163 FNMDGAG-------SGGS-STPLTAVYGSTKCGLRQLQASLFKESK 200 (347)
Q Consensus 163 v~vsS~~-------~~~~-~~~~~~~Y~asKaal~~~~~~La~el~ 200 (347)
+++|-.. .-.. +.|....|+.++.--..|...+++.+.
T Consensus 125 ivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg 170 (322)
T cd01338 125 LVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG 170 (322)
T ss_pred EEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence 7776321 0123 366667899999999999999999875
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0049 Score=59.05 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=53.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++++|.|+ |.+|+..++.+...|++|++++|++++++.+.+.+ +.. +..+..+.+
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~--------------------g~~---v~~~~~~~~ 222 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF--------------------GGR---IHTRYSNAY 222 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc--------------------Cce---eEeccCCHH
Confidence 356888887 68999999999999999999999988765443322 111 223455555
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
.+.+.+ ...|++|++++..
T Consensus 223 ~l~~~l-------~~aDvVI~a~~~~ 241 (370)
T TIGR00518 223 EIEDAV-------KRADLLIGAVLIP 241 (370)
T ss_pred HHHHHH-------ccCCEEEEccccC
Confidence 554443 2579999998763
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0024 Score=60.08 Aligned_cols=42 Identities=21% Similarity=0.117 Sum_probs=34.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
...|.++||+||+||+|....+.+...|++++++..++++.+
T Consensus 140 l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~ 181 (326)
T COG0604 140 LKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181 (326)
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence 455899999999999999999988899987777776666554
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.011 Score=58.67 Aligned_cols=41 Identities=12% Similarity=-0.057 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+.+|+|+|++ .+|+..+..+...|++|+++++++++++.+
T Consensus 164 pg~kVlViGaG-~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a 204 (509)
T PRK09424 164 PPAKVLVIGAG-VAGLAAIGAAGSLGAIVRAFDTRPEVAEQV 204 (509)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46899999975 899999999999999999999999887644
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0013 Score=66.05 Aligned_cols=45 Identities=29% Similarity=0.332 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|+|+ +|+|++++..|+++|++|++++|+.++.++..+++
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 3589999999 59999999999999999999999988877665543
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.003 Score=58.19 Aligned_cols=46 Identities=15% Similarity=0.121 Sum_probs=40.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELE 57 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~ 57 (347)
.+|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+++.
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 4689999986 7999999999999996 79999999999888777653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0024 Score=60.15 Aligned_cols=44 Identities=20% Similarity=0.173 Sum_probs=37.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV 53 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~ 53 (347)
..|.+++|+||++++|.++++.+...|++|+.+++++++.+.+.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK 193 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 46799999999999999999888889999999999887765443
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0082 Score=53.92 Aligned_cols=41 Identities=22% Similarity=0.221 Sum_probs=35.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
..+++++|+|+++ +|.++++.+...|.+|+++++++++.+.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4578999999998 9999999999999999999998766543
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0051 Score=57.31 Aligned_cols=43 Identities=19% Similarity=0.177 Sum_probs=37.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
...+.+++|+||++++|+++++.+...|++|+.+.+++++.+.
T Consensus 160 ~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~ 202 (332)
T cd08259 160 VKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI 202 (332)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 4557899999999999999999999999999999988776543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0044 Score=57.07 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=40.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~ 58 (347)
+|+++|.|| ||-|++++..|++.|+ +|+++.|+.++.+++.+++..
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~ 173 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN 173 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 589999998 7999999999999996 799999999998888777643
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0057 Score=58.00 Aligned_cols=84 Identities=19% Similarity=0.202 Sum_probs=57.2
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+++.|+.+||.||++|+|.+..+.+...|+..++++++.++++ .++++ +.. ...|
T Consensus 153 ~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l--------------------GAd---~vvd 208 (347)
T KOG1198|consen 153 KKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL--------------------GAD---EVVD 208 (347)
T ss_pred cccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc--------------------CCc---Eeec
Confidence 46788999999999999999999988889965555665555442 22222 211 2457
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
..+++-++.+.+.. .+++|+++-|.|..
T Consensus 209 y~~~~~~e~~kk~~---~~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 209 YKDENVVELIKKYT---GKGVDVVLDCVGGS 236 (347)
T ss_pred CCCHHHHHHHHhhc---CCCccEEEECCCCC
Confidence 77744444443322 46899999999863
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0056 Score=56.36 Aligned_cols=42 Identities=19% Similarity=0.175 Sum_probs=37.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
..+++++|+|+++++|.++++.+...|++|++++++.++.+.
T Consensus 138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~ 179 (323)
T cd05276 138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEA 179 (323)
T ss_pred CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 457899999999999999999999999999999998776544
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0083 Score=56.71 Aligned_cols=79 Identities=18% Similarity=0.250 Sum_probs=56.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---------------------hHHHHHHHHHHHHhhhhhhhcCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS---------------------ESVRMTVTELEENLKEGMMAAGG 69 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~---------------------~~l~~~~~~l~~~~~~~~~~~~~ 69 (347)
.++|+|.|+ ||+|..+|+.|++.|. ++++++++. .|.+.+.+.+++.+
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in--------- 93 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN--------- 93 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC---------
Confidence 478999997 6899999999999997 899999874 34455556666543
Q ss_pred CCcccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 70 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 70 ~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
...++..+..|++. +.+++++ ...|++|.+.
T Consensus 94 ------p~v~i~~~~~~~~~-~~~~~~~-------~~~DlVid~~ 124 (338)
T PRK12475 94 ------SEVEIVPVVTDVTV-EELEELV-------KEVDLIIDAT 124 (338)
T ss_pred ------CCcEEEEEeccCCH-HHHHHHh-------cCCCEEEEcC
Confidence 23567777778763 3444443 3579888766
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0031 Score=59.92 Aligned_cols=43 Identities=21% Similarity=0.185 Sum_probs=37.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
..|.+++|+||++++|...++.+...|++|+.+++++++.+.+
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~ 199 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 199 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 4578999999999999999988888999999999888776543
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0041 Score=58.18 Aligned_cols=43 Identities=21% Similarity=0.158 Sum_probs=37.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
..|.++||+||++++|.++++.+...|++|+.+++++++.+.+
T Consensus 137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~ 179 (325)
T TIGR02825 137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL 179 (325)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 4578999999999999999988888999999999988765443
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.019 Score=49.08 Aligned_cols=124 Identities=19% Similarity=0.150 Sum_probs=71.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..++++|-.|++.|. ++..++++|.+|+.++++++.++.+.+.+..... ....+.++.+|+.+
T Consensus 22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--------------~~~~~~~~~~d~~~ 84 (188)
T PRK14968 22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNI--------------RNNGVEVIRSDLFE 84 (188)
T ss_pred cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCC--------------CCcceEEEeccccc
Confidence 356889999987776 5666666789999999999887776665544210 01116777888754
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHH---HHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS---ILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~---~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
. +.+ ..+|+++.|..+.. ..+.... .+.+...+..+..+. -.+++.+.+.|+. +|.++++.
T Consensus 85 ~---------~~~--~~~d~vi~n~p~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~---gG~~~~~~ 148 (188)
T PRK14968 85 P---------FRG--DKFDVILFNPPYLP-TEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP---GGRILLLQ 148 (188)
T ss_pred c---------ccc--cCceEEEECCCcCC-CCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC---CeEEEEEE
Confidence 2 111 26899999987643 1222111 122222222222222 2356666677753 56665553
|
|
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.11 Score=47.19 Aligned_cols=178 Identities=13% Similarity=0.116 Sum_probs=104.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEe--C-----ChhH----HHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 019009 11 CTCRWFSVVSTRGLGKALAREFL-LSGDRVVVAS--R-----SSES----VRMTVTELEENLKEGMMAAGGSSKKNLVHA 78 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la-~~G~~Vil~~--R-----~~~~----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 78 (347)
+.|+|||.|+|+|.|++.=..++ ..|++-+.+. | ++-. .+...++..+. .+-
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~----------------kGl 103 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ----------------KGL 103 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh----------------cCc
Confidence 45999999999999998644333 1455544432 2 1110 11122222111 344
Q ss_pred eeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCC---------------------------------CCCC
Q 019009 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK---------------------------------PLLQ 125 (347)
Q Consensus 79 ~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~---------------------------------~~~~ 125 (347)
-..-+..|.-+.+--++.++.|.+.+|.+|.+|..-..+.... .+..
T Consensus 104 yAksingDaFS~e~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lep 183 (398)
T COG3007 104 YAKSINGDAFSDEMKQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEP 183 (398)
T ss_pred eeeecccchhhHHHHHHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeeccc
Confidence 5667788999888889999999999999999988765432111 1122
Q ss_pred CCHHHHHHHHHhhhhHHH-HHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCC--CcchhhhHHHHHHHHHHHHHhHhcCC
Q 019009 126 FTNEEIEQIVSTNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP--LTAVYGSTKCGLRQLQASLFKESKRS 202 (347)
Q Consensus 126 ~~~e~~~~~~~vN~~g~~-~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~--~~~~Y~asKaal~~~~~~La~el~~~ 202 (347)
.+.++++.+..|.=---+ +.+.+++..-.-. .+.+-|-.|-++ ....+| ..+.-+.+|.=|+.-++.+...|+..
T Consensus 184 AseqEI~~Tv~VMGGeDWq~WidaLl~advla-eg~kTiAfsYiG-~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~ 261 (398)
T COG3007 184 ASEQEIADTVAVMGGEDWQMWIDALLEADVLA-EGAKTIAFSYIG-EKITHPIYWDGTIGRAKKDLDQKSLAINEKLAAL 261 (398)
T ss_pred ccHHHHHHHHHhhCcchHHHHHHHHHhccccc-cCceEEEEEecC-CccccceeeccccchhhhcHHHHHHHHHHHHHhc
Confidence 345566666555322222 1233333321112 355666666553 333333 23567999999999999999999876
Q ss_pred CeEE
Q 019009 203 KVGV 206 (347)
Q Consensus 203 gI~v 206 (347)
|=+.
T Consensus 262 gG~A 265 (398)
T COG3007 262 GGGA 265 (398)
T ss_pred CCCe
Confidence 5343
|
|
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0018 Score=46.51 Aligned_cols=36 Identities=14% Similarity=0.060 Sum_probs=23.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFL-LSGDRVVVASRS 45 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la-~~G~~Vil~~R~ 45 (347)
...|+|||+|+|+|.|+|....++ ..|++.+.++..
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE 73 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE 73 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence 445999999999999999444444 678888887754
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0034 Score=56.90 Aligned_cols=73 Identities=16% Similarity=0.264 Sum_probs=53.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++||+|||+- |+.+++.|.++|++|++..++....+... + .....+..+..|.+++
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~-------------------~g~~~v~~g~l~~~~l 57 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----I-------------------HQALTVHTGALDPQEL 57 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----c-------------------cCCceEEECCCCHHHH
Confidence 6899999987 99999999999999999999876432211 0 1123455677777777
Q ss_pred HHHHHHHHhhcCCccEEEEcCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG 115 (347)
.+++.+ .++|+||+.+.
T Consensus 58 ~~~l~~-----~~i~~VIDAtH 74 (256)
T TIGR00715 58 REFLKR-----HSIDILVDATH 74 (256)
T ss_pred HHHHHh-----cCCCEEEEcCC
Confidence 766643 27999998773
|
This enzyme was found to be a monomer by gel filtration. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0061 Score=55.58 Aligned_cols=114 Identities=16% Similarity=0.226 Sum_probs=72.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCC----CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCccccc-CceeeEEecCCCC
Q 019009 15 WFSVVSTRGLGKALAREFLLSG----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV-HAKVAGIACDVCE 89 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G----~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dls~ 89 (347)
+.|+||+|.+|..++..|+..| .+|++.++++++++....+++..... . ..++. .++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~-------------~~~~~i~-----~~~ 62 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP-------------LADIKVS-----ITD 62 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh-------------ccCcEEE-----ECC
Confidence 4799998899999999999999 79999999999888888887664211 0 01111 111
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+..+. +...|++|..+|.... + ..+. ...+. ...-+.+...+.+.+....+.++++|
T Consensus 63 --d~~~~-------~~~aDiVv~t~~~~~~--~--g~~r---~~~~~----~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 63 --DPYEA-------FKDADVVIITAGVGRK--P--GMGR---LDLLK----RNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred --chHHH-------hCCCCEEEECCCCCCC--c--CCCH---HHHHH----HHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 11111 2368999999997541 1 1221 11222 23445666667776655567787775
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0076 Score=56.77 Aligned_cols=42 Identities=19% Similarity=0.067 Sum_probs=35.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVT 54 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~ 54 (347)
.++||+||++++|.++++.+...|+ +|+.+++++++.+.+.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~ 198 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS 198 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 8999999999999999888888998 79999998877654443
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0065 Score=58.98 Aligned_cols=45 Identities=13% Similarity=0.191 Sum_probs=38.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|.|+ ||+|+++++.|+..|. +++++.|+.++.++..+++
T Consensus 180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~ 225 (414)
T PRK13940 180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF 225 (414)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence 3689999998 8999999999999995 7999999988876665543
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0065 Score=55.76 Aligned_cols=47 Identities=21% Similarity=0.248 Sum_probs=41.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~ 58 (347)
.+++++|.||+ |-+++++..|++.|. +|+++.|+.++.+++.+.+.+
T Consensus 125 ~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~ 172 (283)
T COG0169 125 TGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGE 172 (283)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence 36899999975 899999999999995 799999999999988887765
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.022 Score=53.26 Aligned_cols=119 Identities=13% Similarity=0.160 Sum_probs=69.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+++.|+|+++.+|..++..|+..|. +|++++|++ ++++....++.+.... .+... .+..+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~-------------~~~~~---~i~~~ 64 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAA-------------AGIDA---EIKIS 64 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhc-------------cCCCc---EEEEC
Confidence 3689999999999999999999985 599999965 5555555555432110 01111 11111
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+ +... +...|++|.++|... . ...+. ...++.|+. +++.+.+.|.+....+.||++++.
T Consensus 65 ~--d~~~--------l~~aDiViitag~p~--~--~~~~r---~dl~~~n~~----i~~~~~~~i~~~~~~~~viv~~np 123 (309)
T cd05294 65 S--DLSD--------VAGSDIVIITAGVPR--K--EGMSR---LDLAKKNAK----IVKKYAKQIAEFAPDTKILVVTNP 123 (309)
T ss_pred C--CHHH--------hCCCCEEEEecCCCC--C--CCCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCc
Confidence 1 1111 136899999999753 2 12232 233444443 445555555544346778887653
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.054 Score=48.37 Aligned_cols=146 Identities=16% Similarity=0.180 Sum_probs=81.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
.++|+|.|.+ |+|.++++.|++.|. ++++++.+. .|.+...+.+.+.+
T Consensus 11 ~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~in----------- 78 (231)
T cd00755 11 NAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDIN----------- 78 (231)
T ss_pred CCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHC-----------
Confidence 3788999875 999999999999996 899988653 13333344444432
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMR 151 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp 151 (347)
...++..+...++ .+....++. ...|++|.+... +. .-..+.+.+..
T Consensus 79 ----P~~~V~~~~~~i~-~~~~~~l~~------~~~D~VvdaiD~--------------~~--------~k~~L~~~c~~ 125 (231)
T cd00755 79 ----PECEVDAVEEFLT-PDNSEDLLG------GDPDFVVDAIDS--------------IR--------AKVALIAYCRK 125 (231)
T ss_pred ----CCcEEEEeeeecC-HhHHHHHhc------CCCCEEEEcCCC--------------HH--------HHHHHHHHHHH
Confidence 2245555555554 233333321 257888876521 01 11122233322
Q ss_pred HhHcCCCCcEEEEEcCCCCCCCCCCCcc-hhhhHHHHHHHHHHHHHhHhcCCCeE--EEEee
Q 019009 152 VMRDQPKGGHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKRSKVG--VHTAS 210 (347)
Q Consensus 152 ~l~~~~~~g~Iv~vsS~~~~~~~~~~~~-~Y~asKaal~~~~~~La~el~~~gI~--v~~i~ 210 (347)
. + |-+|++.+++....|... .=-.+|.-..-|++.++++|++.||+ +.+|.
T Consensus 126 ----~--~--ip~I~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~ 179 (231)
T cd00755 126 ----R--K--IPVISSMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY 179 (231)
T ss_pred ----h--C--CCEEEEeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence 1 1 223333334444334332 22345556678899999999988875 54443
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.089 Score=48.84 Aligned_cols=38 Identities=24% Similarity=0.228 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESV 49 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l 49 (347)
.+++++|.|. |++|+.+++.|.+.|++|++++|++++.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~ 188 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL 188 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 4799999997 6799999999999999999999997654
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.071 Score=48.64 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=28.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~ 45 (347)
+.+|+|.|++ |+|.++|+.|++.| -++.+++.+
T Consensus 30 ~s~VlVvG~G-GVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 30 DAHICVVGIG-GVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred CCCEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4788888765 99999999999999 589998865
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.049 Score=53.17 Aligned_cols=122 Identities=11% Similarity=0.126 Sum_probs=82.4
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHC-------CC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLS-------GD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~-------G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 77 (347)
.+|+.--+|.|+|++|-+|.++|..|+.. |. +++++++++++++..+-+|+..... ..
T Consensus 95 ~~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~-------------~~ 161 (444)
T PLN00112 95 KSWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP-------------LL 161 (444)
T ss_pred hcCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh-------------hc
Confidence 46776678999999999999999999988 63 7999999999999888888774311 01
Q ss_pred ceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHc-C
Q 019009 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD-Q 156 (347)
Q Consensus 78 ~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~-~ 156 (347)
.++. +.. .+.+ .+...|++|..||... .+ ..+. ...++.|. .+.+...+.+.+ .
T Consensus 162 ~~v~-i~~--~~ye-----------~~kdaDiVVitAG~pr--kp--G~tR---~dLl~~N~----~I~k~i~~~I~~~a 216 (444)
T PLN00112 162 REVS-IGI--DPYE-----------VFQDAEWALLIGAKPR--GP--GMER---ADLLDING----QIFAEQGKALNEVA 216 (444)
T ss_pred CceE-Eec--CCHH-----------HhCcCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhc
Confidence 1111 111 1222 2236899999999853 22 2232 34555554 466777777776 4
Q ss_pred CCCcEEEEEc
Q 019009 157 PKGGHIFNMD 166 (347)
Q Consensus 157 ~~~g~Iv~vs 166 (347)
+..+.||++|
T Consensus 217 ~p~~ivIVVs 226 (444)
T PLN00112 217 SRNVKVIVVG 226 (444)
T ss_pred CCCeEEEEcC
Confidence 4567777775
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.01 Score=54.84 Aligned_cols=39 Identities=28% Similarity=0.308 Sum_probs=34.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
.||+++|.|. |++|+++|+.|...|++|++.+|++++++
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~ 188 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA 188 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4699999999 56999999999999999999999987643
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.015 Score=54.25 Aligned_cols=42 Identities=12% Similarity=0.102 Sum_probs=36.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
..|.+++|+||++++|.++++.+...|++|+.+++++++.+.
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~ 183 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAW 183 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 457899999999999999988888899999999998876543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.026 Score=49.29 Aligned_cols=79 Identities=16% Similarity=0.249 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
.++|+|.|+ +|+|.++|+.|+..|. ++++++.+ ..|.+.+.+.+++.++
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------- 89 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS---------- 89 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC----------
Confidence 478899985 5999999999999996 89999987 2445555566655432
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
..++..+..++.+ +.+.+++ ...|++|.+.
T Consensus 90 -----~v~i~~~~~~i~~-~~~~~~~-------~~~D~Vi~~~ 119 (202)
T TIGR02356 90 -----DIQVTALKERVTA-ENLELLI-------NNVDLVLDCT 119 (202)
T ss_pred -----CCEEEEehhcCCH-HHHHHHH-------hCCCEEEECC
Confidence 2455555555543 3333332 3679998876
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.035 Score=55.13 Aligned_cols=39 Identities=13% Similarity=-0.037 Sum_probs=34.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
+.+++|.|+ |.+|...+..+...|++|++++++.++++.
T Consensus 164 ~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~ 202 (511)
T TIGR00561 164 PAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQ 202 (511)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 468999996 799999999999999999999999887654
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.012 Score=62.90 Aligned_cols=78 Identities=15% Similarity=0.134 Sum_probs=60.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSG-DR-------------VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 75 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G-~~-------------Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 75 (347)
..+|+|+|.|| |.||...|+.|++.. +. |++++++.++++++.+.+
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------------------- 626 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------------------- 626 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-------------------
Confidence 34689999997 889999999999864 33 888999988776555432
Q ss_pred cCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 76 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 76 ~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.++..+.+|++|.+++.++++ .+|+||++...
T Consensus 627 --~~~~~v~lDv~D~e~L~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 627 --ENAEAVQLDVSDSESLLKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred --CCCceEEeecCCHHHHHHhhc-------CCCEEEECCCc
Confidence 135678999999988877765 58999998864
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.016 Score=54.44 Aligned_cols=118 Identities=13% Similarity=0.134 Sum_probs=72.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++.|+|| |.+|..++..++..| .+|++.++++++++...-++...... .+... .+.. -+|.
T Consensus 5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~-------------~~~~~-~i~~-~~d~ 68 (319)
T PTZ00117 5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTL-------------VGSNI-NILG-TNNY 68 (319)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccc-------------cCCCe-EEEe-CCCH
Confidence 467899997 789999999999999 78999999987765443333221000 01111 1111 1222
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+ .+ ..-|++|.++|... .+ ..+. ...+..|. .+.+.+.+.|.+....+.++++|-
T Consensus 69 ~---~l--------~~ADiVVitag~~~--~~--g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 69 E---DI--------KDSDVVVITAGVQR--KE--EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred H---Hh--------CCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence 2 11 25799999999754 22 2222 34555565 466777777776655667777753
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.028 Score=53.23 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=30.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~ 46 (347)
.++|+|.|+ ||+|..+|+.|++.|. +|.+++++.
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 478999998 6999999999999997 899999863
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.016 Score=53.51 Aligned_cols=46 Identities=9% Similarity=0.066 Sum_probs=37.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---hHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTELE 57 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~---~~l~~~~~~l~ 57 (347)
.+|+++|.|+ ||-+++++..|+..|. +|+++.|++ ++.+++.+++.
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 4689999997 6779999999999996 899999995 46666655553
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.035 Score=51.91 Aligned_cols=116 Identities=13% Similarity=0.088 Sum_probs=75.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
..|.|+|+ |.+|..+|..|+..| .+++++++++++++..+.++....+- ... ...... .|.
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~-------------~~~-~~v~~~--~dy 66 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAF-------------LKN-PKIEAD--KDY 66 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhcc-------------CCC-CEEEEC--CCH
Confidence 57899996 999999999999888 47999999998888888888764210 001 111111 222
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++ +...|++|..||... .+ ..+. ...+..|. .+.+.+.+.+.+....+.++++|-
T Consensus 67 ~~-----------~~~adivvitaG~~~--k~--g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 67 SV-----------TANSKVVIVTAGARQ--NE--GESR---LDLVQRNV----DIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred HH-----------hCCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCcEEEEccC
Confidence 21 136799999999754 22 2333 23444443 456666777766656778888863
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.021 Score=55.78 Aligned_cols=44 Identities=18% Similarity=0.272 Sum_probs=37.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~ 55 (347)
.+++++|.|+ |++|..+++.|...|+ +|++++|++++.++..++
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~ 225 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE 225 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence 4689999987 8999999999999997 799999999877655544
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.013 Score=52.21 Aligned_cols=75 Identities=17% Similarity=0.286 Sum_probs=56.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+.++|.|++ -+|+.+|+.|.++|+.|+++.+++++.++...+ ......+..|-++++.
T Consensus 1 m~iiIiG~G-~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------------------~~~~~~v~gd~t~~~~ 58 (225)
T COG0569 1 MKIIIIGAG-RVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------------------ELDTHVVIGDATDEDV 58 (225)
T ss_pred CEEEEECCc-HHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------------------hcceEEEEecCCCHHH
Confidence 357777776 599999999999999999999999987664331 1246778899999887
Q ss_pred HHHHHHHHHhhcCCccEEEEcCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG 115 (347)
++++= ....|++|-..|
T Consensus 59 L~~ag------i~~aD~vva~t~ 75 (225)
T COG0569 59 LEEAG------IDDADAVVAATG 75 (225)
T ss_pred HHhcC------CCcCCEEEEeeC
Confidence 77751 125678876655
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.022 Score=55.54 Aligned_cols=44 Identities=18% Similarity=0.308 Sum_probs=37.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~ 55 (347)
.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..++
T Consensus 179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~ 223 (417)
T TIGR01035 179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE 223 (417)
T ss_pred cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 4689999997 899999999999999 6899999998876655443
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.028 Score=54.01 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=54.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
+++|+|.|+ ||+|.++++.|++.|. ++++++++ ..|.+.+.+.+++.++
T Consensus 135 ~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------- 203 (376)
T PRK08762 135 EARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP---------- 203 (376)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC----------
Confidence 467888866 6999999999999997 79999987 4566666666665432
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
..++..+...+++ +.+..++ ...|++|++..
T Consensus 204 -----~v~v~~~~~~~~~-~~~~~~~-------~~~D~Vv~~~d 234 (376)
T PRK08762 204 -----DVQVEAVQERVTS-DNVEALL-------QDVDVVVDGAD 234 (376)
T ss_pred -----CCEEEEEeccCCh-HHHHHHH-------hCCCEEEECCC
Confidence 2345555555543 3333333 25799888763
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.021 Score=52.72 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=36.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
..+++++|+|+++++|.++++.+...|++|+++.+++++.+
T Consensus 138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
T TIGR02824 138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA 178 (325)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45789999999999999999999999999999999877654
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.024 Score=53.60 Aligned_cols=40 Identities=20% Similarity=0.168 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
.|++++|+|+ +++|...++.+...|+ +|+++++++++++.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~ 209 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSL 209 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHH
Confidence 4789999986 8999999988888998 68889999887653
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.017 Score=54.35 Aligned_cols=117 Identities=11% Similarity=0.082 Sum_probs=72.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeE
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (347)
.+.|.|+|++|.+|..+|..|+..|. .+++.++++. +++..+.++...... ...++.
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~-------------~~~~~~- 69 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFP-------------LLAGVV- 69 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhh-------------hcCCcE-
Confidence 46889999999999999999998773 6999998543 455555555543200 001111
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcE
Q 019009 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGH 161 (347)
Q Consensus 83 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~ 161 (347)
+.. .+ .+.+..-|++|..||... .+ ..+ -...++.|. .+.+.+.+.+.+.. ..+.
T Consensus 70 i~~--~~-----------y~~~~daDiVVitaG~~~--k~--g~t---R~dll~~Na----~i~~~i~~~i~~~~~~~~i 125 (326)
T PRK05442 70 ITD--DP-----------NVAFKDADVALLVGARPR--GP--GME---RKDLLEANG----AIFTAQGKALNEVAARDVK 125 (326)
T ss_pred Eec--Ch-----------HHHhCCCCEEEEeCCCCC--CC--CCc---HHHHHHHHH----HHHHHHHHHHHHhCCCCeE
Confidence 111 11 222346899999999753 22 222 244555554 46677777777632 3677
Q ss_pred EEEEc
Q 019009 162 IFNMD 166 (347)
Q Consensus 162 Iv~vs 166 (347)
|+++|
T Consensus 126 iivvs 130 (326)
T PRK05442 126 VLVVG 130 (326)
T ss_pred EEEeC
Confidence 77775
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.02 Score=57.20 Aligned_cols=44 Identities=27% Similarity=0.415 Sum_probs=38.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l 56 (347)
+++++|.|+ |++|..+++.|...|+ +|+++.|+.++.+...+++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 589999999 8999999999999996 7999999998877665543
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.06 Score=50.09 Aligned_cols=113 Identities=17% Similarity=0.196 Sum_probs=72.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+.|.|+ +++|..+|..|+..| .+++++++++++++....+|...... . .......+ .|.+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~-------------~-~~~~i~~~--~~~~- 62 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAF-------------L-ATGTIVRG--GDYA- 62 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccc-------------c-CCCeEEEC--CCHH-
Confidence 357887 579999999999999 57999999999988888888764210 0 11111111 2211
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.+..-|++|.+||... .+ ..+. ...+..| ..+.+.+.+.+++....+.|+++|
T Consensus 63 ----------~l~~aDiVIitag~p~--~~--~~~R---~~l~~~n----~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 63 ----------DAADADIVVITAGAPR--KP--GETR---LDLINRN----APILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred ----------HhCCCCEEEEcCCCCC--CC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEcc
Confidence 1136899999999854 22 2222 2333334 456677777777665677888876
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.039 Score=46.38 Aligned_cols=92 Identities=16% Similarity=0.074 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++|-+.|- +-+|..+|+.|+++|++|++.+|++++.++..++--....+ +...-.+...+-.=+.+.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s----------~~e~~~~~dvvi~~v~~~~ 69 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADS----------PAEAAEQADVVILCVPDDD 69 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESS----------HHHHHHHBSEEEE-SSSHH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhh----------hhhHhhcccceEeecccch
Confidence 357888887 68999999999999999999999998887665431000000 0000012344555678888
Q ss_pred HHHHHHHH--HHhhcCCccEEEEcC
Q 019009 92 DVQKLSNF--AVNEFGSIDIWINNA 114 (347)
Q Consensus 92 ~v~~~~~~--i~~~~g~iD~li~nA 114 (347)
++++++.. +.....+=+++|++.
T Consensus 70 ~v~~v~~~~~i~~~l~~g~iiid~s 94 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPGKIIIDMS 94 (163)
T ss_dssp HHHHHHHCTTHGGGS-TTEEEEE-S
T ss_pred hhhhhhhhhHHhhccccceEEEecC
Confidence 99998887 665543445666544
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.18 Score=47.92 Aligned_cols=115 Identities=14% Similarity=0.176 Sum_probs=75.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+.|.|+|+ |.+|..+|..|+..|. ++++++.++++++..+.++....+- . ... .+..+ .+.
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~-------------~-~~~-~i~~~-~dy 100 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAF-------------L-PRT-KILAS-TDY 100 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhc-------------C-CCC-EEEeC-CCH
Confidence 58999996 8999999999998883 7999999999888888888764210 1 111 12111 122
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++ +..-|++|..||... .+ ..+. ...+..| ..+.+.+.+.+.+....+.++++|
T Consensus 101 ~~-----------~~daDiVVitAG~~~--k~--g~tR---~dll~~N----~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 101 AV-----------TAGSDLCIVTAGARQ--IP--GESR---LNLLQRN----VALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred HH-----------hCCCCEEEECCCCCC--Cc--CCCH---HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence 11 236799999999854 22 2232 2334444 445666777776665577888886
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.032 Score=52.37 Aligned_cols=43 Identities=21% Similarity=0.174 Sum_probs=37.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV 53 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~ 53 (347)
..|+.++|+|++ |+|.-.++.+...|++|+..+|++++++.+.
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~ 207 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK 207 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH
Confidence 458999999999 9999888877779999999999999876543
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.053 Score=48.89 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=29.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
.++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 478999998 8999999999999996 78888764
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.027 Score=52.02 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=36.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
.+++++|+|+++++|.++++.+...|++|+.++++.++.+.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~ 184 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 46899999999999999999999999999999998776543
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.015 Score=54.35 Aligned_cols=116 Identities=13% Similarity=0.162 Sum_probs=69.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|.|+|++|.+|..+|..|+.+|. +++++++++ .+..+-+|... . .......+. .+ +
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~----------------~-~~~~i~~~~-~~-~ 59 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHI----------------P-TAASVKGFS-GE-E 59 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcC----------------C-cCceEEEec-CC-C
Confidence 378999999999999999998884 799999876 22222233221 0 001111100 00 0
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+ ..+.+...|++|..||... .+ ..+ -...+..|+. +.+...+.+.+....+.|+++|-.
T Consensus 60 ~-------~~~~~~daDivvitaG~~~--~~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNP 118 (312)
T TIGR01772 60 G-------LENALKGADVVVIPAGVPR--KP--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNP 118 (312)
T ss_pred c-------hHHHcCCCCEEEEeCCCCC--CC--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCc
Confidence 1 1223347899999999753 22 222 2345666654 667777777766567788888643
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.048 Score=46.48 Aligned_cols=32 Identities=19% Similarity=0.117 Sum_probs=28.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS 46 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~ 46 (347)
+|+|.|+ +|+|..+++.|++.|. ++++++.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3788886 6999999999999997 699999875
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.055 Score=47.68 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
.++|+|.|+ +|+|..+|+.|++.|. ++++++.+
T Consensus 28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 478899996 6999999999999997 69999887
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.23 Score=46.62 Aligned_cols=122 Identities=12% Similarity=0.078 Sum_probs=71.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++.|.|| |.+|..+|..++..| ..|+++++++++++...-++...... .+....... .+|.
T Consensus 6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~-------------~~~~~~I~~--~~d~ 69 (321)
T PTZ00082 6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVI-------------AGSNSKVIG--TNNY 69 (321)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhc-------------cCCCeEEEE--CCCH
Confidence 368999995 779999999999999 48999999998754333333221100 111111111 1222
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++ +.+-|++|+.+|.... ....+.+.+. ...+..|+ .+.+.+.+.+.+....+.++++|
T Consensus 70 ~~-----------l~~aDiVI~tag~~~~-~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~s 128 (321)
T PTZ00082 70 ED-----------IAGSDVVIVTAGLTKR-PGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVIT 128 (321)
T ss_pred HH-----------hCCCCEEEECCCCCCC-CCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEec
Confidence 21 1267999999998641 1111111111 33444453 46777777777665566777776
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.083 Score=42.83 Aligned_cols=79 Identities=18% Similarity=0.308 Sum_probs=55.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
.++++|.|++ |+|.++++.|++.|. ++.+++.+ ..|.+.+.+.+++..|
T Consensus 2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np---------- 70 (135)
T PF00899_consen 2 NKRVLIIGAG-GVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP---------- 70 (135)
T ss_dssp T-EEEEESTS-HHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST----------
T ss_pred CCEEEEECcC-HHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC----------
Confidence 3688888875 899999999999997 79988753 2244555566665432
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
..++..+..++ +.+...++++ ..|++|.+.
T Consensus 71 -----~~~v~~~~~~~-~~~~~~~~~~-------~~d~vi~~~ 100 (135)
T PF00899_consen 71 -----DVEVEAIPEKI-DEENIEELLK-------DYDIVIDCV 100 (135)
T ss_dssp -----TSEEEEEESHC-SHHHHHHHHH-------TSSEEEEES
T ss_pred -----ceeeeeeeccc-cccccccccc-------CCCEEEEec
Confidence 35677888887 3445555542 679998875
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.054 Score=51.62 Aligned_cols=79 Identities=9% Similarity=0.059 Sum_probs=54.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
.++|+|.|+ ||+|..+++.|+..|. ++++++.+. .|.+.+.+.|++.++
T Consensus 28 ~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np---------- 96 (355)
T PRK05597 28 DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP---------- 96 (355)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC----------
Confidence 478999988 6999999999999996 799988753 455666667766543
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
..++..+..+++. +...+++ .+.|++|.+.
T Consensus 97 -----~v~v~~~~~~i~~-~~~~~~~-------~~~DvVvd~~ 126 (355)
T PRK05597 97 -----DVKVTVSVRRLTW-SNALDEL-------RDADVILDGS 126 (355)
T ss_pred -----CcEEEEEEeecCH-HHHHHHH-------hCCCEEEECC
Confidence 2456666666653 2323332 2568877766
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.034 Score=51.76 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=37.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
..+.+++|.|+++++|.++++.+.+.|++|+.+.++.++.+.+
T Consensus 144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~ 186 (329)
T cd05288 144 KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL 186 (329)
T ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 3568999999999999999999999999999999988765443
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.013 Score=58.11 Aligned_cols=44 Identities=16% Similarity=0.192 Sum_probs=37.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~ 55 (347)
.+|+++|+|+ ||+|+++++.|++.|++|++++|+.++.++..++
T Consensus 331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~ 374 (477)
T PRK09310 331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR 374 (477)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 3589999996 6999999999999999999999998877655443
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.052 Score=50.97 Aligned_cols=116 Identities=14% Similarity=0.104 Sum_probs=72.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
-+|.|+||+|.+|..+|..|+..|. ++++.+.++ ++++..+.++...... ...... +
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-------------~~~~~~-i 69 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP-------------LLAGVV-A 69 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc-------------ccCCcE-E
Confidence 3689999999999999999998883 799999965 4466666666552100 000111 1
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-CcEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHI 162 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~g~I 162 (347)
.. .+ .+.+...|++|..||... .+ ..+. ...+..|. .+.+.+.+.+.+... .+.|
T Consensus 70 ~~--~~-----------~~~~~daDvVVitAG~~~--k~--g~tR---~dll~~Na----~i~~~i~~~i~~~~~~~~ii 125 (323)
T TIGR01759 70 TT--DP-----------EEAFKDVDAALLVGAFPR--KP--GMER---ADLLSKNG----KIFKEQGKALNKVAKKDVKV 125 (323)
T ss_pred ec--Ch-----------HHHhCCCCEEEEeCCCCC--CC--CCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEE
Confidence 10 11 122236799999999853 22 2232 34555554 456667777766544 6777
Q ss_pred EEEc
Q 019009 163 FNMD 166 (347)
Q Consensus 163 v~vs 166 (347)
+++|
T Consensus 126 ivvs 129 (323)
T TIGR01759 126 LVVG 129 (323)
T ss_pred EEeC
Confidence 7775
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.036 Score=51.46 Aligned_cols=116 Identities=17% Similarity=0.258 Sum_probs=71.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-C-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG-D-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G-~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+.|.|+|+ |+||.++|..|+.++ . ++++.++++++.+-...+|...... .... ..+..| .+.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~-------------~~~~-~~i~~~-~~y 64 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAP-------------LGSD-VKITGD-GDY 64 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchh-------------ccCc-eEEecC-CCh
Confidence 36789999 999999999998887 3 8999999977777666666553211 0111 122222 222
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++ +.+-|++|..||.+. +| ..+. ...++.|.. +.+.+.+.+.+....+.++.+|
T Consensus 65 ~~-----------~~~aDiVvitAG~pr--Kp--GmtR---~DLl~~Na~----I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 65 ED-----------LKGADIVVITAGVPR--KP--GMTR---LDLLEKNAK----IVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred hh-----------hcCCCEEEEeCCCCC--CC--CCCH---HHHHHhhHH----HHHHHHHHHHhhCCCeEEEEec
Confidence 11 236799999999864 32 2333 345555654 4455555555544456666664
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.063 Score=47.83 Aligned_cols=80 Identities=13% Similarity=0.185 Sum_probs=53.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
.++|+|.|+ +|+|.++|+.|++.|. ++++++.+ ..|.+.+.+.+++.++
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------- 89 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP---------- 89 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC----------
Confidence 478999985 5999999999999996 78887543 2344555556655432
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
..++..+..+++ .+.+.+++ ...|++|.+..
T Consensus 90 -----~~~i~~~~~~i~-~~~~~~~~-------~~~DvVi~~~d 120 (228)
T cd00757 90 -----DVEIEAYNERLD-AENAEELI-------AGYDLVLDCTD 120 (228)
T ss_pred -----CCEEEEecceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence 245666666663 33443333 35899998764
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.041 Score=51.35 Aligned_cols=116 Identities=12% Similarity=0.151 Sum_probs=69.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++.|+|++|.+|..+|..|+.+| .++++++.+ +++..+-+|... ........+. .+ +
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~-----------------~~~~~i~~~~-~~-~ 60 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHI-----------------NTPAKVTGYL-GP-E 60 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhC-----------------CCcceEEEec-CC-C
Confidence 57899999999999999999888 479999998 444444445431 0011111110 11 1
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+ +.+.+...|++|..||... .+ ..+. ...++.|.. +++...+.+.+....+.|+++|-.
T Consensus 61 ~-------~y~~~~daDivvitaG~~~--k~--g~tR---~dll~~N~~----i~~~i~~~i~~~~p~a~vivvtNP 119 (310)
T cd01337 61 E-------LKKALKGADVVVIPAGVPR--KP--GMTR---DDLFNINAG----IVRDLATAVAKACPKALILIISNP 119 (310)
T ss_pred c-------hHHhcCCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCc
Confidence 1 1122346899999999854 22 2222 345555543 455566666555457788888643
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.035 Score=51.51 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=37.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
...+.+++|+|+++++|.++++.+...|++|+.++++.++.+.
T Consensus 140 ~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~ 182 (324)
T cd08244 140 LTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL 182 (324)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3457899999999999999999999999999999998876543
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.035 Score=51.90 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=37.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~ 55 (347)
.+++++|.|+ |.||..+++.|...| .+|++++|++++.++..++
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~ 221 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE 221 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 4689999987 899999999999877 5799999999887665554
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.26 Score=45.97 Aligned_cols=113 Identities=18% Similarity=0.187 Sum_probs=70.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.+.|.|+ +.+|..+|..|+.+| .+|+++++++++.+..+.++....+ ......... .+.+
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~--------------~~~~~~i~~---~d~~ 63 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTP--------------FVKPVRIYA---GDYA 63 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccc--------------ccCCeEEee---CCHH
Confidence 4789998 789999999999999 5899999999887755555554210 001111111 2221
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.....|++|.++|... .+ ..+ ....+..| ..+.+.+.+.+.+....|.|++++
T Consensus 64 -----------~l~~aDiViita~~~~--~~--~~~---r~dl~~~n----~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 64 -----------DCKGADVVVITAGANQ--KP--GET---RLDLLKRN----VAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred -----------HhCCCCEEEEccCCCC--CC--CCC---HHHHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence 1236899999999753 11 122 22334444 445566666666554567777775
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.31 Score=45.48 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=74.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccC-ceeeEEecCCCCHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH-AKVAGIACDVCEPA 91 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~ 91 (347)
|.|.|+ |.+|..+|..|+.+|. ++++.+.++++++..+.+|.....- .. .++.... .|.+
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~-------------~~~~~~~i~~---~~y~ 64 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATAL-------------TYSTNTKIRA---GDYD 64 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhcc-------------CCCCCEEEEE---CCHH
Confidence 678898 8999999999999884 7999999999888888888763210 11 1222222 2222
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ +..-|++|..||... .| ..+.+ =...++.| ..+.+...|.+.+....+.++++|
T Consensus 65 ~-----------~~~aDivvitaG~~~--kp--g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvs 119 (307)
T cd05290 65 D-----------CADADIIVITAGPSI--DP--GNTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILIT 119 (307)
T ss_pred H-----------hCCCCEEEECCCCCC--CC--CCCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEec
Confidence 1 236799999999854 22 22211 12334444 456788888888775566666664
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.17 Score=48.57 Aligned_cols=121 Identities=14% Similarity=0.147 Sum_probs=76.5
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-e----EEE----EeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-R----VVV----ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~----Vil----~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 78 (347)
+|+.--+|.|+||+|.+|..+|..|+..|. . |.+ .+++.++++..+-+|...... ...
T Consensus 40 ~~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~-------------~~~ 106 (387)
T TIGR01757 40 SWKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYP-------------LLR 106 (387)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhh-------------hcC
Confidence 555556899999999999999999998883 3 444 489999998888888764311 001
Q ss_pred eeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHc-CC
Q 019009 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD-QP 157 (347)
Q Consensus 79 ~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~-~~ 157 (347)
++. +.. .+. +.+...|++|..||... .+ ..+. ...+..|. .+.+...+.+.+ .+
T Consensus 107 ~v~-i~~--~~y-----------~~~kdaDIVVitAG~pr--kp--g~tR---~dll~~N~----~I~k~i~~~I~~~a~ 161 (387)
T TIGR01757 107 EVS-IGI--DPY-----------EVFEDADWALLIGAKPR--GP--GMER---ADLLDING----QIFADQGKALNAVAS 161 (387)
T ss_pred ceE-Eec--CCH-----------HHhCCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCC
Confidence 111 111 121 12236899999999853 22 2222 33555554 456667777766 32
Q ss_pred CCcEEEEEc
Q 019009 158 KGGHIFNMD 166 (347)
Q Consensus 158 ~~g~Iv~vs 166 (347)
..+.||++|
T Consensus 162 ~~~iviVVs 170 (387)
T TIGR01757 162 KNCKVLVVG 170 (387)
T ss_pred CCeEEEEcC
Confidence 456677765
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.02 Score=48.48 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=36.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
..||+++|.|++.-+|..+|+.|.++|++|+++.|+.+.+.+
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~ 83 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE 83 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence 457999999997667999999999999999999998765543
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.04 Score=51.74 Aligned_cols=41 Identities=17% Similarity=0.054 Sum_probs=35.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~ 51 (347)
..|.+++|+|+ +++|..+++.+...|++ |+++++++++.+.
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~ 203 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL 203 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 34789999986 89999999988899998 9999998887654
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.094 Score=42.92 Aligned_cols=31 Identities=26% Similarity=0.317 Sum_probs=27.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
+++|.|+ +|+|.++++.|++.|. ++.+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4788997 7999999999999997 78888754
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.025 Score=48.47 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=38.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL 60 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~ 60 (347)
+|.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.+++..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l 46 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLL 46 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHH
Confidence 4778888 799999999999999999999999999988888777643
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.034 Score=54.67 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=34.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV 53 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~ 53 (347)
+++|.|+ +.+|+.+++.|.++|..|+++++++++.+...
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~ 40 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQ 40 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 5788887 89999999999999999999999998766543
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.016 Score=56.96 Aligned_cols=76 Identities=18% Similarity=0.114 Sum_probs=51.6
Q ss_pred CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 019009 11 CTCRWFSVVS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74 (347)
Q Consensus 11 ~~k~vlITGa----------------s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 74 (347)
.||+||||+| ||-+|+++|+.+..+|++|++++-... + .
T Consensus 255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~----------------- 309 (475)
T PRK13982 255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A----------------- 309 (475)
T ss_pred CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C-----------------
Confidence 5799999985 457899999999999999999875321 0 0
Q ss_pred ccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 75 ~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
....+..+ ++.+.+++.+. +.+.+. .|++|++|.+..
T Consensus 310 -~p~~v~~i--~V~ta~eM~~a---v~~~~~-~Di~I~aAAVaD 346 (475)
T PRK13982 310 -DPQGVKVI--HVESARQMLAA---VEAALP-ADIAIFAAAVAD 346 (475)
T ss_pred -CCCCceEE--EecCHHHHHHH---HHhhCC-CCEEEEeccccc
Confidence 11223333 34444454444 444443 699999999865
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.073 Score=51.31 Aligned_cols=86 Identities=14% Similarity=0.243 Sum_probs=61.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++||.||+ -+|.-+|++|+++| .+|+++.|+.++.+++++++. .++..
T Consensus 177 ~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~---------------------------~~~~~ 228 (414)
T COG0373 177 KDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG---------------------------AEAVA 228 (414)
T ss_pred ccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC---------------------------Ceeec
Confidence 46999999985 69999999999999 589999999999888877652 22333
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 136 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~ 136 (347)
.+++...+. ..|++|.+.|...+ -++.+.++..+.
T Consensus 229 l~el~~~l~-------~~DvVissTsa~~~-----ii~~~~ve~a~~ 263 (414)
T COG0373 229 LEELLEALA-------EADVVISSTSAPHP-----IITREMVERALK 263 (414)
T ss_pred HHHHHHhhh-------hCCEEEEecCCCcc-----ccCHHHHHHHHh
Confidence 344444433 57999988875432 345555555443
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.063 Score=51.58 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=36.7
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
....|.+++|.|+ ++||...++.+...|+ +|+++++++++++.+
T Consensus 195 ~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a 239 (381)
T PLN02740 195 NVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG 239 (381)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence 3456889999996 8999999998888998 699999988876544
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.043 Score=50.23 Aligned_cols=81 Identities=20% Similarity=0.200 Sum_probs=55.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..|.|++|++|++..|.-..+..--.|++|+.++-.+++..-+.+++-- .. -.|-..
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf-------------------D~----~idyk~ 205 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF-------------------DA----GIDYKA 205 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC-------------------ce----eeecCc
Confidence 4589999999999999866655556899999999999987666555411 11 223333
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+ ++.+.+++..= .+||+.+-|.|.
T Consensus 206 ~-d~~~~L~~a~P--~GIDvyfeNVGg 229 (340)
T COG2130 206 E-DFAQALKEACP--KGIDVYFENVGG 229 (340)
T ss_pred c-cHHHHHHHHCC--CCeEEEEEcCCc
Confidence 3 33333332221 369999999985
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.073 Score=50.85 Aligned_cols=43 Identities=7% Similarity=0.050 Sum_probs=35.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
...|.+++|+|+ ++||...+..+...|+ +|+.+++++++++.+
T Consensus 183 ~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a 226 (368)
T TIGR02818 183 VEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA 226 (368)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 355789999986 8999999988888998 799999998876544
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.082 Score=50.04 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=37.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...|++++|.|+ ++||...++.+...|++|+++++++++++.+
T Consensus 164 ~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 164 LKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 355789999999 9999999998889999999999998876543
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.13 Score=47.93 Aligned_cols=116 Identities=12% Similarity=0.142 Sum_probs=68.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++.|.|+ |-+|..+|..++..|. +|+++++++++++....++...... ...... +.. -+|.+
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~-------------~~~~~~-i~~-~~d~~ 66 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPV-------------EGFDTK-ITG-TNDYE 66 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhh-------------cCCCcE-EEe-CCCHH
Confidence 67899999 8889999999999875 9999999988776554444432110 000111 111 12221
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
. +...|++|.++|.+. .+ ..+. .+.+.-| +.+.+.+.+.+.+....+.+|+++
T Consensus 67 ---~--------~~~aDiVii~~~~p~--~~--~~~r---~~~~~~n----~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 67 ---D--------IAGSDVVVITAGVPR--KP--GMSR---DDLLGIN----AKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred ---H--------HCCCCEEEECCCCCC--Cc--CCCH---HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence 1 126799999999754 22 2222 2222333 355566666665554456677775
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.053 Score=42.49 Aligned_cols=71 Identities=20% Similarity=0.194 Sum_probs=51.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
++|.|.+ .+|+.+++.|.+.+.+|+++.++++..++..+ . .+.++..|.++++.++
T Consensus 1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~---------------------~--~~~~i~gd~~~~~~l~ 56 (116)
T PF02254_consen 1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELRE---------------------E--GVEVIYGDATDPEVLE 56 (116)
T ss_dssp EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH---------------------T--TSEEEES-TTSHHHHH
T ss_pred eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh---------------------c--ccccccccchhhhHHh
Confidence 5777875 79999999999977899999999987554322 1 2668889999998887
Q ss_pred HHHHHHHhhcCCccEEEEcCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG 115 (347)
++- ..+.+.+|...+
T Consensus 57 ~a~------i~~a~~vv~~~~ 71 (116)
T PF02254_consen 57 RAG------IEKADAVVILTD 71 (116)
T ss_dssp HTT------GGCESEEEEESS
T ss_pred hcC------ccccCEEEEccC
Confidence 751 125777776553
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.12 Score=45.19 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
.++|+|.|+ ||+|..+|+.|++.|. +|++++++
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 478999998 5899999999999998 79999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.034 Score=49.14 Aligned_cols=43 Identities=21% Similarity=0.322 Sum_probs=37.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l 56 (347)
++.|.||++.+|.++++.|++.|++|++.+|++++.++..++.
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~ 44 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA 44 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence 4889999999999999999999999999999998876665543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.082 Score=50.46 Aligned_cols=81 Identities=11% Similarity=0.100 Sum_probs=54.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
...|.++||.|+ ++||...++.+...|+ +|+.+++++++++.+ +++ +... + .|.
T Consensus 184 ~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l--------------------Ga~~-~--i~~ 238 (368)
T cd08300 184 VEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF--------------------GATD-C--VNP 238 (368)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc--------------------CCCE-E--Ecc
Confidence 356799999985 8999999999889999 699999998876543 222 2211 1 233
Q ss_pred CCH-HHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEP-ADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~-~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+. +++.+.+.++.. +++|++|.+.|.
T Consensus 239 ~~~~~~~~~~v~~~~~--~g~d~vid~~g~ 266 (368)
T cd08300 239 KDHDKPIQQVLVEMTD--GGVDYTFECIGN 266 (368)
T ss_pred cccchHHHHHHHHHhC--CCCcEEEECCCC
Confidence 332 234444444433 379999998873
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.065 Score=42.92 Aligned_cols=76 Identities=22% Similarity=0.327 Sum_probs=53.8
Q ss_pred eEEEEcCCChHHHHHHHHHHH-CCCeEEE-EeCCh----------------------hHHHHHHHHHHHHhhhhhhhcCC
Q 019009 14 RWFSVVSTRGLGKALAREFLL-SGDRVVV-ASRSS----------------------ESVRMTVTELEENLKEGMMAAGG 69 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~-~G~~Vil-~~R~~----------------------~~l~~~~~~l~~~~~~~~~~~~~ 69 (347)
+|.|.|++|-+|+++++.+.+ .|.+++. +.|++ +.+++..++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-------------- 67 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-------------- 67 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--------------
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--------------
Confidence 589999999999999999999 6777554 46665 112221111
Q ss_pred CCcccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 70 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 70 ~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.-+..|.|.++.+...++.+.+. ++.+++-..|.
T Consensus 68 -----------~DVvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~ 101 (124)
T PF01113_consen 68 -----------ADVVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF 101 (124)
T ss_dssp ------------SEEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred -----------CCEEEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence 12567999999999999888777 78899888875
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.059 Score=50.11 Aligned_cols=42 Identities=14% Similarity=0.116 Sum_probs=36.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+++++|.|+++++|.++++.+...|++|+.+.+++++.+.+
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL 187 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 357999999999999999999999999999999988775443
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.038 Score=44.79 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=33.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
++.+++.|.+ .|.++|..|++.|++|+.++.+++..+.+
T Consensus 17 ~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a 55 (134)
T PRK04148 17 NKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKA 55 (134)
T ss_pred CCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 4679999987 78888999999999999999999865443
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.093 Score=48.94 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=26.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
+|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D 32 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD 32 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 4788886 7999999999999996 78888754
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.033 Score=51.00 Aligned_cols=44 Identities=16% Similarity=0.034 Sum_probs=37.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~ 55 (347)
.+|+++|.|+ ||-+++++..|++.|+ +|++++|+.++.+++.++
T Consensus 121 ~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~ 165 (272)
T PRK12550 121 PDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL 165 (272)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 3578999996 7999999999999997 699999999887665543
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.098 Score=47.89 Aligned_cols=43 Identities=16% Similarity=0.088 Sum_probs=37.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
...|++++|.|+++++|.++++.+...|++|+.+.+++++.+.
T Consensus 134 ~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 176 (320)
T cd05286 134 VKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL 176 (320)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 4457899999999999999999988999999999988876543
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.076 Score=48.79 Aligned_cols=42 Identities=21% Similarity=0.213 Sum_probs=36.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
..+++++|+|+++++|.+++..+...|++|+.+.++.++.+.
T Consensus 138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (323)
T cd08241 138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL 179 (323)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence 457899999999999999999999999999999998776543
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.094 Score=48.62 Aligned_cols=43 Identities=16% Similarity=0.032 Sum_probs=37.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
...|.+++|.|+++++|.++++.+...|++|+.+.++.++.+.
T Consensus 137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~ 179 (324)
T cd08292 137 VKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE 179 (324)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence 3457899999999999999999999999999999888776443
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.097 Score=48.75 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=37.0
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
+...+.+++|.|+++++|.++++.+...|++|+.+.+++++.+
T Consensus 136 ~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 136 EMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred CCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 3456789999999999999999988899999999998877654
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.19 Score=44.86 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=29.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~ 46 (347)
+++|+|.|++ |+|.++++.|++.|. ++++++.+.
T Consensus 27 ~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 27 KAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred CCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 4788999875 999999999999996 788988654
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.11 Score=48.17 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=37.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
+..|.+++|.|+++++|.++++.+...|++|+++.++.++.+.
T Consensus 136 ~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 178 (323)
T cd05282 136 LPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE 178 (323)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence 4567899999999999999999999999999999988876543
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.089 Score=50.26 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=34.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
...|.+++|+|+ ++||...+..+...|+ +|+++++++++++.
T Consensus 189 i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~ 231 (371)
T cd08281 189 VRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLAL 231 (371)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHH
Confidence 345789999985 8999999888888999 69999998887653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.12 Score=47.40 Aligned_cols=33 Identities=15% Similarity=0.056 Sum_probs=28.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
..+|+|.|++ |+|..+++.|++.|. ++.+++.+
T Consensus 27 ~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 27 NSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred cCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4788999875 999999999999996 78888865
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.18 Score=45.37 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=28.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
+++|+|.|++ |+|..+|+.|++.|. ++++++.+
T Consensus 24 ~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4788888865 999999999999995 78888765
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.13 Score=50.00 Aligned_cols=45 Identities=9% Similarity=-0.102 Sum_probs=36.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChhHHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTV 53 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~---~Vil~~R~~~~l~~~~ 53 (347)
...|.+++|.|+++++|...++.+...|+ +|+++++++++++.+.
T Consensus 173 ~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~ 220 (410)
T cd08238 173 IKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ 220 (410)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH
Confidence 45678999999999999998876666553 7999999998876543
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.12 Score=49.01 Aligned_cols=40 Identities=23% Similarity=0.162 Sum_probs=34.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVR 50 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~ 50 (347)
..|+++||+| ++++|.++++.+...|+ +|+++++++++.+
T Consensus 176 ~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~ 216 (361)
T cd08231 176 GAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE 216 (361)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 3578999997 58999999998888999 9999998877654
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.1 Score=49.49 Aligned_cols=43 Identities=12% Similarity=0.109 Sum_probs=35.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~~ 52 (347)
...|++++|.|+ +++|.+.++.+...|++ |+.+++++++++.+
T Consensus 174 ~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~ 217 (358)
T TIGR03451 174 VKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA 217 (358)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 346789999985 89999999888889985 88899988876543
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.15 Score=47.04 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=37.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
...|.+++|.|+++++|.++++.+...|++|+.+.+++++.+.
T Consensus 140 ~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 182 (320)
T cd08243 140 LQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAAL 182 (320)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 3457899999999999999999999999999999988776443
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.16 Score=47.17 Aligned_cols=44 Identities=18% Similarity=0.153 Sum_probs=37.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...+.+++|.|+++++|.++++.+...|++++++.+++++.+.+
T Consensus 138 ~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 181 (334)
T PTZ00354 138 VKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC 181 (334)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 34578999999999999999999999999988888888765443
|
|
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.13 Score=48.10 Aligned_cols=45 Identities=11% Similarity=0.077 Sum_probs=38.9
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+..+.+++|.|+++.+|.++++.+...|++|+.+.+++++.+.+
T Consensus 159 ~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~ 203 (334)
T PRK13771 159 GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV 203 (334)
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 345678999999999999999999999999999999988776544
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.11 Score=49.34 Aligned_cols=40 Identities=20% Similarity=0.091 Sum_probs=32.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC---ChhHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR---SSESVR 50 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R---~~~~l~ 50 (347)
..|++++|+|+ +++|...++.+...|++|++++| ++++++
T Consensus 171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~ 213 (355)
T cd08230 171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD 213 (355)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH
Confidence 35789999986 89999999888889999999998 444443
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.076 Score=51.63 Aligned_cols=40 Identities=18% Similarity=0.064 Sum_probs=35.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
..||+++|.|. |.||+.+|+.|...|++|+++++++.+..
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~ 249 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL 249 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence 36899999997 58999999999999999999999987653
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.2 Score=48.03 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=28.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
.++|+|.|++ |+|..+++.|+..|. ++++++.+
T Consensus 41 ~~~VliiG~G-glG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 41 NARVLVIGAG-GLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4788999875 999999999999995 89999876
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.12 Score=48.30 Aligned_cols=42 Identities=21% Similarity=0.245 Sum_probs=33.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
++++++++||++++|.+.++.+...|++|+.+++++++.+.+
T Consensus 143 ~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~ 184 (324)
T cd08291 143 GAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL 184 (324)
T ss_pred CCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 345555669999999999887778899999999988775443
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.16 Score=48.43 Aligned_cols=41 Identities=12% Similarity=0.064 Sum_probs=34.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
..|.+++|.|+ +++|...++.+...|+ +|+++++++++.+.
T Consensus 186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~ 227 (369)
T cd08301 186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQ 227 (369)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 45789999986 8999999988888998 79999999887653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.16 Score=40.35 Aligned_cols=66 Identities=20% Similarity=0.280 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHHHHHHHHHh
Q 019009 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVN 102 (347)
Q Consensus 23 GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~ 102 (347)
|||...+..+...|++|+++++++++++.+. + .+.. ...|-.+.+ +.+++.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~--------------------~Ga~---~~~~~~~~~----~~~~i~~ 52 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-E--------------------LGAD---HVIDYSDDD----FVEQIRE 52 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-H--------------------TTES---EEEETTTSS----HHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-h--------------------hccc---ccccccccc----ccccccc
Confidence 7899999999999999999999998865432 2 2212 123444443 3333333
Q ss_pred hc--CCccEEEEcCCC
Q 019009 103 EF--GSIDIWINNAGT 116 (347)
Q Consensus 103 ~~--g~iD~li~nAG~ 116 (347)
.. .++|++|.++|.
T Consensus 53 ~~~~~~~d~vid~~g~ 68 (130)
T PF00107_consen 53 LTGGRGVDVVIDCVGS 68 (130)
T ss_dssp HTTTSSEEEEEESSSS
T ss_pred ccccccceEEEEecCc
Confidence 33 369999999984
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.49 Score=43.96 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=71.0
Q ss_pred EEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 17 SVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 17 ITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
|.|+ |.+|..+|..|+..|. +++++++++++++..+.++.....- ....+.. .. .+.+
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~i-~~--~~~~--- 60 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASF-------------LPTPKKI-RS--GDYS--- 60 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcc-------------cCCCeEE-ec--CCHH---
Confidence 3454 8899999999998883 7999999999888888888764210 1111222 11 2221
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.+...|++|..||... .+ ..+. ...++.|. .+.+.+.+.+.+....+.|+++|
T Consensus 61 --------~~~daDivVitag~~r--k~--g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvs 113 (299)
T TIGR01771 61 --------DCKDADLVVITAGAPQ--KP--GETR---LELVGRNV----RIMKSIVPEVVKSGFDGIFLVAT 113 (299)
T ss_pred --------HHCCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEeC
Confidence 2236799999999854 22 2332 34455554 45566666666655677888886
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.09 Score=50.12 Aligned_cols=41 Identities=22% Similarity=0.011 Sum_probs=33.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.|++++|.|+ ++||..+++.+...|++|++++.+.++..+.
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~ 223 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA 223 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence 5789999775 8999999998888999998888776654433
|
|
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.18 Score=48.34 Aligned_cols=42 Identities=14% Similarity=0.057 Sum_probs=33.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~ 51 (347)
...|.+++|.|+ ++||...++.+...|++ |+++++++++.+.
T Consensus 191 ~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~ 233 (378)
T PLN02827 191 VSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEK 233 (378)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence 456899999986 89999999888889985 7777888776543
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.16 Score=50.36 Aligned_cols=46 Identities=26% Similarity=0.164 Sum_probs=34.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEE 58 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~ 58 (347)
+|+++|.|+ |++|.++|+.|+++|++|++++++.. ......+.+++
T Consensus 16 ~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~ 62 (480)
T PRK01438 16 GLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA 62 (480)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence 588999997 67999999999999999999986543 33333344443
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.12 Score=49.53 Aligned_cols=38 Identities=34% Similarity=0.146 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESV 49 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l 49 (347)
.|++++|.|+ +++|...++.+...|++|++++++.++.
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~ 215 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKE 215 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHh
Confidence 5789999986 8999999998888999999998876543
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.39 Score=46.42 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=30.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVV-ASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil-~~R~~~~l~~ 51 (347)
..|++++|. |.++||..++..+...|+++++ +++++++++.
T Consensus 184 ~~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~ 225 (393)
T TIGR02819 184 GPGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ 225 (393)
T ss_pred CCCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHH
Confidence 457899995 5689999999888889987554 4666666543
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.19 Score=48.12 Aligned_cols=43 Identities=9% Similarity=0.074 Sum_probs=36.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
...|.+++|.| .+++|.+++..+...|+ +|++++++.++++.+
T Consensus 188 ~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a 231 (373)
T cd08299 188 VTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA 231 (373)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 45578999996 58999999999999998 799999988776544
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.24 Score=44.32 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=26.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
+|+|.| .||+|.++++.|+..|. ++.+++.+
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D 32 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMD 32 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 367777 56999999999999996 78888875
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.13 Score=48.17 Aligned_cols=42 Identities=17% Similarity=0.029 Sum_probs=37.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
...+.+++|.|+++++|.++++.+.+.|++|+.+.+++++.+
T Consensus 163 ~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 204 (341)
T cd08297 163 LKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE 204 (341)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 345789999999999999999999999999999999987654
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.15 Score=47.81 Aligned_cols=39 Identities=13% Similarity=0.045 Sum_probs=34.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
...|++++|.|+++++|.++++.+...|++|+++.++.+
T Consensus 144 ~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (341)
T cd08290 144 LQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP 182 (341)
T ss_pred cCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence 346799999999999999999999999999999888764
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.3 Score=42.47 Aligned_cols=33 Identities=15% Similarity=0.408 Sum_probs=27.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
..+|+|.|++ |+|.++++.|+..|. ++++++.+
T Consensus 19 ~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence 3678888876 599999999999996 68888754
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.15 Score=48.06 Aligned_cols=41 Identities=10% Similarity=0.091 Sum_probs=34.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
..|++++|+|+ +++|.++++.+...|+ +|+++++++++.+.
T Consensus 171 ~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~ 212 (351)
T cd08233 171 KPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARREL 212 (351)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 45789999985 7999999999999999 78889888877643
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.18 Score=46.08 Aligned_cols=39 Identities=26% Similarity=0.155 Sum_probs=32.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVR 50 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~ 50 (347)
.|++++|.|+ ++||...++.+...|++ |+++++++++++
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~ 159 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE 159 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 5789999987 79999999988889986 888888877764
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=94.93 E-value=1 Score=41.92 Aligned_cols=34 Identities=29% Similarity=0.438 Sum_probs=26.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHH
Q 019009 25 GKALAREFLLSGDRVVVASRSSESVR-MTVTELEE 58 (347)
Q Consensus 25 G~aiA~~la~~G~~Vil~~R~~~~l~-~~~~~l~~ 58 (347)
|..+|++|++.|+.|++.+|++++.+ +..+.+.+
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~Lae 66 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVED 66 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHH
Confidence 78999999999999999999887653 33344433
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.25 Score=42.93 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=27.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
.++|+|.|+ +|+|.++++.|+..|. ++.+++.+
T Consensus 21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 478888885 4699999999999996 68888754
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.11 Score=50.93 Aligned_cols=75 Identities=19% Similarity=0.160 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.++++|.|+ +.+|+.+++.|.+.|.+|+++++++++.++..++. ..+..+..|.++.+
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~---------------------~~~~~i~gd~~~~~ 288 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL---------------------PNTLVLHGDGTDQE 288 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC---------------------CCCeEEECCCCCHH
Confidence 588999999 89999999999999999999999988765443321 23557888999987
Q ss_pred HHHHHHHHHHhhcCCccEEEEcC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nA 114 (347)
.++++- ....|.+|...
T Consensus 289 ~L~~~~------~~~a~~vi~~~ 305 (453)
T PRK09496 289 LLEEEG------IDEADAFIALT 305 (453)
T ss_pred HHHhcC------CccCCEEEECC
Confidence 765541 13567777544
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.23 Score=46.13 Aligned_cols=114 Identities=12% Similarity=0.179 Sum_probs=66.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
|.|.|+ |.+|..+|..|+.+|. +|++.++++++++...-++...... ...... +.. -+|.+
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~-------------~~~~~~-I~~-t~d~~-- 62 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPI-------------LGSDTK-VTG-TNDYE-- 62 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhh-------------cCCCeE-EEE-cCCHH--
Confidence 468998 7899999999998875 9999999987654333333321100 011111 111 01211
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.+ ..-|++|.++|.+. .+ ..+.+ ..+.-| +.+.+.+.+.|.+....+.+|++|
T Consensus 63 -~l--------~dADiVIit~g~p~--~~--~~~r~---e~~~~n----~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 63 -DI--------AGSDVVVITAGIPR--KP--GMSRD---DLLGTN----AKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred -Hh--------CCCCEEEEecCCCC--Cc--CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence 11 26799999999753 21 22222 222333 456677777776654566677775
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.21 Score=48.23 Aligned_cols=43 Identities=16% Similarity=0.040 Sum_probs=36.6
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
.+..+.+++|+|+++++|.++++.+...|++|+++.++.++.+
T Consensus 186 ~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~ 228 (398)
T TIGR01751 186 TVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE 228 (398)
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 3456789999999999999999888889999888888776554
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.24 Score=47.60 Aligned_cols=44 Identities=16% Similarity=0.044 Sum_probs=37.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...+.+++|+|+++++|.+++..+...|++++++.+++++.+.+
T Consensus 191 ~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~ 234 (393)
T cd08246 191 VKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC 234 (393)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 34578999999999999999988888999998898888776543
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.22 Score=47.50 Aligned_cols=42 Identities=7% Similarity=0.021 Sum_probs=34.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
..|.+++|.|+ +++|.+.++.+...|+ +|+.+++++++.+.+
T Consensus 183 ~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~ 225 (365)
T cd08277 183 EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA 225 (365)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 45789999975 8999999998888998 799999988776543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.11 Score=47.93 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=41.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL 60 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~ 60 (347)
++|.|.|+ |-+|..+|..|+..|++|++.+++++.++...+.+.+..
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~ 52 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSL 52 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHH
Confidence 57888887 689999999999999999999999999988887776654
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.079 Score=42.63 Aligned_cols=95 Identities=16% Similarity=0.139 Sum_probs=53.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
-++-|.|+ |-+|.++++.|.+.|++|..+ +|+.+..+++.+.+...... +... .-.....+-+-+.| +
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~--------~~~~-~~~~aDlv~iavpD-d 79 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAIL--------DLEE-ILRDADLVFIAVPD-D 79 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-------------TTG-GGCC-SEEEE-S-C-C
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccc--------cccc-ccccCCEEEEEech-H
Confidence 46888998 579999999999999998776 67776666555544221100 0000 01123334444555 4
Q ss_pred HHHHHHHHHHhh--cCCccEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNE--FGSIDIWINNAGTNK 118 (347)
Q Consensus 92 ~v~~~~~~i~~~--~g~iD~li~nAG~~~ 118 (347)
.+..+++++... +.+=.++||+.|-..
T Consensus 80 aI~~va~~La~~~~~~~g~iVvHtSGa~~ 108 (127)
T PF10727_consen 80 AIAEVAEQLAQYGAWRPGQIVVHTSGALG 108 (127)
T ss_dssp HHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred HHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence 888888888765 323359999999753
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.03 Score=43.27 Aligned_cols=35 Identities=26% Similarity=0.162 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.||++||.|+ |.+|..=++.|++.|++|++++.+.
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 4799999998 7899999999999999999999986
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.4 Score=45.24 Aligned_cols=37 Identities=11% Similarity=0.047 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES 48 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~ 48 (347)
.|+++.|.|. |.||+++|+.|...|++|++.+|+++.
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 145 KNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 5789999986 569999999999999999999998764
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.25 Score=51.33 Aligned_cols=32 Identities=22% Similarity=0.159 Sum_probs=28.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~ 45 (347)
.++|+|.|+ |+|..+|..|++.|. ++++++.+
T Consensus 107 ~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D 140 (722)
T PRK07877 107 RLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFD 140 (722)
T ss_pred cCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCC
Confidence 488999999 499999999999994 89998864
|
|
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.19 Score=47.25 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS 45 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~ 45 (347)
.|.+++|+|+++++|.++++.+...|++|+.+.++
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~ 196 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST 196 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence 37899999999999999999998999999888765
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.084 Score=51.79 Aligned_cols=39 Identities=28% Similarity=0.300 Sum_probs=34.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
++.|.||+|+||.++|+.|.+.|++|++.+|+++..++.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~ 40 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV 40 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence 589999999999999999999999999999998765433
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.21 Score=49.10 Aligned_cols=35 Identities=11% Similarity=0.085 Sum_probs=31.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
+|+++|+|.+ |+|.++|+.|+++|++|++.+.++.
T Consensus 5 ~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 5 NKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899999986 9999999999999999999987654
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.11 Score=42.61 Aligned_cols=41 Identities=12% Similarity=0.031 Sum_probs=36.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
.||+++|.|.|.-+|+.++..|.++|++|.++.++...+++
T Consensus 27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 47999999999999999999999999999999876654444
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.22 Score=48.91 Aligned_cols=39 Identities=18% Similarity=0.095 Sum_probs=35.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESV 49 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l 49 (347)
..||+++|.|.+ .||+.+|+.+...|++|+++.+++.+.
T Consensus 252 LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~ 290 (477)
T PLN02494 252 IAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA 290 (477)
T ss_pred cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence 458999999987 899999999999999999999998654
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.1 Score=45.47 Aligned_cols=42 Identities=21% Similarity=0.429 Sum_probs=32.2
Q ss_pred EEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHH
Q 019009 16 FSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELE 57 (347)
Q Consensus 16 lITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~ 57 (347)
...||++-||.++|+.|++.|++|++.+|+ +++++.+.+++.
T Consensus 4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~ 46 (211)
T COG2085 4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG 46 (211)
T ss_pred EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc
Confidence 445667899999999999999999999555 455655555553
|
|
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.34 Score=45.42 Aligned_cols=43 Identities=21% Similarity=0.056 Sum_probs=36.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...+++++|.| ++++|.+++..+...|++|+.+++++++.+.+
T Consensus 161 ~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~ 203 (333)
T cd08296 161 AKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA 203 (333)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence 45678999999 79999999998889999999999988765433
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.16 Score=38.27 Aligned_cols=40 Identities=35% Similarity=0.453 Sum_probs=33.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCC---CeEEEE-eCChhHHHHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSG---DRVVVA-SRSSESVRMTVTE 55 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G---~~Vil~-~R~~~~l~~~~~~ 55 (347)
+.|. |+|.+|.++++.|++.| .+|+++ .|++++.++..++
T Consensus 2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~ 45 (96)
T PF03807_consen 2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKE 45 (96)
T ss_dssp EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHH
T ss_pred EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHh
Confidence 3445 67899999999999999 899966 9999988776654
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.26 Score=46.51 Aligned_cols=41 Identities=12% Similarity=0.070 Sum_probs=34.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~ 51 (347)
..|++++|+|+ +++|.++++.+...|++ |+.+++++++.+.
T Consensus 159 ~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~ 200 (347)
T PRK10309 159 CEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL 200 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence 45789999975 89999999988889997 6788888877653
|
|
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.36 Score=45.32 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=33.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
...|.+++|.|+++++|.+++..+...|++|+.++++.
T Consensus 175 ~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~ 212 (350)
T cd08274 175 VGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA 212 (350)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence 34678999999999999999999999999998888654
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.28 E-value=1.5 Score=38.75 Aligned_cols=77 Identities=19% Similarity=0.137 Sum_probs=50.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+.++|-.|++.|. ++..+++.|. +|+.++.++..++.+.+.++. .+.++.++..|+.
T Consensus 35 ~~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~-----------------~~~~~~~~~~d~~ 94 (223)
T PRK14967 35 GPGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALL-----------------AGVDVDVRRGDWA 94 (223)
T ss_pred CCCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHH-----------------hCCeeEEEECchh
Confidence 345789999987655 3444555676 899999999877665554433 2234566666664
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
+. . ..+.+|++|.|..+.
T Consensus 95 ~~------~-----~~~~fD~Vi~npPy~ 112 (223)
T PRK14967 95 RA------V-----EFRPFDVVVSNPPYV 112 (223)
T ss_pred hh------c-----cCCCeeEEEECCCCC
Confidence 31 1 114789999998754
|
|
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.28 Score=45.59 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=36.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
...|.+++|.|+++.+|.++++.+...|++|+.+.+++++.+
T Consensus 138 ~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~ 179 (327)
T PRK10754 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ 179 (327)
T ss_pred CCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 446789999999999999999888899999999988877654
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.12 Score=47.54 Aligned_cols=40 Identities=10% Similarity=0.099 Sum_probs=35.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESV 49 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l 49 (347)
..||+++|+|.|.-+|+-+|..|.++|++|+++.++...+
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l 195 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM 195 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence 3579999999999999999999999999999998865544
|
|
| >KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.25 E-value=1.3 Score=37.71 Aligned_cols=110 Identities=11% Similarity=0.071 Sum_probs=72.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+.++=.|++||+=.+.......-+.....++-|++.++.+.+-.+. .+.++..+.+|+.+ .
T Consensus 45 ~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~-----------------n~~~~~~V~tdl~~--~ 105 (209)
T KOG3191|consen 45 EICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARC-----------------NRVHIDVVRTDLLS--G 105 (209)
T ss_pred eeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHh-----------------cCCccceeehhHHh--h
Confidence 5677889999987777666655556777889999998877766554 34567788888753 2
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHh
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM 153 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l 153 (347)
++. +++|+|+.|.++.. .+..+...+.++..+.=-..|.- ++..++|.+
T Consensus 106 -------l~~--~~VDvLvfNPPYVp--t~~~~i~~~~i~~a~aGG~~Gr~-v~d~ll~~v 154 (209)
T KOG3191|consen 106 -------LRN--ESVDVLVFNPPYVP--TSDEEIGDEGIASAWAGGKDGRE-VTDRLLPQV 154 (209)
T ss_pred -------hcc--CCccEEEECCCcCc--CCcccchhHHHHHHHhcCcchHH-HHHHHHhhh
Confidence 222 58999999998864 44445555666665553333432 344444443
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.12 Score=49.60 Aligned_cols=38 Identities=13% Similarity=0.092 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSES 48 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~ 48 (347)
..++|.|.||||.+|.++.+.|+++ +.+|..++++...
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa 75 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA 75 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence 3468999999999999999999999 6789888876543
|
|
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.4 Score=43.02 Aligned_cols=42 Identities=17% Similarity=0.099 Sum_probs=36.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
..|.+++|.|+++++|..+++.+...|++|+.+.++.++.+.
T Consensus 107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 148 (293)
T cd05195 107 QKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREF 148 (293)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 457899999999999999998888899999999988776543
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.26 Score=44.27 Aligned_cols=43 Identities=16% Similarity=0.094 Sum_probs=37.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
..|.+++|.|+++++|..++..+...|++|+.+++++++.+.+
T Consensus 103 ~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 145 (288)
T smart00829 103 RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL 145 (288)
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 4578999999999999999988888999999999988876543
|
Enoylreductase in Polyketide synthases. |
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=94.13 E-value=1 Score=41.67 Aligned_cols=45 Identities=11% Similarity=0.082 Sum_probs=37.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE 57 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~ 57 (347)
.|+|.|.|+ |-+|.++|+.|+..|++|++.++++++++...+.++
T Consensus 4 ~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~ 48 (295)
T PLN02545 4 IKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSIS 48 (295)
T ss_pred cCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHH
Confidence 467888887 579999999999999999999999988876655544
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.19 Score=46.55 Aligned_cols=77 Identities=25% Similarity=0.132 Sum_probs=53.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC-
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC- 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls- 88 (347)
..|+.+.|+|+.+ ||.--++..-+.|++|+++++...+-+++.+.| +.... +|.+
T Consensus 180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L--------------------GAd~f---v~~~~ 235 (360)
T KOG0023|consen 180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL--------------------GADVF---VDSTE 235 (360)
T ss_pred CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc--------------------Cccee---EEecC
Confidence 3689999999987 997666655578999999999987777766654 22322 3566
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINN 113 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~n 113 (347)
|++.++++.+... +.+|.++|-
T Consensus 236 d~d~~~~~~~~~d---g~~~~v~~~ 257 (360)
T KOG0023|consen 236 DPDIMKAIMKTTD---GGIDTVSNL 257 (360)
T ss_pred CHHHHHHHHHhhc---Ccceeeeec
Confidence 7777777766431 345555543
|
|
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.15 Score=47.91 Aligned_cols=41 Identities=22% Similarity=0.080 Sum_probs=34.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
...|.+++|+|+ +++|...++.+...|++|+.+++++++++
T Consensus 163 ~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~ 203 (329)
T TIGR02822 163 LPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARR 203 (329)
T ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence 356789999997 89999888777788999999999988754
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.47 Score=43.84 Aligned_cols=31 Identities=26% Similarity=0.378 Sum_probs=25.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
+|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D 32 (291)
T cd01488 1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMD 32 (291)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence 4788885 5999999999999996 78888753
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.16 Score=46.93 Aligned_cols=45 Identities=18% Similarity=0.247 Sum_probs=39.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~ 58 (347)
++|.|.|+ +-+|..+|..|+++|++|++.+++++++++..+.+..
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~ 46 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIAS 46 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHH
Confidence 57889998 6799999999999999999999999998887665543
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.11 Score=49.06 Aligned_cols=36 Identities=8% Similarity=0.002 Sum_probs=29.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCe---EEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDR---VVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~---Vil~~R~~~ 47 (347)
+.+|+|.||||.+|.++++.|+++|+. +....|+..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 357999999999999999999998864 466665543
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.42 Score=46.02 Aligned_cols=74 Identities=18% Similarity=0.152 Sum_probs=51.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+.|+++|+|++ -+|+.+++.+.+.|++|++++.++...... +. . ..+..|..
T Consensus 9 ~~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a--------------------d--~~~~~~~~ 62 (395)
T PRK09288 9 SPSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA--------------------H--RSHVIDML 62 (395)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh--------------------h--heEECCCC
Confidence 3344699999976 589999999999999999999876531110 10 0 13567888
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINN 113 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~n 113 (347)
|.+.+.+++++ .++|.++..
T Consensus 63 d~~~l~~~~~~-----~~id~vi~~ 82 (395)
T PRK09288 63 DGDALRAVIER-----EKPDYIVPE 82 (395)
T ss_pred CHHHHHHHHHH-----hCCCEEEEe
Confidence 88777776653 268988754
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=93.91 E-value=2.5 Score=36.51 Aligned_cols=75 Identities=9% Similarity=-0.015 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++||-.|++.|. .+..|+++|++|+.++.+++.++.+.+.+... .-.++.++..|+.+.
T Consensus 30 ~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~----------------~~~~v~~~~~d~~~~ 90 (197)
T PRK11207 30 KPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAE----------------NLDNLHTAVVDLNNL 90 (197)
T ss_pred CCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc----------------CCCcceEEecChhhC
Confidence 45789999988776 45778889999999999988776655544331 112355666666432
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
. . -+.+|+++.+..
T Consensus 91 ~--------~---~~~fD~I~~~~~ 104 (197)
T PRK11207 91 T--------F---DGEYDFILSTVV 104 (197)
T ss_pred C--------c---CCCcCEEEEecc
Confidence 1 1 136899987653
|
|
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.4 Score=44.90 Aligned_cols=42 Identities=17% Similarity=0.056 Sum_probs=34.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~ 51 (347)
...|++++|+| ++++|.++++.+...|++ |+.+.+++++.+.
T Consensus 163 ~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~ 205 (343)
T cd08235 163 IKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEF 205 (343)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHH
Confidence 45678999996 689999999988889999 8888888776543
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=93.84 E-value=1.2 Score=43.65 Aligned_cols=119 Identities=10% Similarity=0.009 Sum_probs=71.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHH---CCC----eEEEEeC--ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLL---SGD----RVVVASR--SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~---~G~----~Vil~~R--~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (347)
+..-+|+||||++-||+++.-.+++ -|. .+++++. +.++++..+-+|+..... ....+
T Consensus 121 ~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~p-------------ll~~v 187 (452)
T cd05295 121 INPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFP-------------LLRGI 187 (452)
T ss_pred CCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHh-------------hcCCc
Confidence 3346799999999999999999986 242 3677788 678888888888774321 01112
Q ss_pred eEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-C
Q 019009 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-G 159 (347)
Q Consensus 81 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~ 159 (347)
... .| +. +.+...|++|..||... .+ ..+ -...++.|.. +++...+.+.+... .
T Consensus 188 ~i~-~~--~~-----------ea~~daDvvIitag~pr--k~--G~~---R~DLL~~N~~----Ifk~~g~~I~~~a~~~ 242 (452)
T cd05295 188 SVT-TD--LD-----------VAFKDAHVIVLLDDFLI--KE--GED---LEGCIRSRVA----ICQLYGPLIEKNAKED 242 (452)
T ss_pred EEE-EC--CH-----------HHhCCCCEEEECCCCCC--Cc--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCC
Confidence 211 11 11 12247899999999854 22 222 2445566643 45555566655432 1
Q ss_pred cEEEEEc
Q 019009 160 GHIFNMD 166 (347)
Q Consensus 160 g~Iv~vs 166 (347)
.+|+.+.
T Consensus 243 ~~VlVv~ 249 (452)
T cd05295 243 VKVIVAG 249 (452)
T ss_pred CeEEEEe
Confidence 3455443
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.19 Score=46.41 Aligned_cols=45 Identities=13% Similarity=0.208 Sum_probs=38.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~ 58 (347)
++|.|.|+ |-+|..+|..|+.+|++|++.+|+++.++...+.+.+
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~ 49 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATING 49 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 56888886 6899999999999999999999999988876665554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 347 | ||||
| 4dyv_A | 272 | Crystal Structure Of A Short-Chain DehydrogenaseRED | 7e-15 | ||
| 4dry_A | 281 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 1e-13 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 2e-12 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 5e-12 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 1e-11 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 4e-11 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 8e-11 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 2e-10 | ||
| 2bd0_A | 244 | Chlorobium Tepidum Sepiapterin Reductase Complexed | 2e-10 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 2e-10 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 2e-10 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 3e-10 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 5e-10 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 6e-10 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 6e-10 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 6e-10 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 7e-10 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 7e-10 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-09 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-09 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-09 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 1e-09 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 1e-09 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-09 | ||
| 1edo_A | 244 | The X-Ray Structure Of Beta-Keto Acyl Carrier Prote | 2e-09 | ||
| 3rkr_A | 262 | Crystal Structure Of A Metagenomic Short-Chain Oxid | 2e-09 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 3e-09 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 3e-09 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 3e-09 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 4e-09 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-09 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 6e-09 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 6e-09 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 8e-09 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 9e-09 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 9e-09 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 1e-08 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 1e-08 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 1e-08 | ||
| 2bgk_A | 278 | X-Ray Structure Of Apo-Secoisolariciresinol Dehydro | 2e-08 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 2e-08 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 2e-08 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 2e-08 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 3e-08 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 3e-08 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 3e-08 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 4e-08 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 4e-08 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 5e-08 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 7e-08 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 8e-08 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 1e-07 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 1e-07 | ||
| 3o38_A | 266 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 1e-07 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-07 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 2e-07 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 2e-07 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 2e-07 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 3e-07 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 3e-07 | ||
| 3un1_A | 260 | Crystal Structure Of An Oxidoreductase From Sinorhi | 3e-07 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 4e-07 | ||
| 3ctm_A | 279 | Crystal Structure Of A Carbonyl Reductase From Cand | 4e-07 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 4e-07 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 5e-07 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 7e-07 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 7e-07 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 7e-07 | ||
| 3i4f_A | 264 | Structure Of Putative 3-oxoacyl-reductase From Baci | 8e-07 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 8e-07 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 8e-07 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 8e-07 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 1e-06 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 1e-06 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 1e-06 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 1e-06 | ||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 1e-06 | ||
| 3gk3_A | 269 | Crystal Structure Of Acetoacetyl-Coa Reductase From | 2e-06 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-06 | ||
| 1xg5_A | 279 | Structure Of Human Putative Dehydrogenase Mgc4172 I | 2e-06 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 3e-06 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 3e-06 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 3e-06 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 3e-06 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 3e-06 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 4e-06 | ||
| 3a28_C | 258 | Crystal Structure Of L-2,3-Butanediol Dehydrogenase | 4e-06 | ||
| 1yde_A | 270 | Crystal Structure Of Human Retinal Short-Chain Dehy | 4e-06 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 5e-06 | ||
| 4iqg_C | 271 | Crystal Structure Of Bpro0239 Oxidoreductase From P | 5e-06 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 6e-06 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 7e-06 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 7e-06 | ||
| 1ybv_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 8e-06 | ||
| 1doh_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 8e-06 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 9e-06 | ||
| 3ksu_A | 262 | Crystal Structure Of Short-Chain Dehydrogenase From | 9e-06 | ||
| 1geg_A | 256 | Cryatal Structure Analysis Of Meso-2,3-Butanediol D | 1e-05 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-05 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-05 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 2e-05 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 2e-05 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 2e-05 | ||
| 3ezl_A | 256 | Crystal Structure Of Acetyacetyl-Coa Reductase From | 3e-05 | ||
| 2gdz_A | 267 | Crystal Structure Of 15-Hydroxyprostaglandin Dehydr | 3e-05 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 4e-05 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 5e-05 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 6e-05 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 7e-05 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 7e-05 | ||
| 1ja9_A | 274 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 7e-05 | ||
| 2nwq_A | 272 | Short Chain Dehydrogenase From Pseudomonas Aerugino | 8e-05 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 1e-04 | ||
| 4da9_A | 280 | Crystal Structure Of Putative Short-Chain Dehydroge | 1e-04 | ||
| 3l6e_A | 235 | Crystal Structure Of Putative Short Chain Dehydroge | 1e-04 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 1e-04 | ||
| 3gaf_A | 256 | 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De | 2e-04 | ||
| 1gz6_A | 319 | (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat | 2e-04 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 2e-04 | ||
| 3m1a_A | 281 | The Crystal Structure Of A Short-Chain Dehydrogenas | 3e-04 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 4e-04 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 5e-04 | ||
| 3tzq_B | 271 | Crystal Structure Of A Short-Chain Type Dehydrogena | 6e-04 | ||
| 2fwm_X | 250 | Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih | 6e-04 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 7e-04 | ||
| 3oml_A | 613 | Structure Of Full-Length Peroxisomal Multifunctiona | 8e-04 | ||
| 1mg5_A | 255 | Crystal Structure Of Drosophila Melanogaster Alcoho | 8e-04 |
| >pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272 | Back alignment and structure |
|
| >pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244 | Back alignment and structure |
|
| >pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258 | Back alignment and structure |
|
| >pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262 | Back alignment and structure |
|
| >pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256 | Back alignment and structure |
|
| >pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274 | Back alignment and structure |
|
| >pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain DehydrogenaseREDUCTASE Family Oxidoreductase From Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966 Length = 235 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256 | Back alignment and structure |
|
| >pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271 | Back alignment and structure |
|
| >pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613 | Back alignment and structure |
|
| >pdb|1MG5|A Chain A, Crystal Structure Of Drosophila Melanogaster Alcohol Dehydrogenase Complexed With Nadh And Acetate At 1.6 A Length = 255 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 4e-42
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
GLG+AL + G +V + R + ++ L G V
Sbjct: 12 GSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----------GN---------AV 51
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
GI D+ DV AV G ++ ++ AGT + F P+ +T E+I +++ +NLV
Sbjct: 52 IGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLV 110
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+IL ++ +R++ ++ GG + N+ + + ++Y ++K G+R SL E K
Sbjct: 111 STILVAQQTVRLIGER--GGVLANV-LSSAAQVGKANESLYCASKWGMRGFLESLRAELK 167
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246
S + + P + ++ + + PE A ++
Sbjct: 168 DSPLRLVNLYPSGIRSEFWDNTDHVDPSGFMT-----PEDAAAYML 208
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-38
Identities = 49/227 (21%), Positives = 81/227 (35%), Gaps = 25/227 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G +A++F G V R+ E + V E+E AAGG ++
Sbjct: 17 DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIE--------AAGG---------RIV 59
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ D +V N A + +++ I N G N P+L+ T+ ++
Sbjct: 60 ARSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWA 117
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ RE+ R+M G IF GA + A + S K GLR + S+ +E
Sbjct: 118 GFVSGRESARLMLAH-GQGKIFFT-GATASLRGGSGFAAFASAKFGLRAVAQSMARELMP 175
Query: 202 SKVGV-HTASPGMVLTDLLLSGSTIQNKQMFNIICE---LPETVART 244
+ V H V T + + + P VA
Sbjct: 176 KNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGA 222
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 3e-38
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G+ +A+ G VV+ R + + E+ G
Sbjct: 41 GGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIG--------GRTG--------NI 84
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V + CDV +P V L EF +D+ +NNAG+N PL + T E+ IV+ NL
Sbjct: 85 VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANL 144
Query: 140 VGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G+ LCT+ A R+M+ Q P+GG I N G+ S + P +A Y +TK + L S +
Sbjct: 145 TGAFLCTQHAFRMMKAQTPRGGRIINN-GSISAQTPRPNSAPYTATKHAITGLTKSTALD 203
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
+ + G TD+
Sbjct: 204 GRMHDIACGQIDIGNAATDMT 224
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 4e-38
Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 28/229 (12%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
++G+G +A G RVV+ +RS +++ E+ + K +
Sbjct: 16 SQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHV--------------QEP 61
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ D+ + ++G++DI +N A L + +I+ N++
Sbjct: 62 IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAM--FMDGSLSEPVDNFRKIMEINVI 119
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ +M+ Q K G+IFN+ S +YGSTK L L SL++E
Sbjct: 120 AQYGILKTVTEIMKVQ-KNGYIFNV---ASRAAKYGFADGGIYGSTKFALLGLAESLYRE 175
Query: 199 SKRSKVGVHTASPGMVLTDLL-LSGSTIQNKQMFNIICELPETVARTLV 246
+ V T PG V TD+ +G+ ++++M P+ + T+
Sbjct: 176 LAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQ-----PDDLLNTIR 219
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 8e-38
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+G+A+A +G V +A R ++++ T E+
Sbjct: 37 GSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI--------------------GDDA 76
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ DV +P V+ L V +FG +D+ NNAGT P+ T + +Q+V TNL
Sbjct: 77 LCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLT 136
Query: 141 GSILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G LCT+EA RVM+ Q P+GG I N G+ S S P +A Y +TK + L S +
Sbjct: 137 GPFLCTQEAFRVMKAQEPRGGRIINN-GSISATSPRPYSAPYTATKHAITGLTKSTSLDG 195
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ + G T +
Sbjct: 196 RVHDIACGQIDIGNADTPMA 215
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-37
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST G+G A+AR G VVV+SR E+V TV L+ G
Sbjct: 22 STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ--------GEGL---------S 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V G C V + D ++L AVN G +DI ++NA N F ++ T E ++I+ N+
Sbjct: 65 VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 124
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
++L T+ + M + GG + + P Y +K L L +L E
Sbjct: 125 KATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHPF--PNLGPYNVSKTALLGLTKNLAVE 181
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ V+ +PG++ T+
Sbjct: 182 LAPRNIRVNCLAPGLIKTNF 201
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-36
Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 16/200 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+GK +A + +G V++ R+ + + V ELE G
Sbjct: 19 GGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANG--------------GA 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D+ + + + G + ++ AG ++ P+ Q +E + V N+
Sbjct: 65 IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNV 124
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G++ + A R M GG + + + ++ YG TK + L E
Sbjct: 125 NGTMYVLKHAAREMVRG-GGGSFVGI-SSIAASNTHRWFGAYGVTKSAVDHLMQLAADEL 182
Query: 200 KRSKVGVHTASPGMVLTDLL 219
S V V++ PG++ TDL+
Sbjct: 183 GASWVRVNSIRPGLIRTDLV 202
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 1e-36
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G A+AR+ G RVV+ +R E +R E+ AAGG +
Sbjct: 38 SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV--------AAGG---------EA 80
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
ACD+ + + + G D+ +NNAG PL E + +++ NL
Sbjct: 81 ESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLK 140
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
L R M K GHI N+ AG A Y ++K GL L S +E
Sbjct: 141 APYLLLRAFAPAMIAA-KRGHIINISSLAGKNPV--ADGAAYTASKWGLNGLMTSAAEEL 197
Query: 200 KRSKVGVHTASPGMVLTDL 218
++ +V V +PG V T+
Sbjct: 198 RQHQVRVSLVAPGSVRTEF 216
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 7e-36
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 16/198 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+GKA+ +E L G VV+ASR E ++ EL+ NL +
Sbjct: 26 GATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP---TKQA---------R 73
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V I C++ +V L ++ FG I+ +NN G P +++ ++ TNL
Sbjct: 74 VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL-SPAEHISSKGWHAVLETNL 132
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ + + GG I N+ G PL G+ + G+ L SL E
Sbjct: 133 TGTFYMCKAVYSSWMKE-HGGSIVNIIVPTKAGF--PLAVHSGAARAGVYNLTKSLALEW 189
Query: 200 KRSKVGVHTASPGMVLTD 217
S + ++ +PG++ +
Sbjct: 190 ACSGIRINCVAPGVIYSQ 207
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 2e-35
Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 20/198 (10%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
LG LAR G +V+A+R+ E + ++ G +
Sbjct: 21 PALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT--------DTGR---------RAL 63
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ D+ + A V L + + +G +D+ INNA KP T E + + + G
Sbjct: 64 SVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFG 123
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
++ + + G + N+ + S Y K L + +L E
Sbjct: 124 ALRLIQGFTPALE--ESKGAVVNV-NSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGE 180
Query: 202 SKVGVHTASPGMVLTDLL 219
+ V++ PG + L
Sbjct: 181 KGIRVNSVLPGYIWGGTL 198
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 4e-35
Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 22/197 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G+A A ++ G V +A E R E+ G
Sbjct: 18 RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----------GP---------AAY 57
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV + V G +DI +NNA P+++ T E E++ + N+ G
Sbjct: 58 AVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAG 116
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
++ + A R M Q +GG I NM + +G L A+Y +TK + L S + +
Sbjct: 117 TLFTLQAAARQMIAQGRGGKIINM-ASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIK 175
Query: 202 SKVGVHTASPGMVLTDL 218
++ V+ +PG+V +
Sbjct: 176 HRINVNAIAPGVVDGEH 192
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 8e-35
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 19/197 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+GKA+A + G V +A + + + +E+ AGG
Sbjct: 12 QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN--------QAGG---------HAV 54
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV + V A G D+ +NNAG P+ T E ++++ + N+ G
Sbjct: 55 AVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKG 113
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
I + A+ + + GG I N + +G P AVY S+K +R L + ++
Sbjct: 114 VIWGIQAAVEAFKKEGHGGKIINA-CSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172
Query: 202 SKVGVHTASPGMVLTDL 218
+ V+ PG+V T +
Sbjct: 173 LGITVNGYCPGIVKTPM 189
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 9e-35
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 19/228 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G A+A F G +V+ +R + + L+E G +
Sbjct: 15 SSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE--------KFG--------VR 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V +A DV P V + + FG DI +NNAGT + +++ +E+ + +
Sbjct: 59 VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSN-ETIMEAADEKWQFYWELLV 117
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ ++ R + MR + GG I + + +Y TK L +L E
Sbjct: 118 MAAVRLARGLVPGMRAR-GGGAIIHN-ASICAVQPLWYEPIYNVTKAALMMFSKTLATEV 175
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247
+ + V+ +PG++LT + + K ++VA P
Sbjct: 176 IKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP 223
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-34
Identities = 38/197 (19%), Positives = 74/197 (37%), Gaps = 23/197 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+GK++ VV + E LK+ G +
Sbjct: 12 RGIGKSIVDVLFSLDKDTVVYGVARS---------EAPLKKLKEKYGD---------RFF 53
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ D+ E + +++L N AV G ID + NAG + + + + +++ N
Sbjct: 54 YVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFS 113
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ A+ ++ G++ + + + YGS+K L +L E +
Sbjct: 114 IVSLVGIALPELKKT--NGNVVFV-SSDACNMYFSSWGAYGSSKAALNHFAMTLANEER- 169
Query: 202 SKVGVHTASPGMVLTDL 218
+V +PG+V TD+
Sbjct: 170 -QVKAIAVAPGIVDTDM 185
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-34
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 34/234 (14%)
Query: 21 TRGLGKALAREF-------LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 73
+G+G+A+A EF +V++SR++ + E A G
Sbjct: 11 GKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR--------AEGA---- 58
Query: 74 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 133
I D+ + ADV++L+ V +G ID +NNAG + F L T E+ +
Sbjct: 59 -----LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDY 112
Query: 134 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQ 192
++TNL G+ T+ +M Q GHIF + A + +++Y +K G R L
Sbjct: 113 TMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAF--RHSSIYCMSKFGQRGLV 169
Query: 193 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246
++ +++ V + PG V T + + ++ ++ +PE +A +V
Sbjct: 170 ETMRLYARKCNVRITDVQPGAVYTPMW---GKVDDEMQALMM--MPEDIAAPVV 218
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 1e-34
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+T+G+G +AR F +G R+V++ R + L E G
Sbjct: 28 ATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE-------QFGT---------D 71
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V +A D+ EP +L+ A FG +D+ +NNAG + +P++ + + ++ NL
Sbjct: 72 VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNL 130
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
L + M +GG I + + + + P Y ++K GL L +E
Sbjct: 131 RAPALLASAVGKAMVAAGEGGAIITV-ASAAALAPLPDHYAYCTSKAGLVMATKVLAREL 189
Query: 200 KRSKVGVHTASPGMVLTDL 218
+ ++ P +VLT++
Sbjct: 190 GPHGIRANSVCPTVVLTEM 208
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-34
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++G+G A+ E G RV SR+ + + + G
Sbjct: 29 GSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR--------EKGL---------N 71
Query: 80 VAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
V G CD+ + KL + F G ++I +NNAG K FT ++ I+ TN
Sbjct: 72 VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTN 130
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ ++ A +++ + G++ + + +G S+ P ++Y ++K + Q+ SL E
Sbjct: 131 FEAAYHLSQIAYPLLKAS-QNGNVIFL-SSIAGFSALPSVSLYSASKGAINQMTKSLACE 188
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ + V++ +PG++LT L
Sbjct: 189 WAKDNIRVNSVAPGVILTPL 208
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-34
Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 22/230 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G A A G + + + E++ + G +
Sbjct: 17 GNIGLATALRLAEEGTAIALLDMNREALEKAEASVR--------EKGV---------EAR 59
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
CDV V + V +FG ID NNAG F P+ + +++ ++++ N+ G
Sbjct: 60 SYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTG 119
Query: 142 SILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ + R M Q G I N AG G P A YG++K + L + +
Sbjct: 120 AFHVLKAVSRQMITQ-NYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALTETAALDLA 176
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPETVARTLVPRI 249
+ V+ SPG + + ++ + P+ VA+ ++ +
Sbjct: 177 PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 226
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 3e-34
Identities = 42/200 (21%), Positives = 69/200 (34%), Gaps = 19/200 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G A +G RV++A V +L G
Sbjct: 21 GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR--------MEGH---------D 63
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V+ + DV VQ + G +DI + AG T+ + + V NL
Sbjct: 64 VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINL 123
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G + R+M +Q K G I + +G + A Y ++K G+ Q SL E
Sbjct: 124 NGMFRSCQAVGRIMLEQ-KQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAE 182
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ + +P + T L
Sbjct: 183 WAPHGIRANAVAPTYIETTL 202
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 3e-34
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+GK +A F G RVV+ R+ E + E+E G +
Sbjct: 14 GSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIE--------QFPG---------Q 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + DV D+QK+ +FG IDI INNA N P + +++ L
Sbjct: 57 ILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNF-ICPAEDLSVNGWNSVINIVL 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G+ C++ + ++ G+I NM A + P + K G+ + +L E
Sbjct: 116 NGTFYCSQAIGKYWIEKGIKGNIINM-VATYAWDAGPGVIHSAAAKAGVLAMTKTLAVE 173
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 4e-34
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RG+G + E G V SR+ + + +T+ + G K
Sbjct: 17 GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR--------SKGF---------K 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
V CD+ ++ Q+L N N F G ++I +NNAG +K +T E+ I+S N
Sbjct: 60 VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSIN 118
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLF 196
+ + A ++ + G++ + S G + P AVYG+TK + QL L
Sbjct: 119 FEAAYHLSVLAHPFLKAS-ERGNVVFI---SSVSGALAVPYEAVYGATKGAMDQLTRCLA 174
Query: 197 KESKRSKVGVHTASPGMVLTDL 218
E + + V+ PG++ T L
Sbjct: 175 FEWAKDNIRVNGVGPGVIATSL 196
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 4e-34
Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 25/215 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVV---ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 76
+ LG A+ F L +V+ ++ S++ ELE G
Sbjct: 19 GIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE--------DQGA------- 63
Query: 77 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 136
KVA D+ +V KL +FA EFG +DI IN G KP+++ + E + + +
Sbjct: 64 --KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDT 120
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
N + ++A + M GHI + + T + Y K + +
Sbjct: 121 INNKVAYFFIKQAAKHMNP---NGHIITI-ATSLLAAYTGFYSTYAGNKAPVEHYTRAAS 176
Query: 197 KESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231
KE + ++ V+ +PG + T T ++
Sbjct: 177 KELMKQQISVNAIAPGPMDTSFFYGQETKESTAFH 211
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-33
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 24/232 (10%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G A+AR + G +VV +R+ +EE L +AG +
Sbjct: 43 GIGAAVARALVQQGLKVVGCARTVG-------NIEE-LAAECKSAGYP-------GTLIP 87
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
CD+ D+ + + ++ +DI INNAG + LL + + + + N++
Sbjct: 88 YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMFNVNVLAL 146
Query: 143 ILCTREAMRVMRDQ-PKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+CTREA + M+++ GHI N++ +G +T Y +TK + L L +E +
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206
Query: 201 RSKVGVHTA--SPGMVLTDLLLS---GSTIQNKQMFNIICEL-PETVARTLV 246
++ + SPG+V T + + + L PE VA ++
Sbjct: 207 EAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVI 258
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-33
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
S+RG+GKA A +G +V+ +RS ++ T E+E G
Sbjct: 12 SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE--------KLGV--------- 54
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
KV + +V +PA ++++ FG +D+++NNA + +P+++ + ++ N
Sbjct: 55 KVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWTMNIN 113
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ C +EA ++M GGHI ++ + G +K L L L E
Sbjct: 114 AKALLFCAQEAAKLMEKN-GGGHIVSI-SSLGSIRYLENYTTVGVSKAALEALTRYLAVE 171
Query: 199 SKRSKVGVHTASPGMVLTDL 218
++ V+ S G + TD
Sbjct: 172 LSPKQIIVNAVSGGAIDTDA 191
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-33
Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 22/201 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G+A+AR G + + +RS + LE+ + +M G +V
Sbjct: 11 SRGIGEAIARALARDGYALALGARSVD-------RLEK-IAHELMQEQG--------VEV 54
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
DV + V++ S + FG +D+ + NAG FK L + + EE +++ NL+
Sbjct: 55 FYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLL 113
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G + + ++ G + P Y STK R L + E+
Sbjct: 114 GVWRTLKAFLDSLKRT-GGLALVTTSDV--SARLIPYGGGYVSTKWAARALVRTFQIENP 170
Query: 201 RSKVGVHTASPGMVLTDLLLS 221
+ PG V T S
Sbjct: 171 DVRFF--ELRPGAVDTYFGGS 189
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-33
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 23/200 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+GK +A + +G +V VA+R S+++++ E+ GG K
Sbjct: 42 TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA--------GVGG---------KAL 84
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
I CDV +P V+ + + E G IDI + NAG + +L EE ++I TN+ G
Sbjct: 85 PIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV-QAMLDMPLEEFQRIQDTNVTG 143
Query: 142 SILCTREAMRVMRDQPKGGHIFN---MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L + A R M DQ GG I M +G + + Y ++K + L ++ E
Sbjct: 144 VFLTAQAAARAMVDQGLGGTIITTASM--SGHIINIPQQVSHYCTSKAAVVHLTKAMAVE 201
Query: 199 SKRSKVGVHTASPGMVLTDL 218
++ V++ SPG + T+L
Sbjct: 202 LAPHQIRVNSVSPGYIRTEL 221
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 4e-33
Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 26/227 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G+ +A G VVV +RS E L++ + + G A
Sbjct: 38 KGIGREMAYHLAKMGAHVVVTARSKE-------TLQK-VVSHCLELGA--------ASAH 81
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
IA + + ++ A G +D+ I N TN L + + + N +
Sbjct: 82 YIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLS 140
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE--S 199
++ T A+ +++ G I + + +G + P+ A Y ++K L +S+ KE
Sbjct: 141 YVVLTVAALPMLKQ--SNGSIVVV-SSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSV 197
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246
R V + G++ T+ + + E A ++
Sbjct: 198 SRVNVSITLCVLGLIDTETAMKAVSGIVHMQA----APKEECALEII 240
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 4e-33
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 20/199 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
S+ GLGK++A F +VVV RS + + E++ GG
Sbjct: 15 SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK--------KVGG--------- 57
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ + DV +DV L A+ EFG +D+ INNAG + + + +++ TN
Sbjct: 58 EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTN 116
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L G+ L +REA++ + G + NM + PL Y ++K G++ + +L E
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINM-SSVHEKIPWPLFVHYAASKGGMKLMTETLALE 175
Query: 199 SKRSKVGVHTASPGMVLTD 217
+ V+ PG + T
Sbjct: 176 YAPKGIRVNNIGPGAINTP 194
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 5e-33
Identities = 62/279 (22%), Positives = 101/279 (36%), Gaps = 40/279 (14%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G A A EF G R+V++ ++ V L G
Sbjct: 41 SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLR--------GQGF---------DAH 83
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
G+ CDV ++ +L++ A G +D+ +NAG PL Q +++ ++ +L G
Sbjct: 84 GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWRWVIDIDLWG 142
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
SI + + +Q GGHI G YG K G+ L +L +E K
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFA-GLVPNAGLGTYGVAKYGVVGLAETLAREVKP 201
Query: 202 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL--------------PETVARTLVP 247
+ +GV P +V T L+ + I+ + VAR
Sbjct: 202 NGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTAD 261
Query: 248 RIRVVKGSGKAINY-LTPPRILLALVTAWLRRGRWFDDQ 285
I + Y L ++ + R R FD+Q
Sbjct: 262 AILANRL------YILPHAAARESIRRRFERIDRTFDEQ 294
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 5e-33
Identities = 44/199 (22%), Positives = 73/199 (36%), Gaps = 18/199 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
GLGK + G + V+ASR + ++ T ++ + G K
Sbjct: 34 GGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS--------SQTG--------NK 77
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V I CDV +P VQ + + G +I INNA N P + + + I L
Sbjct: 78 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVL 136
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ T E + + KG ++ + + S K G+ + SL E
Sbjct: 137 NGTAFVTLEIGKQLIKAQKGAAFLSI-TTIYAETGSGFVVPSASAKAGVEAMSKSLAAEW 195
Query: 200 KRSKVGVHTASPGMVLTDL 218
+ + + PG + T
Sbjct: 196 GKYGMRFNVIQPGPIKTKG 214
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-32
Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 21/212 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+GK +A F +G VVV+ ++++ V E++ GG +
Sbjct: 19 AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ--------QLGG---------Q 61
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
CD+ ++ L++FA+++ G +DI +NNAG + + N+
Sbjct: 62 AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNV 119
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
++ M GG I + + + + Y S+K L ++ +
Sbjct: 120 FSFFHLSQLVAPEMEKN-GGGVILTI-TSMAAENKNINMTSYASSKAAASHLVRNMAFDL 177
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231
+ V+ +PG +LTD L S T + +Q
Sbjct: 178 GEKNIRVNGIAPGAILTDALKSVITPEIEQKM 209
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-32
Identities = 36/228 (15%), Positives = 73/228 (32%), Gaps = 18/228 (7%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G A L +G V +R E +R + L + G +
Sbjct: 16 GSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR------FPGA---------R 60
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ CDV + V+ + G I +NNAG + + T+E + +
Sbjct: 61 LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKF 119
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
I R + + + I + + P + + G++ L S+ E
Sbjct: 120 FSVIHPVRAFLPQLESR-ADAAIVCV-NSLLASQPEPHMVATSAARAGVKNLVRSMAFEF 177
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247
V V+ G+V + + ++ + + +P
Sbjct: 178 APKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP 225
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-32
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVA--SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77
+G+G+ ++ + G + VA + E T+ +E AA
Sbjct: 10 GAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE--------AADQ-------- 53
Query: 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 137
K + DV + A+ + A + G D+ +NNAG + KPLL+ T E+++QI S
Sbjct: 54 -KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSV 111
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
N+ + A R + G I N A G P+ + Y +TK +R L +
Sbjct: 112 NVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF--PILSAYSTTKFAVRGLTQAAA 169
Query: 197 KESKRSKVGVHTASPGMVLTDL 218
+E V+ +PG+V T +
Sbjct: 170 QELAPKGHTVNAYAPGIVGTGM 191
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-32
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
T+G+G A+ EF G + +R+ + +++ + G +
Sbjct: 22 GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ--------KKGF---------Q 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
V G CD + +KL + FG +DI INN G + KP L +T E+ +STN
Sbjct: 65 VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTN 123
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLF 196
L + ++ A +++ G+I M S G S + ++Y +TK L QL +L
Sbjct: 124 LESAYHLSQLAHPLLKAS-GCGNIIFM---SSIAGVVSASVGSIYSATKGALNQLARNLA 179
Query: 197 KESKRSKVGVHTASPGMVLTDL 218
E + + +P ++ T L
Sbjct: 180 CEWASDGIRANAVAPAVIATPL 201
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-32
Identities = 47/197 (23%), Positives = 72/197 (36%), Gaps = 19/197 (9%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+G +A F+ G V+ASRS V +L A G +
Sbjct: 36 GSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG-------ATGR---------RC 79
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
++ DV P V + A+ EFG IDI IN A N P + + ++ +
Sbjct: 80 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTS 138
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+ +R GG I N+ A G L GS K + + L E
Sbjct: 139 GTFNVSRVLYEKFFRD-HGGVIVNI-TATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG 196
Query: 201 RSKVGVHTASPGMVLTD 217
+ V++ +PG +
Sbjct: 197 PQNIRVNSLAPGPISGT 213
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-32
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 19/203 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G+A A F G +V + R +E + T ++ AAG S +
Sbjct: 14 SSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL--------AAGVSEQN------ 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVS 136
V + DV A ++ + + +FG +DI +NNAG K + E + ++
Sbjct: 60 VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLN 119
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
NL I T++A+ + G I N+ SG +TP Y K + Q +
Sbjct: 120 LNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTA 177
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
+ + + V++ SPG+V T
Sbjct: 178 IDLIQHGIRVNSISPGLVATGFG 200
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 4e-32
Identities = 47/200 (23%), Positives = 75/200 (37%), Gaps = 24/200 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++G+G A+AR +G V +A + + V LE
Sbjct: 20 GSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE--------------------NG 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV + A V A++ G D+ NAG + +P + T+EE + N
Sbjct: 60 GFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNA 118
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G L + A R G I N A G+ PL A Y ++K + +L +E
Sbjct: 119 RGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA--PLLAHYSASKFAVFGWTQALARE 176
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ V+ PG V T +
Sbjct: 177 MAPKNIRVNCVCPGFVKTAM 196
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 4e-32
Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 19/199 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+A A G V R+ V E+ AGG +
Sbjct: 38 SGIGRATALALAADGVTVGALGRTRTEVEEVADEIV--------GAGG---------QAI 80
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV + ++ V +FG +DI + NAG N + P+ E ++ ++ NL G
Sbjct: 81 ALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRG 140
Query: 142 SILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ L + ++ + GG I + G+ +TP Y +TK + L E
Sbjct: 141 TFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELG 199
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ + V+ PG + T++
Sbjct: 200 KHHIRVNAVCPGAIETNIS 218
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 4e-32
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 21/199 (10%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+A+A++F L+ VV + + V EL G +V
Sbjct: 17 SGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR--------GMGK---------EVL 59
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
G+ DV + DV++ + ID+ NNAG G P+ + ++E E++++ NL
Sbjct: 60 GVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYS 119
Query: 142 SILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ +R + +M Q G I N AG G A Y K GL L S+
Sbjct: 120 AFYSSRAVIPIMLKQ-GKGVIVNTASIAGIRGG--FAGAPYTVAKHGLIGLTRSIAAHYG 176
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ PG V T++
Sbjct: 177 DQGIRAVAVLPGTVKTNIG 195
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 5e-32
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+ +ARE ++G ++++ +R +E + + AGG
Sbjct: 15 GIGEGIARELGVAGAKILLGARRQA-------RIEA-IATEIRDAGG---------TALA 57
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
DV + V + AV+ +G ID+ +NNAG PL +E E+++ N+ G
Sbjct: 58 QVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGV-MPLSPLAAVKVDEWERMIDVNIKGV 116
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ + +M Q + G I N+ GS S P AVY +TK +R + L +ES
Sbjct: 117 LWGIGAVLPIMEAQ-RSGQIINI---GSIGALSVVPTAAVYCATKFAVRAISDGLRQEST 172
Query: 201 RSKVGVHTASPGMVLTDLLLS---GSTIQNKQMFNIICELPETVARTLV 246
+V +PG+V ++L + T+ + I P +AR +
Sbjct: 173 NIRVT--CVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVR 219
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 8e-32
Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 40/209 (19%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G A+A +F+ G +V++ R S+ + ++
Sbjct: 16 LGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---------GTPD---------QIQ 57
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
D + KL + FG + +NNAG K + + T E ++++ NL G
Sbjct: 58 FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDG 116
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKCGLRQLQASL 195
TR ++ M+++ G I NM SS P Y ++K +R + S
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINM-------SSIEGFVGDPSLGAYNASKGAVRIMSKSA 169
Query: 196 FKESKRSKVG-----VHTASPGMVLTDLL 219
+ VH PG + T L+
Sbjct: 170 ALDCALKDYDVRVNTVH---PGYIKTPLV 195
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 8e-32
Identities = 47/232 (20%), Positives = 78/232 (33%), Gaps = 29/232 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+ A EF ++V+ + + T + + AKV
Sbjct: 41 HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-----------------GAKVH 83
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
D D+ + E G + I +NNAG L + +IE+ N++
Sbjct: 84 TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT-SDLFATQDPQIEKTFEVNVLA 142
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE--- 198
T+ + M GHI + + +G S P Y S+K +L E
Sbjct: 143 HFWTTKAFLPAMTKN-NHGHIVTV-ASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 200
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250
+ + V P V T + + ST + PE V L+ I
Sbjct: 201 LQITGVKTTCLCPNFVNTGFIKNPSTSLGPTL------EPEEVVNRLMHGIL 246
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 8e-32
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 18/200 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G AR LL G VV++ + T +L G +
Sbjct: 31 AGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA--------DLGL--------GR 74
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V + CDV V L V + G +D+ +NNAG P++ T+EE +++++ L
Sbjct: 75 VEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTL 133
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ TR A+R R GG I N + G + + Y + K G+ L E+
Sbjct: 134 TSVMRATRAALRYFRGVDHGGVIVNN-ASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEA 192
Query: 200 KRSKVGVHTASPGMVLTDLL 219
V ++ SP + L
Sbjct: 193 VEFGVRINAVSPSIARHKFL 212
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 9e-32
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 25/199 (12%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T G+G A A+ F+ G RV + R + + + E+ GG
Sbjct: 38 TSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----------GG---------GA 77
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
GI D A++ +L E G ID+ NAG PL + T E+ + N+
Sbjct: 78 VGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVK 136
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G + ++A+ ++ G + G+ +G + TP +VY ++K LR + + K
Sbjct: 137 GVLFTVQKALPLLAR---GSSVVLT-GSTAGSTGTPAFSVYAASKAALRSFARNWILDLK 192
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ ++T SPG T L
Sbjct: 193 DRGIRINTLSPGPTETTGL 211
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-31
Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 25/199 (12%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T G+G A R + G V++ R+ ++ E G +V
Sbjct: 17 THGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----------GP---------RV 56
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ D+ + ++ L A G+ID+ NAG ++ +P Q + ++ + N
Sbjct: 57 HALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTK 115
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+ + ++R+ GG I + + P +VY ++K L + L E
Sbjct: 116 GAFFTVQRLTPLIRE---GGSIVFT-SSVADEGGHPGMSVYSASKAALVSFASVLAAELL 171
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ V++ SPG + T
Sbjct: 172 PRGIRVNSVSPGFIDTPTK 190
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-31
Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 18/198 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+A A F G +VVV +R+ ++ E+ GG + A
Sbjct: 18 SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIA--------GGGG---------EAA 60
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+A DV + A + L AV FG +D NNAG + + E + + TNL
Sbjct: 61 ALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTS 120
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ L + + + GG + + A Y ++K GL L +L E
Sbjct: 121 AFLAAKYQVPAIAAL-GGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGA 179
Query: 202 SKVGVHTASPGMVLTDLL 219
+ V+ PG T
Sbjct: 180 RGIRVNALLPGGTDTPAN 197
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-31
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 31/201 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G+ + SG +VV +R++ +L KE
Sbjct: 15 AGKGIGRDTVKALHASGAKVVAVTRTNS-------DLVSLAKEC--------------PG 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + D+ + +K A+ G +D+ +NNA +P L+ T E ++ S NL
Sbjct: 54 IEPVCVDLGDWDATEK----ALGGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNL 108
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFK 197
++ R M ++ G I N+ S + P Y STK + L ++
Sbjct: 109 RSVFQVSQMVARDMINRGVPGSIVNV---SSMVAHVTFPNLITYSSTKGAMTMLTKAMAM 165
Query: 198 ESKRSKVGVHTASPGMVLTDL 218
E K+ V++ +P +VLTD+
Sbjct: 166 ELGPHKIRVNSVNPTVVLTDM 186
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-31
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 17/201 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G++ A F G +V + R+ + + T ++ AG ++K
Sbjct: 34 SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL--------KAGVPAEKINA--- 82
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
+ DV E + + N + +FG IDI +NNAG E ++ N
Sbjct: 83 ---VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN 139
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
I T++ + G I N+ +G + Y K L Q +
Sbjct: 140 FQAVIEMTQKTKEHLIKT--KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAID 197
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
+ V V++ SPG V T +
Sbjct: 198 LIQHGVRVNSVSPGAVATGFM 218
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 4e-31
Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G+ + +G RVV SR+ +L+ ++E
Sbjct: 15 AGKGIGRGTVQALHATGARVVAVSRTQA-------DLDSLVREC--------------PG 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + D+ + ++ A+ G +D+ +NNA +P L+ T E ++ NL
Sbjct: 54 IEPVCVDLGDWEATER----ALGSVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNL 108
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFK 197
I ++ R + + G I N+ S + +VY STK L L +
Sbjct: 109 RAVIQVSQIVARGLIARGVPGAIVNV---SSQCSQRAVTNHSVYCSTKGALDMLTKVMAL 165
Query: 198 ESKRSKVGVHTASPGMVLTDL 218
E K+ V+ +P +V+T +
Sbjct: 166 ELGPHKIRVNAVNPTVVMTSM 186
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 4e-31
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 21/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+A+A F +G VVV SE + AGG K
Sbjct: 20 AAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR--------QAGG---------K 62
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G+ C+V + + + A+++FG I + +NNAG + E NL
Sbjct: 63 AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGP--KPFDMPMSDFEWAFKLNL 120
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
++ A M+ GG I N+ + +G ++ A YGS+K + L ++ +
Sbjct: 121 FSLFRLSQLAAPHMQKA-GGGAILNI-SSMAGENTNVRMASYGSSKAAVNHLTRNIAFDV 178
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ V+ +PG + TD L
Sbjct: 179 GPMGIRVNAIAPGAIKTDAL 198
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-31
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 19/199 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG+A A G ++ + SSE + + + E A A+V
Sbjct: 23 SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE-------TAPD--------AEVL 67
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + A V+ FG ID + NNAG P FT E +++VS NL G
Sbjct: 68 TTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRG 127
Query: 142 SILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
L + +++MR+Q G + N G G + Y + K G+ L + E
Sbjct: 128 VFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGI--GNQSGYAAAKHGVVGLTRNSAVEYG 184
Query: 201 RSKVGVHTASPGMVLTDLL 219
R + ++ +PG + T ++
Sbjct: 185 RYGIRINAIAPGAIWTPMV 203
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-31
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RG+G A+ R G RV V + + E+ V + +GG +
Sbjct: 36 RGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT--------ESGG---------EA 78
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I DV AD+ + + +FG +D +NNAG + + + + E IE+++ N+
Sbjct: 79 VAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVT 138
Query: 141 GSILCTREAMRVMRDQ--PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
GSILC EA+R M +GG I N+ + S Y ++K + L +E
Sbjct: 139 GSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLARE 198
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGST 224
+ V+ PG++ TDL SG
Sbjct: 199 VAAEGIRVNAVRPGIIETDLHASGGL 224
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 6e-31
Identities = 44/238 (18%), Positives = 84/238 (35%), Gaps = 39/238 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G +RE + + V E+ N K
Sbjct: 13 ALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK----------------VN 56
Query: 80 VAGIACDVCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ DV P A+ +KL ++ ++DI IN AG + +IE+ ++ N
Sbjct: 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQIERTIAIN 107
Query: 139 LVGSILCTREAMRVMRDQP--KGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQAS 194
G + T + + GG I N+ S G ++ VY ++K + S
Sbjct: 108 FTGLVNTTTAILDFWDKRKGGPGGIIANI---CSVTGFNAIHQVPVYSASKAAVVSFTNS 164
Query: 195 LFKESKRSKVGVHTASPGMVLTDLL--LSGSTIQNKQMFNIICEL----PETVARTLV 246
L K + + V ++ +PG+ T L+ + ++ ++ E + V
Sbjct: 165 LAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV 222
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 9e-31
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 28/200 (14%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+RG+G+A AR G RV + +R + ++ ELE
Sbjct: 14 SRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG---------------------A 52
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ DV E D + FG + +NNAG KP+ + T EE ++ TNL
Sbjct: 53 LPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLT 111
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G+ L R A+ + + GG I N+ GS G + A Y ++K GL L + +
Sbjct: 112 GAFLGIRHAVPALLRR-GGGTIVNV---GSLAGKNPFKGGAAYNASKFGLLGLAGAAMLD 167
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ + V V PG V T
Sbjct: 168 LREANVRVVNVLPGSVDTGF 187
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-30
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 23/200 (11%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G G+A AR F +G +V+ R E ++ EL +V
Sbjct: 32 GFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK------------------TRVLP 73
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + A + + EF ++ INNAG G P ++ + +V TN+ G
Sbjct: 74 LTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGL 133
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ TR + + G I N+ GS G P + VYG TK + Q +L + +
Sbjct: 134 LYSTRLLLPRLIAHGAGASIVNL---GSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQ 190
Query: 201 RSKVGVHTASPGMVLTDLLL 220
+ V V PG+ ++ L
Sbjct: 191 GTGVRVTNLEPGLCESEFSL 210
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-30
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 20/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST G+G A+AR +G +V+ + TVT+ + G
Sbjct: 33 STSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAG------LSSG---------T 77
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V D+ +P+++ + + FG DI +NNAG + + F E+ ++I++ NL
Sbjct: 78 VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNL 136
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
S R A+ M+ + G I N+ G S P + Y + K G+ L ++ E
Sbjct: 137 SSSFHTIRGAIPPMKKK-GWGRIINIASAHGLVAS--PFKSAYVAAKHGIMGLTKTVALE 193
Query: 199 SKRSKVGVHTASPGMVLTDL 218
S V V++ PG VLT L
Sbjct: 194 VAESGVTVNSICPGYVLTPL 213
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-30
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 24/201 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G G+ +A+ F G +VV+ R E+ G
Sbjct: 19 SGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----------GD---------AAL 58
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+A D+ + ADV A+++FG +DI +NNAG + EE ++IV N+ G
Sbjct: 59 AVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRG 118
Query: 142 SILCTREAMRVMRDQPKGGH---IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L T + + ++ G I N+ + G P A Y +TK + + +L E
Sbjct: 119 VYLMTSKLIPHFKENGAKGQECVILNV-ASTGAGRPRPNLAWYNATKGWVVSVTKALAIE 177
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
+K+ V +P T LL
Sbjct: 178 LAPAKIRVVALNPVAGETPLL 198
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-30
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S RGLG A A +G RV++ + + +V L G
Sbjct: 17 SARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT--------RKGY---------D 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G+A DV + ++ + E +DI INNAG KP+++ E ++++ TNL
Sbjct: 60 AHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR-KPMVELELENWQKVIDTNL 118
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGS-----GGSSTPLTAVYGSTKCGLRQLQAS 194
+ L +R A + M + GG I N+ GS P A Y + K G++ L S
Sbjct: 119 TSAFLVSRSAAKRMIARNSGGKIINI---GSLTSQAAR---PTVAPYTAAKGGIKMLTCS 172
Query: 195 LFKESKRSKVGVHTASPGMVLTDL 218
+ E + + + PG +LTD+
Sbjct: 173 MAAEWAQFNIQTNAIGPGYILTDM 196
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-30
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
++RG+G A+A G VV+ + + + ++E AAGG
Sbjct: 35 ASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE--------AAGG--------- 77
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
K DV +PA V++L A FG +D+ +NNAG + + + +++++ N
Sbjct: 78 KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVN 136
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L G+ REA + +R GG I NM G P +Y + K G+ + L KE
Sbjct: 137 LKGTFNTLREAAQRLRV---GGRIINM-STSQVGLLHPSYGIYAAAKAGVEAMTHVLSKE 192
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231
+ + V+ +PG TDL L G + + + F
Sbjct: 193 LRGRDITVNAVAPGPTATDLFLEGKSDEVRDRF 225
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 3e-30
Identities = 49/212 (23%), Positives = 81/212 (38%), Gaps = 24/212 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
R +G+A A F G VV+ + ++E V E+E G
Sbjct: 18 RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE--------KLGR---------SA 60
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I D+ A+V+ + A ++FG I ++ AG K + + Q++ NL
Sbjct: 61 LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
L + A+ M KGG I AG G P Y ++K + L KE
Sbjct: 121 SLFLTAKTALPKMA---KGGAIVTFSSQAGRDGGG-PGALAYATSKGAVMTFTRGLAKEV 176
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231
K+ V+ PGM+ T + + + ++
Sbjct: 177 G-PKIRVNAVCPGMISTTFHDTFTKPEVRERV 207
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 3e-30
Identities = 54/203 (26%), Positives = 79/203 (38%), Gaps = 31/203 (15%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G+A A LL G +V + + E+ L E + K
Sbjct: 17 QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ---------------KTL 61
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
I CDV + ++ V+ FG +DI +NNAG N + E+ + NLV
Sbjct: 62 FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVS 112
Query: 142 SILCTREAMRVMRDQPKG--GHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL--QASLF 196
I T + M Q G G I NM AG VY ++K G+ A+L
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--AQQPVYCASKHGIVGFTRSAALA 170
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
S V ++ PG V T +L
Sbjct: 171 ANLMNSGVRLNAICPGFVNTAIL 193
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-30
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 23/198 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G A+AR G V+ A ++ T++ G A
Sbjct: 39 AGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----------GC---------GAA 78
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + + + + V FG +D + NAG L+ T E+ +++++ NL G
Sbjct: 79 ACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRG 137
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ LCT+ A M ++ GG I N+ + +G + T YG +K G+ QL E +
Sbjct: 138 AWLCTKHAAPRMIER-GGGAIVNL-SSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRS 195
Query: 202 SKVGVHTASPGMVLTDLL 219
S + +T P V T +
Sbjct: 196 SGIRSNTLLPAFVDTPMQ 213
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 3e-30
Identities = 50/200 (25%), Positives = 77/200 (38%), Gaps = 20/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST G+G +A G +V+ E ++ G+ A G K
Sbjct: 12 STSGIGLGIATALAAQGADIVLNGFGDA-------AEIEKVRAGLAAQHG--------VK 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V D+ + V+ L + AV + G IDI +NNAG + F E+ + I++ NL
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNL 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
T A+ M+ Q G I N+ A G S + Y + K G+ E
Sbjct: 116 SAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVAS--ANKSAYVAAKHGVVGFTKVTALE 172
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ + + PG V T L
Sbjct: 173 TAGQGITANAICPGWVRTPL 192
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 4e-30
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S G+G+A A G VVVA ++E+ ++ A GG
Sbjct: 17 SGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV--------ADGG---------T 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK--PLLQFTNEEIEQIVST 137
+A DV +P + +++ + EFG ID +NNA G K LL E ++ +S
Sbjct: 60 AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
NL G++ CTR + M + GG I N A S YG K G+ L L
Sbjct: 120 NLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLYS-----NYYGLAKVGINGLTQQLS 173
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
+E + ++ +PG + T+
Sbjct: 174 RELGGRNIRINAIAPGPIDTEAN 196
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 4e-30
Identities = 49/244 (20%), Positives = 88/244 (36%), Gaps = 38/244 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+ +A + +G V + R +++R+ E + + GG +
Sbjct: 13 ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ--------SLGG---------Q 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNE-FGSIDIWINNAG------TNKGFKPLLQFTNEEIE 132
+ CD + ++V+ L E G +D+ +NNA N K + +
Sbjct: 56 CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 115
Query: 133 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 191
I + L G C+ R+M G I + YG K +L
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQY---MFNVPYGVGKAACDKL 171
Query: 192 QASLFKESKRSKVGVHTASPGMVLTDLL---------LSGSTIQNKQMFNIICELPETVA 242
A E +R V + PG+V T+LL L ++ + E E
Sbjct: 172 AADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSG 231
Query: 243 RTLV 246
+ +V
Sbjct: 232 KCVV 235
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 4e-30
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 24/231 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+ RG+G+ +A E G VVV SS++ V EL+ G
Sbjct: 29 AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK--------KLGA--------- 71
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ I D+ +P++V L + AV+ FG +D ++N+G + L+ T E +++ + N
Sbjct: 72 QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLN 130
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G ++ ++ R GG I + + P A+Y +K + + +
Sbjct: 131 TRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVD 187
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249
V V+ +PG V TD+ S + + E + L
Sbjct: 188 CGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM--PQEKIDEGLANMN 236
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 4e-30
Identities = 56/307 (18%), Positives = 105/307 (34%), Gaps = 48/307 (15%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G L R+ L G +V +A +S+ + LE G +V
Sbjct: 18 NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEA-------EGSG--------PEVM 62
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
G+ DV + ++ FG + I NNAG N +P+ + + ++ + ++ NL G
Sbjct: 63 GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLF-QPIEESSYDDWDWLLGVNLHG 121
Query: 142 SILCTREAMRVMRDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
+ + M ++ KGGH+ N + +Y +TK +R L SL
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA-AFLAAGSPGIYNTTKFAVRGLSESLH 180
Query: 197 KESKRSKVGVHTASPGMVLTDLLLS-------------GSTIQNKQMFNIICEL---PET 240
+ ++GV PG+V + + S + + E P+
Sbjct: 181 YSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDV 240
Query: 241 VARTLVPRIRVVKGSGKAINY-LTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRN 299
+ RV++ + + P L + D+
Sbjct: 241 IGA------RVIEAMKANRLHIFSHPDHKEELRE---VFDEIIAEYQDYPKDPGYDQRVA 291
Query: 300 WAENRAR 306
+ + RA
Sbjct: 292 FEKFRAD 298
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 4e-30
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 22/199 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST G+GKA+A + G V++ R E+V T+ E+ A A
Sbjct: 18 STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIR--------AQYPD-------AI 62
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + D+ Q + + ++ +DI INN G + +E+ ++ N+
Sbjct: 63 LQPVVADLGTEQGCQDV----IEKYPKVDILINNLGIFEP-VEYFDIPDEDWFKLFEVNI 117
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ + TR ++ M ++ K G + + + + + A Y +TK L SL + +
Sbjct: 118 MSGVRLTRSYLKKMIER-KEGRVIFI-ASEAAIMPSQEMAHYSATKTMQLSLSRSLAELT 175
Query: 200 KRSKVGVHTASPGMVLTDL 218
+ V V+T PG LT+
Sbjct: 176 TGTNVTVNTIMPGSTLTEG 194
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 8e-30
Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 17/199 (8%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RG+G A AR + G VV+ R+ S+ +++ +AG +
Sbjct: 23 ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIK--------SAGQPQ------PLI 68
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ + ++L+ +EFG +D ++NA PL Q +E+ Q++ N+
Sbjct: 69 IALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVN 128
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE-S 199
+ + TR + +++ F G G YG +K L +L E
Sbjct: 129 ATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR--ANWGAYGVSKFATEGLMQTLADELE 186
Query: 200 KRSKVGVHTASPGMVLTDL 218
+ V ++ +PG T +
Sbjct: 187 GVTAVRANSINPGATRTGM 205
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 9e-30
Identities = 46/227 (20%), Positives = 90/227 (39%), Gaps = 23/227 (10%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+GKA+A + G +V+A+++++ + + +E + A GG K
Sbjct: 55 RGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEE-IEAVGG---------KAL 104
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + + A+ +FG IDI +NNA L + ++ +++ N G
Sbjct: 105 PCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRG 163
Query: 142 SILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ L ++ + ++ K HI N+ Y K G+ + +E K
Sbjct: 164 TYLASKACIPYLKKS-KVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK 222
Query: 201 RSKVGVHTASPG-MVLTDL--LLSGSTIQNKQMFNIICELPETVART 244
++ V+ P + T +L G I++ C + +A
Sbjct: 223 -GEIAVNALWPKTAIHTAAMDMLGGPGIES------QCRKVDIIADA 262
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-29
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G G A+A FL GDRV S+E++ T A KV
Sbjct: 12 SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH-------AYAD---------KVL 55
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG--TNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV + DV + +FG+ID+ +NNAG N L E+ +++++ N+
Sbjct: 56 RVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNV 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G L R + M Q G I N+ + + + P + Y ++K + QL S+ +
Sbjct: 116 RGIFLGCRAVLPHMLLQ-GAGVIVNI-ASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY 173
Query: 200 KRSKVGVHTASPGMVLTDLL 219
S + + PGM+ T +
Sbjct: 174 AGSGIRCNAVCPGMIETPMT 193
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-29
Identities = 46/205 (22%), Positives = 70/205 (34%), Gaps = 23/205 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G A R +G V V RS+ ++ + G K
Sbjct: 22 GNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK-------EFGV---------K 65
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
CDV V K + G I I NAG + KP + T+E+ + N+
Sbjct: 66 TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV-KPATELTHEDFAFVYDVNV 124
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLT-----AVYGSTKCGLRQLQA 193
G R ++ + + G I + + + L Y S+K L
Sbjct: 125 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184
Query: 194 SLFKESKRSKVGVHTASPGMVLTDL 218
L E + + V+ SPG V TD
Sbjct: 185 GLAAEWASAGIRVNALSPGYVNTDQ 209
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-29
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 22/200 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+RG+G A+A+ L G V + ++E + V+E+E AGG
Sbjct: 39 GSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE--------QAGG--------- 81
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ I D + +++ V G +DI +N+AG PL + T + +++++ N
Sbjct: 82 RAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH-SAPLEETTVADFDEVMAVN 140
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ R A R + D GG I + + P ++Y ++K L L L ++
Sbjct: 141 FRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARD 197
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ V+ PG TD+
Sbjct: 198 LGPRGITVNIVHPGSTDTDM 217
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-29
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 23 GLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+GKA A E+L + + ++++A+R E + +++ K
Sbjct: 44 GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNA---------------K 88
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V D+ + ++ EF IDI +NNAG G + Q E+I+ + TN+
Sbjct: 89 VHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNV 148
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFK 197
I T+ + + + + G I N+ GS G + P ++Y ++K + SL K
Sbjct: 149 TALINITQAVLPIFQAK-NSGDIVNL---GSIAGRDAYPTGSIYCASKFAVGAFTDSLRK 204
Query: 198 ESKRSKVGVHTASPGMVLTDLLL 220
E +K+ V +PG+V T+ L
Sbjct: 205 ELINTKIRVILIAPGLVETEFSL 227
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 22/227 (9%)
Query: 22 RGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RG+G A+A G +VVV + S++ V+E++ A G
Sbjct: 28 RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK--------ALGS---------DA 70
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I D+ + ++ KL + AV FG +DI ++N+G F L T EE +++ S N
Sbjct: 71 IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTR 129
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G REA R + + GG I S S P ++Y +K + K+
Sbjct: 130 GQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG 186
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247
K+ V+ +PG +TD+ S + E + +A P
Sbjct: 187 DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP 233
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 48/199 (24%), Positives = 71/199 (35%), Gaps = 19/199 (9%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+G+G AR G V + S EEN+KE G K
Sbjct: 31 PKGMGIEAARGCAEMGAAVAITYASRAQ------GAEENVKELEKTYGI---------KA 75
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
C V +KL V +FG ID +I NAG +L + E +V +L
Sbjct: 76 KAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD-SGILDGSVEAWNHVVQVDLN 134
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ C + +++ G + +G + Y K G + SL E
Sbjct: 135 GTFHCAKAVGHHFKER-GTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW 193
Query: 200 KRSKVGVHTASPGMVLTDL 218
R V++ SPG + T L
Sbjct: 194 -RDFARVNSISPGYIDTGL 211
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 28/224 (12%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T G+G + ++ L V R+ E L L E V
Sbjct: 14 TGGMGIEIVKD-LSRDHIVYALGRNPE-------HLAA-LAEI--------------EGV 50
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I D+ + + + + +D ++ A + + + E + N++
Sbjct: 51 EPIESDIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARD-TTIEAGSVAEWHAHLDLNVI 108
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+R+ + +R G + + +G+G P +Y ++K LR L + KE
Sbjct: 109 VPAELSRQLLPALRA--ASGCVIYI-NSGAGNGPHPGNTIYAASKHALRGLADAFRKEEA 165
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244
+ + V T SPG T +L Q I P+ +A
Sbjct: 166 NNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANA 209
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-29
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 29/200 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+++G+G L R + RVV SRS + +A
Sbjct: 36 ASQGIGAGLVRAYRDRNYRVVATSRSIKP-----------------SADP---------D 69
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ +A D+ +P ++ + FG ID +NNAG KP ++ T E+ + + N+
Sbjct: 70 IHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNV 128
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G T+ A M Q GHI ++ +A+ TK GL + SL E
Sbjct: 129 AGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAME 187
Query: 199 SKRSKVGVHTASPGMVLTDL 218
RS V V+ SPG++ T +
Sbjct: 188 FSRSGVRVNAVSPGVIKTPM 207
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-29
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 25/199 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G + R + G +VV E + EL
Sbjct: 17 RGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----------AD---------AAR 56
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV +PA + + AV FG + + +NNAG + + E ++I+ NL G
Sbjct: 57 YVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTG 115
Query: 142 SILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
L R ++ M++ G I N+ G G+ Y +TK +R L S E
Sbjct: 116 VFLGIRAVVKPMKEA-GRGSIINISSIEGLAGT--VACHGYTATKFAVRGLTKSTALELG 172
Query: 201 RSKVGVHTASPGMVLTDLL 219
S + V++ PG+V T +
Sbjct: 173 PSGIRVNSIHPGLVKTPMT 191
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 4e-29
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 22/200 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+ RG+G+ +A E G +V+V + S+ES V ++ G
Sbjct: 37 AGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK--------KNGS--------- 79
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
A + +V D+ ++ AV FG +DI +N+G F + T EE +++ + N
Sbjct: 80 DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTIN 138
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G REA + + GG + M + P AVY +K + + +
Sbjct: 139 TRGQFFVAREAYKHLEI---GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAID 195
Query: 199 SKRSKVGVHTASPGMVLTDL 218
K+ V+ +PG + TD+
Sbjct: 196 MADKKITVNVVAPGGIKTDM 215
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 4e-29
Identities = 54/199 (27%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A AR G V +A+R E +L L + + AAG KV
Sbjct: 18 GIGEATARALAAEGAAVAIAARRVE-------KLRA-LGDELTAAGA---------KVHV 60
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
+ DV + V V G +DI +NNAG P+ + +++ TNL+G
Sbjct: 61 LELDVADRQGVDAAVASTVEALGGLDILVNNAGI-MLLGPVEDADTTDWTRMIDTNLLGL 119
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ TR A+ + G + M S G + AVY +TK G+ +L +E
Sbjct: 120 MYMTRAALPHLLRS--KGTVVQM---SSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174
Query: 201 RSKVGVHTASPGMVLTDLL 219
V V PG T+L
Sbjct: 175 ERGVRVVVIEPGTTDTELR 193
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 4e-29
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 41/230 (17%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T GLG A AR L G ++++ R + ++ E+
Sbjct: 9 TGGLGGAFARA--LKGHDLLLSGRRAGALAELAREV----------------------GA 44
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ D+ + + + L + E G +D+ ++ G G + + + +E++++ +L+
Sbjct: 45 RALPADLADELEAKAL----LEEAGPLDLLVHAVGKA-GRASVREAGRDLVEEMLAAHLL 99
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
++ R Q KG GA P A Y + K L + KE
Sbjct: 100 T----AAFVLKHARFQ-KGARAVFF-GAYPRYVQVPGFAAYAAAKGALEAYLEAARKELL 153
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250
R V + V T L + + + PE AR ++ +
Sbjct: 154 REGVHLVLVRLPAVATGLW---APLGGPPKGAL---SPEEAARKVLEGLF 197
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 5e-29
Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 25/203 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G A+A + +G V + S + + G
Sbjct: 42 SSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQK--------TYGV---------H 84
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEIEQIVSTN 138
C++ +P V++ + +FG+ID+++ NAG P + + +I+S +
Sbjct: 85 SKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVD 144
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFN---MDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
L G C+ ++ + G + + +G + L A Y + K L SL
Sbjct: 145 LNGVYYCSHNIGKIFKKN-GKGSLIITSSI--SGKIVNIPQLQAPYNTAKAACTHLAKSL 201
Query: 196 FKESKRSKVGVHTASPGMVLTDL 218
E V+T SPG + TD+
Sbjct: 202 AIEW-APFARVNTISPGYIDTDI 223
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 5e-29
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 21/228 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G+ A F G V + RSSE + T + + +G S K+
Sbjct: 14 SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILK--------SGVSEKQ------ 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNEEIEQIVS 136
V + DV ++ N + +FG ID+ +NNAG + + + +
Sbjct: 60 VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
NL I T++ + G I N+ +G + P Y K L Q S
Sbjct: 120 LNLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTA 177
Query: 197 KESKRSKVGVHTASPGMVLTDLL--LSGSTIQNKQMFNIICELPETVA 242
+ + + V++ SPGMV T + +++ +N + E +
Sbjct: 178 IDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP 225
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 5e-29
Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RGLG AR+ + +G RVV+A E T EL G
Sbjct: 15 RGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----------GD---------AAR 54
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV D Q++ +A EFGS+D +NNAG + L + E ++V NL G
Sbjct: 55 YQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTG 113
Query: 142 SILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ + + M+D GG I N+ AG G LT+ YG++K G+R L E
Sbjct: 114 VFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGL--ALTSSYGASKWGVRGLSKLAAVELG 170
Query: 201 RSKVGVHTASPGMVLTDLL 219
++ V++ PGM T +
Sbjct: 171 TDRIRVNSVHPGMTYTPMT 189
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 6e-29
Identities = 38/198 (19%), Positives = 79/198 (39%), Gaps = 19/198 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ GLG A A E +G R+++ SR+ E + + + + +G +
Sbjct: 15 GSSGLGFASALELARNGARLLLFSRNREKLEAAASRIAS------LVSGA---------Q 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V +A D+ EP D+ +L + G DI + + G + ++ E+ ++
Sbjct: 60 VDIVAGDIREPGDIDRLFE-KARDLGGADILVYSTGGPRP-GRFMELGVEDWDESYRLLA 117
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
++ R A M ++ G + + G+ + A+ + + + +L E
Sbjct: 118 RSAVWVGRRAAEQMVEK-GWGRMVYI-GSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175
Query: 200 KRSKVGVHTASPGMVLTD 217
V V+ P ++LTD
Sbjct: 176 APHGVTVNAVLPSLILTD 193
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 7e-29
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RGLG +A+ +G VVVASR+ E +L E G +
Sbjct: 29 GSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE-------KYGV---------E 72
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
CDV +V+KL +FG +D +N AG N+ P +F +E Q++ NL
Sbjct: 73 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR-HPAEEFPLDEFRQVIEVNL 131
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ REA ++R+ I N+ + P + Y ++K G+ L +L KE
Sbjct: 132 FGTYYVCREAFSLLRES-DNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEW 190
Query: 200 KRSKVGVHTASPGMVLTDL 218
R + V+ +PG T +
Sbjct: 191 GRYGIRVNVIAPGWYRTKM 209
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 7e-29
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G + R F+ SG RVV+ + R EL
Sbjct: 19 RGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG---------------------AV 57
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
I CDV + DV+ L + + FG +D +NNAG + + + + + Q++ NL+G
Sbjct: 58 FILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLG 117
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ T+ A+ +R G++ N+ + G Y +TK + + +L +
Sbjct: 118 TYTLTKLALPYLRKS--QGNVINI-SSLVGAIGQAQAVPYVATKGAVTAMTKALALDESP 174
Query: 202 SKVGVHTASPGMVLTDLL 219
V V+ SPG + T L
Sbjct: 175 YGVRVNCISPGNIWTPLW 192
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 7e-29
Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 12/198 (6%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RG+G A+A+ G V + ++S+E + KE + AGG +
Sbjct: 17 GSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKE-IEEAGG---------Q 66
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
I D+ + V V +FG IDI +NNA + + + + + +
Sbjct: 67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQV 125
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ ++ + M+ + HI + Y K G+ + +E
Sbjct: 126 RGTYAVSQSCIPHMKGR-DNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184
Query: 200 KRSKVGVHTASPGMVLTD 217
+ + + +T P +
Sbjct: 185 RDAGIASNTLWPRTTVAT 202
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 8e-29
Identities = 29/202 (14%), Positives = 55/202 (27%), Gaps = 27/202 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G A G VV S + E + G
Sbjct: 9 ARHFAGPAAVEALTQDGYTVVCHDASFA-------DAAERQRFESENPGT---------- 51
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVST 137
++L + + +ID ++N + PL + +I Q+
Sbjct: 52 ------IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEA 105
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
+ IL + A+ +R G + + + G +YG + L S K
Sbjct: 106 LSIFPILLLQSAIAPLRAA-GGASVIFI-TSSVGKKPLAYNPLYGPARAATVALVESAAK 163
Query: 198 ESKRSKVGVHTASPGMVLTDLL 219
R + ++ P
Sbjct: 164 TLSRDGILLYAIGPNFFNNPTY 185
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 8e-29
Identities = 23/201 (11%), Positives = 52/201 (25%), Gaps = 35/201 (17%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ LG + + F +
Sbjct: 31 SGALGAEVVKFFKSKSWNTISIDFRENP-----------------------------NAD 61
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+++ + ++ +D ++ AG G + ++ ++ NL
Sbjct: 62 HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLY 121
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ +++ +GG GA + + T YG+TK + L E+
Sbjct: 122 SAFASAHIGAKLLN---QGGLFVLT-GASAALNRTSGMIAYGATKAATHHIIKDLASENG 177
Query: 201 RSKVG--VHTASPGMVLTDLL 219
G P + T
Sbjct: 178 GLPAGSTSLGILPVTLDTPTN 198
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-28
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 34/210 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
S++G+G A AR F +G +V + R + + + T+ + A GG
Sbjct: 15 SSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMR--------ADGG--------- 57
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
A A D+ Q+L + V +FG ID+ INNAG G KPL + + + ++ N
Sbjct: 58 DAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDAN 117
Query: 139 LVGSILCTREAMRVMRDQP----KGGHIFNM------DGAGSGGSSTPLTAVYGSTKCGL 188
+ ++ T+ A+ + + + + G G G +YG+ K L
Sbjct: 118 IRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA------GLYGAAKAFL 171
Query: 189 RQLQASLFKESKRSKVGVHTASPGMVLTDL 218
+ + + V + SPG V T
Sbjct: 172 HNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-28
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 26/199 (13%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G G+ + R F+ G +V+ R E ++ EL +
Sbjct: 11 GFGECITRRFIQQGHKVIATGRRQERLQELKDELG--------------------DNLYI 50
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
DV A ++++ E+ +IDI +NNAG G +P + + E+ E ++ TN G
Sbjct: 51 AQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGL 110
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ TR + M ++ GHI N+ GS G VYG+TK +RQ +L +
Sbjct: 111 VYMTRAVLPGMVER-NHGHIINI---GSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH 166
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ V V PG+V
Sbjct: 167 GTAVRVTDIEPGLVGGTEF 185
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-28
Identities = 41/196 (20%), Positives = 71/196 (36%), Gaps = 13/196 (6%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G A+A G V +A++S+ + + + AAGG +
Sbjct: 16 RGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAA-VNAAGG---------QGL 65
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ CD+ E V+ V+ FG IDI +NNA + L + + + N G
Sbjct: 66 ALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARG 124
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
S +C + + + HI + + Y K G+ + L E
Sbjct: 125 SFVCAQACLPHLLQA-PNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFG 183
Query: 201 RSKVGVHTASPGMVLT 216
V ++ P V+
Sbjct: 184 PQGVAINALWPRTVIA 199
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-28
Identities = 47/203 (23%), Positives = 74/203 (36%), Gaps = 28/203 (13%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
GLG+AL F+ G RV V +S+E +R GG
Sbjct: 14 ASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----------GG---------NA 53
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI----EQIVS 136
G+ DV D ++ + + FG ID I NAG L ++I + I
Sbjct: 54 VGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFH 113
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
N+ G I + + + G + + +G +Y +TK + L +
Sbjct: 114 VNVKGYIHAVKACLPALVSS--RGSVVFT-ISNAGFYPNGGGPLYTATKHAVVGLVRQMA 170
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
E V V+ +PG + TDL
Sbjct: 171 FELAP-HVRVNGVAPGGMNTDLR 192
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 2e-28
Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 23/199 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G +R +G RVV+A + + G
Sbjct: 21 GGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----------GR---------GAV 60
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTNLV 140
D+ V+ L +F ++ FG +DI NNA ++ + Q T + + + N
Sbjct: 61 HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G++L + A+ + GG I N+ + + ++ ++ Y TK + L + +
Sbjct: 121 GTMLMCKYAIPRLISA-GGGAIVNI-SSATAHAAYDMSTAYACTKAAIETLTRYVATQYG 178
Query: 201 RSKVGVHTASPGMVLTDLL 219
R V + +PG+V T L
Sbjct: 179 RHGVRCNAIAPGLVRTPRL 197
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-28
Identities = 42/200 (21%), Positives = 79/200 (39%), Gaps = 23/200 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G + R F SG R+++ R + ++ EL A
Sbjct: 19 AGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA-------------------AV 59
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
A I DV + + + + I +N+AG + L+ + Q+++ N+
Sbjct: 60 AARIVADVTDAEAMTAAAA-EAEAVAPVSILVNSAGIARL-HDALETDDATWRQVMAVNV 117
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
G +R R M + G I N+ +G+ + + Y ++K + QL +L E
Sbjct: 118 DGMFWASRAFGRAMVAR-GAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAE 176
Query: 199 SKRSKVGVHTASPGMVLTDL 218
V V+ +PG V T++
Sbjct: 177 WAGRGVRVNALAPGYVATEM 196
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-28
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G G+A+A + +GD V+ +R +E + +L +
Sbjct: 13 ASSGFGRAIAEAAVAAGDTVIGTARRTE----ALDDLVAAYPDR---------------- 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
I+ DV + + ++ + +G +D+ +NNAG T G + T E+ + +
Sbjct: 53 AEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVG--AFEETTERELRDLFELH 110
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ G TR + MR++ G + N+ + G S + Y +TK L QL L E
Sbjct: 111 VFGPARLTRALLPQMRER-GSGSVVNI-SSFGGQLSFAGFSAYSATKAALEQLSEGLADE 168
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 230
+ V PG T+L G+ +++
Sbjct: 169 VAPFGIKVLIVEPGAFRTNLFGKGAAYFSEEN 200
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 3e-28
Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 20/228 (8%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+ A+ F+ G +VV+A + + + + ++
Sbjct: 26 GGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP------------------DVIS 67
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTNLV 140
+ CDV + DV+ L + + + G +DI N G + +L+ NE+ ++++ N+
Sbjct: 68 FVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVY 127
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+ L + A RVM K G I S + ++ VY +TK + L SL E
Sbjct: 128 GAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELG 186
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248
+ V+ SP +V + LL + + ++ + + L
Sbjct: 187 EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE 234
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-28
Identities = 51/247 (20%), Positives = 83/247 (33%), Gaps = 41/247 (16%)
Query: 21 TRGLGKALAREF---LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77
+RG G+ALA + L G ++V++RS +R EL +
Sbjct: 15 SRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL-------------- 60
Query: 78 AKVAGIACDVCEPADVQKL----SNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEI 131
KV A D+ A VQ+L E + INNA T + L E+
Sbjct: 61 -KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV 119
Query: 132 EQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGL 188
+ NL + T + +D P + N+ S + P +Y + K
Sbjct: 120 NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNI---SSLCALQPYKGWGLYCAGKAAR 176
Query: 189 RQLQASLFKESKRSKVGVHTASPGMVLTD----LLLSGSTIQNKQMFNIICEL-----PE 239
L L E V V + +PG + D + + + +
Sbjct: 177 DMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG 234
Query: 240 TVARTLV 246
T A+ L+
Sbjct: 235 TSAQKLL 241
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 5e-28
Identities = 57/304 (18%), Positives = 99/304 (32%), Gaps = 36/304 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G G+ A +G RV + R + E +
Sbjct: 15 SGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD------------NDVDLR 62
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV V + + + E G ID+ I+NAG F P FT E+ ++ N++
Sbjct: 63 TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHM-VFGPAEAFTPEQFAELYDINVLS 121
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ R A+ MR Q K G + + + S G + P A Y + K + + +E R
Sbjct: 122 TQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSR 180
Query: 202 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINY 261
+ PG + + + + P + + KA
Sbjct: 181 WGIETSIIVPGAFTSG-------TNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAA 233
Query: 262 LTPP--------RILLALVTAW-----LRRGRWFDDQGRALYAAEADRIRNWAENRARFS 308
+ PP ++ +V R + G + + DR+R AE R
Sbjct: 234 IVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVGFSVLDRLR--AEMLHRVG 291
Query: 309 FTDA 312
+D
Sbjct: 292 LSDL 295
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 7e-28
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST G+G +A+ +G +V+ + + E+ G K
Sbjct: 12 STSGIGLGIAQVLARAGANIVLNGFGDPAP--ALAEIA--------RHGV---------K 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
D+ + A ++ L A EFG +DI +NNAG P+ QF E ++I++ NL
Sbjct: 53 AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHV-APVEQFPLESWDKIIALNL 111
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
TR A+ MR + G I N+ G GS A Y + K G+ L + E
Sbjct: 112 SAVFHGTRLALPGMRAR-NWGRIINIASVHGLVGS--TGKAAYVAAKHGVVGLTKVVGLE 168
Query: 199 SKRSKVGVHTASPGMVLTDL 218
+ S V + PG VLT L
Sbjct: 169 TATSNVTCNAICPGWVLTPL 188
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 8e-28
Identities = 42/229 (18%), Positives = 80/229 (34%), Gaps = 37/229 (16%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ GLG LA+ + G + RS + L N V
Sbjct: 10 SSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNN--------------------V 49
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
A D+ +V++L +++AG + F L + E+I+ ++ NL
Sbjct: 50 GYRARDLASHQEVEQLFEQL---DSIPSTVVHSAG-SGYFGLLQEQDPEQIQTLIENNLS 105
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+I RE ++ +DQ ++ + S + Y + K ++ L S+ E
Sbjct: 106 SAINVLRELVKRYKDQ--PVNVVMI---MSTAAQQPKAQESTYCAVKWAVKGLIESVRLE 160
Query: 199 SKRSKVGVHTASPGMVLTDLL-LSGSTIQNKQMFNIICELPETVARTLV 246
K + + PG + T+ SG ++ + E A +
Sbjct: 161 LKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMS-----AEDAALMIH 204
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 107 bits (271), Expect = 1e-27
Identities = 42/229 (18%), Positives = 81/229 (35%), Gaps = 28/229 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G+A+A F + G + +A + G +
Sbjct: 15 GANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIR--------NLGR---------R 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V + CDV +P DV+ ++ FG DI +NNAG P + T E+ ++ N+
Sbjct: 56 VLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINV 114
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
L + + M+ G I N+ + + Y STK +L +
Sbjct: 115 DSGFLMAKAFVPGMKRN-GWGRIINL-TSTTYWLKIEAYTHYISTKAANIGFTRALASDL 172
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE------LPETVA 242
+ + V+ +P +V T + + + + + +P +
Sbjct: 173 GKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLT 221
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-27
Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 23/198 (11%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+A A F +G VVVA + ++ E+ G K
Sbjct: 37 SGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----------GS---------KAF 76
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
G+ DV D + + ++G +D+ +NNAG ++ E ++I+S N+ G
Sbjct: 77 GVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFG-TTGNVVTIPEETWDRIMSVNVKG 135
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
LC++ + VMR GG I N + + S+ Y ++K + L ++ + +
Sbjct: 136 IFLCSKYVIPVMRRN-GGGSIINT-TSYTATSAIADRTAYVASKGAISSLTRAMAMDHAK 193
Query: 202 SKVGVHTASPGMVLTDLL 219
+ V+ +PG + +
Sbjct: 194 EGIRVNAVAPGTIDSPYF 211
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-27
Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 27/228 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+GKA+A G V+V+ ++E + + G K
Sbjct: 14 AAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----------GK---------K 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
IA D+ +P V+ L G IDI +NNA F + +I+ NL
Sbjct: 54 ARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNL 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ + TR MR K G + ++ + + + TP A Y + K G+ +L E
Sbjct: 113 TGTFIVTRAGTDQMRAAGKAGRVISI-ASNTFFAGTPNMAAYVAAKGGVIGFTRALATEL 171
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-----PETVA 242
+ + + +PG++ +D + + + ++ + PE +A
Sbjct: 172 GKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIA 219
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 4e-27
Identities = 45/228 (19%), Positives = 74/228 (32%), Gaps = 39/228 (17%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G A+ +G RV VA R+ + A
Sbjct: 38 GGIGGAVVTALRAAGARVAVADRAVAGI----------------------------AADL 69
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ D+ E A L G +DI +NNAG + + T+ + + N+
Sbjct: 70 HLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEA 128
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
R A+ +M GG I N+ + G P A+Y TK L L + +
Sbjct: 129 PFRICRAAIPLMAAA-GGGAIVNV-ASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAP 186
Query: 202 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249
+ ++ P V T +L + F P+ L +
Sbjct: 187 QGIRINAVCPNEVNTPML--------RTGFAKRGFDPDRAVAELGRTV 226
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-27
Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 33/199 (16%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
++G+GKA+ L + + V+ + + +
Sbjct: 13 SKGIGKAVVELLLQNKNHTVINIDIQQ------------------SFSA--------ENL 46
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
I D+ + D+ + + + S D NAG + E I++++ N+
Sbjct: 47 KFIKADLTKQQDITNV--LDIIKNVSFDGIFLNAGILI-KGSIFDIDIESIKKVLDLNVW 103
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
SI + ++ G I G+ + P + Y +K + Q+ SL +
Sbjct: 104 SSIYFIKGLENNLK---VGASIVFN-GSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLA 159
Query: 201 RSKVGVHTASPGMVLTDLL 219
+ ++ V+T PG V TDL
Sbjct: 160 KYQIRVNTVCPGTVDTDLY 178
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-27
Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 30/199 (15%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
G+G+A+AR F G +++ +R E L+ L
Sbjct: 27 GIGEAIARRFSEEGHPLLLLARRVE-------RLKA-LNLP---------------NTLC 63
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 142
DV + A +G D +NNAG + E +++ N++G
Sbjct: 64 AQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGL 122
Query: 143 ILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ + + M+ + G I N+ S G + P A Y TK + + ++ +E
Sbjct: 123 LNGMQAVLAPMKAR-NCGTIINI---SSIAGKKTFPDHAAYCGTKFAVHAISENVREEVA 178
Query: 201 RSKVGVHTASPGMVLTDLL 219
S V V T +P V T+LL
Sbjct: 179 ASNVRVMTIAPSAVKTELL 197
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 6e-27
Identities = 42/198 (21%), Positives = 74/198 (37%), Gaps = 32/198 (16%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G+A+A F+ G +V+ S G AK
Sbjct: 18 MGIGRAIAERFVDEGSKVIDLSIHDP--------------------GE--------AKYD 49
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
I CDV P V+ + E+GSI + +NNAG + + + E +I+ NL G
Sbjct: 50 HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFG 108
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
++ A+ M + I N+ + T + Y ++K + L S+ +
Sbjct: 109 YYYASKFAIPYMIRS-RDPSIVNI-SSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP 166
Query: 202 SKVGVHTASPGMVLTDLL 219
+ + P + T L+
Sbjct: 167 -LLRCNAVCPATIDTPLV 183
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 7e-27
Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 26/198 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
RG+G+A+A+ F G V + E + A A
Sbjct: 16 RGIGRAIAQAFAREGALVALCDLRPEGKEV--------------AEAI---------GGA 52
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
D+ + + + A G +D+ +NNA L E +++ NL
Sbjct: 53 FFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTA 111
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
+ + A R MR GG I N+ + G + A Y ++K GL L SL +
Sbjct: 112 PMHLSALAAREMRKV-GGGAIVNV-ASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAP 169
Query: 202 SKVGVHTASPGMVLTDLL 219
++ V+ +PG + T+ +
Sbjct: 170 LRIRVNAVAPGAIATEAV 187
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 8e-27
Identities = 31/198 (15%), Positives = 73/198 (36%), Gaps = 17/198 (8%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ G+G+ A + G V++ R+ E +R + + G +
Sbjct: 21 SDGIGREAAMTYARYGATVILLGRNEEKLRQVASHIN--------EETGRQ------PQW 66
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ C + Q+L+ + +D ++NAG P+ + + + ++ N+
Sbjct: 67 FILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVN 126
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ + T+ + ++ G +F G G Y ++K + L E +
Sbjct: 127 ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR--ANWGAYAASKFATEGMMQVLADEYQ 184
Query: 201 RSKVGVHTASPGMVLTDL 218
++ V+ +PG T +
Sbjct: 185 -QRLRVNCINPGGTRTAM 201
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 8e-27
Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 22/202 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
RG+G +AR SG + + +E V + EL G
Sbjct: 37 GRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS--------GLGA--------- 79
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVST 137
+V + D+ + + Q + V EFG ID +NNAG + L E + IV
Sbjct: 80 RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGV 139
Query: 138 NLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
NL G++ T+ ++ M I N+ + S ++P Y +K GL L
Sbjct: 140 NLRGTVFFTQAVLKAMLASDARASRSIINI-TSVSAVMTSPERLDYCMSKAGLAAFSQGL 198
Query: 196 FKESKRSKVGVHTASPGMVLTD 217
+ + V PG++ +D
Sbjct: 199 ALRLAETGIAVFEVRPGIIRSD 220
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-26
Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 33/201 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+++ +G A L G RV+++ R+ + +VTEL + A
Sbjct: 35 ASQRVGLHCALRLLEHGHRVIISYRTEHA---SVTELRQ-------------------AG 72
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D + + + S+ ++NA + ++ S ++
Sbjct: 73 AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEW--LAETPGEEADNFTRMFSVHM 130
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ L ++ + I ++ D G + Y +TK GL L S
Sbjct: 131 LAPYLINLHCEPLLTAS-EVADIVHISDDVTRKG--SSKHIAYCATKAGLESLTLSFAAR 187
Query: 199 -SKRSKV-GVHTASPGMVLTD 217
+ KV G+ +P +++
Sbjct: 188 FAPLVKVNGI---APALLMFQ 205
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-26
Identities = 32/204 (15%), Positives = 70/204 (34%), Gaps = 34/204 (16%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
G+G + + L G +V + + + + EL G +
Sbjct: 16 SGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----------GE---------RSM 55
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ DV AD + G++++ +NNAG + E+ +++ N
Sbjct: 56 FVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTES 114
Query: 142 SILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
+ ++ + M++ GG I NM + A Y ++K + L + +
Sbjct: 115 VFIGCQQGIAAMKET--GGSIINMASVSSWLPI--EQYAGYSASKAAVSALTRAAALSCR 170
Query: 201 RSKVG-----VHTASPGMVLTDLL 219
+ +H P + T ++
Sbjct: 171 KQGYAIRVNSIH---PDGIYTPMM 191
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-26
Identities = 31/200 (15%), Positives = 57/200 (28%), Gaps = 29/200 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G A +G V S + ELE
Sbjct: 9 VKHFGGMGSALRLSEAGHTVACHDESFK----QKDELEA-------------------FA 45
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ +L + +G +D+ ++N F+P+ ++ E+ V
Sbjct: 46 ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQ 105
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLFK 197
+ M+ + K GHI + S + Y S + G L +L K
Sbjct: 106 IRPFALVNAVASQMKKR-KSGHIIFI---TSATPFGPWKELSTYTSARAGACTLANALSK 161
Query: 198 ESKRSKVGVHTASPGMVLTD 217
E + V P + ++
Sbjct: 162 ELGEYNIPVFAIGPNYLHSE 181
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 4e-26
Identities = 40/204 (19%), Positives = 77/204 (37%), Gaps = 32/204 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+A+A + +G V+ R+ + V+ E+ GG
Sbjct: 39 AGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIA--------DGGG---------S 80
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D+ + ++ + +D+ +NNAG P + + ++++ NL
Sbjct: 81 AEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIAR-APAEEVSLGRWREVLTVNL 138
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGS-----GGSSTPLTAVYGSTKCGLRQLQAS 194
+ + +R M G I + S GG A Y ++K + L +
Sbjct: 139 DAAWVLSRSFGTAMLAH-GSGRIVTI---ASMLSFQGG---RNVAAYAASKHAVVGLTRA 191
Query: 195 LFKESKRSKVGVHTASPGMVLTDL 218
L E VGV+ +PG V+T
Sbjct: 192 LASEWAGRGVGVNALAPGYVVTAN 215
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 5e-26
Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 32/222 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
T+G+G+ +A F +G V VA RS+ + V +L++ G K
Sbjct: 18 GTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ-------LGSG---------K 61
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V G+ DV + A L+ AV EFG ID+ NAG PL T E++ I + N+
Sbjct: 62 VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD-APLATMTPEQLNGIFAVNV 120
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--PLT-----AVYGSTKCGLRQLQ 192
G+ + + + G + SS P+T + YG+TK
Sbjct: 121 NGTFYAVQACLDALIAS-GSGRVVLT-------SSITGPITGYPGWSHYGATKAAQLGFM 172
Query: 193 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 234
+ E K+ V+ PG ++T+ LL M I
Sbjct: 173 RTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSI 214
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 8e-26
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 24/203 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G A+AR G V +R +++V V L AAG
Sbjct: 32 VSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR--------AAGH---------D 74
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V G +CDV +V AV FG I I +N+AG N G + ++ TNL
Sbjct: 75 VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG-GETADLDDALWADVLDTNL 133
Query: 140 VGSILCTREAMRV--MRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
G TRE +R MR+ G I N+ G G A Y ++K G+ S+
Sbjct: 134 TGVFRVTREVLRAGGMREA-GWGRIVNIASTGGKQGV--MYAAPYTASKHGVVGFTKSVG 190
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
E ++ + V+ PG V T +
Sbjct: 191 FELAKTGITVNAVCPGYVETPMA 213
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-25
Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 31/199 (15%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ G+G A+ + G +VV S +S
Sbjct: 23 SSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDH------------------------- 57
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
DV +V++ ++G IDI +NNAG + PL E +I+ N+
Sbjct: 58 --FKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE-QYSPLHLTPTEIWRRIIDVNVN 114
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
GS L + + VM G I N+ + ++T A Y ++K L L S+ +
Sbjct: 115 GSYLMAKYTIPVMLAI-GHGSIINI-ASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA 172
Query: 201 RSKVGVHTASPGMVLTDLL 219
K+ + PG ++T ++
Sbjct: 173 P-KIRCNAVCPGTIMTPMV 190
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-25
Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 29/210 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
RG+G+A+A+ G V + E TV E++ + GG
Sbjct: 17 RGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ--------SNGG---------SA 59
Query: 81 AGIACDVCEPADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQFTNEEIEQI 134
I ++ V+ L + NE DI INNAG + + T + +++
Sbjct: 60 FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRM 118
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 194
VS N ++A+ +RD I N+ + + S P Y TK + + +
Sbjct: 119 VSVNAKAPFFIIQQALSRLRD---NSRIINI-SSAATRISLPDFIAYSMTKGAINTMTFT 174
Query: 195 LFKESKRSKVGVHTASPGMVLTDLLLSGST 224
L K+ + V+ PG V TD+ +
Sbjct: 175 LAKQLGARGITVNAILPGFVKTDMNAELLS 204
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-25
Identities = 47/201 (23%), Positives = 74/201 (36%), Gaps = 32/201 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+A F G +V R + V L +
Sbjct: 14 AASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----------EA---------E 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV +P V+ + A+ EFG + + AG E E+++ NL
Sbjct: 54 AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNL 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMD---GAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
GS L R+A V+ +GG + G G+ G A Y + K G+ L +L
Sbjct: 113 TGSFLVARKAGEVLE---EGGSLVLTGSVAGLGAFGL-----AHYAAGKLGVVGLARTLA 164
Query: 197 KESKRSKVGVHTASPGMVLTD 217
E R V V+ PG++ T
Sbjct: 165 LELARKGVRVNVLLPGLIQTP 185
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 6e-25
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RG+G+ +A+ L +G RV + +R +E+ T T L A G
Sbjct: 37 GSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS---------AYG---------D 78
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
I D+ A ++L+ +DI +NNAGT+ G L + E+++ N+
Sbjct: 79 CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWG-AALESYPVSGWEKVMQLNV 137
Query: 140 VGSILCTREAMRVMRDQP---KGGHIFN---MDGAGSGGSSTPLTAVYGSTKCGLRQLQA 193
C ++ + ++R + N + G + G YG +K L QL
Sbjct: 138 TSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAY---AYGPSKAALHQLSR 194
Query: 194 SLFKESKRSKVGVHTASPGMVLTDL 218
L KE + V+ +PG + +
Sbjct: 195 MLAKELVGEHINVNVIAPGRFPSRM 219
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 8e-25
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 34/206 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+T G+G +AR G RV V +R E +R T+ EL AG +
Sbjct: 30 ATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR--------EAGV---------E 72
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G CDV +++ L V +G +D+ +NNAG G + +E +V TNL
Sbjct: 73 ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNL 131
Query: 140 VGSILCTREAMRV--MRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKCGLRQL 191
G T++ ++ M ++ G I N+ +ST A Y ++K G+
Sbjct: 132 TGVFRVTKQVLKAGGMLER-GTGRIVNI-------ASTGGKQGVVHAAPYSASKHGVVGF 183
Query: 192 QASLFKESKRSKVGVHTASPGMVLTD 217
+L E R+ + V+ PG V T
Sbjct: 184 TKALGLELARTGITVNAVCPGFVETP 209
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 98.7 bits (247), Expect = 2e-24
Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 29/200 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RG+G+A+A + G RV +ASR+ E E ++L
Sbjct: 10 GSRGIGRAIAEALVARGYRVAIASRNPE-------EAAQSLG------------------ 44
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D+ E D + L A+ G + + ++ A N KP L+ + EE +++ +L
Sbjct: 45 AVPLPTDL-EKDDPKGLVKRALEALGGLHVLVHAAAVNV-RKPALELSYEEWRRVLYLHL 102
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ L + A M + G + + Y + K L L +L KE
Sbjct: 103 DVAFLLAQAAAPHMAEA-GWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKE 161
Query: 199 SKRSKVGVHTASPGMVLTDL 218
R + V+ PG V T+
Sbjct: 162 WARLGIRVNLLCPGYVETEF 181
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 2e-24
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 32/222 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
T+G+G+ +A F +G V VA+RS + EL E G
Sbjct: 49 GTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE-------LGAG---------N 92
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V G+ DV +P + V+ FG++D+ NAG L T E++ +++ N+
Sbjct: 93 VIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNV 151
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--PLT-----AVYGSTKCGLRQLQ 192
G++ + + + G + SS P+T + YG++K
Sbjct: 152 KGTVYTVQACLAPLTAS-GRGRVILT-------SSITGPVTGYPGWSHYGASKAAQLGFM 203
Query: 193 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 234
+ E V V+ PG +LT+ L+ M I
Sbjct: 204 RTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSI 245
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 6e-24
Identities = 41/227 (18%), Positives = 73/227 (32%), Gaps = 38/227 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
R +G ++A G RVVV S + + V EL A G
Sbjct: 19 GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA-------ARAG--------- 62
Query: 79 KVAGIACDVCEPADV----QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF-------- 126
D+ + + + + + + FG D+ +NNA PLL
Sbjct: 63 SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAAD 121
Query: 127 ---TNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNMDGAGSGGSSTPLTA 179
+ ++ ++ +N V + R R + + + N+ P
Sbjct: 122 AKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL-CDAMTDLPLPGFC 180
Query: 180 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 226
VY K L L + E + V+ +PG+ L + T +
Sbjct: 181 VYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 227
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 97.2 bits (243), Expect = 8e-24
Identities = 42/200 (21%), Positives = 77/200 (38%), Gaps = 30/200 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G A A F+ +G +V ++
Sbjct: 15 AGKGIGYATALAFVEAGAKVTGFDQAFT------------------QEQY---------P 47
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
A DV + A V ++ + E +D +N AG + Q + E+ +Q + N+
Sbjct: 48 FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQLSKEDWQQTFAVNV 106
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ ++ M R Q +GG I + + + + + YG++K L+ L S+ E
Sbjct: 107 GGAFNLFQQTMNQFRRQ-RGGAIVTV-ASDAAHTPRIGMSAYGASKAALKSLALSVGLEL 164
Query: 200 KRSKVGVHTASPGMVLTDLL 219
S V + SPG TD+
Sbjct: 165 AGSGVRCNVVSPGSTDTDMQ 184
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 2e-23
Identities = 42/241 (17%), Positives = 81/241 (33%), Gaps = 32/241 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVA-------------SRSSESVRMTVTELEENLKEGMMAAG 68
RG G+A A G ++ S + + TV +E AA
Sbjct: 21 RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE--------AAN 72
Query: 69 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 128
++ D + ++K+ + V G +DI + NAG + T
Sbjct: 73 R---------RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA-APQAWDDITP 122
Query: 129 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 188
E+ ++ N+ G+ + + +GG I + + +G P Y ++K +
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILI-SSAAGMKMQPFMIHYTASKHAV 181
Query: 189 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248
L + E + + V++ PG V T + Q +L + L
Sbjct: 182 TGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDW 241
Query: 249 I 249
+
Sbjct: 242 V 242
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 2e-23
Identities = 51/248 (20%), Positives = 91/248 (36%), Gaps = 41/248 (16%)
Query: 22 RGLGKALAREFLLSGDRVVVA-------------SRSSESVRMTVTELEENLKEGMMAAG 68
RG G++ A G ++ S E + T +E G
Sbjct: 25 RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE--------DQG 76
Query: 69 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 128
K DV + A +++L + +FG +D+ + NAG + + + T+
Sbjct: 77 R---------KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTD 126
Query: 129 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 188
E+ + ++ NL G+ R + M + GG I + + +G +TP Y ++K GL
Sbjct: 127 EQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVV-SSSAGLKATPGNGHYSASKHGL 185
Query: 189 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV---ARTL 245
L +L E + V++ P V T + I+ + M I P V
Sbjct: 186 TALTNTLAIELGEYGIRVNSIHPYSVETPM------IEPEAMMEIFARHPSFVHSFPPMP 239
Query: 246 VPRIRVVK 253
V +
Sbjct: 240 VQPNGFMT 247
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 94.5 bits (236), Expect = 8e-23
Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 28/198 (14%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
+G+G+A A F G +V+ + ++ ELE+ +
Sbjct: 16 QGIGQAAALAFAREGAKVIATDINESKLQ----ELEKYPG------------------IQ 53
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
DV + + + NE +D+ N AG +L ++ + ++ N+
Sbjct: 54 TRVLDVTKKKQIDQ----FANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRS 108
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
L + + M Q K G+I NM S VY +TK + L S+ + +
Sbjct: 109 MYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQ 167
Query: 202 SKVGVHTASPGMVLTDLL 219
+ + PG V T L
Sbjct: 168 QGIRCNCVCPGTVDTPSL 185
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 8e-23
Identities = 40/221 (18%), Positives = 79/221 (35%), Gaps = 34/221 (15%)
Query: 22 RGLGKALAREFLLSGDRVVVA----------------SRSSESVRMTVTELEENLKEGMM 65
RG G++ A G ++ + + E + T ++
Sbjct: 21 RGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK-------- 72
Query: 66 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ 125
++ DV + ++ + V + G +DI + NAG G L +
Sbjct: 73 GHNR---------RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDK 123
Query: 126 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTK 185
+ E+ +++ NL G + + M +GG I + G + P T Y + K
Sbjct: 124 TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT-SSVGGLKAYPHTGHYVAAK 182
Query: 186 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 226
G+ L + E + + V++ P V T +L + T +
Sbjct: 183 HGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFK 223
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 94.9 bits (237), Expect = 9e-23
Identities = 45/206 (21%), Positives = 77/206 (37%), Gaps = 31/206 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
T+GLGK + + L G V V S E +KE +
Sbjct: 15 GTKGLGKQVTEKLLAKGYSVTVTYHSDT-------TAMETMKETYKDVEE---------R 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNEEIEQIVS 136
+ + DV + D+ K+ A++ FG ID INNAG + L+ + +E +++
Sbjct: 59 LQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKK--LVDYEEDEWNEMIQ 116
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-----AVYGSTKCGLRQL 191
NL + + VMR Q G I N + + + + K GL L
Sbjct: 117 GNLTAVFHLLKLVVPVMRKQ-NFGRIINY----GFQGADSAPGWIYRSAFAAAKVGLVSL 171
Query: 192 QASLFKESKRSKVGVHTASPGMVLTD 217
++ E + + PG ++ +
Sbjct: 172 TKTVAYEEAEYGITANMVCPGDIIGE 197
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 94.9 bits (237), Expect = 1e-22
Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 35/210 (16%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESV--RMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G+A A + G V + +E + +E G K
Sbjct: 59 SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE--------ECGR---------K 101
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D+ + + + L + A G +DI AG + T+E+ +Q + N+
Sbjct: 102 AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS------TPLTAVYGSTKCGLRQLQA 193
T+EA+ ++ PKG I SS +P Y +TK +
Sbjct: 162 FALFWITQEAIPLL---PKGASIITT-------SSIQAYQPSPHLLDYAATKAAILNYSR 211
Query: 194 SLFKESKRSKVGVHTASPGMVLTDLLLSGS 223
L K+ + V+ +PG + T L +SG
Sbjct: 212 GLAKQVAEKGIRVNIVAPGPIWTALQISGG 241
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 93.3 bits (233), Expect = 2e-22
Identities = 46/202 (22%), Positives = 76/202 (37%), Gaps = 34/202 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+A F G R+V +R +
Sbjct: 13 AAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----------------------G 50
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
+ DV +PA V++ A+ G +D ++ AG T F + E+ E ++ N
Sbjct: 51 AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNF--HWKMPLEDWELVLRVN 108
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMD---GAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
L GS L + A MR++ G I G+ G A Y ++ G+ L +L
Sbjct: 109 LTGSFLVAKAASEAMREK-NPGSIVLTASRVYLGNLGQ-----ANYAASMAGVVGLTRTL 162
Query: 196 FKESKRSKVGVHTASPGMVLTD 217
E R + V+T +PG + T
Sbjct: 163 ALELGRWGIRVNTLAPGFIETR 184
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 3e-22
Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 14/148 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+A++ G V + + TV L + G
Sbjct: 15 AGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG----------N 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSI-DIWINNAG-TNKGFKPLLQFTNEEIEQIVST 137
A DV E + L F + ++ AG T F LL + ++ +++++
Sbjct: 65 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--LLHMSEDDWDKVIAV 122
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNM 165
NL G+ L T+ A + + G I N+
Sbjct: 123 NLKGTFLVTQAAAQALVSNGCRGSIINI 150
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 9e-22
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ RG+G+ +A+ S V+ SR+ +S V E++ + G +
Sbjct: 52 AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK--------SFGY---------E 94
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
+G A DV + ++ ++ N + E ++DI +NNAG T L+ N+E E ++ TN
Sbjct: 95 SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNL--FLRMKNDEWEDVLRTN 152
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L T+ + M + + G I N+
Sbjct: 153 LNSLFYITQPISKRMINN-RYGRIINI 178
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 2e-21
Identities = 33/198 (16%), Positives = 57/198 (28%), Gaps = 45/198 (22%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
+ LG A+ L V+ A R S V
Sbjct: 12 SGTLGSAVKER-LEKKAEVITAGRHSGDVT------------------------------ 40
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
D+ ++K+ + G +D ++ G+ F PL + T E+ +S+ L
Sbjct: 41 ----VDITNIDSIKKM----YEQVGKVDAIVSATGSAT-FSPLTELTPEKNAVTISSKLG 91
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G I + + D G G A + S E
Sbjct: 92 GQINLVLLGIDSLND---KGSFTLTTGI-MMEDPIVQGASAAMANGAVTAFAKSAAIEMP 147
Query: 201 RSKVGVHTASPGMVLTDL 218
R + ++T SP ++
Sbjct: 148 R-GIRINTVSPNVLEESW 164
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 2e-21
Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 38/222 (17%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+ + +G+A+A + +G RVV+ +S E+ EL +
Sbjct: 31 AAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK-------ERSN--------- 74
Query: 79 KVAGIACDVCE----PADVQKLSNFAVNEFGSIDIWINNAGTNKGF---------KPLLQ 125
D+ PA +++ N FG D+ +NNA +
Sbjct: 75 TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 126 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGSGGSSTPLTA 179
++ +++ TN + L T + + I N+ D +
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP--CMAFS 192
Query: 180 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221
+Y K L L S E + V+ +PG+ L + +
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 234
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 2e-21
Identities = 42/217 (19%), Positives = 78/217 (35%), Gaps = 30/217 (13%)
Query: 22 RGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKEGMMAAGG 69
RG G++ A G ++ + + + TV ++E A G
Sbjct: 38 RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE--------ALGR 89
Query: 70 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 129
++ DV + +Q + V + G +DI + NA L + +
Sbjct: 90 ---------RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPK 140
Query: 130 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 189
++ NL G+ + R A+ + +GG I + G Y ++K GL
Sbjct: 141 TWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFT-SSIGGLRGAENIGNYIASKHGLH 199
Query: 190 QLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 226
L ++ E + V+ P V T +LL+ T +
Sbjct: 200 GLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYR 236
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 90.2 bits (225), Expect = 3e-21
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 20/147 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
++RG+GKA+A +G +V+V +RS+++ ++E A GG
Sbjct: 9 ASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIE--------AYGG--------- 51
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ DV + ADV+ + A++ +G+ID+ +NNAG + L++ + ++++ N
Sbjct: 52 QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD-TLLIRMKKSQWDEVIDLN 110
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L G LCT+ A ++M + + G I N+
Sbjct: 111 LTGVFLCTQAATKIMMKK-RKGRIINI 136
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 5e-21
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A E G V+ + + + AG +
Sbjct: 36 ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK--------QAGL---------E 78
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
G +V + V L + EFG++++ +NNAG T ++ ++E + ++ TN
Sbjct: 79 GRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQL--AMRMKDDEWDAVIDTN 136
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L +R +R M +GG I N+
Sbjct: 137 LKAVFRLSRAVLRPMMKA-RGGRIVNI 162
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 6e-21
Identities = 30/199 (15%), Positives = 56/199 (28%), Gaps = 31/199 (15%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
LG + F V E + +
Sbjct: 17 GALGSRCVQAFRARNWWVASIDVVEN-------EEAS------------------ASVIV 51
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 141
+ E AD + +D + AG G + + + + ++
Sbjct: 52 KMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWT 111
Query: 142 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 201
S + + A + ++ +GG + GA + TP YG K + QL SL ++
Sbjct: 112 STISSHLATKHLK---EGGLLTLA-GAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSG 167
Query: 202 SKVG--VHTASPGMVLTDL 218
G P + T +
Sbjct: 168 MPSGAAAIAVLPVTLDTPM 186
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 89.1 bits (222), Expect = 7e-21
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+RGLGKA+A + G +V+ + + E AAG
Sbjct: 13 SSRGLGKAIAWKLGNMGANIVLNGSPAS-------TSLDATAEEFKAAGI---------N 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
V DV P DV+ + A++ FG IDI +NNAG T +L+ + ++ + +++TN
Sbjct: 57 VVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL--MLKMSEKDWDDVLNTN 114
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L + LCT+ ++M Q K G I N+
Sbjct: 115 LKSAYLCTKAVSKIMLKQ-KSGKIINI 140
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 89.5 bits (223), Expect = 8e-21
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 18/146 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A E +G +V V SS + + + AAGG +
Sbjct: 36 ASRGIGRAIALELAAAGAKVAVNYASSA-------GAADEVVAAIAAAGG---------E 79
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV + ++V+ L + +G +D+ +NNAG + LL+ ++ + ++ NL
Sbjct: 80 AFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD-TLLLRMKRDDWQSVLDLNL 138
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNM 165
G LC+R A ++M Q + G I N+
Sbjct: 139 GGVFLCSRAAAKIMLKQ-RSGRIINI 163
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 88.3 bits (220), Expect = 1e-20
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
STRG+G+A+A + +G V++ S E + +E G K
Sbjct: 15 STRGIGRAIAEKLASAGSTVIITGTSGE-------RAKAVAEEIANKYGV---------K 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
G+ ++ + K N IDI +NNAG T L+ + + E+++ N
Sbjct: 59 AHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL--FLRMSLLDWEEVLKVN 116
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L G+ L T+ ++R M Q + G I N+
Sbjct: 117 LTGTFLVTQNSLRKMIKQ-RWGRIVNI 142
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 2e-20
Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 39/200 (19%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A G V + +R+ EE LK +
Sbjct: 27 ASRGIGRAVADVLSQEGAEVTICARN-----------EELLKR---------------SG 60
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ CD+ + D+ + +DI + NAG K + TNE+ ++ + +
Sbjct: 61 HRYVVCDLRKDLDL------LFEKVKEVDILVLNAGGPKA-GFFDELTNEDFKEAIDSLF 113
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFK 197
+ I R + M+++ G I + S +P+ S + L +L
Sbjct: 114 LNMIKIVRNYLPAMKEK-GWGRIVAI---TSFSVISPIENLYTSNSARMALTGFLKTLSF 169
Query: 198 ESKRSKVGVHTASPGMVLTD 217
E + V+ +PG T+
Sbjct: 170 EVAPYGITVNCVAPGWTETE 189
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 2e-20
Identities = 45/201 (22%), Positives = 73/201 (36%), Gaps = 25/201 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G ++ + G RVV + E A G
Sbjct: 21 GMGGIGTSICQRLHKDGFRVVAGCGPNS-------PRRVKWLEDQKALGF---------D 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
+V + ++ + E G ID+ +NNAG T + T E+ + ++ TN
Sbjct: 65 FYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVV--FRKMTREDWQAVIDTN 122
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLF 196
L T++ + M ++ G I N+ S G Y + K G+ SL
Sbjct: 123 LTSLFNVTKQVIDGMVER-GWGRIINI---SSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 178
Query: 197 KESKRSKVGVHTASPGMVLTD 217
+E V V+T SPG + TD
Sbjct: 179 QEVATKGVTVNTVSPGYIGTD 199
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-20
Identities = 35/229 (15%), Positives = 66/229 (28%), Gaps = 25/229 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGS-SKKNLVH 77
+ + LG+++A G V + RS+ L + S
Sbjct: 17 AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAP 76
Query: 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE------- 130
A + V +L +G D+ +NNA + PLL+ +
Sbjct: 77 VSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGD 135
Query: 131 -------IEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGSGGSSTPL 177
+ +N + + + P I NM D +
Sbjct: 136 REAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--LLG 193
Query: 178 TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 226
+Y K L L S E ++ V+ PG+ + + + +
Sbjct: 194 YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWE 242
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 2e-20
Identities = 30/201 (14%), Positives = 57/201 (28%), Gaps = 35/201 (17%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
LG A+ F +G V+ S+
Sbjct: 13 GALGSAILEFFKKNGYTVLNIDLSAND---------------------------QADSNI 45
Query: 82 GIACDVCEPADVQKLSNFAVNE--FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + Q + + +D AG G + + + ++ ++
Sbjct: 46 LVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSV 105
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
S + + A ++ GG + GA + TP YG K + L +SL +
Sbjct: 106 WSSAIAAKLATTHLK---PGGLLQLT-GAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKD 161
Query: 200 KRSKVG--VHTASPGMVLTDL 218
V T P + T +
Sbjct: 162 SGLPDNSAVLTIMPVTLDTPM 182
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 87.5 bits (218), Expect = 2e-20
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A + G VVV +E + + + + G
Sbjct: 12 ASRGIGRAIAIDLAKQGANVVVNYAGNE-------QKANEVVDEIKKLGS---------D 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
+ DV DV + V+ FG +DI +NNAG T L++ EE + +++TN
Sbjct: 56 AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNL--LMRMKEEEWDTVINTN 113
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L G LCT+ R M Q + G I N+
Sbjct: 114 LKGVFLCTKAVSRFMMRQ-RHGRIVNI 139
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 3e-20
Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G +A G VV + S S ++ G K
Sbjct: 13 ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK--------EKGF---------K 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
G+ ++ + +Q E +IDI +NNAG T +++ + +E + +++TN
Sbjct: 56 ARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNL--MMRMSEDEWQSVINTN 113
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L ++E +R M + + G I ++
Sbjct: 114 LSSIFRMSKECVRGMMKK-RWGRIISI 139
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 4e-20
Identities = 35/219 (15%), Positives = 63/219 (28%), Gaps = 25/219 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGS-SKKNLVH 77
+ + LG+++A G V + RS+ L + S
Sbjct: 54 AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAP 113
Query: 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE------- 130
A + V +L +G D+ +NNA + PLL+ +
Sbjct: 114 VSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGD 172
Query: 131 -------IEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGSGGSSTPL 177
+ +N + + + P I NM D +
Sbjct: 173 REAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--LLG 230
Query: 178 TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216
+Y K L L S E ++ V+ PG+ +
Sbjct: 231 YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 269
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 4e-20
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+++A + G V V S+ E E + E + A G
Sbjct: 12 ASRGIGRSIALQLAEEGYNVAVNYAGSK-------EKAEAVVEEIKAKGV---------D 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
I +V + +V+ + V++FGS+D+ +NNAG T L++ +E + ++ TN
Sbjct: 56 SFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTN 113
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L G C ++A M Q + G I N+
Sbjct: 114 LKGVFNCIQKATPQMLRQ-RSGAIINL 139
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 6e-20
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
GLG A++R +G V V+ + AG
Sbjct: 33 GMGGLGAAISRRLHDAGMAVAVSHSERN-------DHVSTWLMHERDAGR---------D 76
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
A DV + ++ + + +FG +D+ INNAG T ++ T + + ++ T+
Sbjct: 77 FKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDAT--FMKMTKGDWDAVMRTD 134
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLF 196
L T++ + M ++ + G I N+ GS G A Y S K G+ +L
Sbjct: 135 LDAMFNVTKQFIAGMVER-RFGRIVNI---GSVNGSRGAFGQANYASAKAGIHGFTKTLA 190
Query: 197 KESKRSKVGVHTASPGMVLTD 217
E+ + + V+T SPG + T
Sbjct: 191 LETAKRGITVNTVSPGYLATA 211
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 7e-20
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A G + + + E E + E G
Sbjct: 9 ASRGIGRAIALRLAEDGFALAIHYGQNR-------EKAEEVAEEARRRGSPL-------- 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
VA + ++ E L + A G +D +NNAG T L++ +E+ E ++ N
Sbjct: 54 VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTL--LVRMKDEDWEAVLEAN 111
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L TREA+++M + G I N+
Sbjct: 112 LSAVFRTTREAVKLMMKA-RFGRIVNI 137
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 9e-20
Identities = 40/213 (18%), Positives = 72/213 (33%), Gaps = 37/213 (17%)
Query: 22 RGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKEGMMAAGG 69
RG G+A A G ++ + E + TV +E G
Sbjct: 23 RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE--------DIGS 74
Query: 70 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 129
++ DV + + ++E G +DI + NAG + ++
Sbjct: 75 ---------RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-----MSAGDD 120
Query: 130 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM---DGAGSGGSSTPLTAVYGSTKC 186
++ NL G + A+ + Q GG I + G GS+ P + Y + K
Sbjct: 121 GWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKH 180
Query: 187 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219
G+ L + V++ P V T ++
Sbjct: 181 GVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI 213
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 85.6 bits (213), Expect = 1e-19
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+GKA+A G +V+ + S + L +
Sbjct: 17 ASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--------------------N 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
G+A +V P ++ + +EFG +DI +NNAG T L++ EE I+ TN
Sbjct: 57 GKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETN 114
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L ++ +R M + + G I N+
Sbjct: 115 LTSIFRLSKAVLRGMMKK-RQGRIINV 140
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 2e-19
Identities = 40/262 (15%), Positives = 81/262 (30%), Gaps = 53/262 (20%)
Query: 22 RGLGKALAREFLLSGDRVVV--ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G L ++ + + + +R E TEL+ + ++
Sbjct: 13 RGIGLGLVQQLVKDKNIRHIIATARDVEKA----TELKS----------------IKDSR 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 137
V + V + + G + + INNAG + + I + +
Sbjct: 53 VHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV 112
Query: 138 NLVGSILCTREAMRVMR----------DQPKGGHIFNMD-GAGS-----GGSSTPLTAVY 181
N +L T++ + +++ + + G GS GS+ Y
Sbjct: 113 NTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAY 172
Query: 182 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241
+K + +L + K V V PG V T+L + + E
Sbjct: 173 RMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALT-----------VEQS 221
Query: 242 ARTLVPRIRVVKG--SGKAINY 261
L+ + +G+
Sbjct: 222 TAELISSFNKLDNSHNGRFFMR 243
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-19
Identities = 32/211 (15%), Positives = 62/211 (29%), Gaps = 38/211 (18%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG+A R G VV+A ++E + EL G +
Sbjct: 40 GGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----------GN---------RAE 79
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVST 137
++ +V V A + + G + + + +
Sbjct: 80 FVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139
Query: 138 NLVGSILCTREAMRVMRDQPK-----GGHIFNMDG----AGSGGSSTPLTAVYGSTKCGL 188
L G+ R + G + G G Y + K G+
Sbjct: 140 YLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ-----TAYAAAKAGV 194
Query: 189 RQLQASLFKESKRSKVGVHTASPGMVLTDLL 219
L + ++ + + V+T +PG + T ++
Sbjct: 195 IGLTIAAARDLSSAGIRVNTIAPGTMKTPIM 225
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 3e-19
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 37/201 (18%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G A+A+ G +V V R S +
Sbjct: 23 GNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------------KG 54
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
+ G+ DV + V + G +++ ++NAG + F L++ T E+ E++++ N
Sbjct: 55 LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINAN 112
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLF 196
L G+ + A R M+ K G + + GS G A Y ++K G+ + S+
Sbjct: 113 LTGAFRVAQRASRSMQRN-KFGRMIFI---GSVSGLWGIGNQANYAASKAGVIGMARSIA 168
Query: 197 KESKRSKVGVHTASPGMVLTD 217
+E ++ V + +PG + TD
Sbjct: 169 RELSKANVTANVVAPGYIDTD 189
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 3e-19
Identities = 49/261 (18%), Positives = 83/261 (31%), Gaps = 48/261 (18%)
Query: 20 STRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 76
RGLG L + L + R+ E ELE+ K
Sbjct: 29 CNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA----KELEDLAKN-------------- 70
Query: 77 HAKVAGIACDVCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQI 134
H+ + + D+ KL +++ NNAG + ++E+
Sbjct: 71 HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDT 130
Query: 135 VSTNLVGSILCTR----------EAMRVMRDQPKGGHIFNMD-GAGS-GGSSTPLTAVYG 182
+ TN V I+ + +A I NM GS G++ Y
Sbjct: 131 LQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYR 190
Query: 183 STKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA 242
++K L SL + ++ + PG V TD+ S + + T
Sbjct: 191 TSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLD-----------VPTST 239
Query: 243 RTLVPRIRVVKG--SGKAINY 261
+V I + +G +NY
Sbjct: 240 GQIVQTISKLGEKQNGGFVNY 260
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 3e-19
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 39/202 (19%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G A+AR F +GD+V + RS E
Sbjct: 29 GNRGIGLAIARAFADAGDKVAITYRSGEPP----------------------------EG 60
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
+ CD+ + V++ G +++ I NAG T L++ + E+ +V TN
Sbjct: 61 FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDFTSVVETN 118
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQASLF 196
L G+ + A R M K G + + S G + A Y ++K GL SL
Sbjct: 119 LTGTFRVVKRANRAMLRA-KKGRVVLI---SSVVGLLGSAGQANYAASKAGLVGFARSLA 174
Query: 197 KE-SKRSKVGVHTASPGMVLTD 217
+E R+ + + +PG V TD
Sbjct: 175 RELGSRN-ITFNVVAPGFVDTD 195
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 7e-19
Identities = 46/217 (21%), Positives = 72/217 (33%), Gaps = 45/217 (20%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG A A + G V+ + +L G
Sbjct: 22 SGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----------GN---------NCV 61
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ-----FTNEEIEQIVS 136
DV DVQ A +FG +D+ +N AG K T E+ ++++
Sbjct: 62 FAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD 121
Query: 137 TNLVGSILCTREAMRVMRDQPKG-----GHIFNM------DG-AGSGGSSTPLTAVYGST 184
NL+G+ R M G I N +G G A Y ++
Sbjct: 122 VNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ--------AAYSAS 173
Query: 185 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221
K G+ + + ++ + V T +PG+ T LL S
Sbjct: 174 KGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS 210
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 7e-19
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 43/223 (19%)
Query: 22 RGLGKA----LARE--------FLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 69
RG G+ LA++ + A S E ++ TV +E G
Sbjct: 56 RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE--------EQGR 107
Query: 70 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 129
++ DV + A +Q + + A+ EFG IDI ++N G + ++ T++
Sbjct: 108 ---------RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQ 157
Query: 130 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGS 183
+ I+ TNL+G+ R + M ++ +GG + + SST P + Y +
Sbjct: 158 QWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFV-------SSTVGLRGAPGQSHYAA 210
Query: 184 TKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 226
+K G++ L SL E R + V++ +PG V T++ L+ ++
Sbjct: 211 SKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLK 253
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 1e-18
Identities = 41/202 (20%), Positives = 67/202 (33%), Gaps = 28/202 (13%)
Query: 22 RGLGKALAREFL---LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
G+G LA +V R + T L E + G
Sbjct: 12 SGIGLHLAVRLASDPSQSFKVYATLRDLK----TQGRLWEAARALACPPGS--------- 58
Query: 79 KVAGIACDVCEPADVQKLSNFAVNE--FGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIV 135
+ + DV + V A G +D+ + NAG G PL + + ++
Sbjct: 59 -LETLQLDVRDSKSVAA----ARERVTEGRVDVLVCNAGL--GLLGPLEALGEDAVASVL 111
Query: 136 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
N+VG++ + + M+ + G + G+ G P VY ++K L L SL
Sbjct: 112 DVNVVGTVRMLQAFLPDMKRR-GSGRVLVT-GSVGGLMGLPFNDVYCASKFALEGLCESL 169
Query: 196 FKESKRSKVGVHTASPGMVLTD 217
V + G V T
Sbjct: 170 AVLLLPFGVHLSLIECGPVHTA 191
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 1e-18
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+T G+G+A+AR F G V + + ++ +L G
Sbjct: 35 ATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----------GK---------D 74
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTN 138
V + ++ + +++L+ A E IDI +NNAG T G ++ +++ + +++ N
Sbjct: 75 VFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGL--FVRMQDQDWDDVLAVN 132
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
L + TRE + M + + G I N+
Sbjct: 133 LTAASTLTRELIHSMMRR-RYGRIINI 158
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 1e-18
Identities = 53/215 (24%), Positives = 74/215 (34%), Gaps = 43/215 (20%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG A+ R G V+ + EL G V
Sbjct: 17 SGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----------GA---------AVR 56
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNEEIEQIVSTN 138
DV AD FA EFG + +N AGT G K L + + + V+ N
Sbjct: 57 FRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVN 116
Query: 139 LVGSILCTREAMRVMRDQP-----KGGHIFNM------DG-AGSGGSSTPLTAVYGSTKC 186
L+G+ R A VM + G I N DG G A Y ++K
Sbjct: 117 LIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQ--------AAYAASKG 168
Query: 187 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221
G+ L +E R + V T +PG+ T ++
Sbjct: 169 GVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG 203
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 3e-18
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 34/201 (16%)
Query: 22 RGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEGMMAAGGSSK 72
GLGK + EF G +VVV +S++ + V E+ GG +
Sbjct: 18 GGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV--------KNGGVAV 69
Query: 73 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 132
+ +V D K+ AV FG++ + INNAG + + + T ++ +
Sbjct: 70 AD---------YNNV---LDGDKIVETAVKNFGTVHVIINNAGILRD-ASMKKMTEKDYK 116
Query: 133 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 191
++ +L G+ T+ A + Q K G I N AG G+ A Y S K L
Sbjct: 117 LVIDVHLNGAFAVTKAAWPYFQKQ-KYGRIVNTSSPAGLYGN--FGQANYASAKSALLGF 173
Query: 192 QASLFKESKRSKVGVHTASPG 212
+L KE + + + +P
Sbjct: 174 AETLAKEGAKYNIKANAIAPL 194
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 1e-16
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+ GLGK A+ F G +VVV + + V E++ AAGG
Sbjct: 330 AGAGLGKEYAKWFAKYGAKVVVNDFKDATKT---VDEIK--------AAGG--------- 369
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ DV + D + + ++++G+IDI +NNAG + + + + +E + + +
Sbjct: 370 EAWPDQHDVAK--DSEAIIKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWDSVQQVH 426
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L+G+ +R A ++ + G I N+ + SG A Y S+K G+ L ++ E
Sbjct: 427 LIGTFNLSRLAWPYFVEK-QFGRIINI-TSTSGIYGNFGQANYSSSKAGILGLSKTMAIE 484
Query: 199 SKRSKVGVHTASPG 212
++ + V+ +P
Sbjct: 485 GAKNNIKVNIVAPH 498
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 4e-18
Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 32/200 (16%)
Query: 22 RGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEGMMAAGGSSK 72
GLG+ A F G +VVV S + + V E+ AGG
Sbjct: 29 AGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR--------KAGG--- 77
Query: 73 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 132
+ V D K+ A+ FG +DI +NNAG + + L++ + ++
Sbjct: 78 ------EAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRD-RSLVKTSEQDWN 127
Query: 133 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 192
+ +L GS CT+ A M+ Q G I +G G+ Y + K GL L
Sbjct: 128 LVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN--FGQVNYTAAKMGLIGLA 185
Query: 193 ASLFKESKRSKVGVHTASPG 212
++ E R+ V + P
Sbjct: 186 NTVAIEGARNNVLCNVIVPT 205
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 5e-18
Identities = 52/201 (25%), Positives = 81/201 (40%), Gaps = 34/201 (16%)
Query: 22 RGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEGMMAAGGSSK 72
GLG+A A F G VVV + S + V E+ GG +
Sbjct: 19 GGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR--------RRGGKAV 70
Query: 73 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 132
N V +KL A++ FG ID+ +NNAG + + + ++E+ +
Sbjct: 71 AN---------YDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDEDWD 117
Query: 133 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 191
I +L GS TR A M+ Q G I +G G+ A Y + K GL L
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGN--FGQANYSAAKLGLLGL 174
Query: 192 QASLFKESKRSKVGVHTASPG 212
+L E +++ + +T +P
Sbjct: 175 ANTLVIEGRKNNIHCNTIAPN 195
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 5e-18
Identities = 43/225 (19%), Positives = 67/225 (29%), Gaps = 45/225 (20%)
Query: 22 RGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKEGMMAAGG 69
RG G++ A + G +++ +S + E+E G
Sbjct: 20 RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE--------KTGR 71
Query: 70 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 129
K DV + A V + AV EFG +D+ + NAG +
Sbjct: 72 ---------KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI---CPLGAHLPVQ 119
Query: 130 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM----------DGAGSGGSSTPLTA 179
+ VG I A+ + G I G+GG P A
Sbjct: 120 AFADAFDVDFVGVINTVHAALPYLT---SGASIITTGSVAGLIAAAQPPGAGGPQGPGGA 176
Query: 180 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 224
Y K + L + + + P V TD+L S
Sbjct: 177 GYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM 221
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 7e-18
Identities = 41/217 (18%), Positives = 77/217 (35%), Gaps = 34/217 (15%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
G+G+A++ F G + +A E T +E G K
Sbjct: 57 SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE--------KEGV---------KC 99
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ D+ + + + V + GS++I +NN + L T E++E+ N+
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS------TPLTAVYGSTKCGLRQLQAS 194
T+ A+ + +G I N +S Y +TK + S
Sbjct: 160 SYFHVTKAALSHL---KQGDVIINT-------ASIVAYEGNETLIDYSATKGAIVAFTRS 209
Query: 195 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231
L + + + V+ +PG + T L+ S + F
Sbjct: 210 LSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF 246
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 8e-18
Identities = 57/239 (23%), Positives = 89/239 (37%), Gaps = 40/239 (16%)
Query: 22 RGLGKALAREFLLSGDRVVV----------ASRSSESVRMTVTELEENLKEGMMAAGGSS 71
G+G+A A F G RVVV + + + V E+ AAGG
Sbjct: 37 GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT--------AAGG-- 86
Query: 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 131
+ +V + L AV FG +D+ +NNAG + + + + EE
Sbjct: 87 -------EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRD-RMIANTSEEEF 138
Query: 132 EQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIFNMD-GAGSGGSSTPLTAVYGSTK 185
+ +++ +L G R A R G I N GAG GS Y + K
Sbjct: 139 DAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS--VGQGNYSAAK 196
Query: 186 CGLRQLQASLFKESKRSKVGVHTASPGMV--LTDLLLSGSTIQNKQMFNIICELPETVA 242
G+ L E R V V+ +P +T+ + + Q F+ + PE V+
Sbjct: 197 AGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAM--APENVS 253
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 5e-17
Identities = 27/206 (13%), Positives = 53/206 (25%), Gaps = 29/206 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S G+G AL +G V+ R + ++ +
Sbjct: 9 SASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPG--------------------GR 48
Query: 80 VAGIACDVCEPADVQ-KLSNFA----VNEFGSIDIWINNAGTNKGFKPLL-QFTNEEIEQ 133
+A + V L A + + +N G + L + +
Sbjct: 49 ETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPA 108
Query: 134 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 193
V + + + ++ G Y +K + L
Sbjct: 109 AVIVGSIAATQPGAAELPMVEAM-LAGDEARA--IELAEQQGQTHLAYAGSKYAVTCLAR 165
Query: 194 SLFKESKRSKVGVHTASPGMVLTDLL 219
+ V ++ +PG V T LL
Sbjct: 166 RNVVDWAGRGVRLNVVAPGAVETPLL 191
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 5e-17
Identities = 25/146 (17%), Positives = 63/146 (43%), Gaps = 26/146 (17%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G A+AR G +V+++ + E ++ L++
Sbjct: 22 ASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD--------------------N 61
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
C++ + L +++ ++DI + NAG ++ +++ ++++ NL
Sbjct: 62 YTIEVCNLANKEECSNL----ISKTSNLDILVCNAGITSD-TLAIRMKDQDFDKVIDINL 116
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNM 165
+ + REA++ M + + G I N+
Sbjct: 117 KANFILNREAIKKMIQK-RYGRIINI 141
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 2e-16
Identities = 47/229 (20%), Positives = 84/229 (36%), Gaps = 28/229 (12%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRM-----TVTELEENLKEGMMAAGGSSKKNLV 76
RG+G++ A +G + + R S + T +L E + + G
Sbjct: 20 RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVAL-VEKTGR------- 71
Query: 77 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 136
+ DV + A ++ A + G IDI I NAG + L + + + ++++
Sbjct: 72 --RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIG 128
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQAS 194
TNL G+ M + G I + S G S+ A Y S+K G+ L
Sbjct: 129 TNLTGTFNTIAAVAPGMIKR-NYGRIVTV---SSMLGHSANFAQASYVSSKWGVIGLTKC 184
Query: 195 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243
+ + V+ +PG + T + N +F + E
Sbjct: 185 AAHDLVGYGITVNAVAPGNIETPM------THNDFVFGTMRPDLEKPTL 227
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 1e-15
Identities = 42/241 (17%), Positives = 77/241 (31%), Gaps = 60/241 (24%)
Query: 20 STRGLGKALAREFL-LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+G+G A+ R+ L VV+ +R + V +L+
Sbjct: 12 GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----------------GL 54
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
D+ + ++ L +F E+G +D+ +NNAG + + E + TN
Sbjct: 55 SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA-FKVADPTPFHIQAEVTMKTN 113
Query: 139 LVGSILCTREAMRVMRDQP----------KGGHIFNMDGAGSGGSSTPLT---------- 178
G+ E + +++ Q S +T
Sbjct: 114 FFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNK 173
Query: 179 -----------------AVYGSTKCGL----RQLQASLFKESKRSKVGVHTASPGMVLTD 217
+ YG TK G+ R L ++ K K+ ++ PG V TD
Sbjct: 174 FVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 233
Query: 218 L 218
+
Sbjct: 234 M 234
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-14
Identities = 53/217 (24%), Positives = 80/217 (36%), Gaps = 49/217 (22%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG A + L +G +VVV E V V +L +
Sbjct: 19 SGLGLATTKRLLDAGAQVVVLDIRGEDV---VADLGDR--------------------AR 55
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNEEIEQIVSTN 138
A DV + A V + G++ I +N AGT + L + F+ +IV N
Sbjct: 56 FAAADVTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDIN 114
Query: 139 LVGSILCTREAMRVMRDQP-------KGGHIFNM------DG-AGSGGSSTPLTAVYGST 184
LVGS R A + + G I N DG G A Y ++
Sbjct: 115 LVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQ--------AAYSAS 166
Query: 185 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221
K G+ + + ++ ++ V T +PG+ T LL S
Sbjct: 167 KGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS 203
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 2e-14
Identities = 48/213 (22%), Positives = 71/213 (33%), Gaps = 53/213 (24%)
Query: 22 RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81
GLG+A A G RVVV E +
Sbjct: 12 SGLGRAAALALKARGYRVVVLDLRREG-----------------------------EDLI 42
Query: 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNEEIEQIVSTN 138
+ DV DV++ A E + ++ AG K L + E +++ N
Sbjct: 43 YVEGDVTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVN 101
Query: 139 LVGSILCTREAMRVMRDQPKG-----GHIFNM------DG-AGSGGSSTPLTAVYGSTKC 186
L+G+ R A MR+ P G I N +G G A Y ++K
Sbjct: 102 LLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ--------AAYAASKG 153
Query: 187 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219
G+ L +E + V T +PG+ T LL
Sbjct: 154 GVVALTLPAARELAGWGIRVVTVAPGLFDTPLL 186
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 5e-14
Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 25/148 (16%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ RG+G +A F G VV E+LK GG+
Sbjct: 221 AARGIGATIAEVFARDGATVVAIDVDGA---------AEDLKRVADKVGGT--------- 262
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFG-SIDIWINNAG-TNKGFKPLLQFTNEEIEQIVST 137
+ DV V K++ G +DI +NNAG T L + + +++
Sbjct: 263 --ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKL--LANMDEKRWDAVIAV 318
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNM 165
NL+ T + +GG + +
Sbjct: 319 NLLAPQRLTEGLVGNGTIG-EGGRVIGL 345
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 2e-11
Identities = 46/274 (16%), Positives = 79/274 (28%), Gaps = 97/274 (35%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+G+G + ++ +G VV+ R V +L+ + H
Sbjct: 20 GNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----------------NHEN 63
Query: 80 VAGIACDVCEPAD-VQKLSNFAVNEFGSIDIWINNAG----------------------- 115
V DV +P + L++F FG +DI +NNAG
Sbjct: 64 VVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSE 123
Query: 116 ------TNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG---------- 159
+ L+ T E E+ + N G T + +++
Sbjct: 124 ELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTG 183
Query: 160 --GHIFNMDGAGSGGSSTPLT-----------------------------AVYGSTKCGL 188
++ N G LT A Y ++K L
Sbjct: 184 SLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACL 243
Query: 189 ----RQLQASLFKESKRSKVGVHTASPGMVLTDL 218
R L + K V+ PG+V T++
Sbjct: 244 NAYTRVLANKI------PKFQVNCVCPGLVKTEM 271
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 8e-11
Identities = 62/350 (17%), Positives = 98/350 (28%), Gaps = 126/350 (36%)
Query: 34 LSGDRVVVASRSSESVRMTVTELEENLKE----------GMMAAGGSSKKNLVHAKVAGI 83
L D V A + ++ +L + L E G+ GS K +
Sbjct: 119 LYNDNQVFAKYNVSRLQP-YLKLRQALLELRPAKNVLIDGV---LGSGKTWV-------- 166
Query: 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSI 143
A DVC VQ +F + F W+N N +E +
Sbjct: 167 ALDVCLSYKVQCKMDFKI--F-----WLNLKNCNS--------PETVLEMLQK------- 204
Query: 144 LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSK 203
L + D N S+ L S + LR+L S K +
Sbjct: 205 LLYQ------IDP-------NWTSRSDHSSNIKLR--IHSIQAELRRLLKS--KPYENCL 247
Query: 204 VGVHTASPGMVLTDLLLSGSTIQNKQ---MFNIICE-LPET----VARTLVPRIRVVKGS 255
+ VL + +QN + FN+ C+ L T V L
Sbjct: 248 L---------VLLN-------VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 256 GKAINYLTPPRILLALVTAWLRRGRWFDDQGR----------ALYAAE----ADRIRNW- 300
LTP + +L+ +L D R ++ A NW
Sbjct: 292 DHHSMTLTPDE-VKSLLLKYL--DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348
Query: 301 --------------------AENRARFSFTDAMEMYTENTWVSVFSLSVV 330
AE R F D + ++ + + LS++
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMF---DRLSVFPPSAHIPTILLSLI 395
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-06
Identities = 41/289 (14%), Positives = 82/289 (28%), Gaps = 76/289 (26%)
Query: 126 FTNEEIEQIV-------STNLVGSILCTREAMRVMR-----DQPKGGHIFNMDGAGSGGS 173
+ EEI+ I+ T + L +++ V + + + +
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105
Query: 174 STPLTAVYGSTKCGL-------------R-----QLQASLFKESKRSKVGVHTASPGM-- 213
S T +Y + L R +L+ +L + V + G+
Sbjct: 106 SMM-TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID----GVLG 160
Query: 214 ----VLTDLLLSGSTIQNKQMFNII------CELPETVARTLVPRIRVVKGSGKA-INYL 262
+ + +Q K F I C PETV L + + + + ++
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220
Query: 263 TPPRILLALVTAWLRR---GR------------W-------FDDQGRAL----YAAEADR 296
+ ++ + + A LRR + F+ + L + D
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF 280
Query: 297 IRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFP 345
+ A S T + S+ + C L T P
Sbjct: 281 LS--AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-11
Identities = 27/227 (11%), Positives = 52/227 (22%), Gaps = 69/227 (30%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G A + +G ++V
Sbjct: 9 CATGIGAATRKVLEAAGHQIVGIDIRD--------------------------------- 35
Query: 80 VAGIACDVCEPADVQK-LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
A + D+ ++ +++ +D + AG K L +VS N
Sbjct: 36 -AEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL--------GNVVSVN 86
Query: 139 LVGSILCTREAMRVMRDQPKG--------------------------GHIFNMDGAGSGG 172
G+ + ++ + G
Sbjct: 87 YFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHA 146
Query: 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219
Y +K L + V ++T +PG T LL
Sbjct: 147 GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL 193
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 25/115 (21%), Positives = 38/115 (33%), Gaps = 35/115 (30%)
Query: 23 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82
GLG ARE G V++A R + + +V
Sbjct: 27 GLGAVTARELARRGATVIMAVRDTRKGEAAARTMA--------------------GQVEV 66
Query: 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAG--------TNKGFKPLLQF-TN 128
D+ + + V++ + D+ INNAG T GF+ Q TN
Sbjct: 67 RELDLQDLSSVRR----FADGVSGADVLINNAGIMAVPYALTVDGFE--SQIGTN 115
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 347 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.98 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.98 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.97 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.97 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.97 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.96 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.96 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.96 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.96 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.96 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.95 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.94 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.92 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.91 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.9 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.9 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.89 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.89 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.88 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.88 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.87 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.87 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.87 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.86 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.86 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.86 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.86 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.86 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.86 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.85 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.84 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.84 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.84 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.83 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.83 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.83 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.83 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.83 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.83 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.83 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.83 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.82 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.82 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.82 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.81 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.81 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.81 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.81 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.81 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.81 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.81 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.8 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.8 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.8 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.8 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.8 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.8 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.8 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.78 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.78 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.78 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.78 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.78 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.78 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.78 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.77 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.77 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.77 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.76 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.76 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.75 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.75 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.75 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.72 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.72 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.71 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.71 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.71 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.71 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.7 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.7 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.7 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.69 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.67 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.66 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.66 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.65 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.64 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.63 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.63 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.62 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.62 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.6 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.59 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.59 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.59 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.59 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.54 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.46 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.45 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.43 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.39 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.32 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.09 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.06 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 99.04 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.86 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.84 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.83 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.67 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.65 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.63 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.62 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.6 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.54 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.52 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.46 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.4 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.38 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.36 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.35 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.33 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.33 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.33 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.31 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.28 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.28 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.25 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.23 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.2 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.12 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.12 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.09 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.09 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.06 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.06 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.04 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.02 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.01 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.98 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.93 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.9 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.89 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.88 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.88 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.84 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.83 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.81 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.78 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.78 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.76 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.74 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.72 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.7 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.7 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.66 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.66 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.63 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.62 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.61 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.6 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.59 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.58 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.56 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.54 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.51 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.49 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.48 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.47 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.46 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.45 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.39 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.35 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.35 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.32 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.31 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.31 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.3 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.28 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.28 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.27 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 97.25 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.23 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.22 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.2 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.15 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 97.15 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 97.14 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.14 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.13 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 97.1 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 97.09 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.04 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 97.04 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.02 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.01 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 97.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.99 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.98 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.98 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 96.96 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.95 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.95 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 96.95 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.94 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.92 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.9 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.9 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.89 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.87 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.86 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.82 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.79 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.77 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.77 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.74 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.73 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.72 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.69 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.69 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.67 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.67 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.64 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.62 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.62 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.61 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.6 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.58 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.55 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.54 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.53 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 96.49 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.44 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.4 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.39 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.37 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.34 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.33 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.3 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.24 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.21 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 96.19 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 96.17 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.16 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 96.11 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.11 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.1 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.09 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.07 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.06 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.03 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.03 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.02 | |
| 1obb_A | 480 | Maltase, alpha-glucosidase; glycosidase, sulfinic | 95.99 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 95.99 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 95.92 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 95.89 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 95.83 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 95.8 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 95.75 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 95.73 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 95.73 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 95.71 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 95.69 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 95.68 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 95.68 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 95.61 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.59 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 95.52 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 95.52 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 95.51 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 95.51 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 95.42 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 95.41 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 95.32 | |
| 1s6y_A | 450 | 6-phospho-beta-glucosidase; hydrolase, structural | 95.29 | |
| 3mog_A | 483 | Probable 3-hydroxybutyryl-COA dehydrogenase; struc | 95.29 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 95.29 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.26 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 95.24 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 95.22 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 95.19 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 95.18 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 95.15 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 95.08 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 95.05 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-53 Score=382.87 Aligned_cols=246 Identities=23% Similarity=0.305 Sum_probs=217.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++ .+.++.++++|++|
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~-----------------~g~~~~~~~~Dvt~ 67 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG-----------------MGKEVLGVKADVSK 67 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCC
Confidence 4689999999999999999999999999999999999999999999977 56789999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++++.++||+||+||||||+..+..++.+.++|+|++++++|+.|+|+++|+++|+|+++ ++|+|||+||.
T Consensus 68 ~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~- 145 (254)
T 4fn4_A 68 KKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNTASI- 145 (254)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEech-
Confidence 9999999999999999999999999987645789999999999999999999999999999999987 58999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH--HHHhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA--RTLVP 247 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a--~~~~~ 247 (347)
++..+.|+..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|+|............ +... ..+++
T Consensus 146 ~g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~--------~~~~~~~~~~~ 217 (254)
T 4fn4_A 146 AGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGM--------RTLTKLMSLSS 217 (254)
T ss_dssp GGTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHH--------HHHHHHHTTCC
T ss_pred hhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHH--------HHHHhcCCCCC
Confidence 7888999999999999999999999999999999999999999999998654432211111 1111 12457
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
|+..|+|++.++.||+|+...+++++.+..+|+|.
T Consensus 218 R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t 252 (254)
T 4fn4_A 218 RLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT 252 (254)
T ss_dssp CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence 78888999999999999999888888888888763
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-53 Score=381.59 Aligned_cols=245 Identities=24% Similarity=0.282 Sum_probs=220.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++ .+.++.++++|++|+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~-----------------~g~~~~~~~~Dv~~~ 70 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR-----------------KGYDAHGVAFDVTDE 70 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-----------------TTCCEEECCCCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeCCCH
Confidence 579999999999999999999999999999999999999999999877 456889999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||+||+||||||+.. ..++.+.++|+|++++++|+.|+|+++|+++|+|.+++++|+|||+||. +
T Consensus 71 ~~v~~~~~~~~~~~G~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~-~ 148 (255)
T 4g81_D 71 LAIEAAFSKLDAEGIHVDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL-T 148 (255)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh-h
Confidence 9999999999999999999999999987 5899999999999999999999999999999999876568999999998 7
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+...|++||+|+.+|+|+||.||+++|||||+|+||+|+|+|....... +.. ......+.+++|+.
T Consensus 149 ~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~------~~~~~~~~Pl~R~g 220 (255)
T 4g81_D 149 SQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED--KQF------DSWVKSSTPSQRWG 220 (255)
T ss_dssp GTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC--HHH------HHHHHHHSTTCSCB
T ss_pred hcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC--HHH------HHHHHhCCCCCCCc
Confidence 8889999999999999999999999999999999999999999999986432211 110 01223455788999
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++..+.||+++...+++++.+..||+|.
T Consensus 221 ~pediA~~v~fL~S~~a~~iTG~~i~VDGG~~ 252 (255)
T 4g81_D 221 RPEELIGTAIFLSSKASDYINGQIIYVDGGWL 252 (255)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHhCchhCCCcCCEEEECCCeE
Confidence 99999999999999999888888888888874
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-51 Score=372.10 Aligned_cols=244 Identities=22% Similarity=0.314 Sum_probs=207.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++|||||++|||+++|+.|+++|++|++++|++++++++++++ +.++..+++|++|
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~--------------------g~~~~~~~~Dv~~ 86 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI--------------------GGGAVGIQADSAN 86 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTCEEEECCTTC
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------------------CCCeEEEEecCCC
Confidence 45799999999999999999999999999999999999988877765 3467889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.|+|+++|+++|+|++ +|+|||++|.
T Consensus 87 ~~~v~~~~~~~~~~~G~iDiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~- 161 (273)
T 4fgs_A 87 LAELDRLYEKVKAEAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGST- 161 (273)
T ss_dssp HHHHHHHHHHHHHHHSCEEEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCG-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeeh-
Confidence 99999999999999999999999999977 689999999999999999999999999999999964 5899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.|+..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|++............... ..+...+.+++|+
T Consensus 162 ~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~---~~~~~~~~PlgR~ 238 (273)
T 4fgs_A 162 AGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGL---LNALAAQVPMGRV 238 (273)
T ss_dssp GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHH---HHHHHHHSTTSSC
T ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHH---HHHHHhcCCCCCC
Confidence 7888999999999999999999999999999999999999999999998765432211110000 1122345578889
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|+|++.++.||+|+...+++++.+..||++
T Consensus 239 g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 239 GRAEEVAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred cCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence 99999999999999999988877777777765
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-51 Score=363.86 Aligned_cols=238 Identities=17% Similarity=0.216 Sum_probs=206.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|+.+ ++..+++++ .+.++..+.+|++|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~-----------------~g~~~~~~~~Dv~d~ 68 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAK-----------------DGGNASALLIDFADP 68 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHH-----------------TTCCEEEEECCTTST
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHH-----------------hCCcEEEEEccCCCH
Confidence 5799999999999999999999999999999999865 345566655 467889999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++ +|+||+||||||+.. ..++.+.++|+|++++++|+.|+|+++|+++|+|++++++|+|||+||. +
T Consensus 69 ~~v~~~~~-----~g~iDiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~-~ 141 (247)
T 4hp8_A 69 LAAKDSFT-----DAGFDILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL-L 141 (247)
T ss_dssp TTTTTSST-----TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-G
T ss_pred HHHHHHHH-----hCCCCEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEech-h
Confidence 99887663 589999999999987 5899999999999999999999999999999999887568999999998 7
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|+|.......... ......+.+++|+.
T Consensus 142 ~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~--------~~~~~~~~PlgR~g 213 (247)
T 4hp8_A 142 SFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAAR--------NKAILERIPAGRWG 213 (247)
T ss_dssp GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHH--------HHHHHTTCTTSSCB
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHH--------HHHHHhCCCCCCCc
Confidence 8889999999999999999999999999999999999999999999986432211100 01122345678889
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++..+.||+|+...++++..+..||+|.
T Consensus 214 ~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~~ 245 (247)
T 4hp8_A 214 HSEDIAGAAVFLSSAAADYVHGAILNVDGGWL 245 (247)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECcccc
Confidence 99999999999999999899999988888874
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-50 Score=357.91 Aligned_cols=231 Identities=20% Similarity=0.290 Sum_probs=196.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|+.+++++. ...++..+.+|++|+
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-----------------------~~~~~~~~~~Dv~~~ 66 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-----------------------RHPRIRREELDITDS 66 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-----------------------CCTTEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-----------------------hcCCeEEEEecCCCH
Confidence 479999999999999999999999999999999998765321 335788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++ ++|+||+||||||+. .++.+.+.++|++++++|+.|+|+++|+++|+|+++ +|+|||+||. +
T Consensus 67 ~~v~~~~~----~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~-~ 136 (242)
T 4b79_A 67 QRLQRLFE----ALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASM-Y 136 (242)
T ss_dssp HHHHHHHH----HCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCG-G
T ss_pred HHHHHHHH----hcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeec-c
Confidence 99988764 579999999999984 567899999999999999999999999999999864 6999999998 7
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+...|++||+|+.+|+|+||.||+++|||||+|+||+|+|||........ +. ..+...+.+++|+.
T Consensus 137 ~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~-~~-------~~~~~~~~PlgR~g 208 (242)
T 4b79_A 137 STFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADV-EA-------TRRIMQRTPLARWG 208 (242)
T ss_dssp GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCH-HH-------HHHHHHTCTTCSCB
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCH-HH-------HHHHHhcCCCCCCc
Confidence 88899999999999999999999999999999999999999999999875433211 10 01223345678889
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++..+.||+|+...+++++.+..||+|.
T Consensus 209 ~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~l 240 (242)
T 4b79_A 209 EAPEVASAAAFLCGPGASFVTGAVLAVDGGYL 240 (242)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHhCchhcCccCceEEECccHh
Confidence 99999999999999999888888888888874
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=359.34 Aligned_cols=246 Identities=16% Similarity=0.166 Sum_probs=204.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++|||||++|||+++|+.|+++|++|++++|+.++.+ ..+++.+ .+.++.++++|++|
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~-----------------~~~~~~~~~~Dv~~ 66 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQ-----------------RQPRATYLPVELQD 66 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHH-----------------HCTTCEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHh-----------------cCCCEEEEEeecCC
Confidence 35799999999999999999999999999999999988754 4455544 34678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++++.++||+||+||||||+.. ....+.+.|+|++++++|+.++|+++|+++|+|+++ +|+|||+||.
T Consensus 67 ~~~v~~~v~~~~~~~G~iDiLVNnAGi~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~- 141 (258)
T 4gkb_A 67 DAQCRDAVAQTIATFGRLDGLVNNAGVND--GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSK- 141 (258)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC--CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCT-
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCC--CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeeh-
Confidence 99999999999999999999999999865 344578999999999999999999999999999864 6899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh-hh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV-PR 248 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~-~~ 248 (347)
++..+.|+...|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|............ ....+...+.++ +|
T Consensus 142 ~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~----~~~~~~~~~~plg~R 217 (258)
T 4gkb_A 142 TAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPE----AKLAEIAAKVPLGRR 217 (258)
T ss_dssp HHHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---------------CHHHHHHTTCTTTTS
T ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChH----HHHHHHHhcCCCCCC
Confidence 6788899999999999999999999999999999999999999999999754332111000 000111223344 47
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+..|+|++..+.||+|+...+++++.+..||+|.
T Consensus 218 ~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T 251 (258)
T 4gkb_A 218 FTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYT 251 (258)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CcCHHHHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence 8888999999999999999888888888888874
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-49 Score=351.62 Aligned_cols=229 Identities=20% Similarity=0.229 Sum_probs=200.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.|+||||||++|||+++|+.|+++|++|++++|+++++++..+ ...++.++++|++|++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---------------------~~~~~~~~~~Dv~~~~ 60 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---------------------ERPNLFYFHGDVADPL 60 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---------------------TCTTEEEEECCTTSHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------------------hcCCEEEEEecCCCHH
Confidence 4899999999999999999999999999999999887655433 2346788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.|+|+++|+++|+|+++ +|+|||+||. ++
T Consensus 61 ~v~~~v~~~~~~~g~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~-~~ 136 (247)
T 3ged_A 61 TLKKFVEYAMEKLQRIDVLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIAST-RA 136 (247)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCG-GG
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeec-cc
Confidence 999999999999999999999999987 5899999999999999999999999999999999875 5899999998 78
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.|+..+|++||+|+.+|+|+||.||++ |||||+|+||+|+|++..+. ..+...+.+++|+..
T Consensus 137 ~~~~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~--------------~~~~~~~~Pl~R~g~ 201 (247)
T 3ged_A 137 FQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEF--------------TQEDCAAIPAGKVGT 201 (247)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---C--------------CHHHHHTSTTSSCBC
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH--------------HHHHHhcCCCCCCcC
Confidence 889999999999999999999999999997 99999999999999975332 233444566788888
Q ss_pred ccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 252 VKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
|+|++.++.||+++. +++++.+..+|++.
T Consensus 202 pediA~~v~fL~s~~--~iTG~~i~VDGG~s 230 (247)
T 3ged_A 202 PKDISNMVLFLCQQD--FITGETIIVDGGMS 230 (247)
T ss_dssp HHHHHHHHHHHHHCS--SCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHHhCC--CCCCCeEEECcCHH
Confidence 888888889999753 56777777777664
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=353.44 Aligned_cols=240 Identities=17% Similarity=0.178 Sum_probs=201.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++|||||++|||+++|+.|+++|++|++++|+.++ ...+...+++|++|
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~---------------------------~~~~~~~~~~Dv~~ 61 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE---------------------------GLPEELFVEADLTT 61 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT---------------------------TSCTTTEEECCTTS
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh---------------------------CCCcEEEEEcCCCC
Confidence 358999999999999999999999999999999997642 11234578999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++++++++++.++||+||+||||||+... ..++.+.+.|+|++++++|+.++++++|+++|+|+++ ++|+|||+||.
T Consensus 62 ~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Iv~isS~ 140 (261)
T 4h15_A 62 KEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-GSGVVVHVTSI 140 (261)
T ss_dssp HHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-CCceEEEEEeh
Confidence 999999999999999999999999998642 3578999999999999999999999999999999987 58999999998
Q ss_pred CCCCCCCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH-------
Q 019009 169 GSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET------- 240 (347)
Q Consensus 169 ~~~~~~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~------- 240 (347)
++..+.| +...|++||+|+.+|+|+|+.|++++|||||+|+||+|+|++.........+. ...+++.
T Consensus 141 -~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 215 (261)
T 4h15_A 141 -QRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQ----AGTDLEGGKKIIMD 215 (261)
T ss_dssp -GGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHH----TTCCHHHHHHHHHH
T ss_pred -hhccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHh----hccchhhHHHHHHH
Confidence 5666665 67899999999999999999999999999999999999999864432111111 0111111
Q ss_pred -HHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 241 -VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 241 -~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
..+.+++|+..|+|++..+.||+|+...+++++.+..+|++.
T Consensus 216 ~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v 258 (261)
T 4h15_A 216 GLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGTV 258 (261)
T ss_dssp HTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred HhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence 122356788889999999999999999888888888888774
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-47 Score=343.61 Aligned_cols=244 Identities=16% Similarity=0.070 Sum_probs=210.9
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||++ |||+++|+.|+++|++|++++|+++.++++.+++++. .+.++.++++|++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dv~ 68 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL----------------NQPEAHLYQIDVQ 68 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG----------------TCSSCEEEECCTT
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------CCCcEEEEEccCC
Confidence 479999999865 9999999999999999999999999988887777652 2357889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|+++++++++++.++||+||+||||||+... ..++.+.+.|+|+..+++|+.+++.++++++|+|+ ++|+|||+
T Consensus 69 ~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~G~IVni 145 (256)
T 4fs3_A 69 SDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP---EGGSIVAT 145 (256)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT---TCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCEEEEE
Confidence 9999999999999999999999999998642 24567889999999999999999999999998875 36999999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.|+...|++||+|+.+|+|+||.||+++|||||+|+||+|+|++........ .. ..+...+.+
T Consensus 146 sS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~------~~~~~~~~P 216 (256)
T 4fs3_A 146 TYL-GGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFN--TI------LKEIKERAP 216 (256)
T ss_dssp ECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH--HH------HHHHHHHST
T ss_pred ecc-ccccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCH--HH------HHHHHhcCC
Confidence 998 788899999999999999999999999999999999999999999999875443211 11 122334556
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
++|+..|+|++.++.||+|+...++++..+..||+|.
T Consensus 217 l~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~ 253 (256)
T 4fs3_A 217 LKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFH 253 (256)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHH
Confidence 8888899999999999999999888888888888773
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=326.21 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=208.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+|++|||||++|||+++|++|+++|++|+++ +|+.+++++..+++++ .+.++.++.+|++
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~ 64 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-----------------LGVKVLVVKANVG 64 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-----------------TTCCEEEEECCTT
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence 357999999999999999999999999999997 8999988888888765 4567899999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~ 142 (258)
T 3oid_A 65 QPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSL 142 (258)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECch
Confidence 999999999999999999999999999876 5888999999999999999999999999999999987 57999999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ .. ........++++
T Consensus 143 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~------~~~~~~~~p~~r 213 (258)
T 3oid_A 143 -GSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRE--DL------LEDARQNTPAGR 213 (258)
T ss_dssp -GGTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHH--HH------HHHHHHHCTTSS
T ss_pred -hhCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCH--HH------HHHHHhcCCCCC
Confidence 678888999999999999999999999999999999999999999999875432210 00 011122334566
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+..|++++..+.||+++...++++..+..+|++.
T Consensus 214 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~ 247 (258)
T 3oid_A 214 MVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRS 247 (258)
T ss_dssp CBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCcccCCccCCEEEECCCcc
Confidence 6777788888889999887666666666666553
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=328.18 Aligned_cols=248 Identities=17% Similarity=0.214 Sum_probs=209.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+.++.++.+|++|.
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dv~~~ 71 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF---------------PGARLFASVCDVLDA 71 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---------------CCceEEEEeCCCCCH
Confidence 46999999999999999999999999999999999999999888887632 223588999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 72 ~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 148 (265)
T 3lf2_A 72 LQVRAFAEACERTLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-ADAAIVCVNSL-L 148 (265)
T ss_dssp HHHHHHHHHHHHHHCSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTEEEEEEEEG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCeEEEEECCc-c
Confidence 9999999999999999999999999976 5889999999999999999999999999999999887 58999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHH----HHHH---
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE----TVAR--- 243 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe----~~a~--- 243 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........... ...++ ...+
T Consensus 149 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 223 (265)
T 3lf2_A 149 ASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREER-----ELDWAQWTAQLARNKQ 223 (265)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC-----------CHHHHHHHHHHHTT
T ss_pred cCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhh-----ccCHHHHHHHHhhccC
Confidence 88888999999999999999999999999999999999999999999864322110000 00111 1222
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+++++..|++++..+.||+++...++++..+..+|++
T Consensus 224 ~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 261 (265)
T 3lf2_A 224 IPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL 261 (265)
T ss_dssp CTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred CCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence 35566778888888889999988867767666666655
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=326.95 Aligned_cols=243 Identities=21% Similarity=0.261 Sum_probs=209.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d~ 87 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN-----------------VGHDAEAVAFDVTSE 87 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-----------------TTCCEEECCCCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcCCCCH
Confidence 479999999999999999999999999999999999999999888876 456788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||. +
T Consensus 88 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iV~isS~-~ 164 (271)
T 4ibo_A 88 SEIIEAFARLDEQGIDVDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-GYGKIVNIGSL-T 164 (271)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccH-H
Confidence 9999999999999999999999999977 5788999999999999999999999999999999887 47999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... ... ........+++++.
T Consensus 165 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~------~~~~~~~~p~~r~~ 236 (271)
T 4ibo_A 165 SELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--PEF------DAWVKARTPAKRWG 236 (271)
T ss_dssp GTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--HHH------HHHHHHHSTTCSCB
T ss_pred hCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--HHH------HHHHHhcCCCCCCc
Confidence 7888899999999999999999999999999999999999999999985432110 000 01122334567788
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..+|++
T Consensus 237 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 267 (271)
T 4ibo_A 237 KPQELVGTAVFLSASASDYVNGQIIYVDGGM 267 (271)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCccccCCCCcEEEECCCe
Confidence 8999999999999988766666655555544
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=324.02 Aligned_cols=241 Identities=22% Similarity=0.326 Sum_probs=202.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++ .+.++.++.+|++|.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ-----------------AGGKAIGLECNVTDE 73 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEECCCCCH
Confidence 469999999999999999999999999999999999999988888876 456789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++ +.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 74 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 149 (256)
T 3gaf_A 74 QHREAVIKAALDQFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSM-A 149 (256)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCH-H
Confidence 9999999999999999999999999976 3666 89999999999999999999999999999987 57999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......... .......+++++.
T Consensus 150 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---------~~~~~~~p~~r~~ 220 (256)
T 3gaf_A 150 GENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIE---------RAMLKHTPLGRLG 220 (256)
T ss_dssp GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHH---------HHHHTTCTTSSCB
T ss_pred HcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHH---------HHHHhcCCCCCCC
Confidence 7888899999999999999999999999999999999999999999986432211000 0001122345556
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..+|++
T Consensus 221 ~~~dva~~~~~L~s~~~~~itG~~i~vdgG~ 251 (256)
T 3gaf_A 221 EAQDIANAALFLCSPAAAWISGQVLTVSGGG 251 (256)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CHHHHHHHHHHHcCCcccCccCCEEEECCCc
Confidence 6677777777888887755555555555544
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=328.13 Aligned_cols=245 Identities=22% Similarity=0.310 Sum_probs=206.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. .+.++.++.+|++|.
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~~~ 82 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ----------------FGTDVHTVAIDLAEP 82 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCTTST
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCcEEEEEecCCCH
Confidence 4699999999999999999999999999999999999999888888653 245789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++++.+|+||++||. +
T Consensus 83 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~-~ 160 (266)
T 4egf_A 83 DAPAELARRAAEAFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASA-A 160 (266)
T ss_dssp THHHHHHHHHHHHHTSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcch-h
Confidence 9999999999999999999999999987 4788999999999999999999999999999999887447899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ ... .....+.+++++.
T Consensus 161 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~-------~~~~~~~p~~r~~ 232 (266)
T 4egf_A 161 ALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDE-AKS-------APMIARIPLGRFA 232 (266)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSH-HHH-------HHHHTTCTTSSCB
T ss_pred hccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccCh-HHH-------HHHHhcCCCCCCc
Confidence 78888999999999999999999999999999999999999999999864321110 000 0111222345566
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..+|++
T Consensus 233 ~p~dva~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 4egf_A 233 VPHEVSDAVVWLASDAASMINGVDIPVDGGY 263 (266)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhcCccCcEEEECCCc
Confidence 6777777778898887766666666555554
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=326.42 Aligned_cols=249 Identities=18% Similarity=0.243 Sum_probs=203.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d~ 89 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG-----------------AGGQAIALEADVSDE 89 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCH
Confidence 469999999999999999999999999999999999999888888754 456789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 90 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~-~ 167 (283)
T 3v8b_A 90 LQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSI-N 167 (283)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS-B
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcCh-h
Confidence 999999999999999999999999986534788999999999999999999999999999999887 57999999997 5
Q ss_pred CCC--CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh--
Q 019009 171 GGS--STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV-- 246 (347)
Q Consensus 171 ~~~--~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~-- 246 (347)
+.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++................. .. ....++
T Consensus 168 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~--~~~~p~~~ 244 (283)
T 3v8b_A 168 GTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVE-WP--KGQVPITD 244 (283)
T ss_dssp TTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCB-CT--TCSCGGGT
T ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhh-hh--hhcCcccc
Confidence 655 67888999999999999999999999999999999999999999875432111110000000 00 001122
Q ss_pred hhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 247 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++..|++++.++.||+++...++++..+..+|++
T Consensus 245 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 245 GQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp TCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred CCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence 45556666677777898888766666666555543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-44 Score=326.47 Aligned_cols=247 Identities=22% Similarity=0.215 Sum_probs=204.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+ .+.++.++.+|++|.
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~ 69 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG-----------------GGGEAAALAGDVGDE 69 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT-----------------TTCCEEECCCCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEECCCCCH
Confidence 469999999999999999999999999999999999999888887754 356788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||. .
T Consensus 70 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 147 (280)
T 3tox_A 70 ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSF-V 147 (280)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCS-B
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCh-h
Confidence 999999999999999999999999987545788999999999999999999999999999999987 57999999997 4
Q ss_pred CC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 171 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 171 ~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
+. .+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++.............. ......+++++
T Consensus 148 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~------~~~~~~p~~r~ 221 (280)
T 3tox_A 148 GHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRG------FVEGLHALKRI 221 (280)
T ss_dssp TTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHH------HHHTTSTTSSC
T ss_pred hCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHH------HHhccCccCCC
Confidence 54 678889999999999999999999999999999999999999999864421110000000 00011224455
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
..|++++..+.||+++...++++..+..+|++.
T Consensus 222 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~ 254 (280)
T 3tox_A 222 ARPEEIAEAALYLASDGASFVTGAALLADGGAS 254 (280)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cCHHHHHHHHHHHhCccccCCcCcEEEECCCcc
Confidence 667777777778988877666666666666553
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=323.27 Aligned_cols=242 Identities=23% Similarity=0.302 Sum_probs=203.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++. ...++.++.+|++|.
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----------------GSGKVIGVQTDVSDR 72 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------SSSCEEEEECCTTSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------CCCcEEEEEcCCCCH
Confidence 4699999999999999999999999999999999999999888888652 225788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|+++ +.|+||++||. +
T Consensus 73 ~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~-~ 149 (262)
T 3pk0_A 73 AQCDALAGRAVEEFGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-GSGRVVLTSSI-T 149 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-SSCEEEEECCS-B
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEech-h
Confidence 9999999999999999999999999977 5888999999999999999999999999999999887 47899999998 4
Q ss_pred CC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 171 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 171 ~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
+. .+.++...|++||+|+++|+++|+.|++++||+||+|+||+|.|++........... .....+++++
T Consensus 150 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~----------~~~~~p~~r~ 219 (262)
T 3pk0_A 150 GPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIAS----------MARSIPAGAL 219 (262)
T ss_dssp TTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHH----------HHTTSTTSSC
T ss_pred hccCCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHH----------HHhcCCCCCC
Confidence 54 778899999999999999999999999999999999999999999864332111000 1111234455
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 220 ~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~ 251 (262)
T 3pk0_A 220 GTPEDIGHLAAFLATKEAGYITGQAIAVDGGQ 251 (262)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred cCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence 66667777777898888766666666665554
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=321.72 Aligned_cols=238 Identities=24% Similarity=0.344 Sum_probs=198.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+++++++..+++. .+...+.+|++|.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--------------------DNGKGMALNVTNP 67 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------------------GGEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------------ccceEEEEeCCCH
Confidence 47999999999999999999999999999999999998877766653 2467889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||. +
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~-~ 144 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINVGSV-V 144 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH-H
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcch-h
Confidence 9999999999999999999999999987 4788999999999999999999999999999999876 57999999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......... ......+.+++.
T Consensus 145 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~----------~~~~~~p~~r~~ 214 (248)
T 3op4_A 145 GTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRT----------ATLAQVPAGRLG 214 (248)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHH----------HHHHTCTTCSCB
T ss_pred hcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHH----------HHHhcCCCCCCc
Confidence 7778889999999999999999999999999999999999999999986543211111 111222344555
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..+|++
T Consensus 215 ~p~dva~~v~~L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 215 DPREIASAVAFLASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence 6666666777888877655555555555543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=323.60 Aligned_cols=251 Identities=18% Similarity=0.203 Sum_probs=204.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----------------hhHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS----------------SESVRMTVTELEENLKEGMMAAGGSSKKN 74 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~----------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 74 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++..
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 73 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG---------------- 73 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT----------------
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh----------------
Confidence 46999999999999999999999999999999887 6666666666654
Q ss_pred ccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhH
Q 019009 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR 154 (347)
Q Consensus 75 ~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~ 154 (347)
.+.++.++.+|++|.++++++++++.+++|+||+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|+
T Consensus 74 -~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 152 (286)
T 3uve_A 74 -HNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMI 152 (286)
T ss_dssp -TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred -cCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999876434588999999999999999999999999999998
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhh-hh
Q 019009 155 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NI 233 (347)
Q Consensus 155 ~~~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~-~~ 233 (347)
+++++|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... ..+. ..
T Consensus 153 ~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~ 229 (286)
T 3uve_A 153 AGGRGGSIILTSSV-GGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF--KMFRPDL 229 (286)
T ss_dssp HHTSCEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHH--HHHCTTS
T ss_pred hCCCCcEEEEECch-hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchh--hhccccc
Confidence 86457899999998 68888899999999999999999999999999999999999999999986432110 0000 00
Q ss_pred ccCCHHHHHHHH--h----hhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 234 ICELPETVARTL--V----PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 234 ~~~~pe~~a~~~--~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
....+++..... . .++..|++++.++.||+++...++++..+..+|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~ 283 (286)
T 3uve_A 230 ENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS 283 (286)
T ss_dssp SSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence 111233332211 1 34456777888888999988766666666666654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-44 Score=326.65 Aligned_cols=252 Identities=17% Similarity=0.211 Sum_probs=197.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-------------ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-------------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-------------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 77 (347)
.||++|||||++|||+++|++|+++|++|++++| +.+++++..++++. .+
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 72 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA-----------------AN 72 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH-----------------TT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh-----------------cC
Confidence 4699999999999999999999999999999998 66777777777655 45
Q ss_pred ceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC
Q 019009 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP 157 (347)
Q Consensus 78 ~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~ 157 (347)
.++.++.+|++|.++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++
T Consensus 73 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 151 (277)
T 3tsc_A 73 RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG 151 (277)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999999987 47888999999999999999999999999999998874
Q ss_pred CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCC
Q 019009 158 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL 237 (347)
Q Consensus 158 ~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 237 (347)
.+|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...................
T Consensus 152 ~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 230 (277)
T 3tsc_A 152 RGGSIILISSA-AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQL 230 (277)
T ss_dssp SCEEEEEECCG-GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGG
T ss_pred CCCEEEEEccH-hhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHH
Confidence 47899999998 67888899999999999999999999999999999999999999999986431100000000000000
Q ss_pred HHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 238 PETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 238 pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+.....+-.++..|++++..+.||+++...++++..+..+|++
T Consensus 231 ~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 231 SHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp TTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 00000000012344555555566888877755555555555544
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=320.51 Aligned_cols=239 Identities=20% Similarity=0.262 Sum_probs=201.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~~ 64 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--------------------GKKARAIAADISDP 64 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------------------CTTEEECCCCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEEcCCCCH
Confidence 3699999999999999999999999999999999999887776654 24678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++..|+||++||. +
T Consensus 65 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~ 142 (247)
T 3rwb_A 65 GSVKALFAEIQALTGGIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASN-T 142 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCT-H
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECch-h
Confidence 9999999999999999999999999986 5788999999999999999999999999999999887447999999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH-HHhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR-TLVPRI 249 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~-~~~~~~ 249 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........... .... ..+++.
T Consensus 143 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~----------~~~~~~~~~r~ 212 (247)
T 3rwb_A 143 FFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFG----------FVEMLQAMKGK 212 (247)
T ss_dssp HHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHH----------HHHHHSSSCSC
T ss_pred hccCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHH----------HHhcccccCCC
Confidence 77788899999999999999999999999999999999999999999865432211111 1111 234455
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 213 ~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 213 GQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 56667777777898888766666666655554
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=323.47 Aligned_cols=248 Identities=18% Similarity=0.190 Sum_probs=206.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD-----------------TGRRALSVGTDITD 71 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence 3579999999999999999999999999999999999999998888876 45678999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|+++ +|+||++||.
T Consensus 72 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS~- 148 (264)
T 3ucx_A 72 DAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNSM- 148 (264)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECCG-
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECcc-
Confidence 9999999999999999999999999986446789999999999999999999999999999999875 4899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH-----H
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR-----T 244 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~-----~ 244 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++......... ......+++..+ .
T Consensus 149 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 224 (264)
T 3ucx_A 149 VVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQA----GKYGTSVEDIYNAAAAGS 224 (264)
T ss_dssp GGGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHH----HHTTCCHHHHHHHHHTTS
T ss_pred hhccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhh----hhcCCCHHHHHHHHhccC
Confidence 6778889999999999999999999999999999999999999999998643221100 000111222222 2
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++++..|++++..+.||+++...++++..+..+|++
T Consensus 225 p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 261 (264)
T 3ucx_A 225 DLKRLPTEDEVASAILFMASDLASGITGQALDVNCGE 261 (264)
T ss_dssp SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 3456667788888888999887755555555555543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=322.44 Aligned_cols=241 Identities=25% Similarity=0.352 Sum_probs=206.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+ .+.++.++.+|++|.
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~d~ 93 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG-----------------VGGKALPIRCDVTQP 93 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-----------------TTCCCEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCCCH
Confidence 469999999999999999999999999999999999999988888866 456788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|++++.+|+||++||. +
T Consensus 94 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~-~ 171 (276)
T 3r1i_A 94 DQVRGMLDQMTGELGGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASM-S 171 (276)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECch-H
Confidence 9999999999999999999999999987 5788899999999999999999999999999999887446999999987 4
Q ss_pred CCCCC--CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 171 GGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 171 ~~~~~--~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+..+. +....|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... . .......++++
T Consensus 172 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-~----------~~~~~~~p~~r 240 (276)
T 3r1i_A 172 GHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY-H----------ALWEPKIPLGR 240 (276)
T ss_dssp GTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG-H----------HHHGGGSTTSS
T ss_pred hcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH-H----------HHHHhcCCCCC
Confidence 44332 36789999999999999999999999999999999999999986433210 0 11112234567
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+..|++++..+.||+++...++++..+..+|++
T Consensus 241 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 241 MGRPEELTGLYLYLASAASSYMTGSDIVIDGGY 273 (276)
T ss_dssp CBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CcCHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence 788899999999999988766666666666655
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=321.82 Aligned_cols=245 Identities=21% Similarity=0.262 Sum_probs=200.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~ 67 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ-----------------FPGQILTVQMDVRNT 67 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----------------STTCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCH
Confidence 369999999999999999999999999999999999999888877754 346789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|.+++..|+||++||. .
T Consensus 68 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~ 145 (257)
T 3imf_A 68 DDIQKMIEQIDEKFGRIDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVAT-Y 145 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECch-h
Confidence 9999999999999999999999999876 5788999999999999999999999999999999655457999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhc-CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~-~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
+..+.++...|++||+|+++|+++|+.|++ ++||+||+|+||+|+|++.......... . ........+++++
T Consensus 146 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~-~------~~~~~~~~p~~r~ 218 (257)
T 3imf_A 146 AWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEE-M------AKRTIQSVPLGRL 218 (257)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------C-C------SHHHHTTSTTCSC
T ss_pred hccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHH-H------HHHHHhcCCCCCC
Confidence 778888999999999999999999999997 7799999999999999975432111000 0 0111112234555
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 219 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 250 (257)
T 3imf_A 219 GTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQ 250 (257)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred cCHHHHHHHHHHHcCchhcCccCCEEEECCCc
Confidence 66666777777888887655555555555544
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-43 Score=315.26 Aligned_cols=243 Identities=14% Similarity=0.181 Sum_probs=201.8
Q ss_pred CCCCCCCcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 019009 1 MYSDNDEHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80 (347)
Q Consensus 1 ~~~~~~~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (347)
|..+.......||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+. .+.++
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~ 64 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE----------------TGRQP 64 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HSCCC
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCCc
Confidence 33333333345799999999999999999999999999999999999999888888763 22367
Q ss_pred eEEecCC--CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC
Q 019009 81 AGIACDV--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK 158 (347)
Q Consensus 81 ~~~~~Dl--s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~ 158 (347)
.++.+|+ +|.++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|+++ +
T Consensus 65 ~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~ 143 (252)
T 3f1l_A 65 QWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-D 143 (252)
T ss_dssp EEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-S
T ss_pred eEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-C
Confidence 8899999 999999999999999999999999999986545788999999999999999999999999999999987 5
Q ss_pred CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCH
Q 019009 159 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 238 (347)
Q Consensus 159 ~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~p 238 (347)
.|+||++||. ++..+.++...|++||+|+++|+++|+.|+++. |+||+|+||+|+|++........ .
T Consensus 144 ~g~iv~isS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~----------~- 210 (252)
T 3f1l_A 144 AGSLVFTSSS-VGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTE----------D- 210 (252)
T ss_dssp SCEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTC----------C-
T ss_pred CCEEEEECCh-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCcc----------c-
Confidence 7999999998 678888999999999999999999999999887 99999999999999853321110 0
Q ss_pred HHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 239 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 239 e~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
..++..|++++..+.||+++...++++..+..+|+
T Consensus 211 -------~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG 245 (252)
T 3f1l_A 211 -------PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPG 245 (252)
T ss_dssp -------GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC
T ss_pred -------hhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCC
Confidence 12345566777777788888765555555444443
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=325.25 Aligned_cols=251 Identities=18% Similarity=0.178 Sum_probs=202.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 78 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++++ .+.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~ 89 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-----------------LGR 89 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-----------------TTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh-----------------cCC
Confidence 47999999999999999999999999999999987 6777777777765 456
Q ss_pred eeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC
Q 019009 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK 158 (347)
Q Consensus 79 ~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~ 158 (347)
++.++.+|++|.++++++++++.+++|+||+||||||+.....++.+.+.++|++++++|+.|++.++++++|+|.++++
T Consensus 90 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 169 (299)
T 3t7c_A 90 RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR 169 (299)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 89999999999999999999999999999999999998764345889999999999999999999999999999988755
Q ss_pred CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhh-ccCC
Q 019009 159 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICEL 237 (347)
Q Consensus 159 ~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~-~~~~ 237 (347)
.|+||++||. ++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++....... ..+... ....
T Consensus 170 ~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~ 246 (299)
T 3t7c_A 170 GGSIVFTSSI-GGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTY--RMFRPDLENPT 246 (299)
T ss_dssp CEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH--HHHCTTSSSCC
T ss_pred CcEEEEECCh-hhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchh--hhhhhhhccch
Confidence 7999999998 68888899999999999999999999999999999999999999999986432110 000000 0001
Q ss_pred HHHHHH--HH----hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 238 PETVAR--TL----VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 238 pe~~a~--~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.++... .. -.++..|++++.++.||+++...++++..+..+|++
T Consensus 247 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 296 (299)
T 3t7c_A 247 VEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA 296 (299)
T ss_dssp HHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence 111100 00 123456677777778999888766666666555554
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=325.93 Aligned_cols=191 Identities=24% Similarity=0.338 Sum_probs=176.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-------------ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-------------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-------------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 77 (347)
.||++|||||++|||+++|++|+++|++|++++| +.+++++..+++++ .+
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 76 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED-----------------QG 76 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT-----------------TT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh-----------------cC
Confidence 4699999999999999999999999999999998 67777777777654 45
Q ss_pred ceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC
Q 019009 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP 157 (347)
Q Consensus 78 ~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~ 157 (347)
.++.++.+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++
T Consensus 77 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 155 (280)
T 3pgx_A 77 RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAG 155 (280)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 67889999999999999999999999999999999999987 57889999999999999999999999999999998864
Q ss_pred CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 158 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 158 ~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.+|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus 156 ~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 217 (280)
T 3pgx_A 156 NGGSIVVVSSS-AGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE 217 (280)
T ss_dssp SCEEEEEECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred CCCEEEEEcch-hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc
Confidence 47999999998 688888999999999999999999999999999999999999999999864
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-44 Score=327.00 Aligned_cols=251 Identities=24% Similarity=0.282 Sum_probs=204.2
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.++..+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|
T Consensus 19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D 81 (279)
T 3sju_A 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA-----------------AGHDVDGSSCD 81 (279)
T ss_dssp ------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTCCEEEEECC
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEECC
Confidence 3456689999999999999999999999999999999999999988888865 45678999999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH--HhHcCCCCcEEEE
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMR--VMRDQPKGGHIFN 164 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp--~l~~~~~~g~Iv~ 164 (347)
++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++| .|+++ +.|+||+
T Consensus 82 v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-~~g~iV~ 159 (279)
T 3sju_A 82 VTSTDEVHAAVAAAVERFGPIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-GWGRIVN 159 (279)
T ss_dssp TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-TCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-CCcEEEE
Confidence 99999999999999999999999999999977 57889999999999999999999999999999 57765 4789999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH-
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR- 243 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~- 243 (347)
+||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++......... ......+++..+
T Consensus 160 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~~ 234 (279)
T 3sju_A 160 IAST-GGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYA----RHWGVTEQEVHER 234 (279)
T ss_dssp ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCC----SSSCCCHHHHHHH
T ss_pred ECCh-hhccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhh----hcccCChHHHHHH
Confidence 9998 6788889999999999999999999999999999999999999999998643211000 000001122211
Q ss_pred ----HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 ----TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+++++..|++++..+.||+++...++++..+..+|++
T Consensus 235 ~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 235 FNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp HHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred HHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 23455667788888888999988766666666555544
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=319.83 Aligned_cols=242 Identities=20% Similarity=0.326 Sum_probs=201.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++ .+.++..+.+|++|
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~d 88 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ-----------------AGLEGRGAVLNVND 88 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----------------HTCCCEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEEeCCC
Confidence 3479999999999999999999999999999999999999888888876 34578889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||.
T Consensus 89 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~- 165 (270)
T 3ftp_A 89 ATAVDALVESTLKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITSV- 165 (270)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECch-
Confidence 99999999999999999999999999977 4788899999999999999999999999999999877 57999999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++............ ....+++++
T Consensus 166 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~----------~~~~p~~r~ 235 (270)
T 3ftp_A 166 VGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTAL----------KTQIPLGRL 235 (270)
T ss_dssp HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHH----------HTTCTTCSC
T ss_pred hhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHH----------HhcCCCCCC
Confidence 6777888999999999999999999999999999999999999999998654321111110 011123444
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 236 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 267 (270)
T 3ftp_A 236 GSPEDIAHAVAFLASPQAGYITGTTLHVNGGM 267 (270)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCHHHHHHHHHHHhCCCcCCccCcEEEECCCc
Confidence 55566666666888777655555555554443
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=317.40 Aligned_cols=240 Identities=24% Similarity=0.366 Sum_probs=198.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++| +.+++++..+++++ .+.++.++.+|++|
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~d 65 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA-----------------KGVDSFAIQANVAD 65 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTSCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCC
Confidence 4699999999999999999999999999999877 55777777777766 45678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus 66 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~- 142 (246)
T 3osu_A 66 ADEVKAMIKEVVSQFGSLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSV- 142 (246)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcch-
Confidence 99999999999999999999999999977 4788899999999999999999999999999999876 57999999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||++.|++............ ....+++++
T Consensus 143 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~----------~~~~p~~r~ 212 (246)
T 3osu_A 143 VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQM----------LTQIPLARF 212 (246)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHH----------HTTCTTCSC
T ss_pred hhcCCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHH----------HhcCCCCCC
Confidence 5777888899999999999999999999999999999999999999998654322111111 111234455
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
..|++++..+.||+++...++++..+..+|+
T Consensus 213 ~~~~dva~~v~~l~s~~~~~itG~~i~vdgG 243 (246)
T 3osu_A 213 GQDTDIANTVAFLASDKAKYITGQTIHVNGG 243 (246)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 5566666667788887765544444444443
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-42 Score=310.88 Aligned_cols=222 Identities=24% Similarity=0.405 Sum_probs=185.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++ .+.++.++.+|++|.
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d~ 65 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD-----------------AGGTALAQVLDVTDR 65 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----------------TTCEEEEEECCTTCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCCH
Confidence 469999999999999999999999999999999999999998888876 456889999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 66 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~-~ 142 (264)
T 3tfo_A 66 HSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSI-G 142 (264)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCH-H
Confidence 9999999999999999999999999976 5889999999999999999999999999999999887 57999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh---hhhhccCCHHHHHHHHhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ---MFNIICELPETVARTLVP 247 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~---~~~~~~~~pe~~a~~~~~ 247 (347)
+..+.++...|++||+|+++|+++|+.|+ + ||+||+|+||+|+|++........... ........|+++|+.++.
T Consensus 143 ~~~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~ 220 (264)
T 3tfo_A 143 ALSVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQ 220 (264)
T ss_dssp GTCCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------CCCHHHHHHHHHH
T ss_pred HcccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHH
Confidence 78888999999999999999999999998 5 999999999999999875432211111 111123578999998887
Q ss_pred hhhhccc
Q 019009 248 RIRVVKG 254 (347)
Q Consensus 248 ~~~~~~~ 254 (347)
.+..+..
T Consensus 221 l~s~~~~ 227 (264)
T 3tfo_A 221 VIEAPQS 227 (264)
T ss_dssp HHHSCTT
T ss_pred HhcCCcc
Confidence 7665544
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=320.87 Aligned_cols=242 Identities=18% Similarity=0.168 Sum_probs=205.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+ .+.++.++.+|++|.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~ 94 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA-----------------SGGTAQELAGDLSEA 94 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH-----------------TTCCEEEEECCTTST
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEEecCCCH
Confidence 479999999999999999999999999999999999999888888866 456789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+. +++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 95 ~~~~~~~~~~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~-~ 170 (275)
T 4imr_A 95 GAGTDLIERAEAI-APVDILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-KWGRVVSIGSI-N 170 (275)
T ss_dssp THHHHHHHHHHHH-SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHh-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCH-H
Confidence 9999999999887 99999999999977 4788999999999999999999999999999999887 57999999998 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH-Hhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART-LVPRI 249 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~-~~~~~ 249 (347)
+..+.+....|++||+|+++|+++|+.|+++.||+||+|+||+|+|++........... ..+..... +++++
T Consensus 171 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-------~~~~~~~~~p~~r~ 243 (275)
T 4imr_A 171 QLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEG-------WDEYVRTLNWMGRA 243 (275)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHH-------HHHHHHHHSTTCSC
T ss_pred hCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHH-------HHHHHhhcCccCCC
Confidence 67777788889999999999999999999999999999999999999854321100000 01112222 46777
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
..|++++..+.||+++...++++..+..+|+
T Consensus 244 ~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 244 GRPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred cCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 8899999999999998876666666555554
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=322.68 Aligned_cols=245 Identities=21% Similarity=0.254 Sum_probs=205.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. .+.++.++.+|++|.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dv~~~ 89 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA----------------TGRRCLPLSMDVRAP 89 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCcEEEEEcCCCCH
Confidence 4799999999999999999999999999999999999998888887653 346789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||. +
T Consensus 90 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 166 (277)
T 4fc7_A 90 PAVMAAVDQALKEFGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNITAT-L 166 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCS-H
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECch-h
Confidence 9999999999999999999999999876 5788999999999999999999999999999999876 47899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|.|++............ .......+++++.
T Consensus 167 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~-------~~~~~~~p~~r~~ 239 (277)
T 4fc7_A 167 GNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASL-------STKVTASPLQRLG 239 (277)
T ss_dssp HHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHH-------HHHHHTSTTSSCB
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHH-------HHHhccCCCCCCc
Confidence 777888899999999999999999999999999999999999999986422111000000 1112233456667
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..+|++
T Consensus 240 ~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~ 270 (277)
T 4fc7_A 240 NKTEIAHSVLYLASPLASYVTGAVLVADGGA 270 (277)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred CHHHHHHHHHHHcCCccCCcCCCEEEECCCc
Confidence 7788888888999887766656555555543
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-42 Score=308.57 Aligned_cols=220 Identities=20% Similarity=0.204 Sum_probs=180.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++ .+.++.++.+|++|.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA-----------------AGGRIVARSLDARNE 68 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-----------------TTCEEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECcCCCH
Confidence 469999999999999999999999999999999999999999888876 456899999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++ |++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 69 ~~v~~~~~~~~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 144 (252)
T 3h7a_A 69 DEVTAFLNAADAH-APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGAT-A 144 (252)
T ss_dssp HHHHHHHHHHHHH-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEG-G
T ss_pred HHHHHHHHHHHhh-CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCH-H
Confidence 9999999999999 99999999999987 5888999999999999999999999999999999987 47999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEE-EEeeCCcccCcccccCcccchhh---hhhhccCCHHHHHHHHh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGV-HTASPGMVLTDLLLSGSTIQNKQ---MFNIICELPETVARTLV 246 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v-~~i~PG~v~T~~~~~~~~~~~~~---~~~~~~~~pe~~a~~~~ 246 (347)
+..+.++...|++||+|+++|+++|+.|+++.||+| |+|+||+|+|++........... ..+....+|+++|+.++
T Consensus 145 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~ 224 (252)
T 3h7a_A 145 SLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYW 224 (252)
T ss_dssp GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------CCHHHHHHHHH
T ss_pred HcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCccCCCHHHHHHHHH
Confidence 788889999999999999999999999999999999 99999999999876543221110 01112457888888777
Q ss_pred hhhhh
Q 019009 247 PRIRV 251 (347)
Q Consensus 247 ~~~~~ 251 (347)
..+..
T Consensus 225 ~l~s~ 229 (252)
T 3h7a_A 225 QLYQQ 229 (252)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 55543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=321.26 Aligned_cols=247 Identities=19% Similarity=0.246 Sum_probs=203.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++... .+.++.++.+|++|.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~Dv~~~ 75 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA--------------NGGAIRYEPTDITNE 75 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC--------------SSCEEEEEECCTTSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC--------------CCceEEEEeCCCCCH
Confidence 479999999999999999999999999999999999999988888865210 123788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|+++ ++|+||++||. +
T Consensus 76 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 153 (281)
T 3svt_A 76 DETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGISSI-A 153 (281)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCH-H
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCH-H
Confidence 999999999999999999999999984435788999999999999999999999999999999987 58999999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ . . ........++++..
T Consensus 154 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~-~------~~~~~~~~p~~r~~ 225 (281)
T 3svt_A 154 ASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESA-E-L------SSDYAMCTPLPRQG 225 (281)
T ss_dssp HHSCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH-H-H------HHHHHHHCSSSSCB
T ss_pred HcCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCH-H-H------HHHHHhcCCCCCCC
Confidence 77788888999999999999999999999999999999999999999864321100 0 0 01112223345566
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++.++.||+++...++++..+..+|++
T Consensus 226 ~~~dva~~~~~l~s~~~~~itG~~~~vdgG~ 256 (281)
T 3svt_A 226 EVEDVANMAMFLLSDAASFVTGQVINVDGGQ 256 (281)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCcccCCCCCCEEEeCCCh
Confidence 6777777777888887655555555555544
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=323.09 Aligned_cols=242 Identities=20% Similarity=0.265 Sum_probs=203.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. ...++.++.+|++|.
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~d~ 103 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----------------GAGNVIGVRLDVSDP 103 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS----------------SSSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----------------CCCcEEEEEEeCCCH
Confidence 4699999999999999999999999999999999999998888887542 125788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||. .
T Consensus 104 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~isS~-~ 180 (293)
T 3rih_A 104 GSCADAARTVVDAFGALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTSSI-T 180 (293)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEECCS-B
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEeCh-h
Confidence 9999999999999999999999999977 5788999999999999999999999999999999887 47899999998 4
Q ss_pred CC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 171 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 171 ~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
+. .+.++...|++||+|+++|+++|+.|++++||+||+|+||+|.|++.......... ......+++++
T Consensus 181 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~----------~~~~~~p~~r~ 250 (293)
T 3rih_A 181 GPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYIS----------GMARSIPMGML 250 (293)
T ss_dssp TTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHH----------HHHTTSTTSSC
T ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHH----------HHHhcCCCCCC
Confidence 53 78889999999999999999999999999999999999999999986433211100 01112234555
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 251 ~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~ 282 (293)
T 3rih_A 251 GSPVDIGHLAAFLATDEAGYITGQAIVVDGGQ 282 (293)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 66677777778999888766666666665554
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=318.36 Aligned_cols=245 Identities=22% Similarity=0.301 Sum_probs=204.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~d~ 87 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--------------------GCGAAACRVDVSDE 87 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--------------------CSSCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCcceEEEecCCCH
Confidence 4699999999999999999999999999999999998887766654 24678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 88 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~-~ 164 (277)
T 3gvc_A 88 QQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-GGGAIVNLSSL-A 164 (277)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcch-h
Confidence 9999999999999999999999999986 5788899999999999999999999999999999987 58999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++............ .....+.....+++++.
T Consensus 165 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~r~~ 241 (277)
T 3gvc_A 165 GQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGAL---GAGGARSMIARLQGRMA 241 (277)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHHSSCB
T ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhH---HHHhhhhhhhccccCCC
Confidence 888889999999999999999999999999999999999999999998543211000000 00112222244566777
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..+|++
T Consensus 242 ~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 272 (277)
T 3gvc_A 242 APEEMAGIVVFLLSDDASMITGTTQIADGGT 272 (277)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHcCCccCCccCcEEEECCcc
Confidence 7888888888999988766666666665554
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=320.40 Aligned_cols=248 Identities=25% Similarity=0.335 Sum_probs=198.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+. .+.++.++.+|++|
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dv~d 87 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL----------------SSGTVLHHPADMTK 87 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT----------------CSSCEEEECCCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc----------------cCCcEEEEeCCCCC
Confidence 3699999999999999999999999999999999 666777777776542 24678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||.
T Consensus 88 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~- 164 (281)
T 3v2h_A 88 PSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASA- 164 (281)
T ss_dssp HHHHHHHHHHHHHHTSSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCc-
Confidence 99999999999999999999999999977 5788899999999999999999999999999999887 57999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH------HH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV------AR 243 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~------a~ 243 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++............ ...+++. ..
T Consensus 165 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 240 (281)
T 3v2h_A 165 HGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTR----GITEEQVINEVMLKG 240 (281)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------------------------C
T ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhc----CCCHHHHHHHHHHhc
Confidence 6888889999999999999999999999999999999999999999998654322111000 0011111 11
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+++++..|++++..+.||+++...++++..+..+|+|
T Consensus 241 ~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 241 QPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp CTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred CCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 23455667777888888898887766666666666554
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-43 Score=319.47 Aligned_cols=243 Identities=22% Similarity=0.283 Sum_probs=188.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++| +.+++++..+++.. .+.++.++.+|++|
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~d 90 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG-----------------LGARVIFLRADLAD 90 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCC
Confidence 4699999999999999999999999999999995 77788888887765 45678999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vs 166 (347)
.++++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.|+++++++++|+|++++ ..|+||++|
T Consensus 91 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~is 170 (280)
T 4da9_A 91 LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINIT 170 (280)
T ss_dssp GGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEc
Confidence 99999999999999999999999999831 247888999999999999999999999999999998752 268999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH-HHH
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-RTL 245 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-~~~ 245 (347)
|. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........... ... ..+
T Consensus 171 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~----------~~~~~~p 239 (280)
T 4da9_A 171 SV-SAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGL----------IESGLVP 239 (280)
T ss_dssp CC--------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------
T ss_pred ch-hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHH----------HhhcCCC
Confidence 98 677888899999999999999999999999999999999999999999865432111100 011 234
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++++..|++++..+.||+++...++++..+..+|++
T Consensus 240 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 275 (280)
T 4da9_A 240 MRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGL 275 (280)
T ss_dssp --CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTC
T ss_pred cCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 556667777777778898888766666666666655
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-43 Score=320.03 Aligned_cols=244 Identities=21% Similarity=0.322 Sum_probs=199.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~d~ 85 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--------------------GSKAFGVRVDVSSA 85 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--------------------CTTEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEEecCCCH
Confidence 4699999999999999999999999999999999998887766553 24688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 86 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 162 (277)
T 4dqx_A 86 KDAESMVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-GGGSIINTTSY-T 162 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECch-h
Confidence 9999999999999999999999999877 5788899999999999999999999999999999887 57899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........... ... ........+++++.
T Consensus 163 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-~~~---~~~~~~~~~~~r~~ 238 (277)
T 4dqx_A 163 ATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDP-AKL---RSDFNARAVMDRMG 238 (277)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCH-HHH---HHHHHTTSTTCSCB
T ss_pred hCcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccch-hHH---HHHHHhcCcccCCc
Confidence 78888999999999999999999999999999999999999999999843211100000 000 00011222345566
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..+|++
T Consensus 239 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (277)
T 4dqx_A 239 TAEEIAEAMLFLASDRSRFATGSILTVDGGS 269 (277)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred CHHHHHHHHHHHhCCccCCCcCCEEEECCch
Confidence 6777777777888887755555555555544
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=315.48 Aligned_cols=247 Identities=21% Similarity=0.290 Sum_probs=202.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 66 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--------------------GPAAYAVQMDVTRQ 66 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCCceEEEeeCCCH
Confidence 3699999999999999999999999999999999999887776665 23578899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++++.+|+||++||. +
T Consensus 67 ~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~ 144 (259)
T 4e6p_A 67 DSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQ-A 144 (259)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECCh-h
Confidence 9999999999999999999999999976 5788999999999999999999999999999999886447899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccC-CHH-HHHHHHhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPE-TVARTLVPR 248 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~-~pe-~~a~~~~~~ 248 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ ......... ..+ .....++++
T Consensus 145 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~r 223 (259)
T 4e6p_A 145 GRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALF-ARYENRPRGEKKRLVGEAVPFGR 223 (259)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHH-HHHHTCCTTHHHHHHHHHSTTSS
T ss_pred hccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhh-hhhccCChHHHHHHHhccCCCCC
Confidence 78888999999999999999999999999999999999999999999864321000 000000000 011 112234566
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+..|+|++.++.||+++...++++..+..+|+
T Consensus 224 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG 255 (259)
T 4e6p_A 224 MGTAEDLTGMAIFLASAESDYIVSQTYNVDGG 255 (259)
T ss_dssp CBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence 77888888888899998875555555555444
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=320.16 Aligned_cols=241 Identities=24% Similarity=0.360 Sum_probs=191.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+|++|||||++|||+++|++|+++|++|+++ .|+.+.+++..++++. .+.++.++.+|++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~ 87 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA-----------------AGGKALTAQADVS 87 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCC
Confidence 457999999999999999999999999999998 5667777777777765 4567889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|++ +|+||++||.
T Consensus 88 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~ 163 (267)
T 3u5t_A 88 DPAAVRRLFATAEEAFGGVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTS 163 (267)
T ss_dssp CHHHHHHHHHHHHHHHSCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCT
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeCh
Confidence 999999999999999999999999999986 578899999999999999999999999999999964 5899999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++............ .....++++
T Consensus 164 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~p~~r 233 (267)
T 3u5t_A 164 -QVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDR---------FAKLAPLER 233 (267)
T ss_dssp -HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHH---------HHTSSTTCS
T ss_pred -hhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHH---------HHhcCCCCC
Confidence 5667788899999999999999999999999999999999999999998644221110000 011122344
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+..|++++..+.||+++...++++..+..+|++
T Consensus 234 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 266 (267)
T 3u5t_A 234 LGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266 (267)
T ss_dssp CBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred CcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence 555666666667888877655555555555543
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=311.70 Aligned_cols=227 Identities=26% Similarity=0.338 Sum_probs=189.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+. .+..+.++.+|++|.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dv~d~ 95 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR----------------TGNIVRAVVCDVGDP 95 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------CCCeEEEEEcCCCCH
Confidence 4799999999999999999999999999999999999999888888663 123458899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~Iv~vsS~~ 169 (347)
++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|++.++++++|+|++++ ++|+||++||.
T Consensus 96 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~- 174 (281)
T 4dry_A 96 DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSI- 174 (281)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCH-
Confidence 9999999999999999999999999875447889999999999999999999999999999998863 26899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh---hhhhccCCHHHHHHHHh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ---MFNIICELPETVARTLV 246 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~---~~~~~~~~pe~~a~~~~ 246 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........... .......+||++|+.++
T Consensus 175 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~ 254 (281)
T 4dry_A 175 SAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVV 254 (281)
T ss_dssp GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHH
T ss_pred HhCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHH
Confidence 678888999999999999999999999999999999999999999999876543211111 11112347899999888
Q ss_pred hhhhhccc
Q 019009 247 PRIRVVKG 254 (347)
Q Consensus 247 ~~~~~~~~ 254 (347)
.....+..
T Consensus 255 fL~s~~~~ 262 (281)
T 4dry_A 255 YMASLPLS 262 (281)
T ss_dssp HHHHSCTT
T ss_pred HHhCCCcc
Confidence 76665544
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=314.72 Aligned_cols=246 Identities=24% Similarity=0.290 Sum_probs=202.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||++|||||++|||+++|++|+++|++|++++| +.+.+++..+++++ .+.++.++.+|++|
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~ 79 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA-----------------LGSDAIAIKADIRQ 79 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence 4699999999999999999999999999999866 45667777777766 45678999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ +|+||++||..
T Consensus 80 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~ 155 (270)
T 3is3_A 80 VPEIVKLFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNT 155 (270)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCch
Confidence 99999999999999999999999999986 588899999999999999999999999999999964 68999999984
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-----HHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----ART 244 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~~ 244 (347)
+...+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......... ......+++. ...
T Consensus 156 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 232 (270)
T 3is3_A 156 SKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIP---NGTSYTAEQRQQMAAHAS 232 (270)
T ss_dssp TTTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGST---TGGGSCHHHHHHHHHHHS
T ss_pred hccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccc---cccccchHHHHHHHHhcC
Confidence 46678889999999999999999999999999999999999999999986432110000 0000112221 223
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+++++..|++++..+.||+++...++++..+..+|+
T Consensus 233 p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 268 (270)
T 3is3_A 233 PLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268 (270)
T ss_dssp TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence 456677788899999999998876665555555554
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=318.49 Aligned_cols=250 Identities=18% Similarity=0.188 Sum_probs=198.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 78 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++++ .+.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~ 71 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK-----------------TGR 71 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-----------------TTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHh-----------------cCC
Confidence 36999999999999999999999999999999997 5566666666654 456
Q ss_pred eeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC
Q 019009 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK 158 (347)
Q Consensus 79 ~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~ 158 (347)
++.++.+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +
T Consensus 72 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~ 149 (281)
T 3s55_A 72 RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-N 149 (281)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C
Confidence 7899999999999999999999999999999999999987 5788999999999999999999999999999999887 4
Q ss_pred CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCH
Q 019009 159 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 238 (347)
Q Consensus 159 ~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~p 238 (347)
.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... ............
T Consensus 150 ~g~iv~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~ 227 (281)
T 3s55_A 150 YGRIVTVSSM-LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVF-GTMRPDLEKPTL 227 (281)
T ss_dssp CEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHH-HC-------CCH
T ss_pred CCEEEEECCh-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhh-ccccccccccch
Confidence 7999999998 67788889999999999999999999999999999999999999999986431100 000000000011
Q ss_pred HHHHHH------HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 239 ETVART------LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 239 e~~a~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++.... ...++..|++++..+.||+++...++++..+..+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~ 276 (281)
T 3s55_A 228 KDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGA 276 (281)
T ss_dssp HHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 111110 1134445667777777888877655555555555543
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=309.39 Aligned_cols=224 Identities=26% Similarity=0.325 Sum_probs=183.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~d~ 86 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI--------------------GDDALCVPTDVTDP 86 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------TSCCEEEECCTTSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCCeEEEEecCCCH
Confidence 4699999999999999999999999999999999999888776665 24678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~Iv~vsS~~ 169 (347)
++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|++.++++++|.|++++ ++|+||++||.
T Consensus 87 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~- 165 (272)
T 4dyv_A 87 DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSI- 165 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCS-
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECch-
Confidence 9999999999999999999999999975447888999999999999999999999999999999863 26899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh---hhhhccCCHHHHHHHHh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ---MFNIICELPETVARTLV 246 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~---~~~~~~~~pe~~a~~~~ 246 (347)
++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++........... ........|+++|+.++
T Consensus 166 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~ 245 (272)
T 4dyv_A 166 SATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVV 245 (272)
T ss_dssp STTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHH
T ss_pred hhcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHH
Confidence 688888999999999999999999999999999999999999999999875433211110 11112246788888877
Q ss_pred hhhhhcccc
Q 019009 247 PRIRVVKGS 255 (347)
Q Consensus 247 ~~~~~~~~~ 255 (347)
.....+...
T Consensus 246 fL~s~~~~~ 254 (272)
T 4dyv_A 246 YMASLPLDA 254 (272)
T ss_dssp HHHHSCTTS
T ss_pred HHhCCCCcC
Confidence 666655543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=317.93 Aligned_cols=238 Identities=20% Similarity=0.298 Sum_probs=190.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~d~ 85 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL--------------------GKDVFVFSANLSDR 85 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CSSEEEEECCTTSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEEeecCCH
Confidence 4699999999999999999999999999999999998887765543 34688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|.|+++ +.|+||++||. +
T Consensus 86 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~isS~-~ 162 (266)
T 3grp_A 86 KSIKQLAEVAEREMEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINITSI-V 162 (266)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC--
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEECCH-H
Confidence 9999999999999999999999999976 4788899999999999999999999999999999876 57999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...........+ ....+++++.
T Consensus 163 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~----------~~~~p~~r~~ 232 (266)
T 3grp_A 163 GVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAI----------MAMIPMKRMG 232 (266)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHH----------HTTCTTCSCB
T ss_pred HcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHH----------HhcCCCCCCc
Confidence 778888999999999999999999999999999999999999999998654321111111 1112345555
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++...++++..+..+|++
T Consensus 233 ~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 233 IGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 6667777777888887755555555555543
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=314.86 Aligned_cols=239 Identities=20% Similarity=0.294 Sum_probs=197.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++++ .+.++.++.+|++|
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d 92 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ-----------------AGGRAVAIRADNRD 92 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEECCCCC
Confidence 47999999999999999999999999999999665 4667777777765 45678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|.|++ +|+||++||..
T Consensus 93 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~ 168 (271)
T 3v2g_A 93 AEAIEQAIRETVEALGGLDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNL 168 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGG
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChh
Confidence 99999999999999999999999999977 588899999999999999999999999999999963 68999999874
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
+...+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ .....+.+++++
T Consensus 169 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~-----------~~~~~~~~~~r~ 237 (271)
T 3v2g_A 169 AELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA-----------EAQRERIATGSY 237 (271)
T ss_dssp GTCCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH-----------HHHHHTCTTSSC
T ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH-----------HHHHhcCCCCCC
Confidence 444457889999999999999999999999999999999999999999865422111 111122234555
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 238 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 238 GEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence 56666677777888887756555555555543
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=320.23 Aligned_cols=250 Identities=23% Similarity=0.304 Sum_probs=202.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 78 (347)
.||++|||||++|||+++|+.|+++|++|++++|+ .+++++..+++.+ .+.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~ 107 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE-----------------QGR 107 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH-----------------TTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHh-----------------cCC
Confidence 46999999999999999999999999999999886 6667776666655 456
Q ss_pred eeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC
Q 019009 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK 158 (347)
Q Consensus 79 ~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~ 158 (347)
++.++.+|++|.++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++++.
T Consensus 108 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 186 (317)
T 3oec_A 108 RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ 186 (317)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 7899999999999999999999999999999999999987 478899999999999999999999999999999988755
Q ss_pred CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhh-ccCC
Q 019009 159 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICEL 237 (347)
Q Consensus 159 ~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~-~~~~ 237 (347)
+|+||++||. ++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++...... ...+... ....
T Consensus 187 ~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~ 263 (317)
T 3oec_A 187 GGSVIFVSST-VGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKL--LKMFLPHLENPT 263 (317)
T ss_dssp CEEEEEECCG-GGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHH--HHHHCTTCSSCC
T ss_pred CCEEEEECcH-HhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhh--hhhhhhhccccc
Confidence 7999999998 6788889999999999999999999999999999999999999999998532110 0000000 0111
Q ss_pred HHHHHHHHh------hhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 238 PETVARTLV------PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 238 pe~~a~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.++..+... .+...|++++.++.||+++...++++..+..+|++
T Consensus 264 ~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~ 313 (317)
T 3oec_A 264 REDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313 (317)
T ss_dssp HHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred hhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence 222222110 23345677777778999988766666666666655
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=302.89 Aligned_cols=212 Identities=23% Similarity=0.323 Sum_probs=179.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .++.++.+|++|.+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~D~~~~~ 62 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--------------------NAVIGIVADLAHHE 62 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------------------GGEEEEECCTTSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--------------------CCceEEECCCCCHH
Confidence 5899999999999999999999999999999999998887766651 25888999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +++||++||. ++
T Consensus 63 ~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~-~~ 138 (235)
T 3l6e_A 63 DVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER--GGVLANVLSS-AA 138 (235)
T ss_dssp HHHHHHHHHHHHHCSCSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEECCE-EC
T ss_pred HHHHHHHHHHHhcCCCcEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCH-Hh
Confidence 999999999999999999999999976 5788899999999999999999999999999999876 4699999997 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++........ .....+||++|+.++..+..
T Consensus 139 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-----~~~~~~pedvA~~v~~l~~~ 213 (235)
T 3l6e_A 139 QVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVD-----PSGFMTPEDAAAYMLDALEA 213 (235)
T ss_dssp CSSCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------CBCHHHHHHHHHHHTCC
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCCCC-----CcCCCCHHHHHHHHHHHHhC
Confidence 8888999999999999999999999999999999999999999999865432211 11234799999998876654
Q ss_pred c
Q 019009 252 V 252 (347)
Q Consensus 252 ~ 252 (347)
+
T Consensus 214 ~ 214 (235)
T 3l6e_A 214 R 214 (235)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=312.38 Aligned_cols=246 Identities=20% Similarity=0.252 Sum_probs=203.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+..+..+.+|++|
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~D~~~ 72 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY---------------PDAILQPVVADLGT 72 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC---------------TTCEEEEEECCTTS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC---------------CCceEEEEecCCCC
Confidence 457999999999999999999999999999999999999999988887642 23568889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++ +++++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||.
T Consensus 73 ~~~~~~~~~----~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~- 145 (267)
T 3t4x_A 73 EQGCQDVIE----KYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIASE- 145 (267)
T ss_dssp HHHHHHHHH----HCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECCG-
T ss_pred HHHHHHHHH----hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcch-
Confidence 999887654 5789999999999987 4788899999999999999999999999999999987 57999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH-----
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART----- 244 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~----- 244 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+++|++....... ........+++..+.
T Consensus 146 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 221 (267)
T 3t4x_A 146 AAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNS----LYPNEQLTIEEAEKRFMKEN 221 (267)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHH----SSTTSCCCHHHHHHHHHHHH
T ss_pred hhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhh----cCcccCCCHHHHHHHHhhcc
Confidence 68888899999999999999999999999999999999999999999975432110 000011122222222
Q ss_pred ----HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 245 ----LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++++..|+|++.++.||+++...++++..+..+|++
T Consensus 222 ~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 262 (267)
T 3t4x_A 222 RPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGL 262 (267)
T ss_dssp CTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence 2456777888999999999988766666666666655
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=314.53 Aligned_cols=239 Identities=20% Similarity=0.240 Sum_probs=197.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~~ 69 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--------------------GRGAVHHVVDLTNE 69 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--------------------CTTCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCCeEEEECCCCCH
Confidence 4699999999999999999999999999999999999887776654 24677899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.+++|++|+||||||+..+ ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus 70 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~- 147 (271)
T 3tzq_B 70 VSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSA- 147 (271)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCH-
Confidence 99999999999999999999999998732 4567899999999999999999999999999999987 57999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........... ......+++++
T Consensus 148 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~---------~~~~~~~~~r~ 218 (271)
T 3tzq_B 148 TAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVD---------IFATHHLAGRI 218 (271)
T ss_dssp GGTSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHH---------HHHTTSTTSSC
T ss_pred HHcCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHH---------HHHhcCCCCCC
Confidence 678888999999999999999999999999999999999999999999865322110000 00111233455
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
..|++++..+.||+++...++++..+..+|+
T Consensus 219 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 219 GEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 5666677777788888775655666555555
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=319.10 Aligned_cols=237 Identities=22% Similarity=0.368 Sum_probs=194.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++++ .+.++.++.+|++|
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~d 89 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA-----------------AGGEAFAVKADVSQ 89 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------cCCcEEEEECCCCC
Confidence 4799999999999999999999999999999988 66677777777765 45678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus 90 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~- 166 (269)
T 4dmm_A 90 ESEVEALFAAVIERWGRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINIASV- 166 (269)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCH-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECch-
Confidence 99999999999999999999999999987 4788899999999999999999999999999999886 57899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...... .... ...+++++
T Consensus 167 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~----------~~~p~~r~ 233 (269)
T 4dmm_A 167 VGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA---EKLL----------EVIPLGRY 233 (269)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH---HHHG----------GGCTTSSC
T ss_pred hhcCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH---HHHH----------hcCCCCCC
Confidence 6777888899999999999999999999999999999999999999998643211 1010 01123334
Q ss_pred hhccccccceeeccch-HHHHHHhhhhhcCCc
Q 019009 250 RVVKGSGKAINYLTPP-RILLALVTAWLRRGR 280 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~ 280 (347)
..|++++..+.||+++ ...++++..+..+|+
T Consensus 234 ~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG 265 (269)
T 4dmm_A 234 GEAAEVAGVVRFLAADPAAAYITGQVINIDGG 265 (269)
T ss_dssp BCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence 4445555555577665 443444444444443
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=314.59 Aligned_cols=241 Identities=18% Similarity=0.264 Sum_probs=197.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~~ 66 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF--------------------GPRVHALRSDIADL 66 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCcceEEEccCCCH
Confidence 3699999999999999999999999999999999998887766654 24688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ +|+||++||. +
T Consensus 67 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~-~ 141 (255)
T 4eso_A 67 NEIAVLGAAAGQTLGAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSV-A 141 (255)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECCh-h
Confidence 9999999999999999999999999987 588999999999999999999999999999999964 5899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+...|++||+|+++|+++|+.|++++||+||+|+||+|+|++......... ..... ........+++++.
T Consensus 142 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~~---~~~~~~~~p~~r~~ 217 (255)
T 4eso_A 142 DEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEA-ERAEF---KTLGDNITPMKRNG 217 (255)
T ss_dssp GSSBCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHH-HHHHH---HHHHHHHSTTSSCB
T ss_pred hcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChh-hHHHH---HHHHhccCCCCCCc
Confidence 888889999999999999999999999999999999999999999998643211110 00000 00011223455666
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++ ..++++..+..+|++
T Consensus 218 ~pedvA~~v~~L~s~-~~~itG~~i~vdGG~ 247 (255)
T 4eso_A 218 TADEVARAVLFLAFE-ATFTTGAKLAVDGGL 247 (255)
T ss_dssp CHHHHHHHHHHHHHT-CTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHcCc-CcCccCCEEEECCCc
Confidence 677777777888877 545555555555554
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-42 Score=313.57 Aligned_cols=241 Identities=17% Similarity=0.225 Sum_probs=200.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+ +++++..+++.+ .+.++.++.+|++|.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~d~ 91 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIAD-----------------GGGSAEAVVADLADL 91 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHT-----------------TTCEEEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHh-----------------cCCcEEEEEecCCCH
Confidence 47999999999999999999999999999999976 455666666654 456889999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++.+ ..++++++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 92 ~~v~~~~~-~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~-~ 167 (273)
T 3uf0_A 92 EGAANVAE-ELAATRRVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVTIASM-L 167 (273)
T ss_dssp HHHHHHHH-HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHH-HHHhcCCCcEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcch-H
Confidence 99999954 4566799999999999987 5888999999999999999999999999999999887 47999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|.|++........ .. ..+.....+++++.
T Consensus 168 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~------~~~~~~~~p~~r~~ 239 (273)
T 3uf0_A 168 SFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADD--ER------AAEITARIPAGRWA 239 (273)
T ss_dssp GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH--HH------HHHHHHHSTTSSCB
T ss_pred hcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCH--HH------HHHHHhcCCCCCCC
Confidence 88888999999999999999999999999999999999999999999853321100 00 01122334566778
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++.++.||+++...++++..+..+|++
T Consensus 240 ~pedva~~v~~L~s~~a~~itG~~i~vdGG~ 270 (273)
T 3uf0_A 240 TPEDMVGPAVFLASDAASYVHGQVLAVDGGW 270 (273)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence 8999999999999988766666666555554
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=318.26 Aligned_cols=248 Identities=17% Similarity=0.231 Sum_probs=190.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 78 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++.. .+.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~ 74 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED-----------------IGS 74 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-----------------HTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh-----------------cCC
Confidence 46999999999999999999999999999999987 6677777766655 346
Q ss_pred eeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC
Q 019009 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK 158 (347)
Q Consensus 79 ~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~ 158 (347)
++.++.+|++|.++++++++++.+++|++|+||||||+... .+ +.++|++++++|+.|+++++++++|+|++++.
T Consensus 75 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 149 (278)
T 3sx2_A 75 RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPM-SA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT 149 (278)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-SS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 78999999999999999999999999999999999998642 22 58999999999999999999999999988645
Q ss_pred CcEEEEEcCCCCCCCCC----CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhc
Q 019009 159 GGHIFNMDGAGSGGSST----PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 234 (347)
Q Consensus 159 ~g~Iv~vsS~~~~~~~~----~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~ 234 (347)
+|+||++||. ++..+. ++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++................
T Consensus 150 ~g~iv~isS~-~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 228 (278)
T 3sx2_A 150 GGSIVLISSS-AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAA 228 (278)
T ss_dssp CEEEEEECCG-GGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHH
T ss_pred CcEEEEEccH-HhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccch
Confidence 7899999987 555555 67788999999999999999999999999999999999999986432110000000000
Q ss_pred cCCHHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 235 CELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 235 ~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
...+......+-.++..|++++..+.||+++...++++..+..+|++
T Consensus 229 ~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 229 TDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp CC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred hhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 00000000000023334555566666888877655566666555554
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=299.00 Aligned_cols=219 Identities=26% Similarity=0.339 Sum_probs=187.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+ .+.++.++.+|++|.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~~~ 68 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-----------------AGAKVHVLELDVADR 68 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEECCCCCH
Confidence 469999999999999999999999999999999999998888888765 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ + |+||++||. +
T Consensus 69 ~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~-~ 144 (247)
T 2jah_A 69 QGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-K-GTVVQMSSI-A 144 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-C-CEEEEEccH-H
Confidence 9999999999999999999999999876 5788899999999999999999999999999999876 3 899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhh---hcc--CCHHHHHHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN---IIC--ELPETVARTL 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~---~~~--~~pe~~a~~~ 245 (347)
+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+++|++.............. ... .+|+++|+.+
T Consensus 145 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v 224 (247)
T 2jah_A 145 GRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAV 224 (247)
T ss_dssp GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHH
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcccccCCCCHHHHHHHH
Confidence 77788889999999999999999999999999999999999999999865432111001000 011 4677777777
Q ss_pred hhhhh
Q 019009 246 VPRIR 250 (347)
Q Consensus 246 ~~~~~ 250 (347)
+..+.
T Consensus 225 ~~l~s 229 (247)
T 2jah_A 225 RYAVT 229 (247)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 65554
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=317.77 Aligned_cols=240 Identities=21% Similarity=0.280 Sum_probs=193.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC---hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.+|++|||||++|||+++|++|+++|++|++++|+ .++++++.+++++ .+.++.++.+|+
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv 72 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED-----------------QGAKVALYQSDL 72 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT-----------------TTCEEEEEECCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh-----------------cCCcEEEEECCC
Confidence 46999999999999999999999999999998765 4456666666654 456899999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+ +.|+||++||
T Consensus 73 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~iv~isS 148 (262)
T 3ksu_A 73 SNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN---PNGHIITIAT 148 (262)
T ss_dssp CSHHHHHHHHHHHHHHHCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE---EEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc---CCCEEEEEec
Confidence 9999999999999999999999999999987 47888999999999999999999999999999994 3689999998
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++......... ........+.+
T Consensus 149 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---------~~~~~~~~~~~ 218 (262)
T 3ksu_A 149 S-LLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES---------TAFHKSQAMGN 218 (262)
T ss_dssp C-HHHHHHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------------CCC
T ss_pred h-hhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH---------HHHHHhcCccc
Confidence 7 5666777888999999999999999999999999999999999999998644221110 01112234456
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
++..|++++..+.||+++ ..++++..+..+|++.
T Consensus 219 r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~ 252 (262)
T 3ksu_A 219 QLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYT 252 (262)
T ss_dssp CSCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTCC
T ss_pred CCCCHHHHHHHHHHHcCC-CCCccCCEEEECCCcc
Confidence 777888899999999988 6566666666666553
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=310.64 Aligned_cols=245 Identities=22% Similarity=0.326 Sum_probs=195.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 82 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-----------------KGLNVEGSVCDLLSR 82 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEECCCCCH
Confidence 479999999999999999999999999999999999988888877765 345788999999999
Q ss_pred HHHHHHHHHHHhhc-CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||.
T Consensus 83 ~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~- 159 (273)
T 1ae1_A 83 TERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSI- 159 (273)
T ss_dssp HHHHHHHHHHHHHTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCG-
T ss_pred HHHHHHHHHHHHHcCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCH-
Confidence 99999999999999 99999999999876 4778899999999999999999999999999999876 47899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc--hhhhhhhccCCHHHHHHHHhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--NKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~--~~~~~~~~~~~pe~~a~~~~~ 247 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||++.|++........ ..... .......+++
T Consensus 160 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~------~~~~~~~p~~ 233 (273)
T 1ae1_A 160 AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEI------DNFIVKTPMG 233 (273)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHH------HHHHHHSTTC
T ss_pred hhcCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHH------HHHHhcCCCC
Confidence 677788889999999999999999999999999999999999999999864321100 00000 0011122344
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++..|++++..+.||+++...++++..+..+|++
T Consensus 234 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 267 (273)
T 1ae1_A 234 RAGKPQEVSALIAFLCFPAASYITGQIIWADGGF 267 (273)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCcCHHHHHHHHHHHhCccccCcCCCEEEECCCc
Confidence 5556667777777888776644444444444443
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-41 Score=301.79 Aligned_cols=220 Identities=21% Similarity=0.257 Sum_probs=184.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+..+ ...++.++.+|++|.
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dv~~~ 71 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK--------------HVQEPIVLPLDITDC 71 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT--------------TSCCCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc--------------ccCcceEEeccCCCH
Confidence 469999999999999999999999999999999999999998888876421 125688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++ +.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 72 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 147 (250)
T 3nyw_A 72 TKADTEIKDIHQKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVASR-A 147 (250)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC---
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEccH-H
Confidence 9999999999999999999999999976 3566 78999999999999999999999999999877 57999999998 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+....|++||+|+++|+++|+.|+++.||+||+|+||+|+|++......... .....+|+++|+.++..+.
T Consensus 148 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~p~dva~~v~~l~s 223 (250)
T 3nyw_A 148 AKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFK----DEEMIQPDDLLNTIRCLLN 223 (250)
T ss_dssp -----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCCSC----GGGSBCHHHHHHHHHHHHT
T ss_pred hcCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCCcc----cccCCCHHHHHHHHHHHHc
Confidence 666556688999999999999999999999999999999999999998754322111 1123478999988876655
Q ss_pred hc
Q 019009 251 VV 252 (347)
Q Consensus 251 ~~ 252 (347)
.+
T Consensus 224 ~~ 225 (250)
T 3nyw_A 224 LS 225 (250)
T ss_dssp SC
T ss_pred CC
Confidence 43
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=303.24 Aligned_cols=191 Identities=29% Similarity=0.459 Sum_probs=174.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++| +++++++..+++++ .+.++.++.+|++|
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~ 65 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK-----------------LGSDAIAVRADVAN 65 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence 3699999999999999999999999999999999 88888887777765 34578889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||.
T Consensus 66 ~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~- 142 (246)
T 2uvd_A 66 AEDVTNMVKQTVDVFGQVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNIASV- 142 (246)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCH-
Confidence 99999999999999999999999999876 4778899999999999999999999999999999876 46899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
++..+.++...|++||++++.|+++|+.|++++||+||+|+||+++|++...
T Consensus 143 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 194 (246)
T 2uvd_A 143 VGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV 194 (246)
T ss_dssp HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC
T ss_pred HhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh
Confidence 5666778889999999999999999999999999999999999999998644
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=302.66 Aligned_cols=192 Identities=22% Similarity=0.322 Sum_probs=178.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 66 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE-----------------KGFKARGLVLNISDI 66 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEecCCCH
Confidence 469999999999999999999999999999999999999888888876 456789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.|+||++||. .
T Consensus 67 ~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 143 (247)
T 3lyl_A 67 ESIQNFFAEIKAENLAIDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGSV-V 143 (247)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-H
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcch-h
Confidence 9999999999999999999999999987 4788899999999999999999999999999999876 57899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
+..+.++...|++||+|++.|+++|+.|++++||+||+|+||+++|++....
T Consensus 144 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 195 (247)
T 3lyl_A 144 GSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL 195 (247)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS
T ss_pred hccCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc
Confidence 7778889999999999999999999999999999999999999999987554
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-41 Score=309.31 Aligned_cols=192 Identities=25% Similarity=0.402 Sum_probs=177.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~---~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.||++|||||++|||+++|++|+++|+ +|++++|+.++++++.+++.+.. .+.++.++.+|+
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dv 96 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF---------------PNAKVHVAQLDI 96 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC---------------TTCEEEEEECCT
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC---------------CCCeEEEEECCC
Confidence 469999999999999999999999998 99999999999999888887632 246789999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.++++++++++.+++|+||+||||||+..+..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||
T Consensus 97 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS 175 (287)
T 3rku_A 97 TQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGS 175 (287)
T ss_dssp TCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECC
Confidence 999999999999999999999999999987545778899999999999999999999999999999887 5799999999
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
. ++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++.
T Consensus 176 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 226 (287)
T 3rku_A 176 I-AGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFS 226 (287)
T ss_dssp G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHH
T ss_pred h-hhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccc
Confidence 8 68888899999999999999999999999999999999999999999985
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=308.49 Aligned_cols=244 Identities=24% Similarity=0.322 Sum_probs=199.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+. .+.++.++.+|++|.
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~~~ 83 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK----------------YGVETMAFRCDVSNY 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCeEEEEEcCCCCH
Confidence 4699999999999999999999999999999999999888877777332 235688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||...
T Consensus 84 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~ 161 (267)
T 1vl8_A 84 EEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTV 161 (267)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCcch
Confidence 9999999999999999999999999876 4778899999999999999999999999999999876 4789999999732
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+++++|+++|+.|+++.||+||+|+||+++|++....... .... .......++++..
T Consensus 162 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~------~~~~~~~p~~~~~ 233 (267)
T 1vl8_A 162 EEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--PEKL------DYMLKRIPLGRTG 233 (267)
T ss_dssp TCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--HHHH------HHHHHTCTTSSCB
T ss_pred hccCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC--hHHH------HHHHhhCCCCCCc
Confidence 6677788899999999999999999999999999999999999999985321100 0000 0001112345566
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.|++++..+.||+++...++++..+..+|+
T Consensus 234 ~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 263 (267)
T 1vl8_A 234 VPEDLKGVAVFLASEEAKYVTGQIIFVDGG 263 (267)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence 778888888888887654444444444443
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=312.24 Aligned_cols=247 Identities=21% Similarity=0.205 Sum_probs=197.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..++ .+.++.++.+|++|.
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~Dv~~~ 63 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA--------------------HGGNAVGVVGDVRSL 63 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------------------TBTTEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH--------------------cCCcEEEEEcCCCCH
Confidence 469999999999999999999999999999999999887665443 235788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~----~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++++++++++.+++|++|+||||||+.....++ .+.+.++|++++++|+.+++.++++++|+|+++ +|+||++|
T Consensus 64 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~is 141 (281)
T 3zv4_A 64 QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTI 141 (281)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEe
Confidence 999999999999999999999999986422333 345567899999999999999999999999875 58999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH-HHHHH
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VARTL 245 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-~a~~~ 245 (347)
|. ++..+.++...|++||+|+++|+++|+.|+++. |+||+|+||+|+|+|................. ..+. ....+
T Consensus 142 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p 218 (281)
T 3zv4_A 142 SN-AGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVP-LADMLKSVLP 218 (281)
T ss_dssp CG-GGTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CC-HHHHHHHTCT
T ss_pred cc-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchh-HHHHHHhcCC
Confidence 98 678888899999999999999999999999987 99999999999999864422111110000000 0111 22335
Q ss_pred hhhhhhccccccceeeccc-hHHHHHHhhhhhcCCccc
Q 019009 246 VPRIRVVKGSGKAINYLTP-PRILLALVTAWLRRGRWF 282 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 282 (347)
++++..|++++..+.||++ +...++++..+..+|++.
T Consensus 219 ~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 219 IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 6788889999999999999 777667777777777663
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=311.47 Aligned_cols=215 Identities=20% Similarity=0.304 Sum_probs=180.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-------HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.||++|||||++|||+++|++|+++|++|++++|+.++ +++..++++. .+.++.++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 67 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA-----------------AGGQGLAL 67 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHH-----------------HTSEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHh-----------------cCCeEEEE
Confidence 46999999999999999999999999999999999764 5555555554 35689999
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||
T Consensus 68 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv 145 (274)
T 3e03_A 68 KCDIREEDQVRAAVAATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-PNPHIL 145 (274)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-SSCEEE
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-CCceEE
Confidence 99999999999999999999999999999999986 4788899999999999999999999999999999887 579999
Q ss_pred EEcCCCCCCCC--CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCC-cccCcccccCcccchhhhhhhccCCHHH
Q 019009 164 NMDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLLSGSTIQNKQMFNIICELPET 240 (347)
Q Consensus 164 ~vsS~~~~~~~--~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG-~v~T~~~~~~~~~~~~~~~~~~~~~pe~ 240 (347)
++||. ++..+ .++...|++||+|+++|+++|+.|++++||+||+|+|| +++|++......... ....+||+
T Consensus 146 ~isS~-~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~~-----~~~~~ped 219 (274)
T 3e03_A 146 TLAPP-PSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDA-----AACRRPEI 219 (274)
T ss_dssp ECCCC-CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CCCG-----GGSBCTHH
T ss_pred EECCh-HhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcccccc-----cccCCHHH
Confidence 99997 56555 56778999999999999999999999999999999999 689998633221111 11346888
Q ss_pred HHHHHhhhhh
Q 019009 241 VARTLVPRIR 250 (347)
Q Consensus 241 ~a~~~~~~~~ 250 (347)
+|+.++..+.
T Consensus 220 vA~~v~~l~s 229 (274)
T 3e03_A 220 MADAAHAVLT 229 (274)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 8887765443
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=307.93 Aligned_cols=224 Identities=24% Similarity=0.321 Sum_probs=195.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++ .+.++.++.+|++|.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d~ 92 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-----------------QGFDAHGVVCDVRHL 92 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCceEEEEccCCCH
Confidence 469999999999999999999999999999999999999998888876 456789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.+++++++++|+.|++.++++++|+|++++.+|+||++||. +
T Consensus 93 ~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~-~ 170 (301)
T 3tjr_A 93 DEMVRLADEAFRLLGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASF-A 170 (301)
T ss_dssp HHHHHHHHHHHHHHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCch-h
Confidence 9999999999999999999999999987 5888999999999999999999999999999999887447899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh----------hh----hhhccC
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK----------QM----FNIICE 236 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~----------~~----~~~~~~ 236 (347)
+..+.++...|++||+|+++|+++|+.|+++.||+|++|+||+|+|++.......... .+ ......
T Consensus 171 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (301)
T 3tjr_A 171 GLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESV 250 (301)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CC
T ss_pred hcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCC
Confidence 8888999999999999999999999999999999999999999999986532110000 00 001234
Q ss_pred CHHHHHHHHhhhhhhcc
Q 019009 237 LPETVARTLVPRIRVVK 253 (347)
Q Consensus 237 ~pe~~a~~~~~~~~~~~ 253 (347)
+|+++|+.++..+...+
T Consensus 251 ~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 251 SADDVARLTADAILANR 267 (301)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcCC
Confidence 89999999998887543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=309.38 Aligned_cols=244 Identities=18% Similarity=0.267 Sum_probs=198.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 68 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-----------------KGVEARSYVCDVTSE 68 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCH
Confidence 369999999999999999999999999999999999988887777754 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 69 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 146 (262)
T 1zem_A 69 EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASM-A 146 (262)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH-H
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcch-h
Confidence 999999999999999999999999987225788899999999999999999999999999999876 47899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhh-hhccCCHH-H----HHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPE-T----VART 244 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~-~~~~~~pe-~----~a~~ 244 (347)
+..+.++...|++||+++++|+++|+.|++++||+||+|+||+++|++............. ......++ . ....
T Consensus 147 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (262)
T 1zem_A 147 GVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 226 (262)
T ss_dssp HHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcC
Confidence 6677788899999999999999999999999999999999999999985321000000000 00000122 1 1123
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhh
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVT 273 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 273 (347)
+++++..|++++..+.||+++...++++.
T Consensus 227 p~~r~~~p~dvA~~v~~l~s~~~~~itG~ 255 (262)
T 1zem_A 227 PMRRYGDINEIPGVVAFLLGDDSSFMTGV 255 (262)
T ss_dssp TTSSCBCGGGSHHHHHHHHSGGGTTCCSC
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCcCCc
Confidence 45667789999999999998875443333
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=314.66 Aligned_cols=242 Identities=19% Similarity=0.235 Sum_probs=199.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++++ .+.++.++.+|++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~ 110 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-----------------CGRKAVLLPGDLS 110 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-----------------TTCCEEECCCCTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-----------------cCCcEEEEEecCC
Confidence 469999999999999999999999999999999973 345555555544 4567889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++ +|+||++||.
T Consensus 111 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~ 187 (294)
T 3r3s_A 111 DESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSI 187 (294)
T ss_dssp SHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCh
Confidence 9999999999999999999999999998654567889999999999999999999999999999963 5899999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ .... ......++++
T Consensus 188 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~-------~~~~~~p~~r 258 (294)
T 3r3s_A 188 -QAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ-DKIP-------QFGQQTPMKR 258 (294)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG-GGST-------TTTTTSTTSS
T ss_pred -hhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH-HHHH-------HHHhcCCCCC
Confidence 678888999999999999999999999999999999999999999999843221110 1110 1112234567
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+..|++++..+.||+++...++++..+..+|++
T Consensus 259 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 291 (294)
T 3r3s_A 259 AGQPAELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 778888888889999988755555555555543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-41 Score=304.52 Aligned_cols=245 Identities=22% Similarity=0.290 Sum_probs=195.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.. .+.++.++.+|++|.
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~ 76 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA---------------PDAEVLTTVADVSDE 76 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTCCEEEEECCTTSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc---------------CCceEEEEEccCCCH
Confidence 46999999999999999999999999999999999998888877776521 145788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|++.++++++|.|+++ +.|+||++||. +
T Consensus 77 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 154 (267)
T 1iy8_A 77 AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASV-G 154 (267)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcch-h
Confidence 999999999999999999999999987522678899999999999999999999999999999876 47899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHH----HHH-HHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE----TVA-RTL 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe----~~a-~~~ 245 (347)
+..+.++...|++||+++++|+++|+.|++++||+||+|+||+++|++.......... ...+ ... ..+
T Consensus 155 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~~p 227 (267)
T 1iy8_A 155 GIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP-------ENPRKAAEEFIQVNP 227 (267)
T ss_dssp GTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCT-------TCHHHHHHHHHTTCT
T ss_pred hccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccCh-------hhhhhHHHHHhccCC
Confidence 7778888999999999999999999999999999999999999999985321000000 0011 010 112
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
++++..|++++..+.||+++...++++..+..+|
T Consensus 228 ~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdG 261 (267)
T 1iy8_A 228 SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG 261 (267)
T ss_dssp TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 3344556666666677777665444444443333
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-42 Score=310.75 Aligned_cols=240 Identities=20% Similarity=0.271 Sum_probs=191.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++++ .+.++.++.+|++|
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~ 69 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK-----------------LGRSALAIKADLTN 69 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT-----------------TTSCCEEEECCTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEEcCCCC
Confidence 46999999999999999999999999999998 6677777777777755 45678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++ +|+||++||.
T Consensus 70 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~- 145 (259)
T 3edm_A 70 AAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQ- 145 (259)
T ss_dssp HHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCH-
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCH-
Confidence 999999999999999999999999998744678899999999999999999999999999999975 5899999987
Q ss_pred CCC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 170 SGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 170 ~~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++. .+.++...|++||+|+++|+++|+.|+++. |+||+|+||+|+|++......... ........++++
T Consensus 146 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~---------~~~~~~~~p~~r 215 (259)
T 3edm_A 146 AGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEV---------RERVAGATSLKR 215 (259)
T ss_dssp HHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------------------------------C
T ss_pred HhccCCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHH---------HHHHHhcCCCCC
Confidence 454 677888999999999999999999999886 999999999999998654321100 001112334556
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
...|++++..+.||+++...++++..+..+|++
T Consensus 216 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~ 248 (259)
T 3edm_A 216 EGSSEDVAGLVAFLASDDAAYVTGACYDINGGV 248 (259)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCS
T ss_pred CcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 667777777778999888755556555555554
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=312.72 Aligned_cols=243 Identities=15% Similarity=0.108 Sum_probs=199.4
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||++ |||+++|++|+++|++|++++|+.+..+...+..++ ...+.++.||++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dv~ 90 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES------------------LGVKLTVPCDVS 90 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH------------------HTCCEEEECCTT
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh------------------cCCeEEEEcCCC
Confidence 469999999996 999999999999999999999997655444333322 124678999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|+||+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 91 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~i 167 (296)
T 3k31_A 91 DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTL 167 (296)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEE
Confidence 9999999999999999999999999998652 167889999999999999999999999999999964 6899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.+++..|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ .. ........+
T Consensus 168 sS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~------~~~~~~~~p 238 (296)
T 3k31_A 168 SYY-GAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFH--YI------LTWNKYNSP 238 (296)
T ss_dssp ECG-GGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHH--HH------HHHHHHHST
T ss_pred Eeh-hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchH--HH------HHHHHhcCC
Confidence 998 677888999999999999999999999999999999999999999999864332110 00 011122334
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD 283 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (347)
++++..|++++..+.||+++...++++..+..+|++..
T Consensus 239 ~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 276 (296)
T 3k31_A 239 LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV 276 (296)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence 56666777788888899998877777777777776643
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=307.07 Aligned_cols=247 Identities=21% Similarity=0.211 Sum_probs=191.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++|++++ +++..+++.+. .+.++.++.+|++|
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~ 66 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ----------------HGVKVLYDGADLSK 66 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH----------------HTSCEEEECCCTTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhc----------------cCCcEEEEECCCCC
Confidence 36999999999999999999999999999999999887 87777777542 13568889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||.
T Consensus 67 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~- 143 (260)
T 1x1t_A 67 GEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASA- 143 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECcH-
Confidence 99999999999999999999999999876 4778899999999999999999999999999999876 47899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH------HHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET------VAR 243 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~------~a~ 243 (347)
++..+.++...|++||++++.|+++|+.|++++||+||+|+||+|+|++........... ...++++ ...
T Consensus 144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 219 (260)
T 1x1t_A 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK----NGVDQETAARELLSEK 219 (260)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CHHHH
T ss_pred HhCcCCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccc----cCCchHHHHHHHhhcc
Confidence 677778889999999999999999999999999999999999999999864321100000 0000000 111
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.+++++..|++++..+.|++++...++++..+..+|+
T Consensus 220 ~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG 256 (260)
T 1x1t_A 220 QPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp CTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 2234455566666666777776553444444444443
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-41 Score=304.64 Aligned_cols=242 Identities=24% Similarity=0.305 Sum_probs=199.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 75 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG-----------------EGLSVTGTVCHVGKA 75 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEccCCCH
Confidence 469999999999999999999999999999999999988888777765 345788899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|+++ +.++||++||. +
T Consensus 76 ~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 153 (260)
T 2zat_A 76 EDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSV-G 153 (260)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEech-h
Confidence 999999999999999999999999986434678889999999999999999999999999999887 47899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||++++.|+++++.|++++||+||+|+||++.|++....... .... .......+++++.
T Consensus 154 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~------~~~~~~~~~~~~~ 225 (260)
T 2zat_A 154 AYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD--KARK------EYMKESLRIRRLG 225 (260)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS--HHHH------HHHHHHHTCSSCB
T ss_pred hcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC--hHHH------HHHHhcCCCCCCC
Confidence 7778888999999999999999999999999999999999999999975321000 0000 0011122345667
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCC
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
.|++++..+.||+++...++++..+..+|
T Consensus 226 ~~~dva~~v~~l~s~~~~~~tG~~~~vdg 254 (260)
T 2zat_A 226 NPEDCAGIVSFLCSEDASYITGETVVVGG 254 (260)
T ss_dssp CGGGGHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence 78888888889888765443443333333
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-41 Score=302.28 Aligned_cols=190 Identities=23% Similarity=0.367 Sum_probs=174.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|+++++++..++++. .+.++.++.+|++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~ 64 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-----------------AGGHAVAVKVDVSDRD 64 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTSHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCHH
Confidence 58999999999999999999999999999999999988888777765 3457889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++..|+||++||. ++
T Consensus 65 ~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~ 142 (256)
T 1geg_A 65 QVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ-AG 142 (256)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GG
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECch-hh
Confidence 999999999999999999999999876 4788899999999999999999999999999999876326899999987 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..+.++...|++||+++++|+++|+.|++++||+||+|+||+++|++..
T Consensus 143 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 191 (256)
T 1geg_A 143 HVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA 191 (256)
T ss_dssp TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh
Confidence 7788889999999999999999999999999999999999999999853
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=307.07 Aligned_cols=194 Identities=25% Similarity=0.371 Sum_probs=174.7
Q ss_pred CCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVST-RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas-~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++++. .+.++.++.+|++|
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL----------------GLGRVEAVVCDVTS 84 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------CSSCEEEEECCTTC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc----------------CCCceEEEEeCCCC
Confidence 46999999998 69999999999999999999999999998888887542 23578999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.+++||++||.
T Consensus 85 ~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~- 162 (266)
T 3o38_A 85 TEAVDALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASV- 162 (266)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCH-
Confidence 99999999999999999999999999877 4788899999999999999999999999999999987567899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
++..+.++...|++||+|++.|+++|+.|++++||+||+|+||+|+|++....
T Consensus 163 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 215 (266)
T 3o38_A 163 LGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT 215 (266)
T ss_dssp GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred HHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc
Confidence 67888889999999999999999999999999999999999999999986543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=305.19 Aligned_cols=190 Identities=27% Similarity=0.417 Sum_probs=175.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+ .+.++.++.+|++|.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 70 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-----------------KGFKVEASVCDLSSR 70 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCCH
Confidence 469999999999999999999999999999999999988888877765 345788999999999
Q ss_pred HHHHHHHHHHHhhc-CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||.
T Consensus 71 ~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~- 147 (260)
T 2ae2_A 71 SERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSV- 147 (260)
T ss_dssp HHHHHHHHHHHHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCG-
T ss_pred HHHHHHHHHHHHHcCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcch-
Confidence 99999999999999 89999999999876 4778899999999999999999999999999999887 47899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++..+.++...|++||++++.|+++++.|++++||+||+|+||+++|++..
T Consensus 148 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 198 (260)
T 2ae2_A 148 SGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE 198 (260)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHH
T ss_pred hhccCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchh
Confidence 677788888999999999999999999999999999999999999999854
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=307.01 Aligned_cols=244 Identities=22% Similarity=0.262 Sum_probs=188.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 67 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI--------------------GDAALAVAADISKE 67 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCTTSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEecCCCH
Confidence 4699999999999999999999999999999999999887776654 24688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC---CCcEEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---KGGHIFNMDG 167 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~---~~g~Iv~vsS 167 (347)
++++++++++.++++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++++ ..++||++||
T Consensus 68 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS 147 (261)
T 3n74_A 68 ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVAS 147 (261)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCc
Confidence 9999999999999999999999999876446788889999999999999999999999999998752 2678999999
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+++|++............. .......+++
T Consensus 148 ~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~------~~~~~~~~~~ 220 (261)
T 3n74_A 148 T-GAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIR------KKFRDSIPMG 220 (261)
T ss_dssp T-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTS
T ss_pred h-hhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHH------HHHhhcCCcC
Confidence 8 67788899999999999999999999999999999999999999999987543211111100 0011122334
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++..|++++..+.||+++...++++..+..+|++
T Consensus 221 ~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~ 254 (261)
T 3n74_A 221 RLLKPDDLAEAAAFLCSPQASMITGVALDVDGGR 254 (261)
T ss_dssp SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred CCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCc
Confidence 5555666666667888877655555555555544
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=306.44 Aligned_cols=243 Identities=20% Similarity=0.236 Sum_probs=196.8
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
....+|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++++ .+.++.++.+|
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D 71 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-----------------LGFDFYASEGN 71 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH-----------------TTCCCEEEECC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCeeEEEecC
Confidence 345679999999999999999999999999999988 777777777777765 44678899999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++|.++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++|
T Consensus 72 v~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~is 149 (256)
T 3ezl_A 72 VGDWDSTKQAFDKVKAEVGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINIS 149 (256)
T ss_dssp TTCHHHHHHHHHHHHHHTCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEc
Confidence 99999999999999999999999999999987 4788899999999999999999999999999999887 479999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~ 246 (347)
|. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........... .....++
T Consensus 150 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~----------~~~~~~~ 218 (256)
T 3ezl_A 150 SV-NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK----------IVATIPV 218 (256)
T ss_dssp CC-CGGGSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH----------HHHHSTT
T ss_pred ch-hhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHH----------HHhcCCC
Confidence 98 677888999999999999999999999999999999999999999999875432211111 1112223
Q ss_pred hhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 247 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
.++..|++++..+.||+++...++++..+..+|+
T Consensus 219 ~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (256)
T 3ezl_A 219 RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 252 (256)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence 4444555666666677776654444444444443
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=306.69 Aligned_cols=246 Identities=21% Similarity=0.286 Sum_probs=195.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH--HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|++|||||++|||+++|++|+++|++|++++|++++ +++..+++++ .+.++.++.+|++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~ 64 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA-----------------ADQKAVFVGLDVTD 64 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT-----------------TTCCEEEEECCTTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh-----------------cCCcEEEEEccCCC
Confidence 6899999999999999999999999999999999887 7777666654 34578899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.+|+||++||.
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~- 142 (258)
T 3a28_C 65 KANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASI- 142 (258)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCG-
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcc-
Confidence 99999999999999999999999999876 4788899999999999999999999999999999876323899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhh-ccCCHH---HH-HHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICELPE---TV-ART 244 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~-~~~~pe---~~-a~~ 244 (347)
++..+.++...|++||+++++|+++|+.|++++||+||+|+||+++|++....... .... ....++ .. ...
T Consensus 143 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 218 (258)
T 3a28_C 143 AAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAE----LSKINGKPIGENFKEYSSSI 218 (258)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHH----HHHHHCCCTTHHHHHHHTTC
T ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhh----hccccCCchHHHHHHHHhcC
Confidence 67778888999999999999999999999999999999999999999985421100 0000 000001 00 011
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+++++..|++++..+.||+++...++++..+..+|+
T Consensus 219 p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 254 (258)
T 3a28_C 219 ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG 254 (258)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence 234455666667677777777654444444444443
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-42 Score=314.13 Aligned_cols=217 Identities=18% Similarity=0.237 Sum_probs=184.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-------HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-------~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++++ .+.++.++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 70 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-----------------AGGQALPI 70 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-----------------HTSEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-----------------cCCcEEEE
Confidence 4799999999999999999999999999999999987 46666666655 35689999
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||
T Consensus 71 ~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv 148 (285)
T 3sc4_A 71 VGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-DNPHIL 148 (285)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-SSCEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEE
Confidence 99999999999999999999999999999999987 5789999999999999999999999999999999887 578999
Q ss_pred EEcCCCCCCCCC-CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCC-cccCcccccCcccchhhhhhhccCCHHHH
Q 019009 164 NMDGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 164 ~vsS~~~~~~~~-~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG-~v~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
++||. ++..+. ++...|++||+|+++|+++|+.|++++||+||+|+|| ++.|++......... ......+||++
T Consensus 149 ~isS~-~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~---~~~r~~~pedv 224 (285)
T 3sc4_A 149 TLSPP-IRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDE---AMARSRKPEVY 224 (285)
T ss_dssp ECCCC-CCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCC---CCTTCBCTHHH
T ss_pred EECCh-hhccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccccc---cccCCCCHHHH
Confidence 99997 455554 7779999999999999999999999999999999999 689988643211100 00112367777
Q ss_pred HHHHhhhhh
Q 019009 242 ARTLVPRIR 250 (347)
Q Consensus 242 a~~~~~~~~ 250 (347)
|+.++..+.
T Consensus 225 A~~~~~l~s 233 (285)
T 3sc4_A 225 ADAAYVVLN 233 (285)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 777764443
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-41 Score=309.37 Aligned_cols=241 Identities=16% Similarity=0.152 Sum_probs=193.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++++. .+.++.++.+|++|
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~~ 71 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR----------------RPNSAITVQADLSN 71 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh----------------cCCeeEEEEeecCC
Confidence 369999999999999999999999999999999 9999988888887632 34578899999999
Q ss_pred HH-----------------HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCC--------------HHHHHHHHHhh
Q 019009 90 PA-----------------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT--------------NEEIEQIVSTN 138 (347)
Q Consensus 90 ~~-----------------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~--------------~e~~~~~~~vN 138 (347)
.+ +++++++++.+++|++|+||||||+.. ..++.+.+ .++|++++++|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N 150 (291)
T 1e7w_A 72 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSN 150 (291)
T ss_dssp SCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHH
T ss_pred cccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHH
Confidence 99 999999999999999999999999876 46778888 99999999999
Q ss_pred hhHHHHHHHHHHHHhHcCCC-----CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCc
Q 019009 139 LVGSILCTREAMRVMRDQPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM 213 (347)
Q Consensus 139 ~~g~~~l~~~~lp~l~~~~~-----~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~ 213 (347)
+.+++.++++++|+|++++. .|+||++||. ++..+.++...|++||+++++|+++|+.|++++||+||+|+||+
T Consensus 151 ~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~ 229 (291)
T 1e7w_A 151 AIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 229 (291)
T ss_dssp THHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEech-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCC
Confidence 99999999999999987621 5899999998 67788889999999999999999999999999999999999999
Q ss_pred ccCcccccCcccchhhhhhhccCCHHHHHHHHhh-hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 214 VLTDLLLSGSTIQNKQMFNIICELPETVARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 214 v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
|+|++ . ........+. ...++. +...|++++..+.||+++...++++..+..+|++
T Consensus 230 v~T~~-~-~~~~~~~~~~----------~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 286 (291)
T 1e7w_A 230 SVLVD-D-MPPAVWEGHR----------SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286 (291)
T ss_dssp BCCGG-G-SCHHHHHHHH----------TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ccCCc-c-CCHHHHHHHH----------hhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence 99998 3 2110000000 011222 3444555555556777766544444444444443
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=299.76 Aligned_cols=218 Identities=22% Similarity=0.256 Sum_probs=184.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|+.+++++. ...++.++.+|++|
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~Dv~d 70 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-----------------------NLPNTLCAQVDVTD 70 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-----------------------CCTTEEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-----------------------hcCCceEEEecCCC
Confidence 3469999999999999999999999999999999998765432 12357889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||.
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~IV~isS~- 147 (266)
T 3p19_A 71 KYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINISSI- 147 (266)
T ss_dssp HHHHHHHHHHHHHHHCSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG-
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCh-
Confidence 99999999999999999999999999987 5788999999999999999999999999999999887 47899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh-h----h-hccCCHHHHHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM-F----N-IICELPETVAR 243 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~-~----~-~~~~~pe~~a~ 243 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++............ . + .....|+++|+
T Consensus 148 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~ 227 (266)
T 3p19_A 148 AGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVAR 227 (266)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHH
T ss_pred hhCCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHH
Confidence 6888889999999999999999999999999999999999999999998765432211110 0 0 11246777777
Q ss_pred HHhhhhhhcc
Q 019009 244 TLVPRIRVVK 253 (347)
Q Consensus 244 ~~~~~~~~~~ 253 (347)
.++..+..+.
T Consensus 228 av~~l~~~~~ 237 (266)
T 3p19_A 228 AVLFAYQQPQ 237 (266)
T ss_dssp HHHHHHHSCT
T ss_pred HHHHHHcCCC
Confidence 7776655544
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=298.71 Aligned_cols=192 Identities=21% Similarity=0.294 Sum_probs=174.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC--C
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV--C 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--s 88 (347)
.||++|||||++|||+++|++|+++|++|++++|+++++++..+++++. ...+..++.+|+ +
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~d~d~~ 76 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA----------------GQPQPLIIALNLENA 76 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------TSCCCEEEECCTTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc----------------CCCCceEEEeccccC
Confidence 4699999999999999999999999999999999999999888888763 123455666666 9
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|++.++++++|+|+++ +.++||++||.
T Consensus 77 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~ 155 (247)
T 3i1j_A 77 TAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAFTSSS 155 (247)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEEECCG
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEEEcch
Confidence 99999999999999999999999999986546788999999999999999999999999999999877 57899999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~~~ 220 (347)
.+..+.++...|++||+|+++|+++|+.|+++ .||+||+|+||+++|++..
T Consensus 156 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~ 207 (247)
T 3i1j_A 156 -VGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRA 207 (247)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHH
T ss_pred -hhcCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccch
Confidence 67888899999999999999999999999976 8999999999999999864
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-41 Score=302.38 Aligned_cols=238 Identities=16% Similarity=0.145 Sum_probs=193.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
||++|||||++|||+++|++|+++| ++|++++|++++++++.+++ +.++.++.+|++|
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~ 61 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY--------------------GDRFFYVVGDITE 61 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEESCTTS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh--------------------CCceEEEECCCCC
Confidence 6999999999999999999999985 78999999998877766554 2468899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|++.++++++|+|+++ +|+||++||.
T Consensus 62 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~g~iv~isS~- 138 (254)
T 3kzv_A 62 DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--NGNVVFVSSD- 138 (254)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCS-
T ss_pred HHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCeEEEEcCc-
Confidence 9999999999999999999999999986545788999999999999999999999999999999876 4899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHH----HHHHHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE----TVARTL 245 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe----~~a~~~ 245 (347)
++..+.++...|++||+|+++|+++|+.|+ .||+||+|+||+|+|++........... ...++ .....+
T Consensus 139 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 211 (254)
T 3kzv_A 139 ACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPS-----SMSAEQLKMFRGLKE 211 (254)
T ss_dssp CCCCSSCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTT-----TSCHHHHHHHHHHHT
T ss_pred hhccCCCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCcc-----ccCHHHHHHHHHHHh
Confidence 678888999999999999999999999998 5899999999999999875432211000 00111 122334
Q ss_pred hhhhhhccccccceeeccchHH-HHHHhhhhhcCC
Q 019009 246 VPRIRVVKGSGKAINYLTPPRI-LLALVTAWLRRG 279 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 279 (347)
++++..|++++..+.||+++.. .++++..+..++
T Consensus 212 ~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg 246 (254)
T 3kzv_A 212 NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYND 246 (254)
T ss_dssp TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTC
T ss_pred cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecC
Confidence 5677788888888899998773 555555544444
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=308.22 Aligned_cols=192 Identities=23% Similarity=0.328 Sum_probs=170.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+..+...+++++ .+.++.++.+|++|
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~ 90 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE-----------------KGYKAAVIKFDAAS 90 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCceEEEECCCCC
Confidence 46999999999999999999999999999999995 4455555566654 45678999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|+|+++ +.|+||++||.
T Consensus 91 ~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~- 167 (271)
T 4iin_A 91 ESDFIEAIQTIVQSDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVVNVASI- 167 (271)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH-
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEech-
Confidence 99999999999999999999999999987 4778899999999999999999999999999999887 47999999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
++..+.++...|++||+|++.|+++|+.|+++.||+||+|+||+|+|++....
T Consensus 168 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 220 (271)
T 4iin_A 168 IGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL 220 (271)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----
T ss_pred hhcCCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh
Confidence 67778888999999999999999999999999999999999999999986543
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=302.20 Aligned_cols=187 Identities=21% Similarity=0.320 Sum_probs=165.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++|++ +++++ ++++ .+.++.++.+|++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-----------------~~~~~~~~~~Dv~~ 65 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRN-----------------LGRRVLTVKCDVSQ 65 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHH-----------------TTCCEEEEECCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHh-----------------cCCcEEEEEeecCC
Confidence 369999999999999999999999999999999998 76654 3333 34578889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||.
T Consensus 66 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~- 142 (249)
T 2ew8_A 66 PGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTST- 142 (249)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcch-
Confidence 99999999999999999999999999876 4778899999999999999999999999999999876 47899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++..+.++...|++||++++.|+++|+.|+++.||+||+|+||+++|++..
T Consensus 143 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 193 (249)
T 2ew8_A 143 TYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE 193 (249)
T ss_dssp GGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence 677778889999999999999999999999999999999999999999864
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=312.75 Aligned_cols=241 Identities=17% Similarity=0.188 Sum_probs=198.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH-HHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT-VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||++|||||++|||+++|++|+++|++|++++|+.++..+. .+.+++ .+.++.++.+|++|
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~d 108 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-----------------EGVKCVLLPGDLSD 108 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-----------------TTCCEEEEESCTTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----------------cCCcEEEEECCCCC
Confidence 469999999999999999999999999999999998754433 333332 45678999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|++.++++++|+|++ +|+||++||.
T Consensus 109 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~- 184 (291)
T 3ijr_A 109 EQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASI- 184 (291)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCT-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEech-
Confidence 999999999999999999999999998754567889999999999999999999999999999953 5799999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ ..... ....+++++
T Consensus 185 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~~~~-------~~~~p~~r~ 255 (291)
T 3ijr_A 185 VAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEK--KVSQF-------GSNVPMQRP 255 (291)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHH--HHHHT-------TTTSTTSSC
T ss_pred HhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHH--HHHHH-------HccCCCCCC
Confidence 677778888999999999999999999999999999999999999999853321110 00000 012235666
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 256 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 287 (291)
T 3ijr_A 256 GQPYELAPAYVYLASSDSSYVTGQMIHVNGGV 287 (291)
T ss_dssp BCGGGTHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred cCHHHHHHHHHHHhCCccCCCcCCEEEECCCc
Confidence 77888888889999988766666666555554
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=295.25 Aligned_cols=217 Identities=25% Similarity=0.328 Sum_probs=183.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 90 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-----------------AGGEAESHACDLSHS 90 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECCTTCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------hCCceeEEEecCCCH
Confidence 369999999999999999999999999999999999999988888876 456889999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 91 ~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 168 (262)
T 3rkr_A 91 DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSL-A 168 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEECSS-C
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEech-h
Confidence 999999999999999999999999984435788899999999999999999999999999999887 57899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+++|+.|+++.||+|++|+||+|+|++........ .......|+++|+.++..+.
T Consensus 169 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~p~dvA~~v~~l~s 244 (262)
T 3rkr_A 169 GKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAKK----SALGAIEPDDIADVVALLAT 244 (262)
T ss_dssp SSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCCHHHHHHHHHHHHT
T ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccccc----ccccCCCHHHHHHHHHHHhc
Confidence 78888899999999999999999999999999999999999999999865432211 11123478888888775544
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-41 Score=309.23 Aligned_cols=242 Identities=14% Similarity=0.151 Sum_probs=194.0
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||+ +|||+++|++|+++|++|++++|+++.. +..+++.+. ..++.++.+|++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~-----------------~~~~~~~~~Dv~ 91 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEE-----------------LGAFVAGHCDVA 91 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHH-----------------HTCEEEEECCTT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHh-----------------cCCceEEECCCC
Confidence 46999999999 5699999999999999999999996533 334444432 235788999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|+||+||||||+..+ ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 92 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~i 168 (293)
T 3grk_A 92 DAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTL 168 (293)
T ss_dssp CHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEE
Confidence 9999999999999999999999999998642 367889999999999999999999999999999974 6899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.+++..|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ ... .......+
T Consensus 169 sS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~------~~~~~~~p 239 (293)
T 3grk_A 169 TYY-GAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFR--YIL------KWNEYNAP 239 (293)
T ss_dssp ECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHH--HHH------HHHHHHST
T ss_pred eeh-hhccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchH--HHH------HHHHhcCC
Confidence 998 677888999999999999999999999999999999999999999999864432110 000 11122334
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
++++..|++++..+.||+++...++++..+..+|++.
T Consensus 240 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (293)
T 3grk_A 240 LRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYH 276 (293)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcc
Confidence 5566677777777789998877666666666666654
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=307.48 Aligned_cols=194 Identities=22% Similarity=0.343 Sum_probs=173.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+..+|++|||||++|||+++|++|+++|++|++++ |+.+.+++..+++.. .+.++.++.+|+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl 84 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-----------------AGRDFKAYAVDV 84 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-----------------TTCCCEEEECCT
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-----------------cCCceEEEEecC
Confidence 34579999999999999999999999999999998 556666665555543 346789999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||
T Consensus 85 ~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS 162 (269)
T 3gk3_A 85 ADFESCERCAEKVLADFGKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGS 162 (269)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeCC
Confidence 9999999999999999999999999999987 4788899999999999999999999999999999876 5799999998
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
. ++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++....
T Consensus 163 ~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 216 (269)
T 3gk3_A 163 V-NGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV 216 (269)
T ss_dssp H-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-
T ss_pred h-hhccCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh
Confidence 7 67778888999999999999999999999999999999999999999987553
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=306.73 Aligned_cols=263 Identities=11% Similarity=0.089 Sum_probs=200.2
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||+ +|||+++|++|+++|++|++++|+++ .++..+++.+. . ..+.++.+|++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~----------------~-~~~~~~~~D~~ 66 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE----------------L-NSPYVYELDVS 66 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH----------------T-TCCCEEECCTT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHh----------------c-CCcEEEEcCCC
Confidence 36999999999 99999999999999999999999986 55555666542 1 23678999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|++|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++
T Consensus 67 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~i 143 (275)
T 2pd4_A 67 KEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTL 143 (275)
T ss_dssp CHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEE
Confidence 9999999999999999999999999998652 156778999999999999999999999999999974 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... .. ... ......+
T Consensus 144 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~-~~~------~~~~~~p 214 (275)
T 2pd4_A 144 SYL-GSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-RM-ILK------WNEINAP 214 (275)
T ss_dssp ECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-HH-HHH------HHHHHST
T ss_pred ecc-hhcCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcccc-HH-HHH------HHHhcCC
Confidence 997 67778888999999999999999999999999999999999999999986432110 00 000 0001112
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCccccc--CCccccccchhhhhhhccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD--QGRALYAAEADRIRNWAEN 303 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 303 (347)
+.++..|++++..+.|++++...+.++..+..+|++... .....+.+..+++|+++++
T Consensus 215 ~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~ 274 (275)
T 2pd4_A 215 LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE 274 (275)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred cCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence 233344455555555666655444455555555554321 1223455567778887654
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-41 Score=303.61 Aligned_cols=191 Identities=23% Similarity=0.348 Sum_probs=174.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+. .+.++.++.+|++|.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D~~~~ 69 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK----------------FGVRVLEVAVDVATP 69 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCTTSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh----------------cCCceEEEEcCCCCH
Confidence 4699999999999999999999999999999999999888887777552 135688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 70 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 146 (263)
T 3ai3_A 70 EGVDAVVESVRSSFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-GGGAIIHNASI-C 146 (263)
T ss_dssp HHHHHHHHHHHHHHSSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECch-h
Confidence 9999999999999999999999999876 4788899999999999999999999999999999876 47899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++|+.|++++||+||+|+||++.|++..
T Consensus 147 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 196 (263)
T 3ai3_A 147 AVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI 196 (263)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH
T ss_pred hcCCCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh
Confidence 77778888999999999999999999999999999999999999999853
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=307.27 Aligned_cols=242 Identities=21% Similarity=0.266 Sum_probs=194.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|+.+.. ...+..+.+|++|
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------------------~~~~~~~~~Dv~~ 64 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------------------VNVSDHFKIDVTN 64 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------------------TTSSEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------------------cCceeEEEecCCC
Confidence 4579999999999999999999999999999999987642 1245678999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||.
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~- 141 (269)
T 3vtz_A 65 EEEVKEAVEKTTKKYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIINIASV- 141 (269)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECch-
Confidence 99999999999999999999999999976 5788899999999999999999999999999999887 57999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhh-ccCCHHHHHHHHhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICELPETVARTLVPR 248 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~-~~~~pe~~a~~~~~~ 248 (347)
++..+.++...|++||+|+++|+++|+.|+++ ||+||+|+||+|+|++............... ...........++++
T Consensus 142 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 220 (269)
T 3vtz_A 142 QSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGR 220 (269)
T ss_dssp GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSS
T ss_pred hhccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCC
Confidence 67888889999999999999999999999998 8999999999999998643211000000000 000011122234556
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+..|++++..+.||+++...++++..+..+|++.
T Consensus 221 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 221 IGRPEEVAEVVAFLASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence 6677888888889998887666666666666553
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=300.50 Aligned_cols=233 Identities=22% Similarity=0.304 Sum_probs=170.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++ .+.++.++.+|++|.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 70 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA-----------------DGGTAISVAVDVSDP 70 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECCTTSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCH
Confidence 469999999999999999999999999999999999999988888876 456889999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCC--CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~--~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
++++++++++.++++++|+||||||+.. ...++.+.+.++|++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 71 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~ 149 (253)
T 3qiv_A 71 ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSST 149 (253)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC-
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCc
Confidence 9999999999999999999999999842 13567789999999999999999999999999999887 57999999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++. ++...|++||+|++.|+++|+.|+++.||+||+|+||+|+|++........ .. .......++.+
T Consensus 150 -~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~------~~~~~~~~~~~ 216 (253)
T 3qiv_A 150 -AAW---LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKE---MV------DDIVKGLPLSR 216 (253)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------------
T ss_pred -ccc---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHH---HH------HHHhccCCCCC
Confidence 343 456789999999999999999999999999999999999999764322110 00 01112223455
Q ss_pred hhhccccccceeeccchHHHHHHhhh
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTA 274 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~ 274 (347)
...|++++..+.|++++...++++..
T Consensus 217 ~~~~~dva~~~~~l~s~~~~~~tG~~ 242 (253)
T 3qiv_A 217 MGTPDDLVGMCLFLLSDEASWITGQI 242 (253)
T ss_dssp ---CCHHHHHHHHHHSGGGTTCCSCE
T ss_pred CCCHHHHHHHHHHHcCccccCCCCCE
Confidence 56677777777788776653333333
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-40 Score=296.17 Aligned_cols=190 Identities=25% Similarity=0.291 Sum_probs=160.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL--------------------GAAVRFRNADVTNE 65 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------------------CEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------------------CCceEEEEccCCCH
Confidence 4699999999999999999999999999999999998877766554 23678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-----CCCcE
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGH 161 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~----~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-----~~~g~ 161 (347)
++++++++++.+++|++|+||||||+... .++ .+.+.++|++++++|+.|++.++++++|+|+++ ++.|+
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~ 144 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTAPG-EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGV 144 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCC-CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeE
Confidence 99999999999999999999999998753 333 368899999999999999999999999999874 24789
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus 145 iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 204 (257)
T 3tpc_A 145 IVNTASI-AAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM 204 (257)
T ss_dssp EEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----
T ss_pred EEEEech-hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC
Confidence 9999998 67778888999999999999999999999999999999999999999987543
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=295.17 Aligned_cols=185 Identities=23% Similarity=0.291 Sum_probs=167.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..++ .+ +.++.+|++|.
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------------------~~--~~~~~~D~~~~ 61 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA--------------------VG--AHPVVMDVADP 61 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--------------------TT--CEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------------------cC--CEEEEecCCCH
Confidence 369999999999999999999999999999999998876654332 11 67789999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 62 ~~~~~~~~~~~~~~g~id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~-~ 138 (245)
T 1uls_A 62 ASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASR-V 138 (245)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEccc-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999876 47999999987 4
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
..+.++...|++||+++++|+++|+.|++++||+||+|+||+++|++...
T Consensus 139 -~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 188 (245)
T 1uls_A 139 -YLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK 188 (245)
T ss_dssp -GGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred -hcCCCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh
Confidence 66778889999999999999999999999999999999999999998643
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=301.57 Aligned_cols=190 Identities=24% Similarity=0.356 Sum_probs=171.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+ .+ ++.++.+|++|.
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~-~~~~~~~Dv~d~ 89 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-----------------YG-DCQAIPADLSSE 89 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-----------------SS-CEEECCCCTTSH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cC-ceEEEEeeCCCH
Confidence 469999999999999999999999999999999999888777776643 22 678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC---CcEEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK---GGHIFNMDG 167 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~---~g~Iv~vsS 167 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|++++. .++||++||
T Consensus 90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS 168 (276)
T 2b4q_A 90 AGARRLAQALGELSARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS 168 (276)
T ss_dssp HHHHHHHHHHHHHCSCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECC
Confidence 9999999999999999999999999876 477889999999999999999999999999999987632 189999999
Q ss_pred CCCCCCCCCCcc-hhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 168 AGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 168 ~~~~~~~~~~~~-~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
. ++..+.++.. .|++||+|++.|+++|+.|+++.||+||+|+||+++|++..
T Consensus 169 ~-~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 221 (276)
T 2b4q_A 169 V-AGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR 221 (276)
T ss_dssp G-GGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH
T ss_pred H-HHcCCCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh
Confidence 7 5667777777 99999999999999999999999999999999999999853
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=297.36 Aligned_cols=187 Identities=30% Similarity=0.394 Sum_probs=170.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 63 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------------------GDAARYQHLDVTIE 63 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------------------GGGEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEecCCCH
Confidence 3699999999999999999999999999999999988776655443 23578899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.|+||++||. +
T Consensus 64 ~~~~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 140 (254)
T 1hdc_A 64 EDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSA-A 140 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECch-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999876 47899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++|+.|++++||+||+|+||++.|++..
T Consensus 141 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 190 (254)
T 1hdc_A 141 GLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA 190 (254)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc
Confidence 77778889999999999999999999999999999999999999999854
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=302.12 Aligned_cols=228 Identities=21% Similarity=0.246 Sum_probs=192.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. .+.++.++.+|++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~ 72 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----------------NHENVVFHQLDVT 72 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------TCCSEEEEECCTT
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------CCCceEEEEccCC
Confidence 455799999999999999999999999999999999999999888888653 2347889999999
Q ss_pred CH-HHHHHHHHHHHhhcCCccEEEEcCCCCCC-----------------------------CCCCCCCCHHHHHHHHHhh
Q 019009 89 EP-ADVQKLSNFAVNEFGSIDIWINNAGTNKG-----------------------------FKPLLQFTNEEIEQIVSTN 138 (347)
Q Consensus 89 ~~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----------------------------~~~~~~~~~e~~~~~~~vN 138 (347)
|. ++++++++.+.+++++||+||||||+... ..++.+.+.+++++++++|
T Consensus 73 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N 152 (311)
T 3o26_A 73 DPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKIN 152 (311)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeee
Confidence 98 99999999999999999999999998631 1245577899999999999
Q ss_pred hhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCC-------------------------------------------
Q 019009 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------------------------------------------- 175 (347)
Q Consensus 139 ~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~------------------------------------------- 175 (347)
+.|++.++++++|+|+++ +.++||++||. ++..+.
T Consensus 153 ~~g~~~l~~~~~~~l~~~-~~~~IV~isS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 3o26_A 153 YNGVKSVTEVLIPLLQLS-DSPRIVNVSSS-TGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWP 230 (311)
T ss_dssp THHHHHHHHHHHHHHTTS-SSCEEEEECCG-GGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCC
T ss_pred eehHHHHHHHhhHhhccC-CCCeEEEEecC-CcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCc
Confidence 999999999999999877 57899999997 343321
Q ss_pred CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhcccc
Q 019009 176 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGS 255 (347)
Q Consensus 176 ~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~ 255 (347)
++...|++||+|+++|+++|+.|+.+ |+||+|+||+|+|+|..... ..+|+++++.++.....+++.
T Consensus 231 ~~~~~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~-----------~~~~~~~a~~~~~~~~~~~~~ 297 (311)
T 3o26_A 231 SFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIG-----------NYTAEEGAEHVVRIALFPDDG 297 (311)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTCC-----------SBCHHHHHHHHHHHHTCCSSC
T ss_pred ccchhhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCCC-----------CCCHHHHHHHHHHHHhCCCCC
Confidence 45678999999999999999999964 99999999999999864322 137999999999998888888
Q ss_pred ccceeeccchHH
Q 019009 256 GKAINYLTPPRI 267 (347)
Q Consensus 256 ~~~~~~l~~~~~ 267 (347)
.....|++++..
T Consensus 298 ~~g~~~~~s~~a 309 (311)
T 3o26_A 298 PSGFFYDCSELS 309 (311)
T ss_dssp CCSCEETC----
T ss_pred CCceEecccccc
Confidence 888888887654
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=293.82 Aligned_cols=216 Identities=25% Similarity=0.347 Sum_probs=176.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++. .++.++.+|++|.++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~Dv~~~~~ 60 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--------------------DNLYIAQLDVRNRAA 60 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------------------TTEEEEECCTTCHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------------CceEEEEcCCCCHHH
Confidence 689999999999999999999999999999999988776665541 357889999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. ++.
T Consensus 61 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~-~~~ 138 (248)
T 3asu_A 61 IEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGST-AGS 138 (248)
T ss_dssp HHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG-GGT
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccc-hhc
Confidence 9999999999999999999999986324678899999999999999999999999999999876 47899999998 677
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCccc-CcccccCcccch---hh-hhhhccCCHHHHHHHHhh
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQN---KQ-MFNIICELPETVARTLVP 247 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~-T~~~~~~~~~~~---~~-~~~~~~~~pe~~a~~~~~ 247 (347)
.+.++...|++||+++++|+++|+.|++++||+||+|+||+|+ |++......... .. .......+|+++|+.++.
T Consensus 139 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~ 218 (248)
T 3asu_A 139 WPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW 218 (248)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHH
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHH
Confidence 7888899999999999999999999999999999999999999 998542110000 01 111123478888887765
Q ss_pred hhh
Q 019009 248 RIR 250 (347)
Q Consensus 248 ~~~ 250 (347)
.+.
T Consensus 219 l~s 221 (248)
T 3asu_A 219 VST 221 (248)
T ss_dssp HHH
T ss_pred Hhc
Confidence 544
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=301.38 Aligned_cols=191 Identities=20% Similarity=0.205 Sum_probs=173.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.... .+.++.++.+|++|.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~ 70 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV---------------SGAQVDIVAGDIREP 70 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCeEEEEEccCCCH
Confidence 46999999999999999999999999999999999998888877775420 123688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++| +|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 71 ~~v~~~~~~~~~~~g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 146 (260)
T 2z1n_A 71 GDIDRLFEKARDLGG-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGSV-T 146 (260)
T ss_dssp HHHHHHHHHHHHTTC-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHhcC-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECch-h
Confidence 999999999999998 999999999876 4778899999999999999999999999999999876 47899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++|+.|++++||+||+|+||++.|++..
T Consensus 147 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 196 (260)
T 2z1n_A 147 LLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR 196 (260)
T ss_dssp GTSCCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence 77788889999999999999999999999999999999999999999864
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=301.13 Aligned_cols=243 Identities=22% Similarity=0.290 Sum_probs=189.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+...+...++.+. .+.++.++.+|++|.
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~~ 69 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD----------------VEERLQFVQADVTKK 69 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG----------------GGGGEEEEECCTTSH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh----------------cCCceEEEEecCCCH
Confidence 4699999999999999999999999999999988766543333332221 345789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCC--CCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~--~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
++++++++++.++++++|+||||||+ .. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.++||++||.
T Consensus 70 ~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~ 147 (264)
T 3i4f_A 70 EDLHKIVEEAMSHFGKIDFLINNAGPYVFE-RKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQ 147 (264)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCCCCCS-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccccC-CCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeec
Confidence 99999999999999999999999994 33 4678899999999999999999999999999999887 57999999987
Q ss_pred CCC-CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 169 GSG-GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 169 ~~~-~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
+.. ..+.++...|++||+|++.|+++|+.|+++.||+||+|+||+|.|++............ ....+++
T Consensus 148 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~----------~~~~p~~ 217 (264)
T 3i4f_A 148 GADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLK----------EHNTPIG 217 (264)
T ss_dssp TGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC------------------
T ss_pred hhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHH----------hhcCCCC
Confidence 433 66777889999999999999999999999999999999999999998654432111100 0112334
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++..|++++..+.||+++...++++..+..+|++
T Consensus 218 r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~ 251 (264)
T 3i4f_A 218 RSGTGEDIARTISFLCEDDSDMITGTIIEVTGAV 251 (264)
T ss_dssp CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSC
T ss_pred CCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCce
Confidence 4445555666666777766544445555554444
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=301.48 Aligned_cols=245 Identities=20% Similarity=0.234 Sum_probs=194.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCc---eeeEEecCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA---KVAGIACDV 87 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl 87 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+ .+. ++.++.+|+
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~~~~Dv 87 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK-----------------AGVPAEKINAVVADV 87 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCGGGEEEEECCT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCCCceEEEEecCC
Confidence 469999999999999999999999999999999999998888887765 223 688999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCC--CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
+|.++++++++++.+++|++|+||||||+.. ..+ +.+.+.++|++++++|+.|++.++++++|.|+++ + |+||++
T Consensus 88 ~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~-g~IV~i 164 (297)
T 1xhl_A 88 TEASGQDDIINTTLAKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-K-GEIVNV 164 (297)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-T-CEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-C-CEEEEE
Confidence 9999999999999999999999999999876 355 7889999999999999999999999999999876 3 899999
Q ss_pred cCCCCCCCCC-CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH--
Q 019009 166 DGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-- 242 (347)
Q Consensus 166 sS~~~~~~~~-~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-- 242 (347)
||. ++..+. ++...|++||+|++.|+++|+.|+++.||+||+|+||+|+|++............ . .++...
T Consensus 165 sS~-~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-~----~~~~~~~~ 238 (297)
T 1xhl_A 165 SSI-VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASD-K----LYSFIGSR 238 (297)
T ss_dssp CCG-GGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHH-H----HHHHHHHC
T ss_pred cCc-hhccCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccccccccc-c----hHHHHHHH
Confidence 997 566666 8889999999999999999999999999999999999999998643210000000 0 000000
Q ss_pred --HHHhhhhhhccccccceeeccchH-HHHHHhhhhhcCCcc
Q 019009 243 --RTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRW 281 (347)
Q Consensus 243 --~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 281 (347)
..+++++..|++++..+.||+++. ..++++..+..+|++
T Consensus 239 ~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~ 280 (297)
T 1xhl_A 239 KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS 280 (297)
T ss_dssp TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCc
Confidence 012334455666666667888776 544444444444443
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=303.13 Aligned_cols=190 Identities=27% Similarity=0.415 Sum_probs=174.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|+.|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~~~ 83 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-----------------AGVEADGRTCDVRSV 83 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEECCCCCH
Confidence 469999999999999999999999999999999999988888777765 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH--hHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~--l~~~~~~g~Iv~vsS~ 168 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|. |+++ +.|+||++||.
T Consensus 84 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-~~g~iv~isS~ 161 (277)
T 2rhc_B 84 PEIEALVAAVVERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIAST 161 (277)
T ss_dssp HHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-TEEEEEEECCG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-CCeEEEEECcc
Confidence 9999999999999999999999999876 477889999999999999999999999999999 8876 46899999997
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++..+.++...|++||++++.|+++|+.|+++.||+||+|+||++.|++..
T Consensus 162 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 212 (277)
T 2rhc_B 162 -GGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA 212 (277)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH
T ss_pred -ccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh
Confidence 677788888999999999999999999999999999999999999999853
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=303.55 Aligned_cols=243 Identities=16% Similarity=0.196 Sum_probs=188.9
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||+ +|||+++|++|+++|++|++++|+++ .++..+++.+. . ..+.++.+|++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~----------------~-~~~~~~~~Dl~ 81 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKG----------------F-GSDLVVKCDVS 81 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHH----------------T-TCCCEEECCTT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHh----------------c-CCeEEEEcCCC
Confidence 46999999999 99999999999999999999999985 45555565442 1 23678999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|++|+||||||+... ..++.+.+.++|++++++|+.|++.++++++|+|+++ +|+||++
T Consensus 82 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~i 159 (285)
T 2p91_A 82 LDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTL 159 (285)
T ss_dssp CHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEE
Confidence 9999999999999999999999999998642 1567789999999999999999999999999999754 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... . .... ......+
T Consensus 160 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~-~~~~------~~~~~~p 230 (285)
T 2p91_A 160 SYY-GAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF-H-LLME------HTTKVNP 230 (285)
T ss_dssp ECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH-H-HHHH------HHHHHST
T ss_pred ccc-hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch-H-HHHH------HHHhcCC
Confidence 997 57777888899999999999999999999999999999999999999985432110 0 0000 0001112
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+.+...|++++..+.|++++...+.++..+..+|++.
T Consensus 231 ~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~ 267 (285)
T 2p91_A 231 FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYH 267 (285)
T ss_dssp TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence 3334445555555667777655444454555555543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=285.41 Aligned_cols=216 Identities=22% Similarity=0.290 Sum_probs=185.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. .+.++.++.+|++|.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~~ 65 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE----------------QGVEVFYHHLDVSKAE 65 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCeEEEEEeccCCHH
Confidence 699999999999999999999999999999999999999888888643 3467899999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +++||+++|. .+
T Consensus 66 ~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~-~~ 141 (235)
T 3l77_A 66 SVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSD-VS 141 (235)
T ss_dssp HHHHHCC-HHHHHSSCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCG-GG
T ss_pred HHHHHHHHHHHhcCCCCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecc-hh
Confidence 999999999999999999999999977 5888999999999999999999999999999999553 6788888887 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|++||+|+++|+++|+. ...||+||+|+||+|+|++.......... ....+|+++|+.++..+..
T Consensus 142 ~~~~~~~~~Y~~sKaa~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~p~dva~~v~~l~~~ 215 (235)
T 3l77_A 142 ARLIPYGGGYVSTKWAARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSKPGKPKE----KGYLKPDEIAEAVRCLLKL 215 (235)
T ss_dssp SSCCTTCHHHHHHHHHHHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCCSCCCGG----GTCBCHHHHHHHHHHHHTS
T ss_pred cccCCCcchHHHHHHHHHHHHHHHhh--cCCCeEEEEEeCCccccccccccCCcccc----cCCCCHHHHHHHHHHHHcC
Confidence 77788889999999999999999944 46799999999999999987654332111 1234789999888766654
Q ss_pred cc
Q 019009 252 VK 253 (347)
Q Consensus 252 ~~ 253 (347)
+.
T Consensus 216 ~~ 217 (235)
T 3l77_A 216 PK 217 (235)
T ss_dssp CT
T ss_pred CC
Confidence 43
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=300.37 Aligned_cols=226 Identities=22% Similarity=0.353 Sum_probs=189.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... .+.++.++.+|++|.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl~~~ 71 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG---------------SGPEVMGVQLDVASR 71 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT---------------CGGGEEEEECCTTCH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---------------CCCeEEEEECCCCCH
Confidence 36999999999999999999999999999999999999999888887631 123788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-----CCCcEEEEE
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIFNM 165 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-----~~~g~Iv~v 165 (347)
++++++++.+.++++++|+||||||+.. ..++.+.+.+++++++++|+.|+++++++++|.|.++ ++.|+||++
T Consensus 72 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~i 150 (319)
T 3ioy_A 72 EGFKMAADEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNT 150 (319)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 9999999999999999999999999976 5889999999999999999999999999999999864 247899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh--------------hhh
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK--------------QMF 231 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~--------------~~~ 231 (347)
||. ++..+.++...|++||+|+++|+++|+.|+.+.||+|++|+||+|+|++.......... ...
T Consensus 151 sS~-a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (319)
T 3ioy_A 151 ASM-AAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLA 229 (319)
T ss_dssp CCG-GGTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------C
T ss_pred ccc-ccccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHH
Confidence 998 68888899999999999999999999999999999999999999999987543211100 000
Q ss_pred h--hccCCHHHHHHHHhhhhhhcc
Q 019009 232 N--IICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 232 ~--~~~~~pe~~a~~~~~~~~~~~ 253 (347)
. ....+|+++|+.++..+..++
T Consensus 230 ~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 230 GVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp CGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred HhhhcCCCHHHHHHHHHHHHHcCC
Confidence 0 011589999999998887643
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=302.51 Aligned_cols=240 Identities=17% Similarity=0.236 Sum_probs=194.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++ ..|+.+++++..+++.+ .+.++.++.+|++|
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~ 87 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVA-----------------NGGNGRLLSFDVAN 87 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----------------cCCceEEEEecCCC
Confidence 4699999999999999999999999999966 56788888888888766 44678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|.++.+.++||++||.
T Consensus 88 ~~~~~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~- 165 (267)
T 4iiu_A 88 REQCREVLEHEIAQHGAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSV- 165 (267)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCH-
T ss_pred HHHHHHHHHHHHHHhCCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcch-
Confidence 99999999999999999999999999987 4788899999999999999999999999999998743368999999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++...|++||+|++.|+++|+.|+++.||+|++|+||+|+|++........ . +.....++++.
T Consensus 166 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~----------~~~~~~p~~~~ 234 (267)
T 4iiu_A 166 SGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESAL-K----------EAMSMIPMKRM 234 (267)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHH-H----------HHHHTCTTCSC
T ss_pred HhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHH-H----------HHHhcCCCCCC
Confidence 677788889999999999999999999999999999999999999999875431110 0 01111123334
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
..|++++..+.||+++...++++..+..+|+
T Consensus 235 ~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 235 GQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 4455555555677776654444444444443
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=298.61 Aligned_cols=248 Identities=21% Similarity=0.221 Sum_probs=193.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+... ...++.++.+|++|.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dv~~~ 70 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--------------SEKQVNSVVADVTTE 70 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--------------CGGGEEEEECCTTSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCcceEEEEecCCCH
Confidence 369999999999999999999999999999999999988887777754100 012688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCC----CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP----LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~----~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++++++++++.+++|++|+||||||+.. ..+ +.+.+.++|++++++|+.+++.++++++|+|+++ + |+||++|
T Consensus 71 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~is 147 (280)
T 1xkq_A 71 DGQDQIINSTLKQFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-K-GEIVNVS 147 (280)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC-C-CcEEEec
Confidence 9999999999999999999999999875 355 7789999999999999999999999999999876 3 8999999
Q ss_pred CCCCCCCCC-CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH---
Q 019009 167 GAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA--- 242 (347)
Q Consensus 167 S~~~~~~~~-~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a--- 242 (347)
|. ++..+. ++...|++||+|++.|+++|+.|++++||+||+|+||+|+|++............ . .++...
T Consensus 148 S~-~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~----~~~~~~~~~ 221 (280)
T 1xkq_A 148 SI-VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQ-K----FYNFMASHK 221 (280)
T ss_dssp CG-GGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHH-H----HHHHHHHCT
T ss_pred Cc-cccCCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccccccccccc-c----hHHHHHHHH
Confidence 97 566666 8889999999999999999999999999999999999999998643210000000 0 000000
Q ss_pred -HHHhhhhhhccccccceeeccchH-HHHHHhhhhhcCCcc
Q 019009 243 -RTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRW 281 (347)
Q Consensus 243 -~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 281 (347)
..+++++..|++++..+.|++++. ..++++..+..+|++
T Consensus 222 ~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~ 262 (280)
T 1xkq_A 222 ECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGT 262 (280)
T ss_dssp TTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred cCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCc
Confidence 012334455566666666777765 544444444444443
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=299.23 Aligned_cols=190 Identities=21% Similarity=0.251 Sum_probs=168.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++|+. ++++++.+++.+. .+.++.++.+|++|
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~~ 85 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE----------------RSNTAVVCQADLTN 85 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh----------------cCCceEEEEeecCC
Confidence 469999999999999999999999999999999998 8888887777532 34578899999999
Q ss_pred ----HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCC-----CC-----CCHHHHHHHHHhhhhHHHHHHHHHHHHhHc
Q 019009 90 ----PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-----LQ-----FTNEEIEQIVSTNLVGSILCTREAMRVMRD 155 (347)
Q Consensus 90 ----~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-----~~-----~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~ 155 (347)
.++++++++++.+++|++|+||||||+.. ..++ .+ .+.++|++++++|+.+++.++++++|+|++
T Consensus 86 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 164 (288)
T 2x9g_A 86 SNVLPASCEEIINSCFRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKG 164 (288)
T ss_dssp STTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999876 3555 56 888999999999999999999999999987
Q ss_pred CCC-----CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 156 QPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 156 ~~~-----~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
++. .|+||++||. ++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|.|++
T Consensus 165 ~~~~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 165 TNPNCTSSNLSIVNLCDA-MVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp ------CCCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred cCCCCCCCCeEEEEEecc-cccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 621 6899999998 6777888899999999999999999999999999999999999999998
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=303.51 Aligned_cols=190 Identities=18% Similarity=0.207 Sum_probs=172.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|+.|+++|++|++++ |++++++++.+++... .+.++.++.+|++|
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~d 108 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR----------------RPNSAITVQADLSN 108 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh----------------cCCeEEEEEeeCCC
Confidence 469999999999999999999999999999999 9999988888877632 34578899999999
Q ss_pred HH-----------------HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCC--------------HHHHHHHHHhh
Q 019009 90 PA-----------------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT--------------NEEIEQIVSTN 138 (347)
Q Consensus 90 ~~-----------------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~--------------~e~~~~~~~vN 138 (347)
.+ +++++++++.+++|++|+||||||+.. ..++.+.+ .++|++++++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN 187 (328)
T 2qhx_A 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSN 187 (328)
T ss_dssp SCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHH
T ss_pred chhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHH
Confidence 99 999999999999999999999999876 46777888 99999999999
Q ss_pred hhHHHHHHHHHHHHhHcCCC-----CcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCc
Q 019009 139 LVGSILCTREAMRVMRDQPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM 213 (347)
Q Consensus 139 ~~g~~~l~~~~lp~l~~~~~-----~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~ 213 (347)
+.+++.++++++|+|++++. .|+||++||. ++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+
T Consensus 188 ~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~ 266 (328)
T 2qhx_A 188 AIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 266 (328)
T ss_dssp THHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECch-hhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence 99999999999999987621 6899999998 67778889999999999999999999999999999999999999
Q ss_pred ccCcc
Q 019009 214 VLTDL 218 (347)
Q Consensus 214 v~T~~ 218 (347)
|+|++
T Consensus 267 v~T~~ 271 (328)
T 2qhx_A 267 SVLVD 271 (328)
T ss_dssp BSCCC
T ss_pred ccCCc
Confidence 99998
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=301.10 Aligned_cols=196 Identities=28% Similarity=0.370 Sum_probs=169.1
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.++.+|++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++.+ .+.++.++.+|
T Consensus 22 ~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D 84 (272)
T 4e3z_A 22 SMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE-----------------SGGEAVAIPGD 84 (272)
T ss_dssp --CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred hccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh-----------------cCCcEEEEEcC
Confidence 34567999999999999999999999999999887 7888888888777765 45689999999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC--CCCcEEEE
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ--PKGGHIFN 164 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~--~~~g~Iv~ 164 (347)
++|.++++++++++.++++++|+||||||+.....++.+.+.+++++++++|+.|++.++++++|.|++. ++.|+||+
T Consensus 85 l~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~ 164 (272)
T 4e3z_A 85 VGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVN 164 (272)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 9999999999999999999999999999987634778899999999999999999999999999999762 24689999
Q ss_pred EcCCCCCCCCCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 165 MDGAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 165 vsS~~~~~~~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+||. ++..+.+ .+..|++||+|++.|+++|+.|+++.||+|++|+||+|+|++...
T Consensus 165 isS~-~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 221 (272)
T 4e3z_A 165 VSSM-AAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS 221 (272)
T ss_dssp ECCT-HHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred Ecch-HhccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence 9997 4544444 678899999999999999999999999999999999999998654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=293.85 Aligned_cols=188 Identities=28% Similarity=0.365 Sum_probs=170.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++ ++..+++.+ .+.++.++.+|++|.
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 63 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR-----------------HGVKAVHHPADLSDV 63 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT-----------------TSCCEEEECCCTTSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh-----------------cCCceEEEeCCCCCH
Confidence 3699999999999999999999999999999999876 444455543 345688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.++||++||. +
T Consensus 64 ~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 140 (255)
T 2q2v_A 64 AQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASV-H 140 (255)
T ss_dssp HHHHHHHHHHHHHHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcCc-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999887 47899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||+++++|+++|+.|++++||+||+|+||++.|++..
T Consensus 141 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 190 (255)
T 2q2v_A 141 GLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ 190 (255)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH
T ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh
Confidence 77778889999999999999999999999999999999999999999854
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=301.21 Aligned_cols=231 Identities=20% Similarity=0.220 Sum_probs=189.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+.++ ....+.+|++|.
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------------------~~~~~~~Dv~~~ 78 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------------------ADLHLPGDLREA 78 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------------------CSEECCCCTTSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------------------hhhccCcCCCCH
Confidence 4699999999999999999999999999999999876421 123458999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. +
T Consensus 79 ~~~~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~-~ 155 (266)
T 3uxy_A 79 AYADGLPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASC-W 155 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS-B
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCH-H
Confidence 9999999999999999999999999987 4788999999999999999999999999999999987 57999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH-----HH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR-----TL 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~-----~~ 245 (347)
+..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++....... ....+++..+ .+
T Consensus 156 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~p 227 (266)
T 3uxy_A 156 GLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAK--------RGFDPDRAVAELGRTVP 227 (266)
T ss_dssp TTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHH--------TTCCHHHHHHHHHTTST
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhc--------ccccchHHHHHHHhcCC
Confidence 8888899999999999999999999999999999999999999999985432110 0001111111 12
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
++++..|++++..+.||+++...++++..+..+|+
T Consensus 228 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 3uxy_A 228 LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG 262 (266)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence 34555667777777788887765544444444443
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=298.73 Aligned_cols=241 Identities=22% Similarity=0.240 Sum_probs=195.5
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHH-HHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.+|++|||||+ +|||+++|++|+++|++|++++|+.++. ++..+++.+. .+.++.++.+|+
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl 82 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT----------------YGIKAKAYKCQV 82 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH----------------HCCCEECCBCCT
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh----------------cCCceeEEecCC
Confidence 47999999999 9999999999999999999999987655 6667777653 246788999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.++++++++++.+++++||+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS 160 (267)
T 3gdg_A 83 DSYESCEKLVKDVVADFGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITAS 160 (267)
T ss_dssp TCHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCceEEEEcc
Confidence 9999999999999999999999999999987 4778899999999999999999999999999999887 4789999998
Q ss_pred CCCCCCCC--CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 168 AGSGGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 168 ~~~~~~~~--~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
. ++..+. ++...|++||+|++.|+++|+.|+++. |+||+|+||+|+|++...........+ ....+
T Consensus 161 ~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~----------~~~~~ 228 (267)
T 3gdg_A 161 M-SGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLW----------HSMIP 228 (267)
T ss_dssp G-GGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHHH----------HTTST
T ss_pred c-cccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHHH----------HhcCC
Confidence 7 444443 577899999999999999999999887 999999999999998654322111111 11122
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++...|++++..+.||+++...++++..+..+|++
T Consensus 229 ~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~ 264 (267)
T 3gdg_A 229 MGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGY 264 (267)
T ss_dssp TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred CCCCcCHHHHHhHhheeecCccccccCCEEEECCce
Confidence 344555666666667888776655555555555554
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=292.23 Aligned_cols=187 Identities=26% Similarity=0.355 Sum_probs=170.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++. .++.++.+|++|.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~D~~~~ 65 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--------------------DAARYVHLDVTQP 65 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--------------------GGEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--------------------cCceEEEecCCCH
Confidence 46999999999999999999999999999999999988776655442 2477889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|.|+++ +.|+||++||. +
T Consensus 66 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 142 (260)
T 1nff_A 66 AQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSI-E 142 (260)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeeh-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999876 47899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++|+.|++++||+||+|+||++.|++..
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 192 (260)
T 1nff_A 143 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD 192 (260)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred hcCCCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence 77778888999999999999999999999999999999999999999854
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=295.67 Aligned_cols=187 Identities=22% Similarity=0.253 Sum_probs=165.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++| ++++++++.+++++. .+.++.++.+|++|
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~ 73 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA----------------RAGSAVLCKGDLSL 73 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh----------------cCCceEEEeccCCC
Confidence 3699999999999999999999999999999999 988888888877652 14578899999999
Q ss_pred H----HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHHHHhH
Q 019009 90 P----ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-----------EEIEQIVSTNLVGSILCTREAMRVMR 154 (347)
Q Consensus 90 ~----~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-----------e~~~~~~~vN~~g~~~l~~~~lp~l~ 154 (347)
. ++++++++++.+++|++|+||||||+.. ..++.+.+. ++|++++++|+.+++.++++++|+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 152 (276)
T 1mxh_A 74 SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG 152 (276)
T ss_dssp STTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-
T ss_pred ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence 9 9999999999999999999999999876 467778888 99999999999999999999999997
Q ss_pred cCCCC------cEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 155 DQPKG------GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 155 ~~~~~------g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
+ +. ++||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||++.|+
T Consensus 153 -~-~~~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 153 -E-GGAWRSRNLSVVNLCDA-MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp --------CCCEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred -c-CCCCCCCCcEEEEECch-hhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 4 34 899999997 677788889999999999999999999999999999999999999998
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=305.39 Aligned_cols=245 Identities=18% Similarity=0.162 Sum_probs=191.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 78 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+++++..++++. .+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~ 71 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-----------------TGR 71 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-----------------TTS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh-----------------cCC
Confidence 46999999999999999999999999999999998 6667766666655 456
Q ss_pred eeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC
Q 019009 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK 158 (347)
Q Consensus 79 ~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~ 158 (347)
++.++.+|++|.++++++++++.+++|++|+||||||+... . .+.+.++|++++++|+.|+++++++++|+|. +
T Consensus 72 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~ 145 (287)
T 3pxx_A 72 KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPL-G--AHLPVQAFADAFDVDFVGVINTVHAALPYLT---S 145 (287)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC---T
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcc-c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh---c
Confidence 88999999999999999999999999999999999998652 3 3488899999999999999999999999993 4
Q ss_pred CcEEEEEcCCCCCCCCC-----------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch
Q 019009 159 GGHIFNMDGAGSGGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN 227 (347)
Q Consensus 159 ~g~Iv~vsS~~~~~~~~-----------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~ 227 (347)
+++||++||. ++..+. ++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......
T Consensus 146 ~g~iv~isS~-~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-- 222 (287)
T 3pxx_A 146 GASIITTGSV-AGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMY-- 222 (287)
T ss_dssp TCEEEEECCH-HHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHH--
T ss_pred CcEEEEeccc-hhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchh--
Confidence 6899999986 343332 56678999999999999999999999999999999999999986432110
Q ss_pred hhhhhh-ccCCHHHHHHH--Hh----hhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 228 KQMFNI-ICELPETVART--LV----PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 228 ~~~~~~-~~~~pe~~a~~--~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..+... ......+.... .. +++..|++++.++.||+++...++++..+..+|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~ 283 (287)
T 3pxx_A 223 RQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA 283 (287)
T ss_dssp HHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence 000000 00011111110 00 34455677777778999888766666666655554
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=294.35 Aligned_cols=218 Identities=25% Similarity=0.319 Sum_probs=179.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.. . .++.++.+|++|.++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~-~~~~~~~~Dv~d~~~ 83 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-----------------K-TRVLPLTLDVRDRAA 83 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-----------------T-SCEEEEECCTTCHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----------------C-CcEEEEEcCCCCHHH
Confidence 8999999999999999999999999999999999888877766632 1 368889999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCc-EEEEEcCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG-HIFNMDGAGSG 171 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g-~Iv~vsS~~~~ 171 (347)
++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|++.++++++|.|+++ +.| +||++||. ++
T Consensus 84 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS~-~~ 161 (272)
T 2nwq_A 84 MSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGSV-AG 161 (272)
T ss_dssp HHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECCG-GG
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCc-hh
Confidence 9999999999999999999999986523678899999999999999999999999999999876 356 99999997 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch---hh-hhhhccCCHHHHHHHHhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN---KQ-MFNIICELPETVARTLVP 247 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~---~~-~~~~~~~~pe~~a~~~~~ 247 (347)
..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++......... .. .......+|+++|+.++.
T Consensus 162 ~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~ 241 (272)
T 2nwq_A 162 KWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFW 241 (272)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHH
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHH
Confidence 77888889999999999999999999999999999999999999998643211000 00 111123578888888775
Q ss_pred hhh
Q 019009 248 RIR 250 (347)
Q Consensus 248 ~~~ 250 (347)
.+.
T Consensus 242 l~s 244 (272)
T 2nwq_A 242 IMN 244 (272)
T ss_dssp HHT
T ss_pred HhC
Confidence 554
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=298.50 Aligned_cols=249 Identities=19% Similarity=0.224 Sum_probs=184.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++..... .+.++.++.+|++|.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~D~~~~ 70 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV--------------SEQNVNSVVADVTTD 70 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTTSH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc--------------CCCceeEEecccCCH
Confidence 369999999999999999999999999999999999988887777643110 234688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCC----CHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF----TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~----~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++++++++++.+++|++|+||||||+.. ..++.+. +.++|++++++|+.|++.++++++|.|+++ +|+||++|
T Consensus 71 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~is 147 (278)
T 1spx_A 71 AGQDEILSTTLGKFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNIS 147 (278)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEe
Confidence 9999999999999999999999999876 3667777 999999999999999999999999999875 38999999
Q ss_pred CCCCC-CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-HHH
Q 019009 167 GAGSG-GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ART 244 (347)
Q Consensus 167 S~~~~-~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~ 244 (347)
|. ++ ..+.++...|++||++++.|+++|+.|++++||+||+|+||++.|++......... ....... ..+.. ...
T Consensus 148 S~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~-~~~~~~~~~ 224 (278)
T 1spx_A 148 SI-ASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEE-TSKKFYS-TMATMKECV 224 (278)
T ss_dssp CT-TSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HH-HHHHHHHHC
T ss_pred cc-cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCch-hhhhhhH-HHHHHHhcC
Confidence 98 45 77788889999999999999999999999999999999999999998643211000 0000000 00111 111
Q ss_pred HhhhhhhccccccceeeccchHHHH-HHhhhhhcCC
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILL-ALVTAWLRRG 279 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~ 279 (347)
++.+...|++++..+.|++++...+ .++..+..+|
T Consensus 225 p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdg 260 (278)
T 1spx_A 225 PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG 260 (278)
T ss_dssp TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred CCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECC
Confidence 2344556667777777887766533 3343443333
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=296.40 Aligned_cols=243 Identities=15% Similarity=0.131 Sum_probs=191.2
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||+ +|||+++|++|+++|++|++++|+.+..+. .+++.+.. ...++.++.+|++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~---------------~~~~~~~~~~D~~ 69 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKS-VHELAGTL---------------DRNDSIILPCDVT 69 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHTS---------------SSCCCEEEECCCS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHH-HHHHHHhc---------------CCCCceEEeCCCC
Confidence 46999999999 779999999999999999999999655443 33333321 1237889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.++++++|+||||||+..+ ..++.+.+.+++++++++|+.+++.++++++|+|++ +|+||++
T Consensus 70 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~i 146 (266)
T 3oig_A 70 NDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTL 146 (266)
T ss_dssp SSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEE
Confidence 9999999999999999999999999998642 266788999999999999999999999999999963 6899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ ... .......+
T Consensus 147 sS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~-------~~~~~~~~ 217 (266)
T 3oig_A 147 TYL-GGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFN-SIL-------KDIEERAP 217 (266)
T ss_dssp ECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH-HHH-------HHHHHHST
T ss_pred ecc-cccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchH-HHH-------HHHHhcCC
Confidence 998 688888999999999999999999999999999999999999999999865433210 000 01111222
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++...|++++..+.||+++...+.++..+..+|+|
T Consensus 218 ~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 253 (266)
T 3oig_A 218 LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253 (266)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCe
Confidence 334445555566666777766544555555555554
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=297.39 Aligned_cols=240 Identities=21% Similarity=0.223 Sum_probs=193.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+|++|||||++|||+++|++|+++|++|+++ .|+.+++++..+++.+ .+.++.++.+|++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~ 67 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-----------------NGGSAFSIGANLE 67 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH-----------------TTCEEEEEECCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-----------------cCCceEEEecCcC
Confidence 457999999999999999999999999999885 7788888888888866 4567899999999
Q ss_pred CHHHHHHHHHHHHhhcC------CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEE
Q 019009 89 EPADVQKLSNFAVNEFG------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 162 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g------~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~I 162 (347)
|.++++++++++.++++ ++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+ +.++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~i 143 (255)
T 3icc_A 68 SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSRI 143 (255)
T ss_dssp SHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEE
T ss_pred CHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC---CCCEE
Confidence 99999999999987764 4999999999976 57888999999999999999999999999999994 36899
Q ss_pred EEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH
Q 019009 163 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA 242 (347)
Q Consensus 163 v~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a 242 (347)
|++||. ++..+.|+...|++||+|+++|+++|+.|++++||+||+|+||+++|++........... .....
T Consensus 144 v~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--------~~~~~ 214 (255)
T 3icc_A 144 INISSA-ATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMK--------QYATT 214 (255)
T ss_dssp EEECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHH--------HHHHH
T ss_pred EEeCCh-hhccCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHH--------Hhhhc
Confidence 999998 678888999999999999999999999999999999999999999999875543211000 00011
Q ss_pred HHHhhhhhhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 243 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
...++++..|++++..+.||+++...++++..+..+|
T Consensus 215 ~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg 251 (255)
T 3icc_A 215 ISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG 251 (255)
T ss_dssp TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred cCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecC
Confidence 1123444555666666667777765444444443333
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=297.68 Aligned_cols=183 Identities=14% Similarity=0.189 Sum_probs=161.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++.+. +.+ ..+.++.+|++|.
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~-------------------~~~~~~~~Dv~~~ 83 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQ-------------------AGAVALYGDFSCE 83 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHH-------------------HTCEEEECCTTSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHh-------------------cCCeEEECCCCCH
Confidence 469999999999999999999999999999999998765433 322 1367899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+... .+ .+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||. +
T Consensus 84 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~-~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~-~ 159 (260)
T 3gem_A 84 TGIMAFIDLLKTQTSSLRAVVHNASEWLA-ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVADIVHISDD-V 159 (260)
T ss_dssp HHHHHHHHHHHHHCSCCSEEEECCCCCCC-CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCG-G
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCccCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECCh-h
Confidence 99999999999999999999999998752 33 677889999999999999999999999999987 57999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||+|+++|+++|+.|+++ +|+||+|+||++.|++..
T Consensus 160 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~ 208 (260)
T 3gem_A 160 TRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD 208 (260)
T ss_dssp GGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----
T ss_pred hcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC
Confidence 7788889999999999999999999999998 799999999999998753
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=294.60 Aligned_cols=189 Identities=22% Similarity=0.317 Sum_probs=164.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-----hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
+|++|||||++|||+++|++|+++|++|++++|+ .++++++.+.+.. .+.++.++.+|
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~-----------------~~~~~~~~~~D 67 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD-----------------NDVDLRTLELD 67 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHH-----------------HTCCEEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHh-----------------cCCcEEEEEee
Confidence 5899999999999999999999999999988776 4455555554443 34678999999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++|.++++++++++.+++|++|+||||||+.. ..++.+.+.+++++++++|+.|++.++++++|+|+++ +.|+||++|
T Consensus 68 vtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~is 145 (324)
T 3u9l_A 68 VQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWIS 145 (324)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEe
Confidence 99999999999999999999999999999876 5889999999999999999999999999999999887 579999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
|..+.....++...|++||+|+++|+++|+.|+++.||+|++|+||+|.|++.
T Consensus 146 S~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 146 SSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp CGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred cchhccCCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 98333345677889999999999999999999999999999999999997764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-40 Score=307.49 Aligned_cols=238 Identities=19% Similarity=0.207 Sum_probs=197.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----------hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS----------SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~----------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++.+ .+.++
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~ 88 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA-----------------AGGEA 88 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-----------------TTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh-----------------cCCcE
Confidence 46999999999999999999999999999999998 6778888888766 45688
Q ss_pred eEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC---
Q 019009 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--- 157 (347)
Q Consensus 81 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--- 157 (347)
.++.+|++|.++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|++.+
T Consensus 89 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~ 167 (322)
T 3qlj_A 89 VADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAG 167 (322)
T ss_dssp EEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccC
Confidence 99999999999999999999999999999999999987 47889999999999999999999999999999997531
Q ss_pred --CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhcc
Q 019009 158 --KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC 235 (347)
Q Consensus 158 --~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~ 235 (347)
.+|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+|| +.|++...........
T Consensus 168 ~~~~g~IV~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~------ 239 (322)
T 3qlj_A 168 KAVDGRIINTSSG-AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMAT------ 239 (322)
T ss_dssp CCCCEEEEEECCH-HHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----------
T ss_pred CCCCcEEEEEcCH-HHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhc------
Confidence 24799999987 5677788889999999999999999999999999999999999 9999865433211100
Q ss_pred CCHHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 236 ELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 236 ~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+ ....+...|++++..+.||+++...++++..+..+|++
T Consensus 240 --~-----~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 278 (322)
T 3qlj_A 240 --Q-----DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGK 278 (322)
T ss_dssp -----------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTE
T ss_pred --c-----ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 0 00012235677777888999888755555555555544
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=299.49 Aligned_cols=244 Identities=20% Similarity=0.254 Sum_probs=191.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.++ +++..+++.+ .+.++.++.+|++|
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~ 90 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-----------------NGSDAACVKANVGV 90 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH-----------------hCCCeEEEEcCCCC
Confidence 46999999999999999999999999999999999764 4555566654 34578899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|. +.|+||++||.
T Consensus 91 ~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~- 165 (283)
T 1g0o_A 91 VEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE---IGGRLILMGSI- 165 (283)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC---TTCEEEEECCG-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---cCCeEEEEech-
Confidence 99999999999999999999999999876 47788999999999999999999999999999992 46899999997
Q ss_pred CCCCCCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH---HH---
Q 019009 170 SGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET---VA--- 242 (347)
Q Consensus 170 ~~~~~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~---~a--- 242 (347)
++..+.+ ....|++||+++++|+++|+.|++++||+||+|+||+|+|++........ ........++. ..
T Consensus 166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (283)
T 1g0o_A 166 TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREY---IPNGENLSNEEVDEYAAVQ 242 (283)
T ss_dssp GGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGG---STTCTTCCHHHHHHHHHHH
T ss_pred hhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhc---cccccccCHHHHHHHHhhc
Confidence 4555554 48899999999999999999999999999999999999999854311000 00000001111 11
Q ss_pred HHHhhhhhhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 243 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
..+++++..|++++..+.||+++...++++..+..+|
T Consensus 243 ~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdg 279 (283)
T 1g0o_A 243 WSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG 279 (283)
T ss_dssp SCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 1233455667777777788888765444444444443
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=298.50 Aligned_cols=216 Identities=20% Similarity=0.318 Sum_probs=185.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-------HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.||++|||||++|||+++|++|+++|++|++++|+.++ +++..+++++ .+.++.++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-----------------~g~~~~~~ 106 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-----------------VGGKALPC 106 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-----------------TTCEEEEE
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-----------------cCCeEEEE
Confidence 46999999999999999999999999999999999875 5566666655 45689999
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.+|++|.++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||
T Consensus 107 ~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV 184 (346)
T 3kvo_A 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-KVAHIL 184 (346)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-SSCEEE
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCCEEE
Confidence 99999999999999999999999999999999987 5788999999999999999999999999999999887 579999
Q ss_pred EEcCCCCCCCC--CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCc-ccCcccccCcccchhhhhhhccCCHHH
Q 019009 164 NMDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM-VLTDLLLSGSTIQNKQMFNIICELPET 240 (347)
Q Consensus 164 ~vsS~~~~~~~--~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~~pe~ 240 (347)
++||. .+..+ .++...|++||+|++.|+++|+.|++ .||+||+|+||+ +.|++......... .....+|++
T Consensus 185 ~iSS~-~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~~~----~~r~~~ped 258 (346)
T 3kvo_A 185 NISPP-LNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGPGI----ESQCRKVDI 258 (346)
T ss_dssp EECCC-CCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC--C----GGGCBCTHH
T ss_pred EECCH-HHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccccc----cccCCCHHH
Confidence 99997 55555 67889999999999999999999999 899999999995 99987643221110 112237899
Q ss_pred HHHHHhhhhhh
Q 019009 241 VARTLVPRIRV 251 (347)
Q Consensus 241 ~a~~~~~~~~~ 251 (347)
+|+.++..+..
T Consensus 259 vA~~v~~L~s~ 269 (346)
T 3kvo_A 259 IADAAYSIFQK 269 (346)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHhc
Confidence 99888866654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=301.65 Aligned_cols=242 Identities=23% Similarity=0.301 Sum_probs=191.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ ..+.++.+|++|.
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~Dv~d~ 66 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---------------------PGAVFILCDVTQE 66 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------------------TTEEEEECCTTSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------------------cCCeEEEcCCCCH
Confidence 4699999999999999999999999999999999988776554432 1367899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.+++.++++++|+|+++ .|+||++||. +
T Consensus 67 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~-~ 143 (270)
T 1yde_A 67 DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSL-V 143 (270)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCH-H
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCc-c
Confidence 999999999999999999999999986534678899999999999999999999999999999764 5899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+++++|+++++.|++++||+||+|+||++.|++.............. ..+.....+++++.
T Consensus 144 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~----~~~~~~~~p~~r~~ 219 (270)
T 1yde_A 144 GAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRAS----IREGMLAQPLGRMG 219 (270)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHH----HHHHHHTSTTSSCB
T ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHH----HHHHhhcCCCCCCc
Confidence 66677888999999999999999999999999999999999999999853211000000000 00001122345566
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|++++..+.||+++ ..++++..+..+|++
T Consensus 220 ~p~dva~~v~~L~s~-~~~itG~~i~vdGG~ 249 (270)
T 1yde_A 220 QPAEVGAAAVFLASE-ANFCTGIELLVTGGA 249 (270)
T ss_dssp CHHHHHHHHHHHHHH-CTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHccc-CCCcCCCEEEECCCe
Confidence 677777777788876 344455555555543
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-40 Score=297.50 Aligned_cols=185 Identities=25% Similarity=0.333 Sum_probs=164.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ ..++.++.+|++|.
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 64 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL--------------------EAEAIAVVADVSDP 64 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--------------------CSSEEEEECCTTSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------cCceEEEEcCCCCH
Confidence 3699999999999999999999999999999999988776654433 23678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+| ++ .|+||++||. +
T Consensus 65 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~-~ 139 (263)
T 2a4k_A 65 KAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSV-A 139 (263)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCC-T
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecc-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999 53 6899999998 4
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+. +.++...|++||+++++|+++|+.|+++.||+||+|+||+|.|++...
T Consensus 140 ~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 189 (263)
T 2a4k_A 140 GL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG 189 (263)
T ss_dssp TC-CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred hc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence 55 677788999999999999999999999999999999999999998654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=298.44 Aligned_cols=241 Identities=11% Similarity=0.095 Sum_probs=192.1
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||+ +|||+++|++|+++|++|++++|+. .++..+++.+. ..++.++.+|++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~-----------------~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-----------------FNPAAVLPCDVI 85 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG-----------------GCCSEEEECCTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh-----------------cCCceEEEeecC
Confidence 36999999998 8899999999999999999999987 33445555442 235789999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~-~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
|.++++++++++.+++++||+||||||+... ..++.+ .+.+++++++++|+.+++.++++++|+|+++ .|+||+
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~ 163 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVA 163 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEE
Confidence 9999999999999999999999999998652 144455 8999999999999999999999999999865 689999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
+||. ++..+.++...|++||+|++.|+++|+.|++++||+||+|+||+|+|++........ ... .......
T Consensus 164 isS~-~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~------~~~~~~~ 234 (280)
T 3nrc_A 164 LTYI-GAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFK--KML------DYNAMVS 234 (280)
T ss_dssp EECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHH--HHH------HHHHHHS
T ss_pred Eecc-ccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchH--HHH------HHHHhcC
Confidence 9998 678888999999999999999999999999999999999999999999865433211 000 0111122
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
++++...|++++..+.||+++...++++..+..+|++
T Consensus 235 p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~ 271 (280)
T 3nrc_A 235 PLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGY 271 (280)
T ss_dssp TTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCc
Confidence 3344555666666667888876655555555555554
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=290.87 Aligned_cols=186 Identities=17% Similarity=0.222 Sum_probs=170.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 64 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--------------------GERSMFVRHDVSSE 64 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------------------CTTEEEECCCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCceEEEEccCCCH
Confidence 3699999999999999999999999999999999998877665554 23578899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ + ++||++||. +
T Consensus 65 ~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~-~ 140 (253)
T 1hxh_A 65 ADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASV-S 140 (253)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcch-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999876 3 999999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCC--CeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRS--KVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~--gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++++.|++++ ||+||+|+||++.|++..
T Consensus 141 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~ 192 (253)
T 1hxh_A 141 SWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192 (253)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH
T ss_pred hcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhh
Confidence 77788889999999999999999999999887 999999999999999854
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-40 Score=298.00 Aligned_cols=244 Identities=14% Similarity=0.115 Sum_probs=188.3
Q ss_pred cccCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 8 HWSCTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 8 ~~~~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
....+|++|||||+ +|||+++|++|+++|++|++++|+... ++..+++.+. ..++.++.+
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~-----------------~~~~~~~~~ 71 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAE-----------------FGSELVFPC 71 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHH-----------------TTCCCEEEC
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHH-----------------cCCcEEEEC
Confidence 34557999999999 999999999999999999999999543 3444455442 235788999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCC---CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~-~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
|++|.++++++++++.+++|+||+||||||+.... .++.+ .+.++|++++++|+.+++.++++++|+|++ +|+
T Consensus 72 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~ 148 (271)
T 3ek2_A 72 DVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DAS 148 (271)
T ss_dssp CTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEE
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---Cce
Confidence 99999999999999999999999999999986521 45555 999999999999999999999999999974 689
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ ... ....
T Consensus 149 iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~------~~~~ 219 (271)
T 3ek2_A 149 LLTLSYL-GAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFG--KIL------DFVE 219 (271)
T ss_dssp EEEEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHH--HHH------HHHH
T ss_pred EEEEecc-ccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchH--HHH------HHHH
Confidence 9999998 678888999999999999999999999999999999999999999999865432110 000 0111
Q ss_pred HHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 242 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 242 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
...++++...|++++..+.||+++...++++..+..+|++
T Consensus 220 ~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~ 259 (271)
T 3ek2_A 220 SNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGF 259 (271)
T ss_dssp HHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTG
T ss_pred hcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCe
Confidence 1223344555566666666787776655555555555554
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=293.22 Aligned_cols=184 Identities=23% Similarity=0.324 Sum_probs=167.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|++++ ++..+++ . + .++.+|++|.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-------------------~--~-~~~~~D~~~~ 61 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-------------------G--G-AFFQVDLEDE 61 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-------------------T--C-EEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-------------------h--C-CEEEeeCCCH
Confidence 36999999999999999999999999999999999876 5544433 1 3 6789999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 62 ~~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~-~ 138 (256)
T 2d1y_A 62 RERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASV-Q 138 (256)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccc-c
Confidence 9999999999999999999999999876 4778899999999999999999999999999999886 47999999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++++.|+++.||+||+|+||+++|++..
T Consensus 139 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 188 (256)
T 2d1y_A 139 GLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL 188 (256)
T ss_dssp GTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred ccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhh
Confidence 77788889999999999999999999999999999999999999999753
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=295.72 Aligned_cols=181 Identities=28% Similarity=0.366 Sum_probs=163.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.++. ...++.++.+|++|+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dv~d~ 80 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--------------------------ADPDIHTVAGDISKP 80 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC--------------------------SSTTEEEEESCTTSH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------------------------ccCceEEEEccCCCH
Confidence 469999999999999999999999999999999987542 123688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|.|+++ +.|+||++||. .
T Consensus 81 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~-~ 157 (260)
T 3un1_A 81 ETADRIVREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTS-L 157 (260)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCT-T
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEech-h
Confidence 9999999999999999999999999987 4788899999999999999999999999999999987 57999999987 3
Q ss_pred CC--CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GG--SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~--~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+. .+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus 158 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~ 209 (260)
T 3un1_A 158 VDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP 209 (260)
T ss_dssp TTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSC
T ss_pred hccCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCC
Confidence 33 344556899999999999999999999999999999999999999864
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=288.28 Aligned_cols=236 Identities=21% Similarity=0.305 Sum_probs=196.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..++ .+.++.++.+|++|.
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~Dv~~~ 63 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA--------------------YPDRAEAISLDVTDG 63 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH--------------------CTTTEEEEECCTTCH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------------------ccCCceEEEeeCCCH
Confidence 469999999999999999999999999999999999887665443 234688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|.|+++ +.++||++||. +
T Consensus 64 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS~-~ 140 (281)
T 3m1a_A 64 ERIDVVAADVLARYGRVDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISSF-G 140 (281)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcCc-c
Confidence 9999999999999999999999999876 4788899999999999999999999999999999887 47899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-------chhhh---hh-------h
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-------QNKQM---FN-------I 233 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-------~~~~~---~~-------~ 233 (347)
+..+.++...|++||+++++|+++|+.|++++||+||+|+||+|.|++....... ..... .. .
T Consensus 141 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (281)
T 3m1a_A 141 GQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGS 220 (281)
T ss_dssp GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC----
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCC
Confidence 7788889999999999999999999999999999999999999999986542211 00000 00 1
Q ss_pred ccCCHHHHHHHHhhhhhhccccccceeeccchHHHHHH
Q 019009 234 ICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLAL 271 (347)
Q Consensus 234 ~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 271 (347)
...+|+++|+.++..+..+.. ....++.++...+++
T Consensus 221 ~~~~~~dva~a~~~~~~~~~~--~~~~~l~s~~~~~i~ 256 (281)
T 3m1a_A 221 QPGDPAKAAAAIRLALDTEKT--PLRLALGGDAVDFLT 256 (281)
T ss_dssp -CBCHHHHHHHHHHHHHSSSC--CSEEEESHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCC--CeEEecCchHHHHHH
Confidence 124799999999887765432 335667776655443
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=294.89 Aligned_cols=188 Identities=23% Similarity=0.328 Sum_probs=169.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ ..++.++.+|++|.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~d~ 70 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL--------------------ENGGFAVEVDVTKR 70 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--------------------TTCCEEEECCTTCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--------------------hcCCeEEEEeCCCH
Confidence 4699999999999999999999999999999999988776554432 12577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++..++||++||. +
T Consensus 71 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~ 148 (263)
T 3ak4_A 71 ASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASL-A 148 (263)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccc-c
Confidence 9999999999999999999999999876 4778899999999999999999999999999999887336899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++++.|+++.||+||+|+||++.|++..
T Consensus 149 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 198 (263)
T 3ak4_A 149 AKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE 198 (263)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH
T ss_pred cccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh
Confidence 77778888999999999999999999999999999999999999999853
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=289.61 Aligned_cols=187 Identities=26% Similarity=0.302 Sum_probs=159.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.++.. ++ .+.++.++.+|++|.
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~--------------------~~~~~~~~~~D~~~~ 64 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---AD--------------------LGDRARFAAADVTDE 64 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HH--------------------TCTTEEEEECCTTCH
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hh--------------------cCCceEEEECCCCCH
Confidence 4699999999999999999999999999999999765432 11 235688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-------CCCc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-------PKGG 160 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-------~~~g 160 (347)
++++++++.+.+ +|++|+||||||+.... .+..+.+.++|++++++|+.+++.++++++|+|+++ ++.|
T Consensus 65 ~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g 143 (257)
T 3tl3_A 65 AAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERG 143 (257)
T ss_dssp HHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSE
T ss_pred HHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCc
Confidence 999999998877 89999999999986421 122358999999999999999999999999999872 2578
Q ss_pred EEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 161 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 161 ~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus 144 ~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 204 (257)
T 3tl3_A 144 VIINTASV-AAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL 204 (257)
T ss_dssp EEEEECCC-C--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---
T ss_pred EEEEEcch-hhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc
Confidence 99999998 67777888899999999999999999999999999999999999999987553
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=293.75 Aligned_cols=232 Identities=20% Similarity=0.269 Sum_probs=181.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~ 66 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS-----------------LGGQCVPVVCDSSQE 66 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------HSSEEEEEECCTTSH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----------------cCCceEEEECCCCCH
Confidence 369999999999999999999999999999999999998888887765 345788999999999
Q ss_pred HHHHHHHHHHHhh-cCCccEEEEcCC--CC----CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 91 ADVQKLSNFAVNE-FGSIDIWINNAG--TN----KGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 91 ~~v~~~~~~i~~~-~g~iD~li~nAG--~~----~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
++++++++.+.++ +|++|+|||||| +. ....++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||
T Consensus 67 ~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv 145 (260)
T 2qq5_A 67 SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIV 145 (260)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCEEE
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcEEE
Confidence 9999999999876 899999999995 32 013667888999999999999999999999999999876 478999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
++||. ++..+ +....|++||+|+++|+++|+.|++++||+||+|+||+|+|++............... .....
T Consensus 146 ~isS~-~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-----~~~~~ 218 (260)
T 2qq5_A 146 VISSP-GSLQY-MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPV-----LKQFK 218 (260)
T ss_dssp EECCG-GGTSC-CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC------------------------
T ss_pred EEcCh-hhcCC-CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhH-----HHHHH
Confidence 99987 44443 3457899999999999999999999999999999999999998643211100000000 00001
Q ss_pred HHhhhhhhccccccceeeccchHH
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRI 267 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~ 267 (347)
.++.+...|++++..+.||+++..
T Consensus 219 ~~~~~~~~pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 219 SAFSSAETTELSGKCVVALATDPN 242 (260)
T ss_dssp ---CHHHHHHHHHHHHHHHHTCTT
T ss_pred hhhccCCCHHHHHHHHHHHhcCcc
Confidence 223445567777777777777653
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=290.13 Aligned_cols=237 Identities=20% Similarity=0.228 Sum_probs=177.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++. ++ . .+.++.+|++|.
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-----------------~--~~~~~~~D~~d~ 58 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-----------------Y--PFATEVMDVADA 58 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-----------------C--SSEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-----------------C--CceEEEcCCCCH
Confidence 46999999999999999999999999999999998652 00 1 267889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 59 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~-~ 135 (250)
T 2fwm_X 59 AQVAQVCQRLLAETERLDALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASD-A 135 (250)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECch-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999876 47899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch--h-hhhhhccCCHHHHHHHHhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN--K-QMFNIICELPETVARTLVP 247 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~--~-~~~~~~~~~pe~~a~~~~~ 247 (347)
+..+.++...|++||++++.|+++|+.|+++.||+||+|+||+++|++......... . .+... ........++.
T Consensus 136 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~ 212 (250)
T 2fwm_X 136 AHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGF---GEQFKLGIPLG 212 (250)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------
T ss_pred hCCCCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhh---hhcccccCCCC
Confidence 777888899999999999999999999999999999999999999998643211000 0 00000 00000012344
Q ss_pred hhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+...|++++..+.|++++...++++..+..+|+
T Consensus 213 ~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 245 (250)
T 2fwm_X 213 KIARPQEIANTILFLASDLASHITLQDIVVDGG 245 (250)
T ss_dssp ---CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 556667777777777777654444444444443
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=284.39 Aligned_cols=179 Identities=24% Similarity=0.392 Sum_probs=155.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|++++++ .+..+.+|++|.
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------------------~~~~~~~D~~~~ 65 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------------------------GLFGVEVDVTDS 65 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------------------TSEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------------------------HhcCeeccCCCH
Confidence 4699999999999999999999999999999999876431 112488999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 66 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 142 (247)
T 1uzm_A 66 DAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSV-S 142 (247)
T ss_dssp HHHHHHHHHHHHHHSSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCC-C
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEECCH-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999887 47999999997 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||+|++.|+++|+.|++++||+||+|+||+++|++..
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 192 (247)
T 1uzm_A 143 GLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR 192 (247)
T ss_dssp C-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred hccCCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh
Confidence 77777888999999999999999999999999999999999999999864
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=287.62 Aligned_cols=180 Identities=24% Similarity=0.347 Sum_probs=162.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|+++++ .+++ + +..+.+|++| +
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~--------------------~--~~~~~~D~~~-~ 55 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL--------------------G--AVPLPTDLEK-D 55 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH--------------------T--CEEEECCTTT-S
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh--------------------C--cEEEecCCch-H
Confidence 58999999999999999999999999999999998752 2221 1 5678999999 9
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. ++
T Consensus 56 ~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~~ 132 (239)
T 2ekp_A 56 DPKGLVKRALEALGGLHVLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSV-TT 132 (239)
T ss_dssp CHHHHHHHHHHHHTSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-GG
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECch-hh
Confidence 999999999999999999999999876 4778899999999999999999999999999999876 47899999987 55
Q ss_pred CCCC--CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 172 GSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 172 ~~~~--~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
..+. ++...|++||++++.|+++|+.|++++||+||+|+||++.|++..
T Consensus 133 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 183 (239)
T 2ekp_A 133 FTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL 183 (239)
T ss_dssp TSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH
T ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh
Confidence 5555 788999999999999999999999999999999999999999854
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=305.46 Aligned_cols=227 Identities=13% Similarity=0.114 Sum_probs=187.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChhHHHH------------HHHHHHHHhhhhhhhcCCCCccccc
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLL-SGDRVVVASRSSESVRM------------TVTELEENLKEGMMAAGGSSKKNLV 76 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~-~G~~Vil~~R~~~~l~~------------~~~~l~~~~~~~~~~~~~~~~~~~~ 76 (347)
..+|++||||||+|||+++|+.|++ .|++|++++|+.+.+++ ..+++++ .
T Consensus 59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-----------------~ 121 (422)
T 3s8m_A 59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-----------------A 121 (422)
T ss_dssp SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-----------------T
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-----------------c
Confidence 3579999999999999999999999 99999999998765432 2244443 4
Q ss_pred CceeeEEecCCCCHHHHHHHHHHHHhhc-CCccEEEEcCCCC------------CCCCCC--------------------
Q 019009 77 HAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTN------------KGFKPL-------------------- 123 (347)
Q Consensus 77 ~~~~~~~~~Dls~~~~v~~~~~~i~~~~-g~iD~li~nAG~~------------~~~~~~-------------------- 123 (347)
+.++..+.+|++|.++++++++.+.++| |+||+||||||+. ....++
T Consensus 122 G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~ 201 (422)
T 3s8m_A 122 GLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQAS 201 (422)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccc
Confidence 5678899999999999999999999999 9999999999973 112344
Q ss_pred -CCCCHHHHHHHHHhhhhHHH-HHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCCCc--chhhhHHHHHHHHHHHHHhHh
Q 019009 124 -LQFTNEEIEQIVSTNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES 199 (347)
Q Consensus 124 -~~~~~e~~~~~~~vN~~g~~-~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~--~~Y~asKaal~~~~~~La~el 199 (347)
.+.+.++|++++++|..+.+ .+++++++.+..+ ++|+|||+||. ++..+.|.+ +.|++||+|+.+|+++|+.||
T Consensus 202 ~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~-~gG~IVniSSi-~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~El 279 (422)
T 3s8m_A 202 IEPASAQEIEDTITVMGGQDWELWIDALEGAGVLA-DGARSVAFSYI-GTEITWPIYWHGALGKAKVDLDRTAQRLNARL 279 (422)
T ss_dssp ECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE-EEEEEEEEEEC-CCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhh-CCCEEEEEeCc-hhhccCCCccchHHHHHHHHHHHHHHHHHHHh
Confidence 36899999999999999997 8888887653333 36899999998 566777766 899999999999999999999
Q ss_pred cCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHH--HHHHHHhhhhhhccccccceeeccchHH
Q 019009 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE--TVARTLVPRIRVVKGSGKAINYLTPPRI 267 (347)
Q Consensus 200 ~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe--~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 267 (347)
+++|||||+|+||+|.|++....+. .|. .....++++...|++++..+.||+++..
T Consensus 280 a~~GIRVNaVaPG~i~T~~~~~ip~------------~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l 337 (422)
T 3s8m_A 280 AKHGGGANVAVLKSVVTQASAAIPV------------MPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL 337 (422)
T ss_dssp HTTTCEEEEEEECCCCCTTGGGSTH------------HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CccCEEEEEEEcCCCcChhhhcCCC------------ChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh
Confidence 9999999999999999998644321 111 2234478999999999999999998864
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=276.62 Aligned_cols=215 Identities=25% Similarity=0.403 Sum_probs=188.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEe
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA 84 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (347)
+|++|||||++|||++++++|+++|+ +|++++|+++++++..+++.. .+.++.++.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~ 64 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-----------------EGALTDTIT 64 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-----------------TTCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc-----------------cCCeeeEEE
Confidence 58999999999999999999999999 999999999888877777654 345788999
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 85 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 85 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
+|++|.++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|+|+++ +.++||+
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~ 142 (244)
T 2bd0_A 65 ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFF 142 (244)
T ss_dssp CCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 9999999999999999999999999999999876 5778889999999999999999999999999999876 4789999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
+||. ++..+.++...|++||++++.|+++|+.|+++.||+|++|+||++.|++........ ......|+++|+.
T Consensus 143 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~~~dva~~ 216 (244)
T 2bd0_A 143 ITSV-AATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----QALMMMPEDIAAP 216 (244)
T ss_dssp ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----GGGSBCHHHHHHH
T ss_pred Eecc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----cccCCCHHHHHHH
Confidence 9987 677778888999999999999999999999999999999999999999865432111 1234579999998
Q ss_pred Hhhhhhh
Q 019009 245 LVPRIRV 251 (347)
Q Consensus 245 ~~~~~~~ 251 (347)
++..+..
T Consensus 217 ~~~l~~~ 223 (244)
T 2bd0_A 217 VVQAYLQ 223 (244)
T ss_dssp HHHHHTS
T ss_pred HHHHHhC
Confidence 8866654
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=279.69 Aligned_cols=210 Identities=18% Similarity=0.195 Sum_probs=170.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~~ 60 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL--------------------SNNVGYRARDLASHQ 60 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC--------------------SSCCCEEECCTTCHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--------------------hhccCeEeecCCCHH
Confidence 489999999999999999999999999999999998877665543 346788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.+. .|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|.|+++ +++||++||. ++
T Consensus 61 ~v~~~~~~~~~~---~d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~-~~ 133 (230)
T 3guy_A 61 EVEQLFEQLDSI---PSTVVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ--PVNVVMIMST-AA 133 (230)
T ss_dssp HHHHHHHSCSSC---CSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--CCEEEEECCG-GG
T ss_pred HHHHHHHHHhhc---CCEEEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEeec-cc
Confidence 999998876543 399999999877 5888899999999999999999999999999999876 3499999987 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|++||+|++.|+++|+.|++++||+||+|+||+|+|++........ ......+|+++|+.++..+..
T Consensus 134 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~dvA~~i~~l~~~ 209 (230)
T 3guy_A 134 QQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSL----DTSSFMSAEDAALMIHGALAN 209 (230)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------CCCHHHHHHHHHHHCCE
T ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCCC----CcccCCCHHHHHHHHHHHHhC
Confidence 7888999999999999999999999999999999999999999999875433211 112234789999888765543
Q ss_pred c
Q 019009 252 V 252 (347)
Q Consensus 252 ~ 252 (347)
+
T Consensus 210 ~ 210 (230)
T 3guy_A 210 I 210 (230)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=292.07 Aligned_cols=188 Identities=14% Similarity=0.162 Sum_probs=165.9
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||+ +|||+++|++|+++|++|++++|++ +.++..+++.+. . ....++.+|++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~----------------~-~~~~~~~~D~~ 69 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ----------------L-GSDIVLQCDVA 69 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHH----------------T-TCCCEEECCTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHh----------------c-CCcEEEEccCC
Confidence 46999999999 9999999999999999999999988 455555666442 1 23478899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~-~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
|.++++++++++.+++|++|+||||||+..+ ..++.+ .+.++|++++++|+.+++.++++++|+|++ +|+||+
T Consensus 70 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~ 146 (265)
T 1qsg_A 70 EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLT 146 (265)
T ss_dssp CHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEE
Confidence 9999999999999999999999999998642 145667 899999999999999999999999999963 589999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+||. ++..+.++...|++||+|++.|+++|+.|++++||+||+|+||+|+|++..
T Consensus 147 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 201 (265)
T 1qsg_A 147 LSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 201 (265)
T ss_dssp EECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGG
T ss_pred Ecch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhh
Confidence 9997 677778888999999999999999999999999999999999999999854
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=297.11 Aligned_cols=227 Identities=11% Similarity=0.046 Sum_probs=187.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChhHHH------------HHHHHHHHHhhhhhhhcCCCCccccc
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLL-SGDRVVVASRSSESVR------------MTVTELEENLKEGMMAAGGSSKKNLV 76 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~-~G~~Vil~~R~~~~l~------------~~~~~l~~~~~~~~~~~~~~~~~~~~ 76 (347)
..+|++|||||++|||+++|+.|++ +|++|++++|+.+..+ ...+++++ .
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-----------------~ 107 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-----------------K 107 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-----------------T
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-----------------c
Confidence 5689999999999999999999999 9999999998765432 12233433 4
Q ss_pred CceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCC------------CCCCC---------------------
Q 019009 77 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK------------GFKPL--------------------- 123 (347)
Q Consensus 77 ~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~------------~~~~~--------------------- 123 (347)
+.++..+.+|++|.++++++++++.++||+||+||||||+.. ...++
T Consensus 108 G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i 187 (405)
T 3zu3_A 108 GLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVL 187 (405)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEE
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccC
Confidence 567889999999999999999999999999999999999851 13454
Q ss_pred CCCCHHHHHHHHHhhhhHHH-HHHHHHHHH-hHcCCCCcEEEEEcCCCCCCCCCCCc--chhhhHHHHHHHHHHHHHhHh
Q 019009 124 LQFTNEEIEQIVSTNLVGSI-LCTREAMRV-MRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES 199 (347)
Q Consensus 124 ~~~~~e~~~~~~~vN~~g~~-~l~~~~lp~-l~~~~~~g~Iv~vsS~~~~~~~~~~~--~~Y~asKaal~~~~~~La~el 199 (347)
.+.+.|+|++++++|..+.+ .+++++++. |.+ ++|+|||+||. ++..+.|.+ +.|++||+|+++|+++|+.||
T Consensus 188 ~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~--~gG~IVniSSi-~~~~~~p~~~~~aY~AaKaal~~ltrsLA~El 264 (405)
T 3zu3_A 188 QPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLA--EGAQTTAFTYL-GEKITHDIYWNGSIGAAKKDLDQKVLAIRESL 264 (405)
T ss_dssp CCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEE--EEEEEEEEECC-CCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhh--CCcEEEEEeCc-hhhCcCCCccchHHHHHHHHHHHHHHHHHHHh
Confidence 77899999999999999998 788887764 544 36899999998 577778877 999999999999999999999
Q ss_pred cCC-CeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhccccccceeeccchH
Q 019009 200 KRS-KVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR 266 (347)
Q Consensus 200 ~~~-gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~ 266 (347)
+++ |||||+|+||+|.|++....+... ........++++...+++++..+.||+++.
T Consensus 265 a~~~GIRVNaVaPG~i~T~~s~~ip~~p----------~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd~ 322 (405)
T 3zu3_A 265 AAHGGGDARVSVLKAVVSQASSAIPMMP----------LYLSLLFKVMKEKGTHEGCIEQVYSLYKDS 322 (405)
T ss_dssp HTTTSCEEEEEECCCCCCHHHHTSTTHH----------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred CcccCeEEEEEEeCCCcCchhhcCCCCc----------HHHHHHHHHHhcCCCcHHHHHHHHHHHhcc
Confidence 999 999999999999999864432110 011233447899999999999999999884
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=287.24 Aligned_cols=179 Identities=27% Similarity=0.428 Sum_probs=158.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++ ..+.++.+|++|.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------------------~~~~~~~~Dl~d~ 71 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------------------EGFLAVKCDITDT 71 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------------------TTSEEEECCTTSH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------------------ccceEEEecCCCH
Confidence 469999999999999999999999999999999987542 1266789999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.|+||++||. +
T Consensus 72 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~-~ 148 (253)
T 2nm0_A 72 EQVEQAYKEIEETHGPVEVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSV-V 148 (253)
T ss_dssp HHHHHHHHHHHHHTCSCSEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCC-C
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECch-h
Confidence 9999999999999999999999999876 4778888999999999999999999999999999876 47899999997 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||+|++.|+++|+.|+++.||+||+|+||+|+|++..
T Consensus 149 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 198 (253)
T 2nm0_A 149 GLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK 198 (253)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh
Confidence 66677778899999999999999999999999999999999999999864
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=292.33 Aligned_cols=231 Identities=15% Similarity=0.142 Sum_probs=181.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-e--CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVA-S--RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~--R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
||++|||||++|||+++|++|+++|++|+++ + |+++++++..+++ . + +|+.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~------------------~-------~~~~ 54 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P------------------G-------TIAL 54 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T------------------T-------EEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C------------------C-------Cccc
Confidence 5899999999999999999999999999999 6 9988776655443 1 1 1233
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|++|+||||||+.. . .++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++
T Consensus 55 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~i 132 (244)
T 1zmo_A 55 AEQKPERLVDATLQHGEAIDTIVSNDYIPR-PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFI 132 (244)
T ss_dssp CCCCGGGHHHHHGGGSSCEEEEEECCCCCT-TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEE
Confidence 778888999999999999999999999876 4 678899999999999999999999999999999887 47999999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc---ccCcccchhhhhhhccCCHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL---LSGSTIQNKQMFNIICELPETVA 242 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~---~~~~~~~~~~~~~~~~~~pe~~a 242 (347)
||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++. ...... ... .+...
T Consensus 133 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~-------~~~~~ 202 (244)
T 1zmo_A 133 TSS-VGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN--PEL-------RERVD 202 (244)
T ss_dssp CCG-GGTSCCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC--HHH-------HHHHH
T ss_pred CCh-hhCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch--HHH-------HHHHh
Confidence 997 67778888999999999999999999999999999999999999999985 321100 000 00011
Q ss_pred -HHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 243 -RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 243 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
..++.++..|++++..+.||+++...++++..+..+|+
T Consensus 203 ~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 203 RDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp HHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred cCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence 12234445556666666677776554444444444443
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=291.68 Aligned_cols=188 Identities=19% Similarity=0.191 Sum_probs=166.4
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|++|||||+ +|||+++|++|+++|++|++++|+++ .++..+++.+. . ..+.++.+|++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~----------------~-~~~~~~~~D~~ 68 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA----------------L-GGALLFRADVT 68 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH----------------T-TCCEEEECCTT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh----------------c-CCcEEEECCCC
Confidence 46999999999 99999999999999999999999985 44455555442 1 23678999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++|++|+||||||+... ..++.+.+.++|++++++|+.++++++++++|+|++ +|+||++
T Consensus 69 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~i 145 (261)
T 2wyu_A 69 QDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTL 145 (261)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEE
Confidence 9999999999999999999999999998642 156788999999999999999999999999999963 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
||. ++..+.++...|++||+|++.|+++|+.|++++||+||+|+||+|.|++..
T Consensus 146 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 199 (261)
T 2wyu_A 146 TYY-ASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAAR 199 (261)
T ss_dssp ECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGG
T ss_pred ecc-cccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhh
Confidence 997 677778888999999999999999999999999999999999999999854
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=294.76 Aligned_cols=246 Identities=14% Similarity=0.109 Sum_probs=192.3
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChhHH-HHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 11 CTCRWFSVVS--TRGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 11 ~~k~vlITGa--s~GIG~aiA~~la~~G~~Vil~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.+|++||||| ++|||+++|++|+++|++|++++|+.++. ++..++ .+.++.++.+|+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~~Dv 65 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR--------------------LPAKAPLLELDV 65 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT--------------------SSSCCCEEECCT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh--------------------cCCCceEEEccC
Confidence 3699999999 99999999999999999999999998653 332221 234678899999
Q ss_pred CCHHHHHHHHHHHHhhcC---CccEEEEcCCCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCc
Q 019009 88 CEPADVQKLSNFAVNEFG---SIDIWINNAGTNKG----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG 160 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g---~iD~li~nAG~~~~----~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g 160 (347)
+|.++++++++++.+++| ++|+||||||+..+ ..++.+.+.++|++++++|+.+++.++++++|+|++ +|
T Consensus 66 ~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g 142 (269)
T 2h7i_A 66 QNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GG 142 (269)
T ss_dssp TCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CC
Confidence 999999999999999999 99999999998642 257788999999999999999999999999999964 47
Q ss_pred EEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-chhhhhhhccCCHH
Q 019009 161 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICELPE 239 (347)
Q Consensus 161 ~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-~~~~~~~~~~~~pe 239 (347)
+||++||.. . .+.+.+..|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... .............+
T Consensus 143 ~iv~iss~~-~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 220 (269)
T 2h7i_A 143 SIVGMDFDP-S-RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE 220 (269)
T ss_dssp EEEEEECCC-S-SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred eEEEEcCcc-c-cccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHH
Confidence 999999873 3 66788899999999999999999999999999999999999999975321000 00000000000001
Q ss_pred HH-HHHHhh-hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 240 TV-ARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 240 ~~-a~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.. ...+++ ++..|++++..+.||+++...++++..+..+|++
T Consensus 221 ~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 221 GWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp HHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred hhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 11 223445 5777888888889999887766666666666654
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=288.94 Aligned_cols=186 Identities=21% Similarity=0.349 Sum_probs=150.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .++.++.+|+++
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~D~~~ 71 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK--------------------DNYTIEVCNLAN 71 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------------------SSEEEEECCTTS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc--------------------cCccEEEcCCCC
Confidence 457999999999999999999999999999999999998877666542 367888999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++++++++ ++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.|+||++||.
T Consensus 72 ~~~~~~~~~~----~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~- 144 (249)
T 3f9i_A 72 KEECSNLISK----TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIINISSI- 144 (249)
T ss_dssp HHHHHHHHHT----CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC-
T ss_pred HHHHHHHHHh----cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEccH-
Confidence 9999887754 478999999999876 4677788999999999999999999999999999876 57899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus 145 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 197 (249)
T 3f9i_A 145 VGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL 197 (249)
T ss_dssp CC--CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C
T ss_pred HhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc
Confidence 67788899999999999999999999999999999999999999999986543
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=282.46 Aligned_cols=216 Identities=16% Similarity=0.163 Sum_probs=179.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dl~~~ 88 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--------------------GNRAEFVSTNVTSE 88 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCTTCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------------------CCceEEEEcCCCCH
Confidence 4699999999999999999999999999999999999888776665 24688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEc-CCCCCCCCCC-----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-----CCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINN-AGTNKGFKPL-----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKG 159 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~n-AG~~~~~~~~-----~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-----~~~ 159 (347)
++++++++++ ++++++|++||| ||+.. ..++ .+.+.++|++++++|+.+++.++++++|.|.+. ++.
T Consensus 89 ~~v~~~~~~~-~~~~~id~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~ 166 (281)
T 3ppi_A 89 DSVLAAIEAA-NQLGRLRYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGER 166 (281)
T ss_dssp HHHHHHHHHH-TTSSEEEEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCC
T ss_pred HHHHHHHHHH-HHhCCCCeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCC
Confidence 9999999999 888999999999 55544 2333 468899999999999999999999999999872 257
Q ss_pred cEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhh-----hc
Q 019009 160 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN-----II 234 (347)
Q Consensus 160 g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~-----~~ 234 (347)
|+||++||. ++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||+|+|++...........+.. ..
T Consensus 167 g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 245 (281)
T 3ppi_A 167 GALVLTASI-AGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKR 245 (281)
T ss_dssp EEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSS
T ss_pred eEEEEEecc-cccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCC
Confidence 899999998 688888999999999999999999999999999999999999999999876543221111111 11
Q ss_pred cCCHHHHHHHHhhhh
Q 019009 235 CELPETVARTLVPRI 249 (347)
Q Consensus 235 ~~~pe~~a~~~~~~~ 249 (347)
..+|+++|+.++..+
T Consensus 246 ~~~pedvA~~v~~l~ 260 (281)
T 3ppi_A 246 LGTPDEFADAAAFLL 260 (281)
T ss_dssp CBCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 125666666665433
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=281.08 Aligned_cols=191 Identities=23% Similarity=0.239 Sum_probs=169.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~---~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+|++|||||++|||+++|++|++ +|++|++++|+++++++..+++.+.. .+.++.++.+|++
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dv~ 70 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ---------------PDLKVVLAAADLG 70 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTSEEEEEECCTT
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC---------------CCCeEEEEecCCC
Confidence 59999999999999999999999 89999999999999988888876531 1357889999999
Q ss_pred CHHHHHHHHHHHHh--hcCCcc--EEEEcCCCCCCC-CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-CCCcE
Q 019009 89 EPADVQKLSNFAVN--EFGSID--IWINNAGTNKGF-KPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH 161 (347)
Q Consensus 89 ~~~~v~~~~~~i~~--~~g~iD--~li~nAG~~~~~-~~~~~-~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-~~~g~ 161 (347)
|.++++++++++.+ .+|++| +||||||+..+. .++.+ .+.++|++++++|+.|++.++++++|+|+++ ++.|+
T Consensus 71 ~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~ 150 (259)
T 1oaa_A 71 TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKT 150 (259)
T ss_dssp SHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred CHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCce
Confidence 99999999999988 678899 999999986421 45777 7899999999999999999999999999875 13689
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
||++||. ++..+.++...|++||+|+++|+++|+.|+++ |+||+|+||+++|++..
T Consensus 151 iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~ 206 (259)
T 1oaa_A 151 VVNISSL-CALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQ 206 (259)
T ss_dssp EEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHH
T ss_pred EEEEcCc-hhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHH
Confidence 9999998 67788889999999999999999999999974 99999999999999854
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=285.66 Aligned_cols=241 Identities=22% Similarity=0.298 Sum_probs=177.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 75 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-----------------KGFQVTGSVCDASLR 75 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeeEEEECCCCCH
Confidence 469999999999999999999999999999999999988888777765 345688899999999
Q ss_pred HHHHHHHHHHHhhc-CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.++||++||.
T Consensus 76 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~- 152 (266)
T 1xq1_A 76 PEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSI- 152 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC---
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEccc-
Confidence 99999999999999 89999999999876 4678889999999999999999999999999999876 47899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.+....|++||++++.|+++++.|+++.||+|++|+||++.|++...... .... .......++.+.
T Consensus 153 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~------~~~~~~~~~~~~ 223 (266)
T 1xq1_A 153 AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD---DEFK------KVVISRKPLGRF 223 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred hhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC---HHHH------HHHHhcCCCCCC
Confidence 5666778889999999999999999999999999999999999999998643211 0000 000112234456
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
..+++++..+.|++++...+.++..+..+|+
T Consensus 224 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 254 (266)
T 1xq1_A 224 GEPEEVSSLVAFLCMPAASYITGQTICVDGG 254 (266)
T ss_dssp CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred cCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence 6778888888888876553333434433443
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=280.95 Aligned_cols=217 Identities=21% Similarity=0.252 Sum_probs=188.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-----------------LGAKVHTFVVDCSNR 92 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh-----------------cCCeEEEEEeeCCCH
Confidence 469999999999999999999999999999999999988888777765 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||. +
T Consensus 93 ~~v~~~~~~~~~~~g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~-~ 169 (272)
T 1yb1_A 93 EDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASA-A 169 (272)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCC-C
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEech-h
Confidence 9999999999999999999999999876 4677888899999999999999999999999999887 47899999997 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhc---CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~---~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
+..+.++...|++||++++.|+++++.|+. +.||+|++|+||+++|++.... . .......+|+++|+.++.
T Consensus 170 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~----~--~~~~~~~~~~dva~~i~~ 243 (272)
T 1yb1_A 170 GHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----S--TSLGPTLEPEEVVNRLMH 243 (272)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----H--HHHCCCCCHHHHHHHHHH
T ss_pred hcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc----c--ccccCCCCHHHHHHHHHH
Confidence 666677788999999999999999999997 6799999999999999985321 0 111123589999999998
Q ss_pred hhhhcc
Q 019009 248 RIRVVK 253 (347)
Q Consensus 248 ~~~~~~ 253 (347)
.+..+.
T Consensus 244 ~~~~~~ 249 (272)
T 1yb1_A 244 GILTEQ 249 (272)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 887543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=279.68 Aligned_cols=190 Identities=26% Similarity=0.337 Sum_probs=171.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||++++++|+++|++|++++|+++++++..+++.+. .+.++.++.+|++|++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~~ 65 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA----------------YADKVLRVRADVADEG 65 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT----------------TGGGEEEEECCTTCHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCcEEEEEecCCCHH
Confidence 689999999999999999999999999999999998887766665211 2356889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCC---CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKP---LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~---~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++++++++.++++++|+||||||+.. ..+ +.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 66 ~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~ 143 (250)
T 2cfc_A 66 DVNAAIAATMEQFGAIDVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASV 143 (250)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCh
Confidence 999999999999999999999999865 344 7788999999999999999999999999999876 46899999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++..+.++...|++||++++.|+++++.|+++.||+|++|+||++.|++..
T Consensus 144 -~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 194 (250)
T 2cfc_A 144 -ASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194 (250)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTH
T ss_pred -hhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccc
Confidence 567777888999999999999999999999999999999999999999854
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=285.64 Aligned_cols=191 Identities=26% Similarity=0.388 Sum_probs=173.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||++++++|+++|++|++++| +++++++..+++.+ .+.++.++.+|++|
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~ 68 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-----------------VGGEAIAVKGDVTV 68 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECCTTS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-----------------cCCceEEEECCCCC
Confidence 3699999999999999999999999999999999 88777777777755 34578899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|++++..++||++||.
T Consensus 69 ~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~- 146 (261)
T 1gee_A 69 ESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSV- 146 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCH-
Confidence 99999999999999999999999999876 4677889999999999999999999999999999886336899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.+..+.++...|++||+|++.|+++++.|+++.||+|++|+||++.|++..
T Consensus 147 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 197 (261)
T 1gee_A 147 HEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA 197 (261)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH
T ss_pred HhcCCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh
Confidence 677778888999999999999999999999999999999999999999854
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=292.08 Aligned_cols=233 Identities=17% Similarity=0.167 Sum_probs=184.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLL-SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~-~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||++|||||++|||+++|++|++ .|++|++++|+++. ....+.++.+|++|
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~---------------------------~~~~~~~~~~Dv~~ 55 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------------------------SAENLKFIKADLTK 55 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC---------------------------CCTTEEEEECCTTC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc---------------------------ccccceEEecCcCC
Confidence 479999999999999999999999 78999999997652 12356889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++.+. ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ +|+||++||.
T Consensus 56 ~~~v~~~~~~~~--~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~~sS~- 128 (244)
T 4e4y_A 56 QQDITNVLDIIK--NVSFDGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSD- 128 (244)
T ss_dssp HHHHHHHHHHTT--TCCEEEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE---EEEEEEECCG-
T ss_pred HHHHHHHHHHHH--hCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc---CcEEEEECCH-
Confidence 999999996553 789999999999987 478899999999999999999999999999999975 3799999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHH-----HH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-----RT 244 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-----~~ 244 (347)
++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........... ....+++.. ..
T Consensus 129 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 204 (244)
T 4e4y_A 129 QCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANN----VGISFDEAQKQEEKEF 204 (244)
T ss_dssp GGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHH----HTCCHHHHHHHHHTTS
T ss_pred HHccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhh----cCCCHHHHHHHHhhcC
Confidence 678888999999999999999999999999999999999999999999864322110000 000111111 11
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+++++..|++++..+.||+++...++++..+..+|++
T Consensus 205 p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 241 (244)
T 4e4y_A 205 PLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGY 241 (244)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCc
Confidence 2344556677777777888877655555555555544
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=279.46 Aligned_cols=190 Identities=25% Similarity=0.437 Sum_probs=172.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
||++|||||++|||++++++|+++|++|++ .+|+++++++..+++++ .+.++.++.+|++|.
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~ 63 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-----------------YGGQAITFGGDVSKE 63 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------HTCEEEEEECCTTSH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEeCCCCCH
Confidence 589999999999999999999999999999 48998888877777765 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|+|+++ +.++||++||. +
T Consensus 64 ~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~ 140 (244)
T 1edo_A 64 ADVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASV-V 140 (244)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-H
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCh-h
Confidence 9999999999999999999999999876 4778889999999999999999999999999999876 47899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.++...|++||++++.|+++++.|+.+.||+|++|+||++.|++...
T Consensus 141 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (244)
T 1edo_A 141 GLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK 191 (244)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred hcCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh
Confidence 566778889999999999999999999999999999999999999998654
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=286.13 Aligned_cols=178 Identities=23% Similarity=0.344 Sum_probs=164.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|++++ +.++.++.+|++|.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------------------~~~~~~~~~Dl~~~ 58 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------------------EAKYDHIECDVTNP 58 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------------------SCSSEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------------------CCceEEEEecCCCH
Confidence 36999999999999999999999999999999998653 13577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|.|+++ +.|+||++||. +
T Consensus 59 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~ 135 (264)
T 2dtx_A 59 DQVKASIDHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-RDPSIVNISSV-Q 135 (264)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCc-h
Confidence 9999999999999999999999999876 5788899999999999999999999999999999876 47899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++|+.|+++. |+||+|+||+++|++..
T Consensus 136 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~ 184 (264)
T 2dtx_A 136 ASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVR 184 (264)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHH
T ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchh
Confidence 77788889999999999999999999999988 99999999999999854
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=290.24 Aligned_cols=178 Identities=16% Similarity=0.199 Sum_probs=157.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|+++++++..+ +++. +.++..+ |.+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~-----------------~~~~~~~-----d~~ 57 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-----------------YPQLKPM-----SEQ 57 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-----------------CTTSEEC-----CCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc-----------------CCcEEEE-----CHH
Confidence 4899999999999999999999999999999999988776654 5441 2233333 677
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. ++
T Consensus 58 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~ 135 (254)
T 1zmt_A 58 EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSA-TP 135 (254)
T ss_dssp SHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCS-TT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCc-cc
Confidence 88899999999999999999999987225788899999999999999999999999999999876 47899999998 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV 214 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v 214 (347)
..+.++...|++||+++++|+++|+.|++++||+||+|+||+|
T Consensus 136 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v 178 (254)
T 1zmt_A 136 FGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYL 178 (254)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSB
T ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcc
Confidence 7788889999999999999999999999999999999999999
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=282.02 Aligned_cols=191 Identities=22% Similarity=0.233 Sum_probs=172.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++ .+.++.++.+|++|.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~ 74 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-----------------EGHDVSSVVMDVTNT 74 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEecCCCH
Confidence 469999999999999999999999999999999999888877777765 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+..+..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++||++||. .
T Consensus 75 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~ 152 (260)
T 3awd_A 75 ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-KQGVIVAIGSM-S 152 (260)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEecc-h
Confidence 999999999999999999999999986534677889999999999999999999999999999876 47899999987 5
Q ss_pred CCCCCCCc--chhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLT--AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~--~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.+.. ..|++||++++.|+++++.|+++.||+|++|+||++.|++..
T Consensus 153 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 204 (260)
T 3awd_A 153 GLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR 204 (260)
T ss_dssp GTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred hcccCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence 66666666 899999999999999999999999999999999999999864
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-39 Score=287.62 Aligned_cols=232 Identities=19% Similarity=0.216 Sum_probs=180.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++.. ++ .++.++.+|++|.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~---------------------~~~~~~~~D~~~~ 62 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY---------------------PGIQTRVLDVTKK 62 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS---------------------TTEEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc---------------------cCceEEEeeCCCH
Confidence 3699999999999999999999999999999999987654322 11 1577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++++ +.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||. +
T Consensus 63 ~~~~~----~~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~ 135 (246)
T 2ag5_A 63 KQIDQ----FANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSV-A 135 (246)
T ss_dssp HHHHH----HHHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS-B
T ss_pred HHHHH----HHHHhCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEech-H
Confidence 99884 4456789999999999876 4778899999999999999999999999999999876 47899999997 5
Q ss_pred CCCCCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-----HHH
Q 019009 171 GGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----ART 244 (347)
Q Consensus 171 ~~~~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~~ 244 (347)
+..+.+ +...|++||++++.|+++|+.|++++||+||+|+||++.|++....... ...+++. ...
T Consensus 136 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~ 206 (246)
T 2ag5_A 136 SSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA---------RGNPEEARNDFLKRQ 206 (246)
T ss_dssp TTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH---------SSSHHHHHHHHHHTC
T ss_pred hCcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhc---------ccCcHHHHHHHHhcC
Confidence 666666 8889999999999999999999999999999999999999975321100 0001111 111
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+.++...|++++..+.|++++...++++..+..+|+
T Consensus 207 ~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG 242 (246)
T 2ag5_A 207 KTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG 242 (246)
T ss_dssp TTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 233445566666666777776654444444444443
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=304.83 Aligned_cols=262 Identities=14% Similarity=0.090 Sum_probs=194.2
Q ss_pred CCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|++|||||++ |||+++|++|+++|++|++++|++... ....-.+.... ..............+..+++|+++
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~--l~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~ 76 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN--IFMKNYKNGKF---DNDMIIDKDKKMNILDMLPFDASF 76 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHH--HHHHHHHTTTT---TGGGBCSSSCBCCEEEEEECCTTC
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCcccc--ccccchHHHHH---HHHHHHhhcccccccccccccccc
Confidence 69999999986 999999999999999999988876320 00000000000 000000000012347788999998
Q ss_pred H--H------------------HHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 019009 90 P--A------------------DVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTRE 148 (347)
Q Consensus 90 ~--~------------------~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~ 148 (347)
. + +++++++++.+++|+||+||||||+.. ...++.+.+.++|++++++|+.|++.++++
T Consensus 77 ~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 156 (329)
T 3lt0_A 77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKY 156 (329)
T ss_dssp SSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 8 8 999999999999999999999999742 357889999999999999999999999999
Q ss_pred HHHHhHcCCCCcEEEEEcCCCCCCCCCCCcc-hhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcccccCcccc
Q 019009 149 AMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQ 226 (347)
Q Consensus 149 ~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~~-~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~~~~~~~~~ 226 (347)
++|+|+++ |+||++||. ++..+.|+.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|+|........
T Consensus 157 ~~p~m~~~---g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~ 232 (329)
T 3lt0_A 157 FVNIMKPQ---SSIISLTYH-ASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN 232 (329)
T ss_dssp HGGGEEEE---EEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---
T ss_pred HHHHHhhC---CeEEEEeCc-cccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhc
Confidence 99999863 899999998 6788888885 9999999999999999999998 8999999999999999976542110
Q ss_pred hh-----------------hhhhhccCC-----------------HH-HHHHHHhhhhhhccccccceeeccchHHHHHH
Q 019009 227 NK-----------------QMFNIICEL-----------------PE-TVARTLVPRIRVVKGSGKAINYLTPPRILLAL 271 (347)
Q Consensus 227 ~~-----------------~~~~~~~~~-----------------pe-~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 271 (347)
.. ......... .+ .....+++++..|++++..+.||+++...+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~it 312 (329)
T 3lt0_A 233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAIT 312 (329)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred ccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhcccc
Confidence 00 000000000 01 11233456677888899999999999887777
Q ss_pred hhhhhcCCccc
Q 019009 272 VTAWLRRGRWF 282 (347)
Q Consensus 272 ~~~~~~~~~~~ 282 (347)
+..+..+|++.
T Consensus 313 G~~i~vdGG~~ 323 (329)
T 3lt0_A 313 GQTIYVDNGLN 323 (329)
T ss_dssp SCEEEESTTGG
T ss_pred CcEEEEcCCee
Confidence 77776666653
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=284.36 Aligned_cols=191 Identities=26% Similarity=0.365 Sum_probs=170.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|+.|+++|++|++++|+++++++..+++++ .+.++.++.+|++|.
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~d~ 105 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-----------------FGYESSGYAGDVSKK 105 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCceeEEECCCCCH
Confidence 469999999999999999999999999999999999888877777754 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+.++++|+||||||+.. ..++.+.+.+++++++++|+.|++.++++++|.|+++ +.++||++||. +
T Consensus 106 ~~v~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~-~ 182 (285)
T 2c07_A 106 EEISEVINKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSI-V 182 (285)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCT-H
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCh-h
Confidence 9999999999999999999999999876 4778899999999999999999999999999999876 46899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.++...|++||++++.|+++++.|+++.||+|++|+||++.|++...
T Consensus 183 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 233 (285)
T 2c07_A 183 GLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK 233 (285)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh
Confidence 666778889999999999999999999999999999999999999998654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=318.99 Aligned_cols=207 Identities=24% Similarity=0.277 Sum_probs=174.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---------hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS---------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~---------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
.||++|||||++|||+++|+.|+++|++|++++|+. ++++++.+++.+ .+.++
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~-----------------~g~~~- 68 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK-----------------NGGVA- 68 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHH-----------------TTCEE-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHh-----------------cCCeE-
Confidence 469999999999999999999999999999998765 667777777765 23333
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
.+|++|.++++++++++.++||+||+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ +.|+
T Consensus 69 --~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-~~G~ 144 (604)
T 2et6_A 69 --VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-KYGR 144 (604)
T ss_dssp --EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEE
T ss_pred --EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCE
Confidence 35888888899999999999999999999999976 5788999999999999999999999999999999887 4799
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
|||+||. ++..+.++...|++||+|+.+|+++|+.|++++||+||+|+|| +.|+|...... .... ....||++
T Consensus 145 IVnisS~-ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~---~~~~--~~~~pe~v 217 (604)
T 2et6_A 145 IVNTSSP-AGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP---PPML--EKLGPEKV 217 (604)
T ss_dssp EEEECCH-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC---HHHH--TTCSHHHH
T ss_pred EEEECCH-HHcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC---hhhh--ccCCHHHH
Confidence 9999997 6777888999999999999999999999999999999999998 68987543211 1111 12367777
Q ss_pred HHHHh
Q 019009 242 ARTLV 246 (347)
Q Consensus 242 a~~~~ 246 (347)
|..++
T Consensus 218 A~~v~ 222 (604)
T 2et6_A 218 APLVL 222 (604)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=282.83 Aligned_cols=229 Identities=21% Similarity=0.237 Sum_probs=184.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+.++.++..+++.+. .+.++.++.+|++|.
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~~~ 76 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE----------------FGVKTKAYQCDVSNT 76 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH----------------HTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh----------------cCCeeEEEEeeCCCH
Confidence 4689999999999999999999999999999999877776666666542 235688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|++++..++||++||. .
T Consensus 77 ~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~-~ 154 (265)
T 1h5q_A 77 DIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM-S 154 (265)
T ss_dssp HHHHHHHHHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCc-h
Confidence 9999999999999999999999999876 4778889999999999999999999999999999876445899999987 4
Q ss_pred CCCCCC-------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 171 GGSSTP-------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 171 ~~~~~~-------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
+..+.+ ....|++||++++.|+++++.|+++.||+|++|+||+|.|++............ ...
T Consensus 155 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~----------~~~ 224 (265)
T 1h5q_A 155 SQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQ----------ASN 224 (265)
T ss_dssp GTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHH----------HHT
T ss_pred hhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHH----------Hhc
Confidence 444332 267899999999999999999999999999999999999998654211100000 011
Q ss_pred HHhhhhhhccccccceeeccchHH
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRI 267 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~ 267 (347)
.++.++..+++++..+.|++++..
T Consensus 225 ~~~~~~~~~~dva~~~~~l~~~~~ 248 (265)
T 1h5q_A 225 IPLNRFAQPEEMTGQAILLLSDHA 248 (265)
T ss_dssp CTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred CcccCCCCHHHHHHHHHhhccCch
Confidence 123344566666666667766544
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=268.89 Aligned_cols=210 Identities=27% Similarity=0.349 Sum_probs=175.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||++++++|+++|++|++++|+++++++..+++ .++.++.+|++|.+
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~ 63 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---------------------EGALPLPGDVREEG 63 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------------------hhceEEEecCCCHH
Confidence 589999999999999999999999999999999988776554432 14678899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++.+.+.++++|+||||||+.. ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. .+
T Consensus 64 ~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~-~~ 140 (234)
T 2ehd_A 64 DWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSL-AG 140 (234)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCT-TT
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCc-hh
Confidence 999999999999999999999999876 4778889999999999999999999999999999886 47899999998 56
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|++||++++.|+++++.|+++.||+|++|+||+++|++...... .. . ..+|+++|+.++..+..
T Consensus 141 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~-~--~~~~~dvA~~~~~l~~~ 213 (234)
T 2ehd_A 141 KNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPG----QA-W--KLKPEDVAQAVLFALEM 213 (234)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------CCHHHHHHHHHHHHHS
T ss_pred cCCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccccc----cc-C--CCCHHHHHHHHHHHhCC
Confidence 77778889999999999999999999999999999999999999998643211 11 1 35899999999877665
Q ss_pred c
Q 019009 252 V 252 (347)
Q Consensus 252 ~ 252 (347)
+
T Consensus 214 ~ 214 (234)
T 2ehd_A 214 P 214 (234)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-39 Score=294.92 Aligned_cols=248 Identities=18% Similarity=0.188 Sum_probs=184.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dl~d~ 74 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM--------------------AGQVEVRELDLQDL 74 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS--------------------SSEEEEEECCTTCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------cCCeeEEEcCCCCH
Confidence 4699999999999999999999999999999999998877655443 35789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++ +++|+||||||+.. +..+.+.+++++++++|+.|++.++++++|+|++ +||++||. +
T Consensus 75 ~~v~~~~~~~----~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~-~ 141 (291)
T 3rd5_A 75 SSVRRFADGV----SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSM-A 141 (291)
T ss_dssp HHHHHHHHTC----CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCG-G
T ss_pred HHHHHHHHhc----CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeech-h
Confidence 9999988766 78999999999854 3456788999999999999999999999999864 69999987 3
Q ss_pred CCCC-------------CCCcchhhhHHHHHHHHHHHHHhHhcCCC--eEEEEeeCCcccCcccccCcccchhhhhh---
Q 019009 171 GGSS-------------TPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLLSGSTIQNKQMFN--- 232 (347)
Q Consensus 171 ~~~~-------------~~~~~~Y~asKaal~~~~~~La~el~~~g--I~v~~i~PG~v~T~~~~~~~~~~~~~~~~--- 232 (347)
+..+ .++...|++||+|++.|+++|+.|+++.| |+||+|+||+|+|++..............
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 221 (291)
T 3rd5_A 142 HWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAAT 221 (291)
T ss_dssp GTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------
T ss_pred hccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHH
Confidence 4322 35567899999999999999999999877 99999999999999976532211111110
Q ss_pred -hccCCHHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCccccc------CCccccccchhhhhhhccccc
Q 019009 233 -IICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD------QGRALYAAEADRIRNWAENRA 305 (347)
Q Consensus 233 -~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 305 (347)
....+|+++|+.++ |++++. +.++..+..+|++... ..........+++|+|+++..
T Consensus 222 ~~~~~~~~~~A~~~~--------------~l~~~~--~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~ 285 (291)
T 3rd5_A 222 RVVATDADFGARQTL--------------YAASQD--LPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLT 285 (291)
T ss_dssp ---CHHHHHHHHHHH--------------HHHHSC--CCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHH--------------HHHcCC--CCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 01112555555444 554442 3445555556655422 122345556778999987765
Q ss_pred cC
Q 019009 306 RF 307 (347)
Q Consensus 306 ~~ 307 (347)
..
T Consensus 286 ~~ 287 (291)
T 3rd5_A 286 KT 287 (291)
T ss_dssp TC
T ss_pred cc
Confidence 43
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=275.37 Aligned_cols=225 Identities=23% Similarity=0.358 Sum_probs=185.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|+.|+++|++|++++|+++++++..+++++.. ...++.++.+|++|.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~~~ 95 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG---------------YPGTLIPYRCDLSNE 95 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---------------CSSEEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC---------------CCceEEEEEecCCCH
Confidence 36999999999999999999999999999999999998888877776521 124688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-CcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~g~Iv~vsS~~ 169 (347)
++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++.++|.|++++. +++||++||.
T Consensus 96 ~~v~~~~~~~~~~~g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~- 173 (279)
T 1xg5_A 96 EDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSM- 173 (279)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCG-
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcCh-
Confidence 9999999999999999999999999876 477888999999999999999999999999999998632 4899999987
Q ss_pred CCC--CCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccccCcccchhh----hhhhccCCHHHH
Q 019009 170 SGG--SSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQ----MFNIICELPETV 241 (347)
Q Consensus 170 ~~~--~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~----~~~~~~~~pe~~ 241 (347)
.+. .+.++...|++||++++.|++.|+.|++ +.||+|++|+||+|.|++........... .......+|+++
T Consensus 174 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 253 (279)
T 1xg5_A 174 SGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDV 253 (279)
T ss_dssp GGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHH
T ss_pred hhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHH
Confidence 444 4667778999999999999999999998 88999999999999999843211111000 011123468888
Q ss_pred HHHHhhhhhhc
Q 019009 242 ARTLVPRIRVV 252 (347)
Q Consensus 242 a~~~~~~~~~~ 252 (347)
|+.++..+..+
T Consensus 254 A~~i~~l~~~~ 264 (279)
T 1xg5_A 254 AEAVIYVLSTP 264 (279)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHhcCC
Confidence 88777665543
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=276.25 Aligned_cols=191 Identities=24% Similarity=0.320 Sum_probs=171.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+++++++..+++.. ..++.++.+|++|.
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~D~~~~ 66 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------------------PDQIQFFQHDSSDE 66 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTTCH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------------------cCceEEEECCCCCH
Confidence 369999999999999999999999999999999999887766555421 14688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|++++.+++||++||. +
T Consensus 67 ~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~ 144 (251)
T 1zk4_A 67 DGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI-E 144 (251)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCc-h
Confidence 9999999999999999999999999876 4778889999999999999999999999999999876323899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.++...|++||++++.|+++++.|+. +.||+|++|+||++.|++...
T Consensus 145 ~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~ 197 (251)
T 1zk4_A 145 GFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD 197 (251)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT
T ss_pred hccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh
Confidence 677788889999999999999999999998 889999999999999998654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=280.04 Aligned_cols=199 Identities=22% Similarity=0.371 Sum_probs=175.7
Q ss_pred CCCCCCCcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 019009 1 MYSDNDEHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80 (347)
Q Consensus 1 ~~~~~~~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (347)
|.+.+...+ .+|++|||||++|||++++++|+++|++|++++|+++++++..++++. .+.++
T Consensus 1 m~~~~~~~~-~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~ 62 (255)
T 1fmc_A 1 MFNSDNLRL-DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQA 62 (255)
T ss_dssp CCCGGGGCC-TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCE
T ss_pred CCCccCCCC-CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH-----------------hCCce
Confidence 443333333 469999999999999999999999999999999999988887777765 34578
Q ss_pred eEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCc
Q 019009 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG 160 (347)
Q Consensus 81 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g 160 (347)
.++.+|++|.++++++++++.++++++|+||||||+.. ..++ +.+.+++++.+++|+.+++.++++++|.|+++ +.+
T Consensus 63 ~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~ 139 (255)
T 1fmc_A 63 FACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGG 139 (255)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCE
T ss_pred EEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCc
Confidence 88999999999999999999999999999999999876 3555 78899999999999999999999999999876 478
Q ss_pred EEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 161 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 161 ~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+||++||. ++..+.++...|++||++++.|++.++.|+++.||++++|+||++.|++...
T Consensus 140 ~iv~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~ 199 (255)
T 1fmc_A 140 VILTITSM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS 199 (255)
T ss_dssp EEEEECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred EEEEEcch-hhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh
Confidence 99999987 5667778889999999999999999999999999999999999999997643
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=279.98 Aligned_cols=199 Identities=19% Similarity=0.262 Sum_probs=169.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++++.... ......++.++.+|++|.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~D~~~~ 75 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSK----------EGPPRGNHAAFQADVSEA 75 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC----------------------CCEEEECCTTSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCcc----------ccccCcceEEEEecCCCH
Confidence 3699999999999999999999999999999999998887766655431100 000114678899999999
Q ss_pred HHHHHHHHHHHhhcCCc-cEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSI-DIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~i-D~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++.+.+++|++ |+||||||+.. ..++.+.+.+++++++++|+.|++.++++++|.|++++..++||++||.
T Consensus 76 ~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~- 153 (264)
T 2pd6_A 76 RAARCLLEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSI- 153 (264)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCT-
T ss_pred HHHHHHHHHHHHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECCh-
Confidence 99999999999999999 99999999876 4778889999999999999999999999999999876226899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
++..+.++...|++||++++.|++.++.|+++.||+|++|+||++.|++...
T Consensus 154 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 205 (264)
T 2pd6_A 154 VGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK 205 (264)
T ss_dssp HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred hhccCCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence 5666778889999999999999999999999999999999999999998643
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=316.89 Aligned_cols=227 Identities=22% Similarity=0.295 Sum_probs=182.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|+. ++++.+++++ .+.++..+.+|++
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~-----------------~g~~~~~~~~Dv~-- 379 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKA-----------------AGGEAWPDQHDVA-- 379 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHH-----------------TTCEEEEECCCHH--
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHh-----------------cCCeEEEEEcChH--
Confidence 469999999999999999999999999999998742 3455666655 3456777888884
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++.+++++++.++||+||+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ ++|+|||+||. +
T Consensus 380 ~~~~~~~~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~-a 456 (604)
T 2et6_A 380 KDSEAIIKNVIDKYGTIDILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITST-S 456 (604)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCH-H
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCh-h
Confidence 5567888999999999999999999976 5788999999999999999999999999999999887 57999999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||. .|+|....... .. ....
T Consensus 457 g~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~---~~----------------~~~~ 516 (604)
T 2et6_A 457 GIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE---QD----------------KNLY 516 (604)
T ss_dssp HHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------------CCSS
T ss_pred hccCCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch---hh----------------ccCC
Confidence 7778889999999999999999999999999999999999995 99985432110 00 0112
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|++++..+.||+++... +++..+..+|++.
T Consensus 517 ~pe~vA~~v~~L~s~~~~-itG~~~~vdGG~~ 547 (604)
T 2et6_A 517 HADQVAPLLVYLGTDDVP-VTGETFEIGGGWI 547 (604)
T ss_dssp CGGGTHHHHHHTTSTTCC-CCSCEEEEETTEE
T ss_pred CHHHHHHHHHHHhCCccC-CCCcEEEECCCee
Confidence 455566666677777655 5666666666543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=274.77 Aligned_cols=217 Identities=21% Similarity=0.216 Sum_probs=175.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~ 70 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--------------------GNNCVFAPADVTSE 70 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--------------------CTTEEEEECCTTCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--------------------CCceEEEEcCCCCH
Confidence 4699999999999999999999999999999999998877665554 23678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCC------CCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-----CC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL------QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-----KG 159 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~------~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-----~~ 159 (347)
++++++++++.++++++|+||||||+... .++. +.+.+++++++++|+.+++.++++++|+|+++. +.
T Consensus 71 ~~v~~~~~~~~~~~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~ 149 (265)
T 2o23_A 71 KDVQTALALAKGKFGRVDVAVNCAGIAVA-SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQR 149 (265)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCccCCC-CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCC
Confidence 99999999999999999999999998653 3333 378999999999999999999999999998752 36
Q ss_pred cEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhh-----hc
Q 019009 160 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN-----II 234 (347)
Q Consensus 160 g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~-----~~ 234 (347)
++||++||. .+..+.++...|++||++++.|+++|+.|+++.||+||+|+||+++|++.............. ..
T Consensus 150 ~~iv~isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 228 (265)
T 2o23_A 150 GVIINTASV-AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSR 228 (265)
T ss_dssp EEEEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCS
T ss_pred cEEEEeCCh-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCC
Confidence 899999987 566677888999999999999999999999999999999999999999865422111111111 11
Q ss_pred cCCHHHHHHHHhhhh
Q 019009 235 CELPETVARTLVPRI 249 (347)
Q Consensus 235 ~~~pe~~a~~~~~~~ 249 (347)
..+|+++|+.++..+
T Consensus 229 ~~~~~dva~~~~~l~ 243 (265)
T 2o23_A 229 LGDPAEYAHLVQAII 243 (265)
T ss_dssp CBCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 236777777766443
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-36 Score=275.41 Aligned_cols=218 Identities=19% Similarity=0.247 Sum_probs=186.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+. ...++.++.+|++|
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d 89 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL----------------GAASAHYIAGTMED 89 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------TCSEEEEEECCTTC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----------------CCCceEEEeCCCCC
Confidence 34799999999999999999999999999999999999988887777652 12368899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEc-CCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINN-AGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~n-AG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
.++++++++++.+++|++|+|||| ||+.. .++.+.+.+++++++++|+.|++.++++++|.|+++ .|+||++||.
T Consensus 90 ~~~v~~~~~~~~~~~g~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~ 165 (286)
T 1xu9_A 90 MTFAEQFVAQAGKLMGGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSL 165 (286)
T ss_dssp HHHHHHHHHHHHHHHTSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCc
Confidence 999999999999999999999999 57653 355567899999999999999999999999999764 5899999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHh--cCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el--~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~ 246 (347)
++..+.++...|++||++++.|+++|+.|+ ...||+|++|+||+++|++....... .......+|+++|+.++
T Consensus 166 -~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~vA~~i~ 240 (286)
T 1xu9_A 166 -AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----IVHMQAAPKEECALEII 240 (286)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG----GGGGGCBCHHHHHHHHH
T ss_pred -ccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc----cccCCCCCHHHHHHHHH
Confidence 677788889999999999999999999999 67899999999999999986432111 11123458999999999
Q ss_pred hhhhhc
Q 019009 247 PRIRVV 252 (347)
Q Consensus 247 ~~~~~~ 252 (347)
..+...
T Consensus 241 ~~~~~~ 246 (286)
T 1xu9_A 241 KGGALR 246 (286)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 887654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=275.19 Aligned_cols=190 Identities=23% Similarity=0.359 Sum_probs=171.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeE-EecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG-IACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dls~ 89 (347)
||+++||||++|||+++|++|+++|++|+++ +|+++++++..+++.. .+.++.. +.+|++|
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~~D~~~ 63 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR-----------------RGSPLVAVLGANLLE 63 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCSCEEEEECCTTS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEEeccCCC
Confidence 5899999999999999999999999999998 8999888877777755 2345666 8999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 64 ~~~~~~~~~~~~~~~~~~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~- 140 (245)
T 2ph3_A 64 AEAATALVHQAAEVLGGLDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSV- 140 (245)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeCh-
Confidence 99999999999999999999999999876 4778889999999999999999999999999999876 46899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
++..+.++...|++||++++.++++++.|+.+.||+|++|+||++.|++...
T Consensus 141 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 192 (245)
T 2ph3_A 141 VGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER 192 (245)
T ss_dssp HHHHCCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence 5556677889999999999999999999999899999999999999998654
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=290.98 Aligned_cols=186 Identities=27% Similarity=0.322 Sum_probs=165.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE---------eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVA---------SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~---------~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
.||++|||||++|||+++|++|+++|++|+++ +|+.+++++..+++.+ .+..
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~-----------------~~~~-- 68 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-----------------RGGK-- 68 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-----------------TTCE--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHh-----------------hCCe--
Confidence 46999999999999999999999999999996 5677888888888765 2222
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
..+|+++.++++++++++.++++++|+||||||+.. ..++.+.+.++|+.++++|+.|++.++++++|+|+++ +.++
T Consensus 69 -~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~gr 145 (319)
T 1gz6_A 69 -AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGR 145 (319)
T ss_dssp -EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEE
T ss_pred -EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCE
Confidence 347999999999999999999999999999999876 4678889999999999999999999999999999876 4789
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
||++||. ++..+.++...|++||+|++.|+++|+.|+++.||+||+|+||++ |++..
T Consensus 146 IV~vsS~-~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~ 202 (319)
T 1gz6_A 146 IIMTASA-SGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE 202 (319)
T ss_dssp EEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG
T ss_pred EEEECCh-hhccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc
Confidence 9999987 455667788999999999999999999999999999999999998 87643
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=278.37 Aligned_cols=186 Identities=25% Similarity=0.341 Sum_probs=167.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee-eEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV-AGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dls~ 89 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++. .++ .++.+|++|
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~~D~~~ 69 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG--------------------AAVAARIVADVTD 69 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------------------GGEEEEEECCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------------ccceeEEEEecCC
Confidence 46999999999999999999999999999999999988776665541 245 788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+ ++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 70 ~~~~~~~~~~~~~-~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~isS~- 145 (254)
T 2wsb_A 70 AEAMTAAAAEAEA-VAPVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAIVNLGSM- 145 (254)
T ss_dssp HHHHHHHHHHHHH-HSCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHh-hCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEecc-
Confidence 9999999999988 899999999999876 4778889999999999999999999999999999876 47899999987
Q ss_pred CCCCCCCCc--chhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SGGSSTPLT--AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~~~~~~~~--~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
.+..+.+.. ..|++||++++.++++++.|+++.||+|++|+||++.|++..
T Consensus 146 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~ 198 (254)
T 2wsb_A 146 SGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTL 198 (254)
T ss_dssp GGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH
T ss_pred hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhh
Confidence 566666666 899999999999999999999999999999999999999854
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=282.11 Aligned_cols=235 Identities=20% Similarity=0.226 Sum_probs=187.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..++++. .+.++.++.+|++|.
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~ 95 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-----------------YGVHSKAYKCNISDP 95 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH-----------------HCSCEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcceEEEeecCCH
Confidence 469999999999999999999999999999999998877776666654 235688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCC-CCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~-~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.++++++|+||||||+.....++. +.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||.
T Consensus 96 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~- 173 (279)
T 3ctm_A 96 KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSI- 173 (279)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCC-
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECch-
Confidence 9999999999999999999999999875225666 78899999999999999999999999999876 47899999997
Q ss_pred CCCCC--CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 170 SGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 170 ~~~~~--~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
++..+ .+....|++||++++.|+++++.|+++.| +||+|+||+++|++.......... ......+.+
T Consensus 174 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~----------~~~~~~p~~ 242 (279)
T 3ctm_A 174 SGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKA----------KWWQLTPLG 242 (279)
T ss_dssp TTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHH----------HHHHHSTTC
T ss_pred HhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHH----------HHHHhCCcc
Confidence 56555 67788999999999999999999999999 999999999999986321110000 001112234
Q ss_pred hhhhccccccceeeccchHHHHHHhhhh
Q 019009 248 RIRVVKGSGKAINYLTPPRILLALVTAW 275 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 275 (347)
+...+++++..+.|++++...+.++..+
T Consensus 243 ~~~~~~dvA~~~~~l~s~~~~~~tG~~i 270 (279)
T 3ctm_A 243 REGLTQELVGGYLYLASNASTFTTGSDV 270 (279)
T ss_dssp SCBCGGGTHHHHHHHHSGGGTTCCSCEE
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCEE
Confidence 4566777777777777765433333333
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=273.66 Aligned_cols=192 Identities=28% Similarity=0.392 Sum_probs=172.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||++|||++++++|+++|++|++++|+++++++..+++.+. .+.++.++.+|++|.
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~ 69 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK----------------YGVKAHGVEMNLLSE 69 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----------------HCCCEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh----------------cCCceEEEEccCCCH
Confidence 4699999999999999999999999999999999998888777776542 134688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++||++||. .
T Consensus 70 ~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~ 146 (248)
T 2pnf_A 70 ESINKAFEEIYNLVDGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSV-V 146 (248)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECCH-H
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccH-H
Confidence 9999999999999999999999999876 4677889999999999999999999999999999876 46899999986 4
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+..+.++...|++||++++.|+++++.|+++.||+|++|+||++.|++...
T Consensus 147 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~ 197 (248)
T 2pnf_A 147 GFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV 197 (248)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh
Confidence 555677889999999999999999999999899999999999999998643
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=277.62 Aligned_cols=228 Identities=21% Similarity=0.286 Sum_probs=186.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||++++++|+++|++|++++|+ ++++++..++++. .+.++.++.+|++|
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~ 68 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA-----------------DGGDAAFFAADLAT 68 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH-----------------TTCEEEEEECCTTS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh-----------------cCCceEEEECCCCC
Confidence 36999999999999999999999999999999999 8888877777765 34578899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCC-CCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC----CCcEEEE
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFN 164 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~-~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~----~~g~Iv~ 164 (347)
.++++++++++.++++++|+||||||+ .. ..++.+.+.+++++++++|+.+++.++++++|.|++++ ..++||+
T Consensus 69 ~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 147 (258)
T 3afn_B 69 SEACQQLVDEFVAKFGGIDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVIS 147 (258)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCcCC-cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEE
Confidence 999999999999999999999999998 44 57788899999999999999999999999999997641 1289999
Q ss_pred EcCCCCCCC-CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 165 MDGAGSGGS-STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 165 vsS~~~~~~-~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
+||. .+.. +.++...|++||++++.+++.++.|+++.||+|++|+||++.|++............. ..
T Consensus 148 ~sS~-~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~----------~~ 216 (258)
T 3afn_B 148 TGSI-AGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRIS----------NG 216 (258)
T ss_dssp ECCT-HHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHH----------TT
T ss_pred ecch-hhccCCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHh----------cc
Confidence 9987 4544 6778899999999999999999999999999999999999999986432110000000 01
Q ss_pred HHhhhhhhccccccceeeccchHH
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRI 267 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~ 267 (347)
.++.+...+++++..+.+++++..
T Consensus 217 ~~~~~~~~~~dva~~~~~l~~~~~ 240 (258)
T 3afn_B 217 IPMGRFGTAEEMAPAFLFFASHLA 240 (258)
T ss_dssp CTTCSCBCGGGTHHHHHHHHCHHH
T ss_pred CCCCcCCCHHHHHHHHHHHhCcch
Confidence 122344556666666667766554
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=287.37 Aligned_cols=226 Identities=18% Similarity=0.205 Sum_probs=178.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|+..++++..+.++..... ...+.++.++.+|++|.+
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~Dv~d~~ 70 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-----------ACPPGSLETLQLDVRDSK 70 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT-----------TCCTTSEEEEECCTTCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc-----------cCCCCceEEEEecCCCHH
Confidence 689999999999999999999999999999888765544443333321100 002356889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++ .++++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+++ +.|+||++||. ++
T Consensus 71 ~v~~~~~~~--~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~isS~-~~ 145 (327)
T 1jtv_A 71 SVAAARERV--TEGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSV-GG 145 (327)
T ss_dssp HHHHHHHTC--TTSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEG-GG
T ss_pred HHHHHHHHH--hcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCc-cc
Confidence 999999987 3589999999999876 5788899999999999999999999999999999876 47999999998 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch----------h----hh-------
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN----------K----QM------- 230 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~----------~----~~------- 230 (347)
..+.++...|++||++++.|+++|+.|++++||+||+|+||+|+|+|......... . ..
T Consensus 146 ~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (327)
T 1jtv_A 146 LMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV 225 (327)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHh
Confidence 77888899999999999999999999999999999999999999998654321100 0 00
Q ss_pred hhhccCCHHHHHHHHhhhhhhcc
Q 019009 231 FNIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 231 ~~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
......+|+++|+.++..+..++
T Consensus 226 ~~~~~~~pedvA~~i~~l~~~~~ 248 (327)
T 1jtv_A 226 FREAAQNPEEVAEVFLTALRAPK 248 (327)
T ss_dssp HHHHCBCHHHHHHHHHHHHHCSS
T ss_pred hhhcCCCHHHHHHHHHHHHcCCC
Confidence 00112479999999887776543
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=281.22 Aligned_cols=190 Identities=23% Similarity=0.290 Sum_probs=171.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. .+.++.++.+|++|.
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~~~ 88 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ----------------TGNKVHAIQCDVRDP 88 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCceEEEEeCCCCH
Confidence 4699999999999999999999999999999999999888888877653 135788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|+++.+.++||++||. .
T Consensus 89 ~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~-~ 166 (302)
T 1w6u_A 89 DMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI-Y 166 (302)
T ss_dssp HHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT-H
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccc-c
Confidence 9999999999999999999999999876 4778889999999999999999999999999999854457899999987 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
+..+.++...|++||++++.|+++++.|++++||+|++|+||++.|+.
T Consensus 167 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 214 (302)
T 1w6u_A 167 AETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 214 (302)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred cccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence 666778889999999999999999999999999999999999999983
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=270.12 Aligned_cols=191 Identities=30% Similarity=0.437 Sum_probs=153.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||++++++|+++|++|+++ .|+++++++..+++++ .+.++.++.+|++|
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~ 66 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA-----------------AGINVVVAKGDVKN 66 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHH-----------------TTCCEEEEESCTTS
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHh-----------------cCCcEEEEECCCCC
Confidence 36999999999999999999999999999999 6787777777777755 34578899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 67 ~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~- 143 (247)
T 2hq1_A 67 PEDVENMVKTAMDAFGRIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINITSI- 143 (247)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECC--
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCh-
Confidence 99999999999999999999999999876 4677788899999999999999999999999999876 47899999987
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
++..+.++...|++||++++.|+++++.|+++.||+||+|+||++.|++...
T Consensus 144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 195 (247)
T 2hq1_A 144 AGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV 195 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred hhccCCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence 5666778889999999999999999999999999999999999999997643
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-37 Score=297.73 Aligned_cols=238 Identities=17% Similarity=0.195 Sum_probs=186.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+... ++..+..++ ..+.++.||++|.
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~-------------------~~~~~~~~Dvtd~ 271 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK-------------------VGGTALTLDVTAD 271 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH-------------------HTCEEEECCTTST
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH-------------------cCCeEEEEecCCH
Confidence 57999999999999999999999999999999997532 122222221 1345789999999
Q ss_pred HHHHHHHHHHHhhcCC-ccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~-iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.+++++ ||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.++||++||.
T Consensus 272 ~~v~~~~~~~~~~~g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-~~g~iV~iSS~- 348 (454)
T 3u0b_A 272 DAVDKITAHVTEHHGGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGLSSM- 348 (454)
T ss_dssp THHHHHHHHHHHHSTTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-TTCEEEEECCH-
T ss_pred HHHHHHHHHHHHHcCCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEeCh-
Confidence 9999999999999986 999999999987 5788999999999999999999999999999999876 57899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.+++..|++||+++++|+++|+.|++++||+||+|+||+|+|+|.............. ...+.+.
T Consensus 349 a~~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~----------~~~l~r~ 418 (454)
T 3u0b_A 349 AGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRR----------LNSLFQG 418 (454)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHH----------SBTTSSC
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHh----------hccccCC
Confidence 677888999999999999999999999999999999999999999999865432211110000 0112334
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|++++..+.||+++...++++..+..+|++
T Consensus 419 g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 419 GQPVDVAELIAYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp BCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred CCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence 45566666667888887766666555555543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=273.18 Aligned_cols=191 Identities=25% Similarity=0.350 Sum_probs=169.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.. ..++.++.+|++|.
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~D~~~~ 76 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS------------------PDVISFVHCDVTKD 76 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTTCH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC------------------CCceEEEECCCCCH
Confidence 469999999999999999999999999999999998877665555421 12688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.++++++|+||||||+... ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 77 ~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~- 154 (278)
T 2bgk_A 77 EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASI- 154 (278)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCeEEEEeec-
Confidence 99999999999999999999999998642 2567889999999999999999999999999999876 47899999987
Q ss_pred CCCCCCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 170 SGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 170 ~~~~~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
.+..+.+ +...|++||++++.|+++++.|+++.||+|++|+||++.|++...
T Consensus 155 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 207 (278)
T 2bgk_A 155 SSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD 207 (278)
T ss_dssp GGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred cccCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhh
Confidence 5666666 778999999999999999999999999999999999999998654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=272.41 Aligned_cols=205 Identities=13% Similarity=0.040 Sum_probs=172.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+..+|++|||||++|||+++|++|+++|++|++++|++++++ ....++.+|++
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~D~~ 56 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------------------SASVIVKMTDS 56 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------------------SEEEECCCCSC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------------------CCcEEEEcCCC
Confidence 345799999999999999999999999999999999876421 13567899999
Q ss_pred CHHHHHHHHHHHHhhc--CCccEEEEcCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~-~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|.++++++++++.+++ +++|+||||||+.. ..++ .+.+.+++++++++|+.+++.++++++|+|++ +|+||++
T Consensus 57 ~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~i 132 (241)
T 1dhr_A 57 FTEQADQVTAEVGKLLGDQKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLA 132 (241)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEE
Confidence 9999999999999999 79999999999876 4666 78889999999999999999999999999964 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
||. ++..+.++...|++||+|++.|+++|+.|++ +.||+||+|+||+++|++....... ... ....+|+++|+
T Consensus 133 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~--~~~~~~~~vA~ 207 (241)
T 1dhr_A 133 GAK-AALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--ADF--SSWTPLEFLVE 207 (241)
T ss_dssp CCG-GGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--SCG--GGSEEHHHHHH
T ss_pred CCH-HHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc--hhh--ccCCCHHHHHH
Confidence 997 6777888899999999999999999999999 8999999999999999986432111 011 11235788888
Q ss_pred HHhhhh
Q 019009 244 TLVPRI 249 (347)
Q Consensus 244 ~~~~~~ 249 (347)
.++..+
T Consensus 208 ~v~~l~ 213 (241)
T 1dhr_A 208 TFHDWI 213 (241)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 776544
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=271.70 Aligned_cols=187 Identities=28% Similarity=0.378 Sum_probs=163.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+..+|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.. .+.++.++.+|++
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~D~~ 68 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF---------------EPQKTLFIQCDVA 68 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS---------------CGGGEEEEECCTT
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc---------------CCCceEEEecCCC
Confidence 3457999999999999999999999999999999999988877666664311 1346888999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMD 166 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vs 166 (347)
|.++++++++.+.+++|++|+||||||+.. .++|++.+++|+.+++.+++.++|+|++++ +.|+||++|
T Consensus 69 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (267)
T 2gdz_A 69 DQQQLRDTFRKVVDHFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 139 (267)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence 999999999999999999999999999742 256899999999999999999999998652 268999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHH--HhHhcCCCeEEEEeeCCcccCcccc
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASL--FKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~L--a~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
|. ++..+.++...|++||++++.|++++ +.|+++.||+||+|+||+++|++..
T Consensus 140 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~ 194 (267)
T 2gdz_A 140 SL-AGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE 194 (267)
T ss_dssp CG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH
T ss_pred Cc-cccCCCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhh
Confidence 97 67777888899999999999999995 6899999999999999999999854
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=278.86 Aligned_cols=192 Identities=26% Similarity=0.426 Sum_probs=171.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...... ..+.++.++.+|++|.
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~------------~~~~~~~~~~~D~~~~ 84 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP------------TKQARVIPIQCNIRNE 84 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT------------TCCCCEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc------------cCCccEEEEecCCCCH
Confidence 4699999999999999999999999999999999999988888887652110 0235788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.+.+++|++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.+.++ ..++||++||. +
T Consensus 85 ~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~-~ 161 (303)
T 1yxm_A 85 EEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVP-T 161 (303)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCC-C
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-cCCeEEEEEee-c
Confidence 9999999999999999999999999865 4778889999999999999999999999999976554 36899999987 4
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
..+.+....|+++|+++++|+++++.|+.+.||+|++|+||++.|++
T Consensus 162 -~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 162 -KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp -TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred -ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 66778889999999999999999999999999999999999999995
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-37 Score=273.84 Aligned_cols=215 Identities=17% Similarity=0.204 Sum_probs=153.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|++ |++|++++|+++++++..+ ..++.++.+|+++.
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------------------~~~~~~~~~D~~~~ 60 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------------------IEGVEPIESDIVKE 60 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------------------STTEEEEECCHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------------------hcCCcceecccchH
Confidence 369999999999999999999988 9999999999887654432 12477899999988
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++ .+.+.+..++++++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ +|+||++||. +
T Consensus 61 ~~-~~~~~~~~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~-~ 135 (245)
T 3e9n_A 61 VL-EEGGVDKLKNLDHVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINSG-A 135 (245)
T ss_dssp HH-TSSSCGGGTTCSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC----
T ss_pred HH-HHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEcCc-c
Confidence 77 4445555667899999999999977 4778889999999999999999999999999999875 4899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|++.|+++|+.|+++.||+||+|+||+|.|++...................|+++|+.++..+.
T Consensus 136 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~ 215 (245)
T 3e9n_A 136 GNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVID 215 (245)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHT
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHc
Confidence 77888899999999999999999999999999999999999999999876543322222222234579999999887776
Q ss_pred hcc
Q 019009 251 VVK 253 (347)
Q Consensus 251 ~~~ 253 (347)
.+.
T Consensus 216 ~~~ 218 (245)
T 3e9n_A 216 AGE 218 (245)
T ss_dssp SCT
T ss_pred CCC
Confidence 543
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-36 Score=267.37 Aligned_cols=202 Identities=14% Similarity=0.081 Sum_probs=172.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|++++++ ....++.+|++|.+
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~D~~~~~ 55 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------------------DSNILVDGNKNWTE 55 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------------------SEEEECCTTSCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------------------cccEEEeCCCCCHH
Confidence 589999999999999999999999999999999876421 23567789999999
Q ss_pred HHHHHHHHHHhhc--CCccEEEEcCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 92 DVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 92 ~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~-~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++++++++.+++ +++|+||||||+.. ..++ .+.+.++|++++++|+.+++.++++++|+|++ +|+||++||.
T Consensus 56 ~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~ 131 (236)
T 1ooe_A 56 QEQSILEQTASSLQGSQVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAA 131 (236)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG
T ss_pred HHHHHHHHHHHHhCCCCCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECch
Confidence 9999999999999 79999999999876 4666 78889999999999999999999999999964 5899999997
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~ 246 (347)
++..+.++...|++||+++++|+++|+.|++ +.||+||+|+||+++|++........ .. ....+|+++|+.++
T Consensus 132 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~--~~~~~~~dvA~~i~ 206 (236)
T 1ooe_A 132 -AAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA--DH--SSWTPLSFISEHLL 206 (236)
T ss_dssp -GGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC--CG--GGCBCHHHHHHHHH
T ss_pred -hhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCc--cc--cccCCHHHHHHHHH
Confidence 6777888899999999999999999999998 89999999999999999864321110 01 11246899998887
Q ss_pred hhh
Q 019009 247 PRI 249 (347)
Q Consensus 247 ~~~ 249 (347)
..+
T Consensus 207 ~~l 209 (236)
T 1ooe_A 207 KWT 209 (236)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-36 Score=268.49 Aligned_cols=204 Identities=12% Similarity=0.053 Sum_probs=173.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+++++ ....+.+|++|.
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------------------------~~~~~~~d~~d~ 71 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-----------------------------ADHSFTIKDSGE 71 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------------------SSEEEECSCSSH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------------------cccceEEEeCCH
Confidence 469999999999999999999999999999999987642 112478999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++++++|+||||||+.....++.+.+.+++++++++|+.|++.++++++|+|++ +|+||++||. +
T Consensus 72 ~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~-~ 147 (251)
T 3orf_A 72 EEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGAS-A 147 (251)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEech-h
Confidence 99999999999999999999999998763333778889999999999999999999999999965 5899999997 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+..+.++...|++||+|++.|+++|+.|++ +.||+||+|+||+|+|++......... .....+|+++|+.++..
T Consensus 148 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~dva~~i~~l 223 (251)
T 3orf_A 148 ALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDAN----FDDWTPLSEVAEKLFEW 223 (251)
T ss_dssp GGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTSC----GGGSBCHHHHHHHHHHH
T ss_pred hccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccccc----ccccCCHHHHHHHHHHH
Confidence 778888999999999999999999999987 889999999999999998643221111 11224789999988766
Q ss_pred hhh
Q 019009 249 IRV 251 (347)
Q Consensus 249 ~~~ 251 (347)
+..
T Consensus 224 ~~~ 226 (251)
T 3orf_A 224 STN 226 (251)
T ss_dssp HHC
T ss_pred hcC
Confidence 654
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=270.38 Aligned_cols=183 Identities=22% Similarity=0.330 Sum_probs=161.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+++++++..+++ ....++.+|++|.
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~~~~ 64 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---------------------PGIEPVCVDLGDW 64 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCTTCH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---------------------CCCCEEEEeCCCH
Confidence 4699999999999999999999999999999999988776554432 1244669999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++ +++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|++++..++||++||. .
T Consensus 65 ~~~~~~~~----~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~ 138 (244)
T 3d3w_A 65 EATERALG----SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ-C 138 (244)
T ss_dssp HHHHHHHT----TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-G
T ss_pred HHHHHHHH----HcCCCCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCch-h
Confidence 99988876 5689999999999876 4778889999999999999999999999999999876336899999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++++.|+++.||+|++|+||++.|++..
T Consensus 139 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~ 188 (244)
T 3d3w_A 139 SQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ 188 (244)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHH
T ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchh
Confidence 77777888999999999999999999999989999999999999999854
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=267.76 Aligned_cols=212 Identities=21% Similarity=0.297 Sum_probs=170.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+++||||++|||+++|++|+++|++ |++++|+++. +..+++.+.. .+.++.++.+|++|
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~---------------~~~~~~~~~~D~~~ 66 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAIN---------------PKVNITFHTYDVTV 66 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHC---------------TTSEEEEEECCTTS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhC---------------CCceEEEEEEecCC
Confidence 3699999999999999999999999996 9999998742 2334444321 13478899999999
Q ss_pred H-HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEc
Q 019009 90 P-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMD 166 (347)
Q Consensus 90 ~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vs 166 (347)
. ++++++++++.++++++|+||||||+. +.+++++++++|+.+++.++++++|.|++++ ..|+||++|
T Consensus 67 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is 137 (254)
T 1sby_A 67 PVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC 137 (254)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 8 999999999999999999999999973 2367899999999999999999999997652 158999999
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-----chhh-hhhhccCCHHH
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNKQ-MFNIICELPET 240 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-----~~~~-~~~~~~~~pe~ 240 (347)
|. ++..+.++...|++||++++.|+++|+.|+++.||+|++|+||+|+|++....... .... ....+..+|++
T Consensus 138 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 216 (254)
T 1sby_A 138 SV-TGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQ 216 (254)
T ss_dssp CG-GGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHH
T ss_pred ch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHH
Confidence 97 67778888999999999999999999999988899999999999999986542110 0000 11112236788
Q ss_pred HHHHHhhhh
Q 019009 241 VARTLVPRI 249 (347)
Q Consensus 241 ~a~~~~~~~ 249 (347)
+|+.++..+
T Consensus 217 vA~~i~~~~ 225 (254)
T 1sby_A 217 CGQNFVKAI 225 (254)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888776544
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=286.72 Aligned_cols=228 Identities=12% Similarity=0.060 Sum_probs=184.0
Q ss_pred cCCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCChhHH------------HHHHHHHHHHhhhhhhhcCCCCcccc
Q 019009 10 SCTCRWFSVVSTRGLGKA--LAREFLLSGDRVVVASRSSESV------------RMTVTELEENLKEGMMAAGGSSKKNL 75 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~a--iA~~la~~G~~Vil~~R~~~~l------------~~~~~~l~~~~~~~~~~~~~~~~~~~ 75 (347)
..||++|||||++|||++ +|+.|+++|++|++++|+.+.. +...+.+++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 120 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK----------------- 120 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH-----------------
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH-----------------
Confidence 568999999999999999 9999999999999999976532 222223332
Q ss_pred cCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCC------------CCCCC--------------------
Q 019009 76 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK------------GFKPL-------------------- 123 (347)
Q Consensus 76 ~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~------------~~~~~-------------------- 123 (347)
.+.++..+.+|++|.++++++++++.+++|+||+||||||+.. ...++
T Consensus 121 ~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~ 200 (418)
T 4eue_A 121 KGLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKK 200 (418)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEE
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccccccc
Confidence 4567889999999999999999999999999999999999851 12343
Q ss_pred -CCCCHHHHHHHHHhhhhHHH-HHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCCCc--chhhhHHHHHHHHHHHHHhHh
Q 019009 124 -LQFTNEEIEQIVSTNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES 199 (347)
Q Consensus 124 -~~~~~e~~~~~~~vN~~g~~-~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~--~~Y~asKaal~~~~~~La~el 199 (347)
.+.+.++|+.++++|..+.+ .+++++++.+..+ ++|+||++||. ++..+.|.+ +.|++||+|+++|+++|+.|+
T Consensus 201 ~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~-~gg~IV~iSSi-~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~EL 278 (418)
T 4eue_A 201 VSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFS-DKATTIAYSYI-GSPRTYKIYREGTIGIAKKDLEDKAKLINEKL 278 (418)
T ss_dssp ECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE-EEEEEEEEECC-CCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-CCcEEEEEeCc-hhcCCCCccccHHHHHHHHHHHHHHHHHHHHh
Confidence 46799999999999999998 7788877754443 47899999998 577778887 999999999999999999999
Q ss_pred cC-CCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhccccccceeeccchH
Q 019009 200 KR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR 266 (347)
Q Consensus 200 ~~-~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~ 266 (347)
++ +|||||+|+||+|.|++....+... .-......++++...++++...+.||+++.
T Consensus 279 a~~~GIrVN~V~PG~v~T~~s~~ip~~p----------~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~ 336 (418)
T 4eue_A 279 NRVIGGRAFVSVNKALVTKASAYIPTFP----------LYAAILYKVMKEKNIHENCIMQIERMFSEK 336 (418)
T ss_dssp HHHHSCEEEEEECCCCCCHHHHTSTTHH----------HHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred CCccCeEEEEEECCcCcChhhhcCCCCc----------HHHHHHHHHHhhcCChHHHHHHHHHHhhcc
Confidence 99 9999999999999999864432110 011223346777888888888888888774
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=286.74 Aligned_cols=250 Identities=17% Similarity=0.147 Sum_probs=155.6
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCh-----------hHHHH-----------HHHHHHHHhhhhhhh
Q 019009 11 CTCRWFSVVS--TRGLGKALAREFLLSGDRVVVASRSS-----------ESVRM-----------TVTELEENLKEGMMA 66 (347)
Q Consensus 11 ~~k~vlITGa--s~GIG~aiA~~la~~G~~Vil~~R~~-----------~~l~~-----------~~~~l~~~~~~~~~~ 66 (347)
.+|++||||| ++|||+++|+.|+++|++|++++|++ +++++ +.+++++...
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 82 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV----- 82 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------------
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc-----
Confidence 4699999999 89999999999999999999998763 22221 1122211000
Q ss_pred cCCCCcccccCceeeEEec------------CCCC--------HHHHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCC
Q 019009 67 AGGSSKKNLVHAKVAGIAC------------DVCE--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQ 125 (347)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~------------Dls~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~ 125 (347)
.......+.+ |++| .++++++++++.+++|+||+||||||+.. ...++.+
T Consensus 83 ---------~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~ 153 (319)
T 2ptg_A 83 ---------DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQ 153 (319)
T ss_dssp -----------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGG
T ss_pred ---------cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCcccc
Confidence 0000123333 3333 45899999999999999999999999753 2467889
Q ss_pred CCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCCCc-chhhhHHHHHHHHHHHHHhHhcC-CC
Q 019009 126 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SK 203 (347)
Q Consensus 126 ~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~-~~Y~asKaal~~~~~~La~el~~-~g 203 (347)
.+.++|++++++|+.|+++++++++|+|++ +|+||++||. ++..+.++. ..|++||+|+++|+++|+.|+++ +|
T Consensus 154 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~g 229 (319)
T 2ptg_A 154 TSRKGYLAAVSSSSYSFVSLLQHFLPLMKE---GGSALALSYI-ASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARA 229 (319)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEEC-C------------------THHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHhHhhHHHHHHHHHHHHHHhc---CceEEEEecc-ccccccCccchhhHHHHHHHHHHHHHHHHHhccccC
Confidence 999999999999999999999999999975 4899999998 566777777 68999999999999999999985 89
Q ss_pred eEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH-HHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 204 VGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 204 I~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
|+||+|+||+|+|+|.............. ...+. ....+++++..|++++..+.||+++...++++..+..+|++
T Consensus 230 Irvn~v~PG~v~T~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 305 (319)
T 2ptg_A 230 VRVNCISAGPLKSRAASAIGKAGDKTFID---LAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL 305 (319)
T ss_dssp CEEEEEEECCCC----------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred eeEEEEeeCCccChhhhhcccccchhhHH---HHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 99999999999999864321100000000 00000 11234556667777788888999887655555555555554
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=267.54 Aligned_cols=176 Identities=21% Similarity=0.271 Sum_probs=153.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|++|+++|++|++++|+++.++ + . ..+.++ +|+
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~-----------------~-~~~~~~-~D~-- 68 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK-------R-----------------S-GHRYVV-CDL-- 68 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------H-----------------T-CSEEEE-CCT--
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-------h-----------------h-CCeEEE-eeH--
Confidence 45799999999999999999999999999999999973321 1 1 145666 999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++ .++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus 69 ~~~~~~~~~~~----~~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~- 141 (249)
T 1o5i_A 69 RKDLDLLFEKV----KEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSF- 141 (249)
T ss_dssp TTCHHHHHHHS----CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred HHHHHHHHHHh----cCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcch-
Confidence 55677776654 38999999999876 4778899999999999999999999999999999876 47899999997
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++..+.++...|++||++++.|+++|+.|+++.||+||+|+||++.|++..
T Consensus 142 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 192 (249)
T 1o5i_A 142 SVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK 192 (249)
T ss_dssp GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH
T ss_pred HhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc
Confidence 677788889999999999999999999999999999999999999999854
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=267.58 Aligned_cols=188 Identities=25% Similarity=0.391 Sum_probs=170.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|++|||||++|||++++++|+++|++|++++| +++++++..+++++ .+.++.++.+|++|
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~ 82 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-----------------LGAQGVAIQADISK 82 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-----------------cCCcEEEEEecCCC
Confidence 4699999999999999999999999999999999 77777777777765 34578899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|+ + +++||++||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~--~~~iv~~sS~- 157 (274)
T 1ja9_A 83 PSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R--GGRIILTSSI- 157 (274)
T ss_dssp HHHHHHHHHHHHHHHSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E--EEEEEEECCG-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--CCEEEEEcCh-
Confidence 99999999999999999999999999876 46788899999999999999999999999999997 3 3899999987
Q ss_pred CCC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++. .+.++...|++||++++.|+++++.|+++.||++++|+||++.|++..
T Consensus 158 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~ 209 (274)
T 1ja9_A 158 AAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD 209 (274)
T ss_dssp GGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred HhccCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence 455 667888999999999999999999999999999999999999999864
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=268.77 Aligned_cols=166 Identities=21% Similarity=0.271 Sum_probs=150.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||+++|++|+++|++|++++|+.+ +|++|+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------------------~D~~~~ 47 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------------------LDISDE 47 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------------------CCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------------------cCCCCH
Confidence 3699999999999999999999999999999998531 799999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++ +++|+||||||+..+..++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++||. +
T Consensus 48 ~~v~~~~~~~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~-~ 119 (223)
T 3uce_A 48 KSVYHYFETI----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGM-L 119 (223)
T ss_dssp HHHHHHHHHH----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCG-G
T ss_pred HHHHHHHHHh----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecch-h
Confidence 9999988754 899999999998744678899999999999999999999999999999974 5899999988 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS 223 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~ 223 (347)
+..+.++...|++||+|+++|+++|+.|+++ |+||+|+||+++|++.....
T Consensus 120 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~ 170 (223)
T 3uce_A 120 SRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMN 170 (223)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSC
T ss_pred hccCCCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcc
Confidence 7888899999999999999999999999987 99999999999999875543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=263.12 Aligned_cols=213 Identities=19% Similarity=0.205 Sum_probs=180.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSG---DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G---~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
..+|++|||||++|||+++|++|+++| ++|++++|+.++++.+ +++.+ .+.++.++.+|
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~-----------------~~~~~~~~~~D 80 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAK-----------------NHSNIHILEID 80 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHH-----------------HCTTEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhc-----------------cCCceEEEEec
Confidence 456999999999999999999999999 9999999998876533 44433 23468899999
Q ss_pred CCCHHHHHHHHHHHHhhcC--CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC------CC
Q 019009 87 VCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ------PK 158 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g--~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~------~~ 158 (347)
++|.++++++++++.++++ ++|+||||||+..+..++.+.+.+++++++++|+.+++.++++++|.|+++ +.
T Consensus 81 l~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~ 160 (267)
T 1sny_A 81 LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQP 160 (267)
T ss_dssp TTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred CCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhccccccccc
Confidence 9999999999999999998 899999999987534678889999999999999999999999999999864 11
Q ss_pred ----CcEEEEEcCCCCCCCCC---CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhh
Q 019009 159 ----GGHIFNMDGAGSGGSST---PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231 (347)
Q Consensus 159 ----~g~Iv~vsS~~~~~~~~---~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~ 231 (347)
.++||++||. .+..+. +....|++||++++.|+++++.|+++.||+|++|+||+|+|++....
T Consensus 161 ~~~~~~~iv~isS~-~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------- 230 (267)
T 1sny_A 161 MGVGRAAIINMSSI-LGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS--------- 230 (267)
T ss_dssp SSTTTCEEEEECCG-GGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT---------
T ss_pred ccCCCceEEEEecc-cccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC---------
Confidence 5899999987 444443 36678999999999999999999999999999999999999986321
Q ss_pred hhccCCHHHHHHHHhhhhhhc
Q 019009 232 NIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 232 ~~~~~~pe~~a~~~~~~~~~~ 252 (347)
...+|+++|+.++..+...
T Consensus 231 --~~~~~~~~a~~~~~~~~~~ 249 (267)
T 1sny_A 231 --APLDVPTSTGQIVQTISKL 249 (267)
T ss_dssp --CSBCHHHHHHHHHHHHHHC
T ss_pred --CCCCHHHHHHHHHHHHHhc
Confidence 1247999999998777643
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-35 Score=260.97 Aligned_cols=209 Identities=15% Similarity=0.212 Sum_probs=170.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|++|||||++|||++++++|+++| ++|++++|+.++++++. ++ .+.++.++.+|++|
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~-------------------~~~~~~~~~~D~~~ 62 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SI-------------------KDSRVHVLPLTVTC 62 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TC-------------------CCTTEEEEECCTTC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hc-------------------cCCceEEEEeecCC
Confidence 5899999999999999999999999 99999999988764331 11 13468899999999
Q ss_pred HHHHHHHHHHHHhhcC--CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC------CC---
Q 019009 90 PADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ------PK--- 158 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g--~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~------~~--- 158 (347)
.++++++++++.+++| ++|+||||||+..+..++.+.+.+++++++++|+.+++.++++++|.|+++ +.
T Consensus 63 ~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 142 (250)
T 1yo6_A 63 DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSV 142 (250)
T ss_dssp HHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCT
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccC
Confidence 9999999999999998 999999999987534677889999999999999999999999999999764 21
Q ss_pred -CcEEEEEcCCCCCCCCC-------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh
Q 019009 159 -GGHIFNMDGAGSGGSST-------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 230 (347)
Q Consensus 159 -~g~Iv~vsS~~~~~~~~-------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~ 230 (347)
.++||++||. .+..+. +....|++||++++.|+++++.|+++.||+|++|+||+|+|++....
T Consensus 143 ~~~~iv~isS~-~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------- 213 (250)
T 1yo6_A 143 SRAAVITISSG-LGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------- 213 (250)
T ss_dssp TTCEEEEECCG-GGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------
T ss_pred CCcEEEEeccC-ccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCC--------
Confidence 6899999987 444443 56789999999999999999999999999999999999999986321
Q ss_pred hhhccCCHHHHHHHHhhhhhhc
Q 019009 231 FNIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 231 ~~~~~~~pe~~a~~~~~~~~~~ 252 (347)
...+|+++|+.++..+...
T Consensus 214 ---~~~~~~~~a~~~~~~~~~~ 232 (250)
T 1yo6_A 214 ---AALTVEQSTAELISSFNKL 232 (250)
T ss_dssp --------HHHHHHHHHHHTTC
T ss_pred ---CCCCHHHHHHHHHHHHhcc
Confidence 1237899999998777543
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=283.72 Aligned_cols=253 Identities=16% Similarity=0.133 Sum_probs=182.0
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChhHH------H-HHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 11 CTCRWFSVVS--TRGLGKALAREFLLSGDRVVVASRSSESV------R-MTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 11 ~~k~vlITGa--s~GIG~aiA~~la~~G~~Vil~~R~~~~l------~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
.||++||||| ++|||+++|++|+++|++|++++|++... + ...+++++ .. .+. ....+.
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~-----~~~------~~~~~~ 75 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRK-LP-----DGS------LIEFAG 75 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHB-CT-----TSC------BCCCSC
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhh-hh-----ccc------cccccc
Confidence 4699999999 89999999999999999999999875210 0 00111110 00 000 000012
Q ss_pred EEe------------cCCCC--------HHHHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCCCCHHHHHHHHHhhhh
Q 019009 82 GIA------------CDVCE--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLV 140 (347)
Q Consensus 82 ~~~------------~Dls~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~e~~~~~~~vN~~ 140 (347)
.+. +|++| .++++++++++.+++|+||+||||||+.. ...++.+.+.++|++++++|+.
T Consensus 76 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~ 155 (315)
T 2o2s_A 76 VYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAY 155 (315)
T ss_dssp EEECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhH
Confidence 333 33443 66899999999999999999999999753 2467889999999999999999
Q ss_pred HHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCCCc-chhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcc
Q 019009 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDL 218 (347)
Q Consensus 141 g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~-~~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~ 218 (347)
|++.++++++|+|++ +|+||++||. ++..+.++. ..|++||+|+++|+++|+.|+++ +||+||+|+||+|+|++
T Consensus 156 g~~~l~~~~~~~m~~---~g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~ 231 (315)
T 2o2s_A 156 SFVSLLQHFGPIMNE---GGSAVTLSYL-AAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA 231 (315)
T ss_dssp HHHHHHHHHSTTEEE---EEEEEEEEEG-GGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHH
T ss_pred HHHHHHHHHHHHHhc---CCEEEEEecc-cccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchh
Confidence 999999999999974 4899999997 567777777 58999999999999999999985 89999999999999998
Q ss_pred cccCcccchhhhhhhccCCHHH-HHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 219 LLSGSTIQNKQMFNIICELPET-VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~pe~-~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
............... ..+. ....+++++..|++++..+.||+++...++++..+..+|++.
T Consensus 232 ~~~~~~~~~~~~~~~---~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 293 (315)
T 2o2s_A 232 ASAIGKSGEKSFIDY---AIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH 293 (315)
T ss_dssp HHHTTCSSSSCHHHH---HHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred hhhccccccchhHHH---HHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence 543211000000000 0000 112234555667777777788988877666666666666653
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=303.64 Aligned_cols=227 Identities=22% Similarity=0.234 Sum_probs=169.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC---------ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASR---------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R---------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
.||++|||||++|||+++|++|+++|++|++++| +.+++++..+++++ .+..
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~-----------------~~~~-- 78 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK-----------------AGGE-- 78 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH-----------------TTCC--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH-----------------hCCe--
Confidence 4699999999999999999999999999999988 77778888888766 2223
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
+.+|++|.++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+
T Consensus 79 -~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~ 155 (613)
T 3oml_A 79 -AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGR 155 (613)
T ss_dssp -EEECCCCGGGHHHHHC----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEE
T ss_pred -EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCE
Confidence 247999999999999999999999999999999987 5788999999999999999999999999999999987 5799
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
||++||. ++..+.++...|++||+|+++|+++|+.|+++.||+||+|+||++ |+|....... ..
T Consensus 156 IV~isS~-a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~---~~----------- 219 (613)
T 3oml_A 156 IIMTSSN-SGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD---IL----------- 219 (613)
T ss_dssp EEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH---HH-----------
T ss_pred EEEECCH-HHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch---hh-----------
Confidence 9999997 677788899999999999999999999999999999999999975 6665332211 00
Q ss_pred HHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 242 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 242 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.....|++++..+.||+++. .++++..+..+|++
T Consensus 220 -----~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vdGG~ 253 (613)
T 3oml_A 220 -----FNELKPKLIAPVVAYLCHES-CEDNGSYIESAAGW 253 (613)
T ss_dssp -----HTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEETTE
T ss_pred -----hhcCCHHHHHHHHHHhcCCC-cCCCceEEEECCCe
Confidence 11124455555556666665 44455555555544
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=264.75 Aligned_cols=183 Identities=23% Similarity=0.333 Sum_probs=161.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|++|||||++|||++++++|+++|++|++++|+++++++..+++ ..+.++.+|++|.
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~~~~ 64 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---------------------PGIEPVCVDLGDW 64 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCTTCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---------------------cCCCcEEecCCCH
Confidence 3689999999999999999999999999999999988766544321 1245669999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++ +++++|+||||||+.. ..++.+.+.+++++.+++|+.+++.++++++|.|++++..++||++||. .
T Consensus 65 ~~~~~~~~----~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~-~ 138 (244)
T 1cyd_A 65 DATEKALG----GIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM-V 138 (244)
T ss_dssp HHHHHHHT----TCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-G
T ss_pred HHHHHHHH----HcCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcch-h
Confidence 99988876 5689999999999876 4778889999999999999999999999999999876326899999997 5
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+..+.++...|++||++++.|+++++.|+++.||+|++|+||++.|++..
T Consensus 139 ~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~ 188 (244)
T 1cyd_A 139 AHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK 188 (244)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred hcCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence 77777888999999999999999999999989999999999999999754
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=278.21 Aligned_cols=254 Identities=17% Similarity=0.132 Sum_probs=175.1
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec---
Q 019009 11 CTCRWFSVVST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC--- 85 (347)
Q Consensus 11 ~~k~vlITGas--~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 85 (347)
.+|++|||||+ +|||+++|++|+++|++|++++|++..-. ..+.......... . .... .........+.+
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~-~-~~~~--~~~~~~~~~~~~~~~ 81 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNI-FETSLRRGKFDQS-R-VLPD--GSLMEIKKVYPLDAV 81 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHH-HHHHHHTTTTTGG-G-BCTT--SSBCCEEEEEEECTT
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchh-hhhhhhhhHhhhh-h-hhcc--cccccccccccccee
Confidence 46999999999 99999999999999999999998743210 0000000000000 0 0000 000001122233
Q ss_pred -----CCC----C--------HHHHHHHHHHHHhhcCCccEEEEcCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 019009 86 -----DVC----E--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTR 147 (347)
Q Consensus 86 -----Dls----~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~ 147 (347)
|++ | .++++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.|++.+++
T Consensus 82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 161 (297)
T 1d7o_A 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence 232 2 67899999999999999999999999753 23677889999999999999999999999
Q ss_pred HHHHHhHcCCCCcEEEEEcCCCCCCCCCCCc-chhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcccccCccc
Q 019009 148 EAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTI 225 (347)
Q Consensus 148 ~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~-~~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~~~~~~~~ 225 (347)
+++|+|++ +|+||++||. ++..+.++. ..|++||+|+++|+++|+.|+++ +||+||+|+||+|+|++......
T Consensus 162 ~~~~~m~~---~g~iv~isS~-~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~- 236 (297)
T 1d7o_A 162 HFLPIMNP---GGASISLTYI-ASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF- 236 (297)
T ss_dssp HHGGGEEE---EEEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH-
T ss_pred HHHHHhcc---CceEEEEecc-ccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc-
Confidence 99999964 4899999997 567777777 69999999999999999999985 89999999999999998643210
Q ss_pred chhhhhhhccCCHHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 226 QNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 226 ~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
...... ......+++++..|++++..+.||+++...++++..+..+|++
T Consensus 237 -~~~~~~------~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 237 -IDTMIE------YSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp -HHHHHH------HHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred -cHHHHH------HhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 000000 0001122334455566666666777776544444444444443
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=261.43 Aligned_cols=208 Identities=22% Similarity=0.267 Sum_probs=175.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLL-SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~-~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+|++|||||++|||+++|++|++ +|++|++++|+.+++++..+++.. .+.++.++.+|++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~ 64 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-----------------EGLSPRFHQLDID 64 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-----------------TTCCCEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh-----------------cCCeeEEEECCCC
Confidence 3579999999999999999999999 999999999999988888887765 3456889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCC-HHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT-NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~-~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
|.++++++++++.++++++|+||||||+... .. .+.+ .+++++++++|+.+++.++++++|.|++ .++||++||
T Consensus 65 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~-~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS 139 (276)
T 1wma_A 65 DLQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSS 139 (276)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCCCCCC-TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccccc-CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECC
Confidence 9999999999999999999999999998652 32 3344 5899999999999999999999999864 479999998
Q ss_pred CCCCCC------------------------------------------CCCCcchhhhHHHHHHHHHHHHHhHhcC----
Q 019009 168 AGSGGS------------------------------------------STPLTAVYGSTKCGLRQLQASLFKESKR---- 201 (347)
Q Consensus 168 ~~~~~~------------------------------------------~~~~~~~Y~asKaal~~~~~~La~el~~---- 201 (347)
. .+.. +.|. ..|++||++++.|++.++.|+++
T Consensus 140 ~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~ 217 (276)
T 1wma_A 140 I-MSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKG 217 (276)
T ss_dssp H-HHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred h-hhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCC
Confidence 6 2221 1233 78999999999999999999987
Q ss_pred CCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhc
Q 019009 202 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 202 ~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~ 252 (347)
.||+|++|+||+|.|++.... ...+|+++|+.++..+..+
T Consensus 218 ~~i~v~~v~PG~v~t~~~~~~-----------~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 218 DKILLNACCPGWVRTDMAGPK-----------ATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp SCCEEEEEECCSBCSTTTCTT-----------CSBCHHHHTHHHHHHHSCC
T ss_pred CceEEEEecCCccccCcCCcc-----------ccCChhHhhhhHhhhhcCc
Confidence 799999999999999986421 1247899998887666533
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-34 Score=253.99 Aligned_cols=207 Identities=23% Similarity=0.234 Sum_probs=168.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||++++++|+++|++|++++|+++ . .++.++.+|++|.+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------------------------~~~~~~~~D~~~~~ 52 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------------------------EDLIYVEGDVTREE 52 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------------------------SSSEEEECCTTCHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------------------------cceEEEeCCCCCHH
Confidence 689999999999999999999999999999999864 1 23578899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCC----CHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-----CCcEE
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF----TNEEIEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHI 162 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~----~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-----~~g~I 162 (347)
+++++++++ ++++++|+||||||... ..++.+. +.+++++++++|+.+++.++++++|.|++++ ..++|
T Consensus 53 ~~~~~~~~~-~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~i 130 (242)
T 1uay_A 53 DVRRAVARA-QEEAPLFAVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVI 130 (242)
T ss_dssp HHHHHHHHH-HHHSCEEEEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEE
T ss_pred HHHHHHHHH-HhhCCceEEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEE
Confidence 999999999 88899999999999876 3445444 4559999999999999999999999998753 13599
Q ss_pred EEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhh-----hccCC
Q 019009 163 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN-----IICEL 237 (347)
Q Consensus 163 v~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~-----~~~~~ 237 (347)
|++||. .+..+.++...|++||++++.++++++.|+++.||+|++|+||++.|++.............. .....
T Consensus 131 v~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (242)
T 1uay_A 131 VNTASV-AAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGR 209 (242)
T ss_dssp EEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCC
T ss_pred EEeCCh-hhccCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCC
Confidence 999987 566677788999999999999999999999999999999999999999865432211111111 11236
Q ss_pred HHHHHHHHhhhhh
Q 019009 238 PETVARTLVPRIR 250 (347)
Q Consensus 238 pe~~a~~~~~~~~ 250 (347)
|+++|+.++..+.
T Consensus 210 ~~dva~~~~~l~~ 222 (242)
T 1uay_A 210 PEEYAALVLHILE 222 (242)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 7777777665443
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=263.33 Aligned_cols=167 Identities=14% Similarity=0.131 Sum_probs=136.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||+++|++|+++|++|++++|++++++ . . +.+|++|.+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~--~-~~~Dl~~~~ 50 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------------------A--D-LSTAEGRKQ 50 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------------------C--C-TTSHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------------------c--c-cccCCCCHH
Confidence 479999999999999999999999999999999875421 0 1 578999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++ ++++|+||||||+... . +.+++++++|+.+++.++++++|+|+++ +.++||++||. ++
T Consensus 51 ~v~~~~~~~---~~~id~lv~~Ag~~~~---~-----~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~~ 117 (257)
T 1fjh_A 51 AIADVLAKC---SKGMDGLVLCAGLGPQ---T-----KVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSV-AS 117 (257)
T ss_dssp HHHHHHTTC---TTCCSEEEECCCCCTT---C-----SSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCG-GG
T ss_pred HHHHHHHHh---CCCCCEEEECCCCCCC---c-----ccHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEECCh-hh
Confidence 998887633 3899999999997541 1 1289999999999999999999999876 47899999997 44
Q ss_pred C----------------------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 172 G----------------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 172 ~----------------------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
. .+.++...|++||++++.|+++|+.|++++||+||+|+||+|.|++...
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 195 (257)
T 1fjh_A 118 AHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQA 195 (257)
T ss_dssp GSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------
T ss_pred hccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchh
Confidence 4 3444678999999999999999999999999999999999999998654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-33 Score=274.16 Aligned_cols=223 Identities=12% Similarity=0.109 Sum_probs=184.2
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEE-eCCh-------------hHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVA-SRSS-------------ESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~-~R~~-------------~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
..|..+|++|||||++|||+++|++|+++|++ |+++ +|+. +.+++..+++++
T Consensus 246 ~~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~------------- 312 (525)
T 3qp9_A 246 PWWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD------------- 312 (525)
T ss_dssp CSSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH-------------
T ss_pred ceecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-------------
Confidence 46888999999999999999999999999986 7888 9984 455666677765
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMR 151 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp 151 (347)
.+.++.++.||++|.++++++++++. ++++||+||||||+.. ..++.+.+.+++++++++|+.|++++.+++.|
T Consensus 313 ----~g~~v~~~~~Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~ 386 (525)
T 3qp9_A 313 ----LGATATVVTCDLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLRE 386 (525)
T ss_dssp ----HTCEEEEEECCTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cCCEEEEEECCCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45689999999999999999999988 7899999999999987 58899999999999999999999999999999
Q ss_pred HhHcCCCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhh
Q 019009 152 VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231 (347)
Q Consensus 152 ~l~~~~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~ 231 (347)
.|++++..++||++||. ++..+.+++..|+++|+++++| +.+++..||++++|+||+++|+|.............
T Consensus 387 ~~~~~~~~~~iV~~SS~-a~~~g~~g~~~YaaaKa~l~~l----A~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~ 461 (525)
T 3qp9_A 387 AAAAGGRPPVLVLFSSV-AAIWGGAGQGAYAAGTAFLDAL----AGQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRL 461 (525)
T ss_dssp TC----CCCEEEEEEEG-GGTTCCTTCHHHHHHHHHHHHH----HTSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHT
T ss_pred ccccCCCCCEEEEECCH-HHcCCCCCCHHHHHHHHHHHHH----HHHHHhCCCCEEEEECCccccccccchhhHHHHHhc
Confidence 99876336899999998 7888899999999999999887 457777899999999999999997432211111112
Q ss_pred hhccCCHHHHHHHHhhhhhhcc
Q 019009 232 NIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 232 ~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
.....+|+++++.+...+....
T Consensus 462 g~~~l~pee~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 462 GLRPLAPATALTALDTALGHGD 483 (525)
T ss_dssp TBCCBCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHhCCC
Confidence 2334689999999988776543
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-31 Score=290.27 Aligned_cols=235 Identities=19% Similarity=0.196 Sum_probs=183.6
Q ss_pred CCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRG-LGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~G-IG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||++| ||+++|+.|+++|++|+++ +|+.+++++..+++.+.... .+.++.++.||++
T Consensus 674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~-------------~g~~v~~v~~DVs 740 (1887)
T 2uv8_A 674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA-------------KGSTLIVVPFNQG 740 (1887)
T ss_dssp TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC-------------TTCEEEEEECCTT
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhc-------------CCCeEEEEEecCC
Confidence 4699999999998 9999999999999999998 68888888887777554321 2467899999999
Q ss_pred CHHHHHHHHHHHHhh-----cC-CccEEEEcCCCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--HHHhHcCC
Q 019009 89 EPADVQKLSNFAVNE-----FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTREA--MRVMRDQP 157 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~-----~g-~iD~li~nAG~~~~~~-~~~~~~--~e~~~~~~~vN~~g~~~l~~~~--lp~l~~~~ 157 (347)
|.++++++++.+.++ +| +||+||||||+.. .. ++.+.+ .++|+++|++|+.+++.+++++ +|.|+++
T Consensus 741 d~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~- 818 (1887)
T 2uv8_A 741 SKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR- 818 (1887)
T ss_dssp CHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-
T ss_pred CHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-
Confidence 999999999999988 66 9999999999976 45 788888 8999999999999999999998 7888776
Q ss_pred CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHH-HHHHHhHhcCCCeEEEEeeCCccc-CcccccCcccchhhhhhhcc
Q 019009 158 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL-QASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFNIIC 235 (347)
Q Consensus 158 ~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~-~~~La~el~~~gI~v~~i~PG~v~-T~~~~~~~~~~~~~~~~~~~ 235 (347)
++|+||++||. ++..+ +...|++||+|+++| ++.++.|+++. |+||+|+||+|+ |+|...... ....
T Consensus 819 ~~G~IVnISS~-ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~-~~~~------ 887 (1887)
T 2uv8_A 819 PAQVILPMSPN-HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI-IAEG------ 887 (1887)
T ss_dssp CEEEEEEECSC-TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCT-THHH------
T ss_pred CCCEEEEEcCh-HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchh-HHHH------
Confidence 46899999997 45544 678999999999999 89999999887 999999999999 787643110 0000
Q ss_pred CCHHHHHHHHhhhhhhccccccceeeccchH-HHHHHhhhhhc
Q 019009 236 ELPETVARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLR 277 (347)
Q Consensus 236 ~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 277 (347)
..+..+ +...|++++..+.||+++. ..++++..+..
T Consensus 888 -----~~~~pl-r~~sPEEVA~avlfLaSd~~as~iTGq~I~V 924 (1887)
T 2uv8_A 888 -----IEKMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA 924 (1887)
T ss_dssp -----HHTTSC-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred -----HHhcCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence 001011 2223445555556788776 55666666654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-31 Score=233.82 Aligned_cols=200 Identities=20% Similarity=0.210 Sum_probs=164.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|++|||||++|||++++++|+++ +|++++|+++++++..+++ . . .++.+|++|+++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-------------------~-~--~~~~~D~~~~~~ 56 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-------------------G-A--RALPADLADELE 56 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-------------------T-C--EECCCCTTSHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-------------------c-C--cEEEeeCCCHHH
Confidence 68999999999999999999999 9999999988776655443 1 1 678999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+++++++ ++++|+||||||... ..++.+.+.+++++++++|+.+++.+++++ +++ +.++||++||. .+.
T Consensus 57 ~~~~~~~----~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~sS~-~~~ 125 (207)
T 2yut_A 57 AKALLEE----AGPLDLLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-KGARAVFFGAY-PRY 125 (207)
T ss_dssp HHHHHHH----HCSEEEEEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-EEEEEEEECCC-HHH
T ss_pred HHHHHHh----cCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-CCcEEEEEcCh-hhc
Confidence 9998876 689999999999876 477888899999999999999999999988 233 46899999987 566
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhc
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~ 252 (347)
.+.++...|++||++++.+++.++.|+++.||++++|+||++.|++...... . ......|+++|+.++..+..+
T Consensus 126 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~----~--~~~~~~~~dva~~~~~~~~~~ 199 (207)
T 2yut_A 126 VQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGG----P--PKGALSPEEAARKVLEGLFRE 199 (207)
T ss_dssp HSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTS----C--CTTCBCHHHHHHHHHHHHC--
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCC----C--CCCCCCHHHHHHHHHHHHhCC
Confidence 6778889999999999999999999999999999999999999998432111 0 122347999999998777654
Q ss_pred c
Q 019009 253 K 253 (347)
Q Consensus 253 ~ 253 (347)
.
T Consensus 200 ~ 200 (207)
T 2yut_A 200 P 200 (207)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-32 Score=286.17 Aligned_cols=235 Identities=19% Similarity=0.190 Sum_probs=184.4
Q ss_pred CCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRG-LGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~G-IG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||++| ||+++|+.|+++|++|+++ +|+.+++++..+++.+.... .+.++.++.+|++
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a-------------~Ga~V~vV~~DVT 541 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA-------------KGSTLIVVPFNQG 541 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCC-------------TTCEEEEEECCSS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhc-------------CCCeEEEEEeCCC
Confidence 4699999999998 9999999999999999998 68777776666665332110 2457899999999
Q ss_pred CHHHHHHHHHHHHhh-----cC-CccEEEEcCCCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--HHHhHcCC
Q 019009 89 EPADVQKLSNFAVNE-----FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTREA--MRVMRDQP 157 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~-----~g-~iD~li~nAG~~~~~~-~~~~~~--~e~~~~~~~vN~~g~~~l~~~~--lp~l~~~~ 157 (347)
|.++++++++++.++ +| +||+||||||+.. .. ++.+.+ .++|++++++|+.+++.+++++ +|.|+++
T Consensus 542 D~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr- 619 (1688)
T 2pff_A 542 SKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR- 619 (1688)
T ss_dssp STTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-
T ss_pred CHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-
Confidence 999999999999988 77 9999999999876 45 788888 9999999999999999999999 8889876
Q ss_pred CCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHH-HHHHHhHhcCCCeEEEEeeCCccc-CcccccCcccchhhhhhhcc
Q 019009 158 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL-QASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFNIIC 235 (347)
Q Consensus 158 ~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~-~~~La~el~~~gI~v~~i~PG~v~-T~~~~~~~~~~~~~~~~~~~ 235 (347)
++|+||++||. ++..+ +...|++||+|+++| ++.++.|+++. |+||+|+||+|+ |+|...... ... ...
T Consensus 620 ggGrIVnISSi-AG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~-~~~-~l~--- 690 (1688)
T 2pff_A 620 PAQVILPMSPN-HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI-IAE-GIE--- 690 (1688)
T ss_dssp CEEECCCCCSC-TTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTT-CST-TTS---
T ss_pred CCCEEEEEECh-HhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchH-HHH-HHH---
Confidence 46899999997 45544 678999999999999 78899999877 999999999999 787543110 000 000
Q ss_pred CCHHHHHHHHhhhhhhccccccceeeccchH-HHHHHhhhhhc
Q 019009 236 ELPETVARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLR 277 (347)
Q Consensus 236 ~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 277 (347)
+..+ +...|++++..+.||+++. ..++++..+..
T Consensus 691 -------~ipl-R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V 725 (1688)
T 2pff_A 691 -------KMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA 725 (1688)
T ss_dssp -------SSSC-CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred -------hCCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence 0011 2235667777777888776 55555555543
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=281.90 Aligned_cols=191 Identities=17% Similarity=0.195 Sum_probs=163.9
Q ss_pred CCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRG-LGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~G-IG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++|||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+.... .+.++.++.||++
T Consensus 651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~-------------~G~~v~~v~~DVs 717 (1878)
T 2uv9_A 651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGA-------------RGSQLVVVPFNQG 717 (1878)
T ss_dssp TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC-------------TTCEEEEEECCTT
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhc-------------cCCeEEEEEcCCC
Confidence 4699999999999 99999999999999999994 7777777777777543211 2467899999999
Q ss_pred CHHHHHHHHHHHHhh---cC-CccEEEEcCCCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHH--HHHHhHcCCCC
Q 019009 89 EPADVQKLSNFAVNE---FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTRE--AMRVMRDQPKG 159 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~---~g-~iD~li~nAG~~~~~~-~~~~~~--~e~~~~~~~vN~~g~~~l~~~--~lp~l~~~~~~ 159 (347)
|.++++++++.+.++ +| +||+||||||+.. .. ++.+.+ .++|++++++|+.+++.+++. ++|.|.++ +.
T Consensus 718 d~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-~~ 795 (1878)
T 2uv9_A 718 SKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-PA 795 (1878)
T ss_dssp CHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-CE
T ss_pred CHHHHHHHHHHHHHhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-CC
Confidence 999999999999998 99 9999999999876 35 788898 899999999999999999987 78888766 46
Q ss_pred cEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHH-hHhcCCCeEEEEeeCCccc-Ccccc
Q 019009 160 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF-KESKRSKVGVHTASPGMVL-TDLLL 220 (347)
Q Consensus 160 g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La-~el~~~gI~v~~i~PG~v~-T~~~~ 220 (347)
|+||++||. ++..+ +...|++||+|+++|++.++ .|+++. |+||+|+||+++ |+|..
T Consensus 796 G~IVnISS~-ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~ 854 (1878)
T 2uv9_A 796 QVILPLSPN-HGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMS 854 (1878)
T ss_dssp EECCEECSC-SSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCS
T ss_pred CEEEEEcch-hhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccc
Confidence 899999997 55544 46789999999999988765 457776 999999999999 99864
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=226.21 Aligned_cols=186 Identities=18% Similarity=0.223 Sum_probs=159.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++||||++|||++++++|+ +|++|++++|+++ .+.+|++|++++
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------------------~~~~D~~~~~~~ 49 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------------------DVTVDITNIDSI 49 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------------------SEECCTTCHHHH
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------------------ceeeecCCHHHH
Confidence 79999999999999999999 9999999999742 368999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
+++++.+ +++|+||||||... ..++.+.+.+++++.+++|+.+++.+++++.|.|++ +++||++||. .+..
T Consensus 50 ~~~~~~~----~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~-~~~~ 120 (202)
T 3d7l_A 50 KKMYEQV----GKVDAIVSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGI-MMED 120 (202)
T ss_dssp HHHHHHH----CCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCG-GGTS
T ss_pred HHHHHHh----CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcch-hhcC
Confidence 9988765 78999999999876 477888999999999999999999999999999864 4899999987 5677
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
+.+....|+++|++++.+++.++.|+ +.||++++|+||++.|++..... .........|+++|+.++..+
T Consensus 121 ~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~-----~~~~~~~~~~~dva~~~~~~~ 190 (202)
T 3d7l_A 121 PIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEP-----FFEGFLPVPAAKVARAFEKSV 190 (202)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGG-----GSTTCCCBCHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhh-----hccccCCCCHHHHHHHHHHhh
Confidence 78888999999999999999999999 78999999999999999743111 111122347999999887655
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=246.54 Aligned_cols=226 Identities=14% Similarity=0.136 Sum_probs=176.8
Q ss_pred cccCC--CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 8 HWSCT--CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 8 ~~~~~--k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
.|..+ |++|||||++|||+++|++|+++|+ +|++++|+. +..++..+++++ .+.++.
T Consensus 233 ~~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~ 295 (496)
T 3mje_A 233 GKRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ-----------------LGVRVT 295 (496)
T ss_dssp TCCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEE
T ss_pred CCCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh-----------------cCCeEE
Confidence 45544 9999999999999999999999998 899999974 345666667765 567899
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
++.||++|.++++++++++.++ ++||+||||||+.....++.+.+.+++++++++|+.|++++.+++.+. ..++
T Consensus 296 ~~~~Dvtd~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-----~~~~ 369 (496)
T 3mje_A 296 IAACDAADREALAALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-----DLDA 369 (496)
T ss_dssp EEECCTTCHHHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-----CCSE
T ss_pred EEEccCCCHHHHHHHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCE
Confidence 9999999999999999998777 799999999999732578999999999999999999999999887654 3578
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch-hhhhhhccCCHHH
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQMFNIICELPET 240 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~-~~~~~~~~~~pe~ 240 (347)
||++||. ++..+.+++..|+++|++++.|++.++ ..||++++|+||++.|+.+........ .........+|++
T Consensus 370 iV~~SS~-a~~~g~~g~~~YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~ 444 (496)
T 3mje_A 370 FVLFSSG-AAVWGSGGQPGYAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEH 444 (496)
T ss_dssp EEEEEEH-HHHTTCTTCHHHHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHH
T ss_pred EEEEeCh-HhcCCCCCcHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHH
Confidence 9999998 677888999999999999998887554 469999999999997765543221111 1112233458999
Q ss_pred HHHHHhhhhhhccccccceeec
Q 019009 241 VARTLVPRIRVVKGSGKAINYL 262 (347)
Q Consensus 241 ~a~~~~~~~~~~~~~~~~~~~l 262 (347)
+++.+...+...+ ....+.++
T Consensus 445 ~~~~l~~~l~~~~-~~~~v~~l 465 (496)
T 3mje_A 445 ALGALDQMLENDD-TAAAITLM 465 (496)
T ss_dssp HHHHHHHHHHHTC-SEEEECEE
T ss_pred HHHHHHHHHcCCC-ceEEEEEc
Confidence 9888776665443 23333444
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=262.21 Aligned_cols=213 Identities=15% Similarity=0.138 Sum_probs=174.8
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHH-HCCC-eEEEEeCC---hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeE
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFL-LSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la-~~G~-~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (347)
.+..+|++|||||++|||+++|+.|+ ++|+ +|++++|+ .+++++..+++++ .+.++.+
T Consensus 526 ~~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~G~~v~~ 588 (795)
T 3slk_A 526 VWDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA-----------------YGAEVSL 588 (795)
T ss_dssp CCCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEE
T ss_pred ccccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh-----------------cCCcEEE
Confidence 46778999999999999999999999 7999 59999999 4556777777766 5678999
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEE
Q 019009 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 162 (347)
Q Consensus 83 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~I 162 (347)
+.||++|.++++++++++.+++ +||+||||||+.. ..++.+.+.|+|++++++|+.|++++++++.|.| +|
T Consensus 589 ~~~Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~i 659 (795)
T 3slk_A 589 QACDVADRETLAKVLASIPDEH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------AL 659 (795)
T ss_dssp EECCTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EE
T ss_pred EEeecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EE
Confidence 9999999999999999998776 9999999999987 5889999999999999999999999999997776 69
Q ss_pred EEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch-hh--hhhhccCCHH
Q 019009 163 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQ--MFNIICELPE 239 (347)
Q Consensus 163 v~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~-~~--~~~~~~~~pe 239 (347)
|++||. ++..+.+++..|++||+ |+++|++++++.||++|+|+||++.|+++........ .. ........++
T Consensus 660 V~~SS~-ag~~g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~ 734 (795)
T 3slk_A 660 VLFSSV-SGVLGSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTE 734 (795)
T ss_dssp EEEEET-HHHHTCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHH
T ss_pred EEEccH-HhcCCCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHH
Confidence 999998 78889999999999995 6677777888889999999999999886533211111 11 1122334666
Q ss_pred HHHHHHhhhhhh
Q 019009 240 TVARTLVPRIRV 251 (347)
Q Consensus 240 ~~a~~~~~~~~~ 251 (347)
+....+...+..
T Consensus 735 e~~~~~~~~l~~ 746 (795)
T 3slk_A 735 EGLSQFDAACGG 746 (795)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHHhC
Confidence 666666555443
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=221.09 Aligned_cols=197 Identities=15% Similarity=0.119 Sum_probs=153.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||++++++|+++|++|++++|++++++ . .+.+|++|.+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------------------~---~~~~D~~~~~ 50 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------------------A---DLSTPGGRET 50 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------------------C---CTTSHHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------------------c---cccCCcccHH
Confidence 378999999999999999999999999999999865321 0 1578999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++ .+++|+||||||.... .+.++..+++|+.+++.++++++|.|+++ +.++||++||. .+
T Consensus 51 ~~~~~~~~~---~~~~d~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~ 117 (255)
T 2dkn_A 51 AVAAVLDRC---GGVLDGLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRG-QQPAAVIVGSI-AA 117 (255)
T ss_dssp HHHHHHHHH---TTCCSEEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCG-GG
T ss_pred HHHHHHHHc---CCCccEEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhc-CCceEEEEecc-cc
Confidence 999888754 3789999999997531 12378999999999999999999999876 46899999987 34
Q ss_pred CCCC--------------------------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCc-c
Q 019009 172 GSST--------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS-T 224 (347)
Q Consensus 172 ~~~~--------------------------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~-~ 224 (347)
..+. +....|++||++++.+++.++.|+++.||++++|+||++.|++..... .
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~ 197 (255)
T 2dkn_A 118 TQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD 197 (255)
T ss_dssp GSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC
T ss_pred ccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc
Confidence 3332 456789999999999999999999888999999999999999754321 1
Q ss_pred cchhhhh------hhccCCHHHHHHHHhhhhhh
Q 019009 225 IQNKQMF------NIICELPETVARTLVPRIRV 251 (347)
Q Consensus 225 ~~~~~~~------~~~~~~pe~~a~~~~~~~~~ 251 (347)
....... ......++++|+.++..+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 230 (255)
T 2dkn_A 198 PRYGESTRRFVAPLGRGSEPREVAEAIAFLLGP 230 (255)
T ss_dssp TTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSG
T ss_pred hhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCC
Confidence 0001110 01124688888887766554
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-29 Score=279.42 Aligned_cols=228 Identities=14% Similarity=0.123 Sum_probs=165.6
Q ss_pred CCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEe
Q 019009 11 CTCRWFSVVSTRG-LGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA 84 (347)
Q Consensus 11 ~~k~vlITGas~G-IG~aiA~~la~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (347)
.||++|||||++| ||+++|+.|+++|++|++++|+.++ ++++.+++.. .+.++..+.
T Consensus 2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-----------------~G~~~~~v~ 2197 (3089)
T 3zen_D 2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR-----------------FDATLWVVP 2197 (3089)
T ss_dssp CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC-----------------TTCEEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh-----------------cCCeEEEEE
Confidence 5799999999999 9999999999999999999998776 3333333322 356788999
Q ss_pred cCCCCHHHHHHHHHHHHh----hcCCccEEEEcCCCC----CCCCCCCCCCHHHH----HHHHHhhhhHHHHHHHHHHHH
Q 019009 85 CDVCEPADVQKLSNFAVN----EFGSIDIWINNAGTN----KGFKPLLQFTNEEI----EQIVSTNLVGSILCTREAMRV 152 (347)
Q Consensus 85 ~Dls~~~~v~~~~~~i~~----~~g~iD~li~nAG~~----~~~~~~~~~~~e~~----~~~~~vN~~g~~~l~~~~lp~ 152 (347)
+|++|.++++++++++.+ +||+||+||||||+. ....+..+.+.++| +..+++|+.+++.+++.+.|.
T Consensus 2198 ~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~ 2277 (3089)
T 3zen_D 2198 ANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKI 2277 (3089)
T ss_dssp CCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 899999999999981 11122333344444 455999999999999999999
Q ss_pred hHcCCCC---cEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhH--hcCCCeEEEEeeCCccc-CcccccCcccc
Q 019009 153 MRDQPKG---GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVL-TDLLLSGSTIQ 226 (347)
Q Consensus 153 l~~~~~~---g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~e--l~~~gI~v~~i~PG~v~-T~~~~~~~~~~ 226 (347)
|.+++.+ +.|+++++. .+ ..++...|++||+|+++|+++|+.| +++ +|+||+|+||+|+ |++...... .
T Consensus 2278 m~~~~~g~~~~ii~~~ss~-~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~-~ 2352 (3089)
T 3zen_D 2278 GAERDIASRLHVVLPGSPN-RG--MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA-I 2352 (3089)
T ss_dssp HHHTTCCCCEEEEEEECSS-TT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT-T
T ss_pred HHHcCCCceeEEEEECCcc-cc--cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh-H
Confidence 9876322 233333332 22 2345568999999999999999999 665 6999999999999 666432110 0
Q ss_pred hhhhhhhccCCHHHHHHHHhhhhhhccccccceeeccchHHHHHHh
Q 019009 227 NKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALV 272 (347)
Q Consensus 227 ~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 272 (347)
.+....... +...|++++..+.||+++.....+.
T Consensus 2353 -----------~~~~~~~~~-r~~~PeEIA~avlfLaS~~a~~~~~ 2386 (3089)
T 3zen_D 2353 -----------VSAVEEAGV-TTYTTDEMAAMLLDLCTVETKVAAA 2386 (3089)
T ss_dssp -----------HHHHGGGSC-BCEEHHHHHHHHHHTTSHHHHHHHH
T ss_pred -----------HHHHHhcCC-CCCCHHHHHHHHHHHhChhhhhHhc
Confidence 111111111 2225566666777999988765443
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=237.30 Aligned_cols=216 Identities=19% Similarity=0.169 Sum_probs=171.9
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChh---HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.|..++++|||||++|||++++++|+++|+ +|++++|+.. .+++..+++++ .+.++.++
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~~~ 284 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-----------------LGARTTVA 284 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEE
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHh-----------------cCCEEEEE
Confidence 578889999999999999999999999999 5999999875 45566666655 45689999
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.||++|.++++++++.+ .++++||+||||||+.. ..++.+.+.+++++++++|+.|++++.+++.+ . +.++||
T Consensus 285 ~~Dv~d~~~v~~~~~~i-~~~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~-~~~~~V 357 (486)
T 2fr1_A 285 ACDVTDRESVRELLGGI-GDDVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTRE----L-DLTAFV 357 (486)
T ss_dssp ECCTTCHHHHHHHHHTS-CTTSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----S-CCSEEE
T ss_pred EeCCCCHHHHHHHHHHH-HhcCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----C-CCCEEE
Confidence 99999999999999998 66789999999999977 47888999999999999999999999987744 2 468999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc-ccccCcccchhhhhhhccCCHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD-LLLSGSTIQNKQMFNIICELPETVA 242 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~-~~~~~~~~~~~~~~~~~~~~pe~~a 242 (347)
++||. ++..+.++...|+++|++++.|++.++ ..||++++|+||++.++ |..... ............+|++++
T Consensus 358 ~~SS~-a~~~g~~g~~~Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~-~~~~~~~g~~~i~~e~~a 431 (486)
T 2fr1_A 358 LFSSF-ASAFGAPGLGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV-ADRFRRHGVIEMPPETAC 431 (486)
T ss_dssp EEEEH-HHHTCCTTCTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC-------------CTTTTEECBCHHHHH
T ss_pred EEcCh-HhcCCCCCCHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhH-HHHHHhcCCCCCCHHHHH
Confidence 99997 566778889999999999998876554 45899999999999886 432211 000011123346899999
Q ss_pred HHHhhhhhhcc
Q 019009 243 RTLVPRIRVVK 253 (347)
Q Consensus 243 ~~~~~~~~~~~ 253 (347)
+.+...+...+
T Consensus 432 ~~l~~~l~~~~ 442 (486)
T 2fr1_A 432 RALQNALDRAE 442 (486)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhCCC
Confidence 99988776543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-27 Score=232.29 Aligned_cols=214 Identities=15% Similarity=0.182 Sum_probs=173.5
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChh---HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeE
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (347)
..|..+|++|||||++|||++++++|+++|+ +|++++|+.. .+++..+++++ .+.++.+
T Consensus 254 ~~~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~~ 316 (511)
T 2z5l_A 254 ASWQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG-----------------HGCEVVH 316 (511)
T ss_dssp CCCCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT-----------------TTCEEEE
T ss_pred CCcCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh-----------------cCCEEEE
Confidence 3577889999999999999999999999999 6999999874 35555666654 4568999
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEE
Q 019009 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 162 (347)
Q Consensus 83 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~I 162 (347)
+.||++|.++++++++. +++|+||||||+.. ..++.+.+.+++++++++|+.|++++.+++.+. . +.++|
T Consensus 317 ~~~Dvtd~~~v~~~~~~-----~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~---~~~~~ 386 (511)
T 2z5l_A 317 AACDVAERDALAALVTA-----YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K---GLDAF 386 (511)
T ss_dssp EECCSSCHHHHHHHHHH-----SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T---TCCCE
T ss_pred EEeCCCCHHHHHHHHhc-----CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c---CCCEE
Confidence 99999999999998876 68999999999977 578889999999999999999999999876432 1 35789
Q ss_pred EEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc-cCcccccCcccchhhhhhhccCCHHHH
Q 019009 163 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 163 v~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
|++||. ++..+.++...|+++|++++.|++.++ ..||++++|+||++ .|+|...... ...........+|+++
T Consensus 387 V~~SS~-a~~~g~~g~~~YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~~-~~~~~~g~~~l~~e~~ 460 (511)
T 2z5l_A 387 VLFSSV-TGTWGNAGQGAYAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAGE-ESLSRRGLRAMDPDAA 460 (511)
T ss_dssp EEEEEG-GGTTCCTTBHHHHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHHH-HHHHHHTBCCBCHHHH
T ss_pred EEEeCH-HhcCCCCCCHHHHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccccH-HHHHhcCCCCCCHHHH
Confidence 999997 677888899999999999999988654 46999999999999 7887643211 1111122345689999
Q ss_pred HHHHhhhhhhcc
Q 019009 242 ARTLVPRIRVVK 253 (347)
Q Consensus 242 a~~~~~~~~~~~ 253 (347)
++.+...+...+
T Consensus 461 a~~l~~al~~~~ 472 (511)
T 2z5l_A 461 VDALLGAMGRND 472 (511)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHhCCC
Confidence 999998887544
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-26 Score=205.34 Aligned_cols=195 Identities=13% Similarity=0.122 Sum_probs=153.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||++|||++++++|+++|++|++++|++.+. .+.++.++.+|++|.+
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dl~d~~ 56 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP--------------------------AGPNEECVQCDLADAN 56 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC--------------------------CCTTEEEEECCTTCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc--------------------------cCCCCEEEEcCCCCHH
Confidence 58999999999999999999999999999999987542 1246889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++ ++|+||||||+.. .+.+++++++|+.|++++++++.+ . +.++||++||. +.
T Consensus 57 ~~~~~~~-------~~D~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~-~~ 114 (267)
T 3rft_A 57 AVNAMVA-------GCDGIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARA----H-GQPRIVFASSN-HT 114 (267)
T ss_dssp HHHHHHT-------TCSEEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEEEEG-GG
T ss_pred HHHHHHc-------CCCEEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEcch-HH
Confidence 9998876 6899999999732 234789999999999999999943 2 46799999986 23
Q ss_pred C------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHH
Q 019009 172 G------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE 239 (347)
Q Consensus 172 ~------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe 239 (347)
. .+.+....|++||++++.+++.++.++ |+++++|.||.+.+++..... . .....++
T Consensus 115 ~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~------~--~~~~~~~ 183 (267)
T 3rft_A 115 IGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM------L--STWFSHD 183 (267)
T ss_dssp GTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH------H--HHBCCHH
T ss_pred hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc------e--eeEEcHH
Confidence 2 233455789999999999999999886 789999999999887532111 1 1123688
Q ss_pred HHHHHHhhhhhhccccccceeeccchH
Q 019009 240 TVARTLVPRIRVVKGSGKAINYLTPPR 266 (347)
Q Consensus 240 ~~a~~~~~~~~~~~~~~~~~~~l~~~~ 266 (347)
++++.+...+. +++.+..+.|+.++.
T Consensus 184 d~a~~~~~~~~-~~~~~~~~~~~~s~~ 209 (267)
T 3rft_A 184 DFVSLIEAVFR-APVLGCPVVWGASAN 209 (267)
T ss_dssp HHHHHHHHHHH-CSCCCSCEEEECCCC
T ss_pred HHHHHHHHHHh-CCCCCceEEEEeCCC
Confidence 88887665544 455677778888765
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-24 Score=190.07 Aligned_cols=192 Identities=16% Similarity=0.091 Sum_probs=143.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee-eEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV-AGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dls~ 89 (347)
.+|++||||||||||++++++|+++|++|++++|+++++++.. . ..+ .++.+|++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~-------------------~~~~~~~~~Dl~- 75 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----E-------------------RGASDIVVANLE- 75 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----H-------------------TTCSEEEECCTT-
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----h-------------------CCCceEEEcccH-
Confidence 4699999999999999999999999999999999998765432 1 246 78999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+.+.+.++++|+||||||.... +++++.+++|+.+++.+++++... +.++||++||.+
T Consensus 76 --------~~~~~~~~~~D~vi~~ag~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~ 133 (236)
T 3e8x_A 76 --------EDFSHAFASIDAVVFAAGSGPH---------TGADKTILIDLWGAIKTIQEAEKR-----GIKRFIMVSSVG 133 (236)
T ss_dssp --------SCCGGGGTTCSEEEECCCCCTT---------SCHHHHHHTTTHHHHHHHHHHHHH-----TCCEEEEECCTT
T ss_pred --------HHHHHHHcCCCEEEECCCCCCC---------CCccccchhhHHHHHHHHHHHHHc-----CCCEEEEEecCC
Confidence 3344556789999999997431 357889999999999999988443 357999999973
Q ss_pred CCCCCC---CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh
Q 019009 170 SGGSST---PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 170 ~~~~~~---~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~ 246 (347)
...+. +....|+.+|++++.+.+ ..||++++|+||++.|+....................++++|+.++
T Consensus 134 -~~~~~~~~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 205 (236)
T 3e8x_A 134 -TVDPDQGPMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIA 205 (236)
T ss_dssp -CSCGGGSCGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHH
T ss_pred -CCCCCCChhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHH
Confidence 33332 456799999999999876 3689999999999999864322111110000122346899999998
Q ss_pred hhhhhccccc
Q 019009 247 PRIRVVKGSG 256 (347)
Q Consensus 247 ~~~~~~~~~~ 256 (347)
..+..++..+
T Consensus 206 ~~~~~~~~~g 215 (236)
T 3e8x_A 206 ELVDQQHTIG 215 (236)
T ss_dssp HHTTCGGGTT
T ss_pred HHhcCccccC
Confidence 8877654333
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.2e-23 Score=181.15 Aligned_cols=180 Identities=10% Similarity=0.090 Sum_probs=134.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFL-LSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la-~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|+++||||++|||++++++|+ ++|++|++++|+++ ++++.. . ...++.++.+|++|
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~-----------------~~~~~~~~~~D~~d 63 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I-----------------DHERVTVIEGSFQN 63 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H-----------------TSTTEEEEECCTTC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c-----------------CCCceEEEECCCCC
Confidence 4789999999999999999999 89999999999987 654432 1 23468889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++ ++|+||||||.. |+. ++.+++.|++. +.++||++||.
T Consensus 64 ~~~~~~~~~-------~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~-~~~~iv~iSs~- 109 (221)
T 3r6d_A 64 PGXLEQAVT-------NAEVVFVGAMES--------------------GSD-----MASIVKALSRX-NIRRVIGVSMA- 109 (221)
T ss_dssp HHHHHHHHT-------TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHT-TCCEEEEEEET-
T ss_pred HHHHHHHHc-------CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhc-CCCeEEEEeec-
Confidence 999988875 689999999852 222 88899999876 46899999987
Q ss_pred CCCCCCCCcc----------hhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-chhhhhhhccCCH
Q 019009 170 SGGSSTPLTA----------VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICELP 238 (347)
Q Consensus 170 ~~~~~~~~~~----------~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-~~~~~~~~~~~~p 238 (347)
......+... .|+.+|.+++.+.+. .||++++|+||++.++........ ............+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (221)
T 3r6d_A 110 GLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSR 182 (221)
T ss_dssp TTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECTTSCCCCCEEEH
T ss_pred eecCCCCcccccccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccCCccCCCceeeH
Confidence 4555445443 899999999987753 589999999999988732221111 1111111113467
Q ss_pred HHHHHHHhhhh--hhcc
Q 019009 239 ETVARTLVPRI--RVVK 253 (347)
Q Consensus 239 e~~a~~~~~~~--~~~~ 253 (347)
+++|+.++..+ ..+.
T Consensus 183 ~dvA~~~~~l~~~~~~~ 199 (221)
T 3r6d_A 183 EAVVKAIFDILHAADET 199 (221)
T ss_dssp HHHHHHHHHHHTCSCCG
T ss_pred HHHHHHHHHHHHhcChh
Confidence 99999988777 5544
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=238.47 Aligned_cols=180 Identities=16% Similarity=0.118 Sum_probs=141.2
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHH---HHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESV---RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.++.+|++|||||++|||+++|+.|+++|++ |++++|+..+. ++..+++++ .+.++.++
T Consensus 1880 ~~~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~g~~v~~~ 1942 (2512)
T 2vz8_A 1880 FCPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR-----------------QGVQVLVS 1942 (2512)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH-----------------TTCEEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh-----------------CCCEEEEE
Confidence 3567899999999999999999999999997 88899986544 334444443 45688999
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.||++|.++++++++++. ++|+||+||||||+.. ..++.+.+.|+|++++++|+.|++++.+++.|.|.+ .++||
T Consensus 1943 ~~Dvsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV 2017 (2512)
T 2vz8_A 1943 TSNASSLDGARSLITEAT-QLGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFV 2017 (2512)
T ss_dssp CCCSSSHHHHHHHHHHHH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEE
T ss_pred ecCCCCHHHHHHHHHHHH-hcCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEE
Confidence 999999999999999987 4799999999999876 578899999999999999999999999999999864 37999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV 214 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v 214 (347)
++||. ++..+.+++..|++||+++++|++.++.+ |+...++..|.+
T Consensus 2018 ~iSS~-ag~~g~~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2018 IFSSV-SCGRGNAGQANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp EECCH-HHHTTCTTCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred Eecch-hhcCCCCCcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence 99997 67788899999999999999999987765 667777777765
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-23 Score=193.51 Aligned_cols=188 Identities=13% Similarity=0.030 Sum_probs=147.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChhHH------------HHHHHHHHHHhhhhhhhcCCCCccccc
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFL-LSGDRVVVASRSSESV------------RMTVTELEENLKEGMMAAGGSSKKNLV 76 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la-~~G~~Vil~~R~~~~l------------~~~~~~l~~~~~~~~~~~~~~~~~~~~ 76 (347)
..+|++||||||+|||+|++..|+ +.|+.|++++++.+.. ....+++++ .
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~-----------------~ 110 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR-----------------E 110 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-----------------H
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH-----------------c
Confidence 357999999999999999999999 7899999998865422 233445544 5
Q ss_pred CceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCC------------CCC---------------------C
Q 019009 77 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG------------FKP---------------------L 123 (347)
Q Consensus 77 ~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~------------~~~---------------------~ 123 (347)
+.+...+.||++|.++++++++++.+++|+||+||||+|.... ..| +
T Consensus 111 G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l 190 (401)
T 4ggo_A 111 GLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISA 190 (401)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEE
T ss_pred CCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccc
Confidence 6789999999999999999999999999999999999997631 011 1
Q ss_pred CCCCHHHHHHHHHh---hhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCCC--cchhhhHHHHHHHHHHHHHhH
Q 019009 124 LQFTNEEIEQIVST---NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLRQLQASLFKE 198 (347)
Q Consensus 124 ~~~~~e~~~~~~~v---N~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~--~~~Y~asKaal~~~~~~La~e 198 (347)
...+.++++.+..+ ..++.+...+...+.|. +++++|.+|+.+ .....|. .+.++++|++|+..++.|+.|
T Consensus 191 ~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla---~G~siva~SYiG-se~t~P~Y~~G~mG~AKaaLEa~~r~La~e 266 (401)
T 4ggo_A 191 EPANDEEAAATVKVMGGEDWERWIKQLSKEGLLE---EGCITLAYSYIG-PEATQALYRKGTIGKAKEHLEATAHRLNKE 266 (401)
T ss_dssp CCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE---EEEEEEEEECCC-CGGGHHHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhccc---CCceEEEEeccC-cceeecCCCccHHHHHHHHHHHHHHHHHHh
Confidence 22456666665555 45556667777777775 478999999984 4444443 357899999999999999999
Q ss_pred hcCCCeEEEEeeCCcccCcccc
Q 019009 199 SKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 199 l~~~gI~v~~i~PG~v~T~~~~ 220 (347)
++ ++++++++||.+.|....
T Consensus 267 L~--~~~a~v~v~~a~vT~Ass 286 (401)
T 4ggo_A 267 NP--SIRAFVSVNKGLVTRASA 286 (401)
T ss_dssp CT--TEEEEEEECCCCCCTTGG
T ss_pred cC--CCcEEEEEcCccccchhh
Confidence 97 489999999999998653
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-23 Score=183.90 Aligned_cols=190 Identities=16% Similarity=0.108 Sum_probs=138.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|+++||||++|||++++++|+++|+ +|++++|+++++++. ....+.++.+|++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~D~~ 73 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-----------------------AYKNVNQEVVDFE 73 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-----------------------GGGGCEEEECCGG
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-----------------------ccCCceEEecCcC
Confidence 358999999999999999999999999 999999987653211 1125778899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++ ++|+||||||.... .+.++..+++|+.++..+++++. +. +.++||++||.
T Consensus 74 d~~~~~~~~~-------~~d~vi~~ag~~~~--------~~~~~~~~~~n~~~~~~~~~~~~----~~-~~~~iv~~SS~ 133 (242)
T 2bka_A 74 KLDDYASAFQ-------GHDVGFCCLGTTRG--------KAGAEGFVRVDRDYVLKSAELAK----AG-GCKHFNLLSSK 133 (242)
T ss_dssp GGGGGGGGGS-------SCSEEEECCCCCHH--------HHHHHHHHHHHTHHHHHHHHHHH----HT-TCCEEEEECCT
T ss_pred CHHHHHHHhc-------CCCEEEECCCcccc--------cCCcccceeeeHHHHHHHHHHHH----HC-CCCEEEEEccC
Confidence 9988877654 79999999996421 24568899999999988887754 33 35799999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCe-EEEEeeCCcccCcccccCcccc-hhhh----h----hhccCCH
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLLLSGSTIQ-NKQM----F----NIICELP 238 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI-~v~~i~PG~v~T~~~~~~~~~~-~~~~----~----~~~~~~p 238 (347)
+... +....|+++|++++.+++.+ ++ ++++|+||++.|++........ .... . ......+
T Consensus 134 -~~~~--~~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (242)
T 2bka_A 134 -GADK--SSNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPV 203 (242)
T ss_dssp -TCCT--TCSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEH
T ss_pred -cCCC--CCcchHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCH
Confidence 3332 23468999999999998754 45 8999999999998643211000 0000 0 1112367
Q ss_pred HHHHHHHhhhhhhcc
Q 019009 239 ETVARTLVPRIRVVK 253 (347)
Q Consensus 239 e~~a~~~~~~~~~~~ 253 (347)
+++|+.++..+..+.
T Consensus 204 ~dva~~~~~~~~~~~ 218 (242)
T 2bka_A 204 VTVVRAMLNNVVRPR 218 (242)
T ss_dssp HHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhCcc
Confidence 888888877766543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=189.52 Aligned_cols=206 Identities=14% Similarity=0.133 Sum_probs=155.1
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEe
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLS-GD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA 84 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~-G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (347)
..+..+|+||||||+|+||++++++|+++ |+ +|++++|++.+.++..+++. ..++.++.
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------------------~~~v~~~~ 76 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------------------DPRMRFFI 76 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------------------CTTEEEEE
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------------------CCCEEEEE
Confidence 34445699999999999999999999999 97 99999999887766554441 24688899
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 85 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 85 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
+|++|.+++.++++ ++|+||||||... .+. .....++.+++|+.|+.++++++.+. +.++||+
T Consensus 77 ~Dl~d~~~l~~~~~-------~~D~Vih~Aa~~~--~~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~ 139 (344)
T 2gn4_A 77 GDVRDLERLNYALE-------GVDICIHAAALKH--VPI---AEYNPLECIKTNIMGASNVINACLKN-----AISQVIA 139 (344)
T ss_dssp CCTTCHHHHHHHTT-------TCSEEEECCCCCC--HHH---HHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEE
T ss_pred CCCCCHHHHHHHHh-------cCCEEEECCCCCC--CCc---hhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEE
Confidence 99999998887764 6899999999743 111 12335689999999999999999874 3568999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc-----hh-------hhhh
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ-----NK-------QMFN 232 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~-----~~-------~~~~ 232 (347)
+||. .... ....|++||++.+.++++++.++.+.|+++++|.||.|.++.....+... .. ....
T Consensus 140 ~SS~-~~~~---p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~ 215 (344)
T 2gn4_A 140 LSTD-KAAN---PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMT 215 (344)
T ss_dssp ECCG-GGSS---CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCE
T ss_pred ecCC-ccCC---CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeE
Confidence 9986 3322 24689999999999999999998888999999999999886421000000 00 0000
Q ss_pred hccCCHHHHHHHHhhhhhhc
Q 019009 233 IICELPETVARTLVPRIRVV 252 (347)
Q Consensus 233 ~~~~~pe~~a~~~~~~~~~~ 252 (347)
.....++++|+.++..+..+
T Consensus 216 r~~i~v~D~a~~v~~~l~~~ 235 (344)
T 2gn4_A 216 RFWITLDEGVSFVLKSLKRM 235 (344)
T ss_dssp EEEECHHHHHHHHHHHHHHC
T ss_pred EeeEEHHHHHHHHHHHHhhc
Confidence 11246899999998877664
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.2e-22 Score=184.04 Aligned_cols=208 Identities=9% Similarity=0.044 Sum_probs=152.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE-ecCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-ACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl 87 (347)
+..+|++|||||+|+||++++++|+++|++|++++|+.++.+...+.+... .+.++.++ .+|+
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~~D~ 71 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK----------------YPGRFETAVVEDM 71 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----------------STTTEEEEECSCT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc----------------CCCceEEEEecCC
Confidence 345689999999999999999999999999999999988766555544331 12457777 8999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.++++++++ ++|+||||||.... . +++++.+++|+.++..+++++.+. . +.++||++||
T Consensus 72 ~d~~~~~~~~~-------~~d~vih~A~~~~~-~-------~~~~~~~~~n~~g~~~ll~~~~~~---~-~~~~iv~~SS 132 (342)
T 1y1p_A 72 LKQGAYDEVIK-------GAAGVAHIASVVSF-S-------NKYDEVVTPAIGGTLNALRAAAAT---P-SVKRFVLTSS 132 (342)
T ss_dssp TSTTTTTTTTT-------TCSEEEECCCCCSC-C-------SCHHHHHHHHHHHHHHHHHHHHTC---T-TCCEEEEECC
T ss_pred cChHHHHHHHc-------CCCEEEEeCCCCCC-C-------CCHHHHHHHHHHHHHHHHHHHHhC---C-CCcEEEEecc
Confidence 99988777653 69999999997541 1 235679999999999999988652 2 3579999998
Q ss_pred CCCCCCCC------------------------------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 168 AGSGGSST------------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 168 ~~~~~~~~------------------------------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
...-..+. .....|+.||++.+.+++.++.++.. +++++++.||.+.++
T Consensus 133 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~ 211 (342)
T 1y1p_A 133 TVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGT 211 (342)
T ss_dssp GGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECC
T ss_pred HHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECC
Confidence 63211111 12357999999999999999999876 899999999999998
Q ss_pred ccccCccc--chh---hh--------h----hhccCCHHHHHHHHhhhhhhc
Q 019009 218 LLLSGSTI--QNK---QM--------F----NIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 218 ~~~~~~~~--~~~---~~--------~----~~~~~~pe~~a~~~~~~~~~~ 252 (347)
........ ... .. . ......++++|+.++..+..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 263 (342)
T 1y1p_A 212 IFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP 263 (342)
T ss_dssp CSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred CCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc
Confidence 65432100 000 00 0 011235789999988777654
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=185.83 Aligned_cols=175 Identities=18% Similarity=0.059 Sum_probs=137.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+.+|+||||||+++||++++++|+++|++|++++|+.++.++..+++... .+.++.++.+|++|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d 66 (341)
T 3enk_A 3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI----------------TGKTPAFHETDVSD 66 (341)
T ss_dssp CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH----------------HSCCCEEECCCTTC
T ss_pred CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh----------------cCCCceEEEeecCC
Confidence 35689999999999999999999999999999999887766666666543 23468889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++. +++|+||||||.... . ...+..+..+++|+.+++.+++++ ++. +.++||++||..
T Consensus 67 ~~~~~~~~~~-----~~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~SS~~ 131 (341)
T 3enk_A 67 ERALARIFDA-----HPITAAIHFAALKAV-G----ESVAKPIEYYRNNLDSLLSLLRVM----RER-AVKRIVFSSSAT 131 (341)
T ss_dssp HHHHHHHHHH-----SCCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHH----HHT-TCCEEEEEEEGG
T ss_pred HHHHHHHHhc-----cCCcEEEECcccccc-C----ccccChHHHHHHHHHHHHHHHHHH----HhC-CCCEEEEEecce
Confidence 9999998875 479999999997531 1 123445678899999998877654 444 357999999852
Q ss_pred CCC-----------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 SGG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~~~-----------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.. .+......|+.||.+.+.+++.++.++. |++++++.|+.+..+.
T Consensus 132 -~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~ 188 (341)
T 3enk_A 132 -VYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAH 188 (341)
T ss_dssp -GBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCC
T ss_pred -EecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCc
Confidence 21 1122346899999999999999999863 5999999999987763
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-21 Score=180.26 Aligned_cols=173 Identities=14% Similarity=0.053 Sum_probs=135.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+||||||+|+||++++++|+++|++|++++|+. ...+...+++.. ..++.++.+|++|.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~------------------~~~~~~~~~Dl~d~ 62 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS------------------LGNFEFVHGDIRNK 62 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT------------------TCCCEEEECCTTCH
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc------------------CCceEEEEcCCCCH
Confidence 36899999999999999999999999999999853 222233333322 13578899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.. ++|+||||||.... +.+.++++..+++|+.++..+++++.+.+. .++||++||...
T Consensus 63 ~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v 128 (347)
T 1orr_A 63 NDVTRLITKY-----MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKV 128 (347)
T ss_dssp HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGG
T ss_pred HHHHHHHhcc-----CCCEEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHH
Confidence 9999888752 69999999996431 223456788999999999999999988753 368999998621
Q ss_pred -CC-------------------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 171 -GG-------------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 171 -~~-------------------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
+. .+.+....|+.+|++.+.+++.++.++ |+++++|.||.+.++..
T Consensus 129 ~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~ 200 (347)
T 1orr_A 129 YGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQ 200 (347)
T ss_dssp GTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred hCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence 10 122345689999999999999999886 79999999999999864
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-21 Score=171.27 Aligned_cols=198 Identities=12% Similarity=0.031 Sum_probs=138.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|+++||||+++||++++++|+++ |++|++++|+++++++. ..++.++.+|++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------------------------~~~~~~~~~D~~ 58 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------------------GGEADVFIGDIT 58 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------------------TCCTTEEECCTT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------------------------CCCeeEEEecCC
Confidence 3689999999999999999999999 89999999997654321 135678899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCC--------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG 160 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g 160 (347)
|.+++.++++ ++|+||||||....... ..+...+.+++.+++|+.++..+++++.+. +.+
T Consensus 59 d~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~ 126 (253)
T 1xq6_A 59 DADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVK 126 (253)
T ss_dssp SHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCS
T ss_pred CHHHHHHHHc-------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-----CCC
Confidence 9999888774 58999999997531110 012223445578899999999988887653 356
Q ss_pred EEEEEcCCCCCCCCCCCcc-----hhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc--chhhhh--
Q 019009 161 HIFNMDGAGSGGSSTPLTA-----VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMF-- 231 (347)
Q Consensus 161 ~Iv~vsS~~~~~~~~~~~~-----~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~--~~~~~~-- 231 (347)
+||++||.. +....+... .|+.+|.+++.+.+. .||++++|+||++.++........ ......
T Consensus 127 ~iv~~SS~~-~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~ 198 (253)
T 1xq6_A 127 HIVVVGSMG-GTNPDHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQT 198 (253)
T ss_dssp EEEEEEETT-TTCTTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGS
T ss_pred EEEEEcCcc-CCCCCCccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcCC
Confidence 899999873 433333333 356699999988752 689999999999998753211100 001111
Q ss_pred hhccCCHHHHHHHHhhhhhhc
Q 019009 232 NIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 232 ~~~~~~pe~~a~~~~~~~~~~ 252 (347)
......++++|+.++..+..+
T Consensus 199 ~~~~~~~~Dva~~~~~~~~~~ 219 (253)
T 1xq6_A 199 DTKTVPRADVAEVCIQALLFE 219 (253)
T ss_dssp SCCEEEHHHHHHHHHHHTTCG
T ss_pred CCcEEcHHHHHHHHHHHHcCc
Confidence 011236788888877666543
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=172.43 Aligned_cols=202 Identities=14% Similarity=0.069 Sum_probs=146.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++++|||||+|+||++++++|+++|++|++++|++++++. ....+.++.+|++|.+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------------------~~~~~~~~~~Dl~d~~ 59 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI------------------------ENEHLKVKKADVSSLD 59 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC------------------------CCTTEEEECCCTTCHH
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh------------------------ccCceEEEEecCCCHH
Confidence 5799999999999999999999999999999999775321 1246889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ ++|+||||||.... . ...+++|+.++..+++++.+ . +.+++|++||.+ .
T Consensus 60 ~~~~~~~-------~~d~vi~~a~~~~~-~----------~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~~-~ 115 (227)
T 3dhn_A 60 EVCEVCK-------GADAVISAFNPGWN-N----------PDIYDETIKVYLTIIDGVKK----A-GVNRFLMVGGAG-S 115 (227)
T ss_dssp HHHHHHT-------TCSEEEECCCC-----------------CCSHHHHHHHHHHHHHHH----T-TCSEEEEECCST-T
T ss_pred HHHHHhc-------CCCEEEEeCcCCCC-C----------hhHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCChh-h
Confidence 9888775 58999999986421 1 12678899998888877654 3 346899999873 3
Q ss_pred CCCC----------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh-----hhhccC
Q 019009 172 GSST----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM-----FNIICE 236 (347)
Q Consensus 172 ~~~~----------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~-----~~~~~~ 236 (347)
..+. .....|+.+|.+.+.+.+.++++ .|++++.+.||.+.++............. ......
T Consensus 116 ~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i 192 (227)
T 3dhn_A 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHI 192 (227)
T ss_dssp SEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEE
T ss_pred ccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEE
Confidence 2222 23568999999999999888764 58999999999998765322111100000 001123
Q ss_pred CHHHHHHHHhhhhhhccccccceeeccc
Q 019009 237 LPETVARTLVPRIRVVKGSGKAINYLTP 264 (347)
Q Consensus 237 ~pe~~a~~~~~~~~~~~~~~~~~~~l~~ 264 (347)
.++++|+.++..+..++..++....-.+
T Consensus 193 ~~~Dva~ai~~~l~~~~~~g~~~~~~~~ 220 (227)
T 3dhn_A 193 SVEDYAAAMIDELEHPKHHQERFTIGYL 220 (227)
T ss_dssp EHHHHHHHHHHHHHSCCCCSEEEEEECC
T ss_pred eHHHHHHHHHHHHhCccccCcEEEEEee
Confidence 6899999999999888776765554433
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=179.24 Aligned_cols=173 Identities=16% Similarity=0.116 Sum_probs=132.2
Q ss_pred CCCCCcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeE
Q 019009 3 SDNDEHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82 (347)
Q Consensus 3 ~~~~~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (347)
.++-....+.+++|||||+|+||++++++|+++|++|++++|+.+. +. .++.+
T Consensus 3 ~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------------------l~~~~ 55 (321)
T 2pk3_A 3 GSHHHHHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------------------PNVEM 55 (321)
T ss_dssp ----------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------------------TTEEE
T ss_pred CcccccccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------------------ceeeE
Confidence 3444455566999999999999999999999999999999998653 10 03678
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEE
Q 019009 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 162 (347)
Q Consensus 83 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~I 162 (347)
+.+|++|.+++.++++. +++|+||||||.... ..+.++++..+++|+.++..+++++ +.+. +.++|
T Consensus 56 ~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~---~~~~i 121 (321)
T 2pk3_A 56 ISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN---LDCRI 121 (321)
T ss_dssp EECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT---CCCEE
T ss_pred EECCCCCHHHHHHHHHh-----cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC---CCCeE
Confidence 89999999999988775 379999999997431 1222357889999999999999999 6552 35789
Q ss_pred EEEcCCCCCCC-------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 163 FNMDGAGSGGS-------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 163 v~vsS~~~~~~-------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
|++||. +... +.+....|+.+|++.+.+++.++.++ |++++.+.||.+.++...
T Consensus 122 v~~SS~-~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~ 188 (321)
T 2pk3_A 122 LTIGSS-EEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQS 188 (321)
T ss_dssp EEEEEG-GGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred EEEccH-HhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCC
Confidence 999986 2221 12345789999999999999999884 899999999999988643
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=174.56 Aligned_cols=182 Identities=15% Similarity=0.159 Sum_probs=139.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||+++||++++++|+++|++|++++|++++. ....+.++.+|++|.+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dl~d~~ 55 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA--------------------------AEAHEEIVACDLADAQ 55 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC--------------------------CCTTEEECCCCTTCHH
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc--------------------------cCCCccEEEccCCCHH
Confidence 47899999999999999999999999999999986531 0123678899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ ++|+||||||... .+.++..+++|+.++..+++++.+. +.++||++||.. .
T Consensus 56 ~~~~~~~-------~~d~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~-~ 113 (267)
T 3ay3_A 56 AVHDLVK-------DCDGIIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARNL-----GKPRIVFASSNH-T 113 (267)
T ss_dssp HHHHHHT-------TCSEEEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHHT-----TCCEEEEEEEGG-G
T ss_pred HHHHHHc-------CCCEEEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCCHH-H
Confidence 8888765 5899999999742 1345789999999999999988652 357899999862 2
Q ss_pred CCCCC------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc-cCcccccCcccchhhhhhhccCCH
Q 019009 172 GSSTP------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELP 238 (347)
Q Consensus 172 ~~~~~------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v-~T~~~~~~~~~~~~~~~~~~~~~p 238 (347)
....+ ....|+.+|++++.+++.++.+ .||++++|.||.+ .++.. ... ......+
T Consensus 114 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~-------~~~--~~~~~~~ 181 (267)
T 3ay3_A 114 IGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKD-------ARM--MATWLSV 181 (267)
T ss_dssp STTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCS-------HHH--HHHBCCH
T ss_pred hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCC-------CCe--eeccccH
Confidence 22111 2468999999999999988754 5899999999998 44321 111 1122478
Q ss_pred HHHHHHHhhhhhhcc
Q 019009 239 ETVARTLVPRIRVVK 253 (347)
Q Consensus 239 e~~a~~~~~~~~~~~ 253 (347)
+++|+.++..+..++
T Consensus 182 ~dva~~~~~~~~~~~ 196 (267)
T 3ay3_A 182 DDFMRLMKRAFVAPK 196 (267)
T ss_dssp HHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999988776553
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.7e-21 Score=170.51 Aligned_cols=180 Identities=9% Similarity=-0.011 Sum_probs=121.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|++|||||++|||++++++|+++| ++|++++|+++++++. ....+.++.+|++|.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~Dl~d~ 79 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-----------------------YPTNSQIIMGDVLNH 79 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-----------------------CCTTEEEEECCTTCH
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-----------------------ccCCcEEEEecCCCH
Confidence 5899999999999999999999999 8999999998754211 224688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++ ++|+||||||... ....++.+++.|++. +.++||++||. +
T Consensus 80 ~~~~~~~~-------~~D~vv~~a~~~~-----------------------~~~~~~~~~~~~~~~-~~~~iV~iSS~-~ 127 (236)
T 3qvo_A 80 AALKQAMQ-------GQDIVYANLTGED-----------------------LDIQANSVIAAMKAC-DVKRLIFVLSL-G 127 (236)
T ss_dssp HHHHHHHT-------TCSEEEEECCSTT-----------------------HHHHHHHHHHHHHHT-TCCEEEEECCC-C
T ss_pred HHHHHHhc-------CCCEEEEcCCCCc-----------------------hhHHHHHHHHHHHHc-CCCEEEEEecc-e
Confidence 99988875 6899999998521 013466888999887 46899999987 3
Q ss_pred CCCCCCCcc---------hhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH
Q 019009 171 GGSSTPLTA---------VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 171 ~~~~~~~~~---------~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
.....+... .|...+... ..++.+.||++++|+||++.|+....................++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~~~~~~~~~~i~~~Dv 200 (236)
T 3qvo_A 128 IYDEVPGKFVEWNNAVIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSV 200 (236)
T ss_dssp C----------------CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEECTTSCCSCSEEEHHHH
T ss_pred ecCCCCcccccchhhcccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEeccCCCCCCcEECHHHH
Confidence 333333211 111112111 1233467999999999999987543221111111111112478999
Q ss_pred HHHHhhhhhhcc
Q 019009 242 ARTLVPRIRVVK 253 (347)
Q Consensus 242 a~~~~~~~~~~~ 253 (347)
|+.++..+..+.
T Consensus 201 A~~i~~ll~~~~ 212 (236)
T 3qvo_A 201 AALITDIIDKPE 212 (236)
T ss_dssp HHHHHHHHHSTT
T ss_pred HHHHHHHHcCcc
Confidence 999988877665
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=181.13 Aligned_cols=176 Identities=15% Similarity=0.049 Sum_probs=139.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++||||||+|+||++++++|+++|++|++++|++++.+...+.+. ...++.++.+|++|.
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~d~ 69 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------------------VADGMQSEIGDIRDQ 69 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT------------------TTTTSEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc------------------cCCceEEEEccccCH
Confidence 35899999999999999999999999999999998765433332221 124678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.+ ++|+||||||... .+.+.++++..+++|+.++..+++++.+. . ..++||++||...
T Consensus 70 ~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~v~~SS~~v 135 (357)
T 1rkx_A 70 NKLLESIREF-----QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDKC 135 (357)
T ss_dssp HHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGGG
T ss_pred HHHHHHHHhc-----CCCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEecCHHH
Confidence 9999988765 6999999999632 12345667899999999999999999764 1 2578999998621
Q ss_pred -C-------CC---CCCCcchhhhHHHHHHHHHHHHHhHhc------CCCeEEEEeeCCcccCcc
Q 019009 171 -G-------GS---STPLTAVYGSTKCGLRQLQASLFKESK------RSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 -~-------~~---~~~~~~~Y~asKaal~~~~~~La~el~------~~gI~v~~i~PG~v~T~~ 218 (347)
+ .. +......|+.+|.+.+.+++.++.++. +.|++++++.||.+.++.
T Consensus 136 yg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~ 200 (357)
T 1rkx_A 136 YDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG 200 (357)
T ss_dssp BCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred hCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCC
Confidence 0 00 223456899999999999999999884 348999999999999875
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=180.39 Aligned_cols=211 Identities=13% Similarity=0.005 Sum_probs=150.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||+|+||++++++|+++|++|++++|++++.+. +.++... ...++.++.+|++|.+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~---------------~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG---------------IENDVKIIHMDLLEFS 65 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT---------------CTTTEEECCCCTTCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc---------------ccCceeEEECCCCCHH
Confidence 5899999999999999999999999999999998765321 1222210 1235788899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS- 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~- 170 (347)
++.++++.+ ++|+||||||.... +.+.++++..+++|+.+++++++++.+. . ..++||++||...
T Consensus 66 ~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~---~~~~iv~~SS~~vy 131 (345)
T 2z1m_A 66 NIIRTIEKV-----QPDEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRTV-K---PDTKFYQASTSEMF 131 (345)
T ss_dssp HHHHHHHHH-----CCSEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-C---TTCEEEEEEEGGGG
T ss_pred HHHHHHHhc-----CCCEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-C---CCceEEEEechhhc
Confidence 999988765 78999999997431 1223467889999999999999999853 1 1378999998621
Q ss_pred C---------CCCCCCcchhhhHHHHHHHHHHHHHhHhc---CCCeEEEEeeCCcccCcccccCc------------c-c
Q 019009 171 G---------GSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDLLLSGS------------T-I 225 (347)
Q Consensus 171 ~---------~~~~~~~~~Y~asKaal~~~~~~La~el~---~~gI~v~~i~PG~v~T~~~~~~~------------~-~ 225 (347)
+ ..+.+....|+.||++.+.+++.++.++. ..++.++.+.||...|.+..... . .
T Consensus 132 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (345)
T 2z1m_A 132 GKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLV 211 (345)
T ss_dssp CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEE
T ss_pred CCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeee
Confidence 0 12334557899999999999999999875 33467788899988776421100 0 0
Q ss_pred chhhhhhhccCCHHHHHHHHhhhhhhcc
Q 019009 226 QNKQMFNIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 226 ~~~~~~~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
............++++|+.++..+..+.
T Consensus 212 ~~~~~~~~~~~~v~Dva~a~~~~~~~~~ 239 (345)
T 2z1m_A 212 LGNLNAKRDWGYAPEYVEAMWLMMQQPE 239 (345)
T ss_dssp ESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred eCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence 0000000112368999999988776543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=168.67 Aligned_cols=184 Identities=18% Similarity=0.165 Sum_probs=139.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC-HHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE-PAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~ 92 (347)
+++||||+|+||++++++|+++|++|++++|+++++++ ..++.++.+|++| .++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------------------~~~~~~~~~D~~d~~~~ 56 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------------------------YNNVKAVHFDVDWTPEE 56 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------------------------CTTEEEEECCTTSCHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------------------------cCCceEEEecccCCHHH
Confidence 69999999999999999999999999999999865321 1358889999999 888
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++ ++|+||||||.... ..+++|+.++..+++++. +. +.++||++||. .+.
T Consensus 57 ~~~~~~-------~~d~vi~~ag~~~~-------------~~~~~n~~~~~~l~~a~~----~~-~~~~iv~~SS~-~~~ 110 (219)
T 3dqp_A 57 MAKQLH-------GMDAIINVSGSGGK-------------SLLKVDLYGAVKLMQAAE----KA-EVKRFILLSTI-FSL 110 (219)
T ss_dssp HHTTTT-------TCSEEEECCCCTTS-------------SCCCCCCHHHHHHHHHHH----HT-TCCEEEEECCT-TTT
T ss_pred HHHHHc-------CCCEEEECCcCCCC-------------CcEeEeHHHHHHHHHHHH----Hh-CCCEEEEECcc-ccc
Confidence 877664 69999999997541 167789999988888773 33 35699999997 444
Q ss_pred CCCCC-------cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 173 SSTPL-------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 173 ~~~~~-------~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
.+.+. ...|+.+|++.+.+.+ ...|++++.|+||++.++........ . ........++++|+.+
T Consensus 111 ~~~~~~e~~~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~-~--~~~~~~i~~~Dva~~i 181 (219)
T 3dqp_A 111 QPEKWIGAGFDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI-N--DEVSASNTIGDVADTI 181 (219)
T ss_dssp CGGGCCSHHHHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE-S--SSCCCCEEHHHHHHHH
T ss_pred CCCcccccccccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc-C--CCcCCcccHHHHHHHH
Confidence 44444 6789999999999886 35689999999999988753222111 0 1111223689999999
Q ss_pred hhhhhhcccccc
Q 019009 246 VPRIRVVKGSGK 257 (347)
Q Consensus 246 ~~~~~~~~~~~~ 257 (347)
+..+..++..+.
T Consensus 182 ~~~l~~~~~~g~ 193 (219)
T 3dqp_A 182 KELVMTDHSIGK 193 (219)
T ss_dssp HHHHTCGGGTTE
T ss_pred HHHHhCccccCc
Confidence 988876554343
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.7e-20 Score=175.77 Aligned_cols=181 Identities=11% Similarity=0.052 Sum_probs=135.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH----------------HHHHHHHHhhhhhhhcCCCCc
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM----------------TVTELEENLKEGMMAAGGSSK 72 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~----------------~~~~l~~~~~~~~~~~~~~~~ 72 (347)
...+.+||||||+|.||++++++|+++|++|++++|+.....+ ...++...
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------- 74 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL------------- 74 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH-------------
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc-------------
Confidence 3457899999999999999999999999999999987543211 11111111
Q ss_pred ccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH
Q 019009 73 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV 152 (347)
Q Consensus 73 ~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~ 152 (347)
.+.++.++.+|++|.+++.++++.. ++|+||||||... ......+++.++..+++|+.|+..+++++.+.
T Consensus 75 ---~~~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~--~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~ 144 (404)
T 1i24_A 75 ---TGKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF 144 (404)
T ss_dssp ---HCCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCceEEEECCCCCHHHHHHHHhcc-----CCCEEEECCCCCC--ccchhhCccchhhhHHHHHHHHHHHHHHHHHh
Confidence 1246788999999999999888754 6999999999753 11223367778889999999999999998764
Q ss_pred hHcCCCCcEEEEEcCCCC-CC----------------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEe
Q 019009 153 MRDQPKGGHIFNMDGAGS-GG----------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTA 209 (347)
Q Consensus 153 l~~~~~~g~Iv~vsS~~~-~~----------------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i 209 (347)
- .+.+||++||... +. .+......|+.||++.+.+++.++.++ |+++++|
T Consensus 145 ~----~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~iv 217 (404)
T 1i24_A 145 G----EECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDL 217 (404)
T ss_dssp C----TTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEE
T ss_pred C----CCcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEE
Confidence 1 1248999998621 11 122335689999999999999998886 7999999
Q ss_pred eCCcccCccc
Q 019009 210 SPGMVLTDLL 219 (347)
Q Consensus 210 ~PG~v~T~~~ 219 (347)
.||.|.++..
T Consensus 218 rp~~v~Gp~~ 227 (404)
T 1i24_A 218 NQGVVYGVKT 227 (404)
T ss_dssp EECEEECSCC
T ss_pred ecceeeCCCC
Confidence 9999988753
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-20 Score=175.27 Aligned_cols=176 Identities=13% Similarity=0.009 Sum_probs=132.2
Q ss_pred CeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChhH---------HHHHHHHHHHHhhhhhhhcCCCCcccccCce---
Q 019009 13 CRWFSVVSTRGLGKALAREFL-LSGDRVVVASRSSES---------VRMTVTELEENLKEGMMAAGGSSKKNLVHAK--- 79 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la-~~G~~Vil~~R~~~~---------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--- 79 (347)
++||||||+++||++++++|+ ++|++|++++|+... .+...+.+++.... ....+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 70 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP------------KPPWADRY 70 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSS------------CCTTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhcc------------ccccCCce
Confidence 589999999999999999999 999999999997654 33332223221000 00113
Q ss_pred eeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCC
Q 019009 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 159 (347)
Q Consensus 80 ~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~ 159 (347)
+.++.+|++|.+++.+++++ ++++|+||||||.... . .+.++++..+++|+.+++.+++++.. . +.
T Consensus 71 ~~~~~~Dl~d~~~~~~~~~~----~~~~d~vih~A~~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~ 136 (397)
T 1gy8_A 71 AALEVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLAV-G----ESVRDPLKYYDNNVVGILRLLQAMLL----H-KC 136 (397)
T ss_dssp CEEEESCTTCHHHHHHHHHH----SCCCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TC
T ss_pred EEEEECCCCCHHHHHHHHHh----cCCCCEEEECCCccCc-C----cchhhHHHHHHHHhHHHHHHHHHHHH----h-CC
Confidence 78899999999998887653 4569999999997431 1 13466788999999999999998643 2 35
Q ss_pred cEEEEEcCCCCCCCCCC------------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 160 GHIFNMDGAGSGGSSTP------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 160 g~Iv~vsS~~~~~~~~~------------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
++||++||. +...... ....|+.||++.+.+++.++.++ |++++++.||.+..+.
T Consensus 137 ~~iv~~SS~-~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 137 DKIIFSSSA-AIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH 209 (397)
T ss_dssp CEEEEEEEG-GGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred CEEEEECCH-HHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence 789999986 2221111 24689999999999999999987 7999999999997663
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-20 Score=174.08 Aligned_cols=176 Identities=13% Similarity=0.014 Sum_probs=133.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++||||||+|+||++++++|+++|++|++++|+.....+..+++.+..... ...++.++.+|++|.
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~ 93 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK------------QWSNFKFIQGDIRNL 93 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH------------HHTTEEEEECCTTSH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc------------cCCceEEEECCCCCH
Confidence 35899999999999999999999999999999997642111222222110000 013678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ ++|+||||||.... ..+.++++..+++|+.++..+++++.+. +.++||++||..
T Consensus 94 ~~~~~~~~-------~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~- 155 (352)
T 1sb8_A 94 DDCNNACA-------GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSS- 155 (352)
T ss_dssp HHHHHHHT-------TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGG-
T ss_pred HHHHHHhc-------CCCEEEECCcccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHH-
Confidence 98888765 79999999997431 1234567889999999999999998753 357899999863
Q ss_pred CCCCC-----------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 171 GGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 171 ~~~~~-----------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
..... .....|+.+|++.+.+++.++.++ |++++++.||.+.++..
T Consensus 156 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 212 (352)
T 1sb8_A 156 TYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQ 212 (352)
T ss_dssp GGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTC
T ss_pred hcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCC
Confidence 22111 135689999999999999999885 79999999999998864
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=176.19 Aligned_cols=207 Identities=12% Similarity=0.095 Sum_probs=149.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 14 RWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+||||||+|+||++++++|+++ |++|++++|+.. ..+.. +++. ...++.++.+|++|.
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~------------------~~~~~~~~~~Dl~d~ 62 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS------------------ESNRYNFEHADICDS 62 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT------------------TCTTEEEEECCTTCH
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh------------------cCCCeEEEECCCCCH
Confidence 5999999999999999999998 799999998752 11111 1110 124678899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC----CCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~----~~g~Iv~vs 166 (347)
+++.+++++. ++|+||||||... .+.+.++++..+++|+.+++++++++.+.|..-+ .+++||++|
T Consensus 63 ~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~S 132 (361)
T 1kew_A 63 AEITRIFEQY-----QPDAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIS 132 (361)
T ss_dssp HHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEE
T ss_pred HHHHHHHhhc-----CCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeC
Confidence 9999888752 7999999999743 1234456788999999999999999999985420 125999999
Q ss_pred CCCC-CCC-------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-
Q 019009 167 GAGS-GGS-------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI- 225 (347)
Q Consensus 167 S~~~-~~~-------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~- 225 (347)
|... +.. +.+....|+.||++.+.+++.++.++ |+++++|.||.|.++........
T Consensus 133 S~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~ 209 (361)
T 1kew_A 133 TDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIP 209 (361)
T ss_dssp EGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHH
T ss_pred CHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHH
Confidence 8521 111 12345789999999999999999886 79999999999999874321100
Q ss_pred -chhhhh-----h--------hccCCHHHHHHHHhhhhhhc
Q 019009 226 -QNKQMF-----N--------IICELPETVARTLVPRIRVV 252 (347)
Q Consensus 226 -~~~~~~-----~--------~~~~~pe~~a~~~~~~~~~~ 252 (347)
...... . .....++++|+.++..+..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 250 (361)
T 1kew_A 210 LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG 250 (361)
T ss_dssp HHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC
Confidence 000000 0 01135889999988777543
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=175.44 Aligned_cols=200 Identities=14% Similarity=0.086 Sum_probs=140.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.++++|||||+|+||++++++|+++|++|++++|+.+...+..+ .-.++.++.+|++|.
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------------------~l~~v~~~~~Dl~d~ 77 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---------------------PVAGLSVIEGSVTDA 77 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC---------------------SCTTEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh---------------------ccCCceEEEeeCCCH
Confidence 35899999999999999999999999999999997543211100 013577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++ ++|+||||||.... . +.++++ +++|+.+++.+++++... +.++||++||. +
T Consensus 78 ~~~~~~~~~~-----~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~-~ 138 (330)
T 2pzm_A 78 GLLERAFDSF-----KPTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASKA-----GVKRLLNFQTA-L 138 (330)
T ss_dssp HHHHHHHHHH-----CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHH-----TCSEEEEEEEG-G
T ss_pred HHHHHHHhhc-----CCCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHHc-----CCCEEEEecCH-H
Confidence 9999988765 79999999997542 1 345555 999999999999998742 35799999986 3
Q ss_pred CCCCC-----C------CcchhhhHHHHHHHHHHHHHhHhcCCCeE-EEEeeCCcccCcccccCccc--chhhhh----h
Q 019009 171 GGSST-----P------LTAVYGSTKCGLRQLQASLFKESKRSKVG-VHTASPGMVLTDLLLSGSTI--QNKQMF----N 232 (347)
Q Consensus 171 ~~~~~-----~------~~~~Y~asKaal~~~~~~La~el~~~gI~-v~~i~PG~v~T~~~~~~~~~--~~~~~~----~ 232 (347)
..... + ....|+.+|++++.+++.+ ++....|| ++.+.||. .|++....... ...... .
T Consensus 139 ~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~~~~~~~~~ 215 (330)
T 2pzm_A 139 CYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQKCFCSDTV 215 (330)
T ss_dssp GGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTCCCCEESCE
T ss_pred HhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCCEEeCCCCE
Confidence 32222 2 4578999999999999887 44444567 67777775 44432110000 000000 1
Q ss_pred hccCCHHHHHH-HHhhhhhhcc
Q 019009 233 IICELPETVAR-TLVPRIRVVK 253 (347)
Q Consensus 233 ~~~~~pe~~a~-~~~~~~~~~~ 253 (347)
.....++++|+ .++..+..+.
T Consensus 216 ~~~i~~~Dva~~a~~~~~~~~~ 237 (330)
T 2pzm_A 216 RDFLDMSDFLAIADLSLQEGRP 237 (330)
T ss_dssp ECEEEHHHHHHHHHHHTSTTCC
T ss_pred ecceeHHHHHHHHHHHHhhcCC
Confidence 12246899999 8887776543
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-19 Score=157.65 Aligned_cols=195 Identities=12% Similarity=0.121 Sum_probs=131.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+||||||||+||++++++|+++|++|++++|++++++.. . ..+.++.+|++|.++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------------------~-~~~~~~~~D~~d~~~- 56 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-----------------------H-KDINILQKDIFDLTL- 56 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-----------------------C-SSSEEEECCGGGCCH-
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-----------------------c-CCCeEEeccccChhh-
Confidence 589999999999999999999999999999998765432 1 357789999999887
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
+ .+.++|+||||||.... . .++| +..++.+++.+++. +.+++|++||.+ +..
T Consensus 57 -~-------~~~~~d~vi~~ag~~~~--~------------~~~~----~~~~~~l~~a~~~~-~~~~~v~~SS~~-~~~ 108 (221)
T 3ew7_A 57 -S-------DLSDQNVVVDAYGISPD--E------------AEKH----VTSLDHLISVLNGT-VSPRLLVVGGAA-SLQ 108 (221)
T ss_dssp -H-------HHTTCSEEEECCCSSTT--T------------TTSH----HHHHHHHHHHHCSC-CSSEEEEECCCC----
T ss_pred -h-------hhcCCCEEEECCcCCcc--c------------cchH----HHHHHHHHHHHHhc-CCceEEEEecce-EEE
Confidence 1 23579999999997431 0 1223 44566777777766 478999999873 322
Q ss_pred CCC------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCc-ccchhhh----hhhccC
Q 019009 174 STP------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS-TIQNKQM----FNIICE 236 (347)
Q Consensus 174 ~~~------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~-~~~~~~~----~~~~~~ 236 (347)
+.+ ....|+.+|.+.+.+ +.+.. ...|++++.|+||++.++...... ......+ ......
T Consensus 109 ~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~-~~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i 185 (221)
T 3ew7_A 109 IDEDGNTLLESKGLREAPYYPTARAQAKQL-EHLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFI 185 (221)
T ss_dssp ----------------CCCSCCHHHHHHHH-HHHHT--TTTTSCEEEEECSSCCCCC---------------------CC
T ss_pred cCCCCccccccCCCCCHHHHHHHHHHHHHH-HHHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceE
Confidence 221 235699999999887 33333 146899999999999886211110 0000000 001235
Q ss_pred CHHHHHHHHhhhhhhccccccceeeccc
Q 019009 237 LPETVARTLVPRIRVVKGSGKAINYLTP 264 (347)
Q Consensus 237 ~pe~~a~~~~~~~~~~~~~~~~~~~l~~ 264 (347)
.++++|+.++..+..++..++.+....+
T Consensus 186 ~~~Dva~~~~~~l~~~~~~g~~~~~~~~ 213 (221)
T 3ew7_A 186 SMEDYAIAVLDEIERPNHLNEHFTVAGK 213 (221)
T ss_dssp CHHHHHHHHHHHHHSCSCTTSEEECCC-
T ss_pred eHHHHHHHHHHHHhCccccCCEEEECCC
Confidence 7899999999999888777766554433
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6e-20 Score=172.11 Aligned_cols=172 Identities=15% Similarity=0.033 Sum_probs=131.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH------HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
+|++|||||+|+||++++++|+++|++|++++|+... ..+..+++.+. .+.++.++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~ 65 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL----------------TGRSVEFEEM 65 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH----------------HTCCCEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc----------------cCCceEEEEC
Confidence 4799999999999999999999999999999886432 22233334321 1246788999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|++|.++++++++.. ++|+||||||.... . .+.++++..+++|+.++..+++++.. . +.++||++
T Consensus 66 D~~~~~~~~~~~~~~-----~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~iv~~ 130 (348)
T 1ek6_A 66 DILDQGALQRLFKKY-----SFMAVIHFAGLKAV-G----ESVQKPLDYYRVNLTGTIQLLEIMKA----H-GVKNLVFS 130 (348)
T ss_dssp CTTCHHHHHHHHHHC-----CEEEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEE
T ss_pred CCCCHHHHHHHHHhc-----CCCEEEECCCCcCc-c----chhhchHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEE
Confidence 999999998887642 79999999997431 1 13456788999999999999887543 3 35789999
Q ss_pred cCCCCCCC-----------C-CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 166 DGAGSGGS-----------S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 166 sS~~~~~~-----------~-~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
||.. ... + .|....|+.+|++.+.+++.++.+ ..++++..+.|+.+..+
T Consensus 131 SS~~-~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 131 SSAT-VYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (348)
T ss_dssp EEGG-GGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred CcHH-HhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence 9863 211 1 133678999999999999999988 34699999999988765
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-19 Score=154.47 Aligned_cols=185 Identities=12% Similarity=-0.021 Sum_probs=131.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++++|||||++||++++++|+++|++|++++|++++++.. ...++.++.+|++|.++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~D~~~~~~ 60 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------------------GPRPAHVVVGDVLQAAD 60 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------------------SCCCSEEEESCTTSHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----------------------cCCceEEEEecCCCHHH
Confidence 7899999999999999999999999999999997653210 12467889999999998
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++ ++|++|||||.... .+. .++|+.++..+++++.+. +.++||++||. +..
T Consensus 61 ~~~~~~-------~~d~vi~~a~~~~~----~~~--------~~~n~~~~~~~~~~~~~~-----~~~~~v~~Ss~-~~~ 115 (206)
T 1hdo_A 61 VDKTVA-------GQDAVIVLLGTRND----LSP--------TTVMSEGARNIVAAMKAH-----GVDKVVACTSA-FLL 115 (206)
T ss_dssp HHHHHT-------TCSEEEECCCCTTC----CSC--------CCHHHHHHHHHHHHHHHH-----TCCEEEEECCG-GGT
T ss_pred HHHHHc-------CCCEEEECccCCCC----CCc--------cchHHHHHHHHHHHHHHh-----CCCeEEEEeee-eec
Confidence 888764 58999999997542 111 137778887777776543 35689999987 333
Q ss_pred CCCC----CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc-cCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 173 SSTP----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 173 ~~~~----~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
...+ ....|+.+|.+++.+.+. .|++++.+.||++ .++......... ..........++++|+.++.
T Consensus 116 ~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~~~~~ 187 (206)
T 1hdo_A 116 WDPTKVPPRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVTL-DGRGPSRVISKHDLGHFMLR 187 (206)
T ss_dssp SCTTCSCGGGHHHHHHHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEES-SSCSSCSEEEHHHHHHHHHH
T ss_pred cCcccccccchhHHHHHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEecc-cCCCCCCccCHHHHHHHHHH
Confidence 3222 567899999999998742 5899999999998 343321111000 00000123468899998887
Q ss_pred hhhhcc
Q 019009 248 RIRVVK 253 (347)
Q Consensus 248 ~~~~~~ 253 (347)
.+..++
T Consensus 188 ~~~~~~ 193 (206)
T 1hdo_A 188 CLTTDE 193 (206)
T ss_dssp TTSCST
T ss_pred HhcCcc
Confidence 776544
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-20 Score=170.67 Aligned_cols=194 Identities=16% Similarity=0.133 Sum_probs=137.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
.+||||||+|+||++++++|+++|++|++++|++++.+. + ...++.++.+|++|.++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l-------------------~~~~~~~~~~Dl~d~~~ 70 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----L-------------------AYLEPECRVAEMLDHAG 70 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----G-------------------GGGCCEEEECCTTCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----h-------------------ccCCeEEEEecCCCHHH
Confidence 489999999999999999999999999999998765321 1 11257788999999998
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++ ++|+|||+||... .+.++++..+++|+.++.++++++.+. +.++||++||. +..
T Consensus 71 ~~~~~~-------~~d~vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~-~~~ 130 (342)
T 2x4g_A 71 LERALR-------GLDGVIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSA-YAM 130 (342)
T ss_dssp HHHHTT-------TCSEEEEC-------------------CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCG-GGS
T ss_pred HHHHHc-------CCCEEEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCH-Hhh
Confidence 887764 6999999999632 234567889999999999999999875 24689999986 332
Q ss_pred CCCCC----------------cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc-ccCcccchhhhh----
Q 019009 173 SSTPL----------------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL-LSGSTIQNKQMF---- 231 (347)
Q Consensus 173 ~~~~~----------------~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~-~~~~~~~~~~~~---- 231 (347)
...+. ...|+.+|.+.+.+++.++. . |++++.|.||.+.++.. ............
T Consensus 131 ~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~ 206 (342)
T 2x4g_A 131 PRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEM 206 (342)
T ss_dssp CCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCC
T ss_pred CcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCC
Confidence 22222 56899999999999999886 3 79999999999998764 211110000000
Q ss_pred ------hhccCCHHHHHHHHhhhhhhcc
Q 019009 232 ------NIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 232 ------~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
......++++|+.++..+..+.
T Consensus 207 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~ 234 (342)
T 2x4g_A 207 THYVAGQRNVIDAAEAGRGLLMALERGR 234 (342)
T ss_dssp CEEECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred ccccCCCcceeeHHHHHHHHHHHHhCCC
Confidence 0012368899999987776554
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-19 Score=156.17 Aligned_cols=193 Identities=12% Similarity=0.060 Sum_probs=133.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||||+||++++++|+++|++|++++|+++++++. ....+.++.+|++|.++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~D~~d~~~- 57 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-----------------------LGATVATLVKEPLVLTE- 57 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------------------TCTTSEEEECCGGGCCH-
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-----------------------cCCCceEEecccccccH-
Confidence 599999999999999999999999999999998765432 12357889999999887
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
+.+.++|+||||||.... + .. .++|+.+ ++.+++.+++. + +++|++||.+ ...
T Consensus 58 --------~~~~~~d~vi~~ag~~~~--~--~~--------~~~n~~~----~~~l~~a~~~~-~-~~~v~~SS~~-~~~ 110 (224)
T 3h2s_A 58 --------ADLDSVDAVVDALSVPWG--S--GR--------GYLHLDF----ATHLVSLLRNS-D-TLAVFILGSA-SLA 110 (224)
T ss_dssp --------HHHTTCSEEEECCCCCTT--S--SC--------THHHHHH----HHHHHHTCTTC-C-CEEEEECCGG-GSB
T ss_pred --------hhcccCCEEEECCccCCC--c--ch--------hhHHHHH----HHHHHHHHHHc-C-CcEEEEecce-eec
Confidence 223579999999998521 1 00 2345555 46666667766 3 8999999863 322
Q ss_pred CCCC--------------cchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh----hhhcc
Q 019009 174 STPL--------------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM----FNIIC 235 (347)
Q Consensus 174 ~~~~--------------~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~----~~~~~ 235 (347)
..+. ...|+.+|++.+.+ +.+. ...|++++.|+||++.++............+ .....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~---~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~ 186 (224)
T 3h2s_A 111 MPGADHPMILDFPESAASQPWYDGALYQYYEY-QFLQ---MNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSH 186 (224)
T ss_dssp CTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-HHHT---TCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCB
T ss_pred cCCCCccccccCCCCCccchhhHHHHHHHHHH-HHHH---hcCCCcEEEEcCccccCCCcccCceecccccccCCCCCce
Confidence 2222 56799999998854 2222 3568999999999999873211110000000 01123
Q ss_pred CCHHHHHHHHhhhhhhccccccceee
Q 019009 236 ELPETVARTLVPRIRVVKGSGKAINY 261 (347)
Q Consensus 236 ~~pe~~a~~~~~~~~~~~~~~~~~~~ 261 (347)
..++++|+.++..+..++..++.+..
T Consensus 187 i~~~DvA~~~~~~l~~~~~~g~~~~~ 212 (224)
T 3h2s_A 187 ITTGNMALAILDQLEHPTAIRDRIVV 212 (224)
T ss_dssp CCHHHHHHHHHHHHHSCCCTTSEEEE
T ss_pred EeHHHHHHHHHHHhcCccccCCEEEE
Confidence 57999999999999887766655443
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-20 Score=173.49 Aligned_cols=202 Identities=11% Similarity=0.036 Sum_probs=145.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
++||||||+|+||++++++|+++| ++|++++|+.. ..+. .+++. ...++.++.+|++
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~------------------~~~~~~~~~~Dl~ 64 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLE------------------DDPRYTFVKGDVA 64 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTT------------------TCTTEEEEECCTT
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhc------------------cCCceEEEEcCCC
Confidence 579999999999999999999997 89999998642 1111 01110 1246788999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.+++++++ +++|+||||||... .+.+.++++..+++|+.++.++++++.+. . ..++||++||.
T Consensus 65 d~~~~~~~~-------~~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~--~~~~iv~~SS~ 128 (336)
T 2hun_A 65 DYELVKELV-------RKVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE--N--PEVRFVHVSTD 128 (336)
T ss_dssp CHHHHHHHH-------HTCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--C--TTSEEEEEEEG
T ss_pred CHHHHHHHh-------hCCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C--CCcEEEEeccH
Confidence 999988877 27999999999743 12234567889999999999999999887 1 24799999986
Q ss_pred CC-CCC---------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcc--cchhhhh-----
Q 019009 169 GS-GGS---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST--IQNKQMF----- 231 (347)
Q Consensus 169 ~~-~~~---------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~--~~~~~~~----- 231 (347)
.. +.. +.+....|+.||++.+.+++.++.++ |++++++.||.+.++....... .......
T Consensus 129 ~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~ 205 (336)
T 2hun_A 129 EVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKI 205 (336)
T ss_dssp GGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCE
T ss_pred HHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCc
Confidence 21 111 23445789999999999999999885 7999999999999886422110 0000000
Q ss_pred h--------hccCCHHHHHHHHhhhhhhc
Q 019009 232 N--------IICELPETVARTLVPRIRVV 252 (347)
Q Consensus 232 ~--------~~~~~pe~~a~~~~~~~~~~ 252 (347)
. .....++++|+.++..+..+
T Consensus 206 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 234 (336)
T 2hun_A 206 PIYGTGKNVRDWLYVEDHVRAIELVLLKG 234 (336)
T ss_dssp EEETC---CEEEEEHHHHHHHHHHHHHHC
T ss_pred eEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence 0 01135789999988776543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=170.85 Aligned_cols=174 Identities=11% Similarity=-0.017 Sum_probs=123.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
||++|||||+|+||++++++|+++|++|++++|+.+... +..+++.+... ..+.++.++.+|++|.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~Dl~d~ 67 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH-------------TCNPKFHLHYGDLSDT 67 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------------------CCEEECCCCSSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccc-------------cCCCceEEEECCCCCH
Confidence 589999999999999999999999999999999865421 11122211000 0124678889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.+ ++|+||||||.... ..+.++++..+++|+.++..+++++.+.+.+ +.++||++||..
T Consensus 68 ~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~iv~~SS~~- 134 (372)
T 1db3_A 68 SNLTRILREV-----QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSE- 134 (372)
T ss_dssp HHHHHHHHHH-----CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGG-
T ss_pred HHHHHHHHhc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCChh-
Confidence 9999988765 68999999997542 2233457889999999999999999876543 247899999862
Q ss_pred CCC-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcc
Q 019009 171 GGS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV 214 (347)
Q Consensus 171 ~~~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v 214 (347)
... +......|+.||++.+.+++.++.++ |+.+..+.|..+
T Consensus 135 v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~ 186 (372)
T 1db3_A 135 LYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNH 186 (372)
T ss_dssp GGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred hhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCc
Confidence 211 12235689999999999999999886 455555555444
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.1e-20 Score=172.59 Aligned_cols=201 Identities=10% Similarity=0.054 Sum_probs=145.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChhHH-HHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLS--GDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+|+||||||+|+||++++++|+++ |++|++++|+.... .+..+++ ...++.++.+|++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~~Dl~ 64 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-------------------LGDRVELVVGDIA 64 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-------------------CSSSEEEEECCTT
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh-------------------ccCCeEEEECCCC
Confidence 579999999999999999999998 89999999975311 0000110 1246788999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.+++.++++ .+|+||||||.... +.+.++++..+++|+.++..+++++.+. +++||++||.
T Consensus 65 d~~~~~~~~~-------~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~------~~~~v~~SS~ 126 (348)
T 1oc2_A 65 DAELVDKLAA-------KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTD 126 (348)
T ss_dssp CHHHHHHHHT-------TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEG
T ss_pred CHHHHHHHhh-------cCCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh------CCeEEEeccc
Confidence 9998888765 46999999997431 2234566789999999999999999875 2389999985
Q ss_pred CC-CCC---------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcc--
Q 019009 169 GS-GGS---------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST-- 224 (347)
Q Consensus 169 ~~-~~~---------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~-- 224 (347)
.. +.. +.+....|+.+|++.+.+++.++.++ |++++++.||.+.++.......
T Consensus 127 ~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~ 203 (348)
T 1oc2_A 127 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIP 203 (348)
T ss_dssp GGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHH
T ss_pred ceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHH
Confidence 21 111 22345689999999999999999886 7999999999999886431110
Q ss_pred cchhhhh-------------hhccCCHHHHHHHHhhhhhhc
Q 019009 225 IQNKQMF-------------NIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 225 ~~~~~~~-------------~~~~~~pe~~a~~~~~~~~~~ 252 (347)
....... ......++++|+.++..+..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 244 (348)
T 1oc2_A 204 RQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG 244 (348)
T ss_dssp HHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC
Confidence 0000000 001135789999988777543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.3e-20 Score=170.55 Aligned_cols=206 Identities=13% Similarity=0.056 Sum_probs=135.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
||+||||||+|+||++++++|+++|++|+++.| +++..++. ..+.+. +. ...++.++.+|++|.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~-~~-------------~~~~~~~~~~Dl~d~ 65 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNL-PG-------------ASEKLHFFNADLSNP 65 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTS-TT-------------HHHHEEECCCCTTCG
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhh-hc-------------cCCceEEEecCCCCH
Confidence 589999999999999999999999999999998 65321110 111110 00 012577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++ ++|+|||+|+.. ... ..+.++..+++|+.|++++++++.+.+ +.++||++||..
T Consensus 66 ~~~~~~~~-------~~d~vih~A~~~----~~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~----~~~~iV~~SS~~- 127 (322)
T 2p4h_X 66 DSFAAAIE-------GCVGIFHTASPI----DFA--VSEPEEIVTKRTVDGALGILKACVNSK----TVKRFIYTSSGS- 127 (322)
T ss_dssp GGGHHHHT-------TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS----SCCEEEEEEEGG-
T ss_pred HHHHHHHc-------CCCEEEEcCCcc----cCC--CCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEeccHH-
Confidence 99888764 589999999632 111 112245689999999999999986541 246899999863
Q ss_pred CCCCCC----------------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh
Q 019009 171 GGSSTP----------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 228 (347)
Q Consensus 171 ~~~~~~----------------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~ 228 (347)
+..+.+ ....|+.||.+.+.+++.++.+ .|+++++++||.+.+++..........
T Consensus 128 ~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~ 204 (322)
T 2p4h_X 128 AVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIE 204 (322)
T ss_dssp GTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHH
T ss_pred HcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHH
Confidence 211110 1116999999888777666554 589999999999999864322110000
Q ss_pred h----h------hh---hccCCHHHHHHHHhhhhhhcc
Q 019009 229 Q----M------FN---IICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 229 ~----~------~~---~~~~~pe~~a~~~~~~~~~~~ 253 (347)
. . .. .....++++|+.++..+..+.
T Consensus 205 ~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 242 (322)
T 2p4h_X 205 KALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSV 242 (322)
T ss_dssp HHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCC
T ss_pred HHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcC
Confidence 0 0 00 013468999999887775543
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=171.14 Aligned_cols=160 Identities=13% Similarity=0.063 Sum_probs=122.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhhhhhhhcCCCCcccccCc-eeeEEecC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHA-KVAGIACD 86 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D 86 (347)
|+||||||+|+||.++++.|+++|++|++++|+.++ ++...+++.. .+. ++.++.+|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~D 91 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-----------------VNKALMKLHYAD 91 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-------------------------CCEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc-----------------ccccceEEEECC
Confidence 799999999999999999999999999999998653 2211111110 112 67889999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++|.+++.++++.+ ++|+||||||.... ..+.++++..+++|+.++..+++++.+...++++.++||++|
T Consensus 92 l~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~S 161 (381)
T 1n7h_A 92 LTDASSLRRWIDVI-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG 161 (381)
T ss_dssp TTCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred CCCHHHHHHHHHhc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeC
Confidence 99999999988765 68999999997431 133466889999999999999999999876533356999999
Q ss_pred CCCC-CC--------CCCCCcchhhhHHHHHHHHHHHHHhHh
Q 019009 167 GAGS-GG--------SSTPLTAVYGSTKCGLRQLQASLFKES 199 (347)
Q Consensus 167 S~~~-~~--------~~~~~~~~Y~asKaal~~~~~~La~el 199 (347)
|... +. .+......|+.+|++.+.+++.++.++
T Consensus 162 S~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 203 (381)
T 1n7h_A 162 SSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 203 (381)
T ss_dssp EGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 8621 11 023345789999999999999999886
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=168.75 Aligned_cols=206 Identities=11% Similarity=0.045 Sum_probs=143.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+||||||+|+||++++++|+++|++|+++.|+.+..++.. .+.+. .. ...++.++.+|++|.
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~-------------~~~~~~~~~~Dl~d~ 68 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDL-PK-------------AETHLTLWKADLADE 68 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTS-TT-------------HHHHEEEEECCTTST
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhc-cc-------------CCCeEEEEEcCCCCH
Confidence 4689999999999999999999999999999999876543221 11110 00 013577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ ++|+|||+|+... .... +..+..+++|+.|+.++++++.+.. ..++||++||..
T Consensus 69 ~~~~~~~~-------~~d~Vih~A~~~~----~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~~- 130 (337)
T 2c29_D 69 GSFDEAIK-------GCTGVFHVATPMD----FESK--DPENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSAG- 130 (337)
T ss_dssp TTTHHHHT-------TCSEEEECCCCCC----SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCGG-
T ss_pred HHHHHHHc-------CCCEEEEeccccC----CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeHh-
Confidence 98887764 5899999998531 2222 2235789999999999999988753 246899999863
Q ss_pred CCCCC----------------------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh
Q 019009 171 GGSST----------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 228 (347)
Q Consensus 171 ~~~~~----------------------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~ 228 (347)
+..+. +....|+.||.+.+.+++.++.+ .|+++++|.||.|.+|...........
T Consensus 131 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~ 207 (337)
T 2c29_D 131 TVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLI 207 (337)
T ss_dssp GTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHH
T ss_pred hcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHH
Confidence 21110 12236999999999998887765 389999999999999864322111000
Q ss_pred ----------hhhh----hccCCHHHHHHHHhhhhhhc
Q 019009 229 ----------QMFN----IICELPETVARTLVPRIRVV 252 (347)
Q Consensus 229 ----------~~~~----~~~~~pe~~a~~~~~~~~~~ 252 (347)
.... .....++++|+.++..+..+
T Consensus 208 ~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 245 (337)
T 2c29_D 208 TALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENP 245 (337)
T ss_dssp HHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCT
T ss_pred HHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcCc
Confidence 0000 01346899999988776544
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6.3e-19 Score=165.19 Aligned_cols=155 Identities=8% Similarity=-0.009 Sum_probs=123.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|+||||||+|+||.+++++|+++|++|++++|+++. .++.++.+|++|
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------------------~~~~~~~~Dl~d 67 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------------------TGGEEVVGSLED 67 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------------------SCCSEEESCTTC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------------------CCccEEecCcCC
Confidence 456899999999999999999999999999999998653 246788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++ ++|+|||+||... .+.+.++..+++|+.++..+++++.. . +.++||++||..
T Consensus 68 ~~~~~~~~~-------~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~----~-~~~~~V~~SS~~ 128 (347)
T 4id9_A 68 GQALSDAIM-------GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASA----A-GVRRFVFASSGE 128 (347)
T ss_dssp HHHHHHHHT-------TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEEGG
T ss_pred HHHHHHHHh-------CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEECCHH
Confidence 999888765 7999999998743 12234589999999999999998754 2 356899999852
Q ss_pred CC------------CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCccc
Q 019009 170 SG------------GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 215 (347)
Q Consensus 170 ~~------------~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~ 215 (347)
.- ..+......|+.+|.+.+.+++.++.+ .|++++.+.|+.+.
T Consensus 129 vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 129 VYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQ 183 (347)
T ss_dssp GTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEE
T ss_pred HhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEe
Confidence 11 112234568999999999999999887 48999999999987
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=170.11 Aligned_cols=170 Identities=13% Similarity=0.113 Sum_probs=129.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSG-------DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G-------~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.+++||||||+|+||++++++|+++| ++|++++|+.++... . ...++.++
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~-----------------~~~~~~~~ 69 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G-----------------FSGAVDAR 69 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T-----------------CCSEEEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c-----------------cCCceeEE
Confidence 46899999999999999999999999 899999998653211 0 23468889
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.+|++|.++++++++ +++|+||||||... ..+.++++..+++|+.++..+++++.+...+.+..++||
T Consensus 70 ~~Dl~d~~~~~~~~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv 137 (342)
T 2hrz_A 70 AADLSAPGEAEKLVE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVV 137 (342)
T ss_dssp ECCTTSTTHHHHHHH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred EcCCCCHHHHHHHHh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEE
Confidence 999999999888775 37999999999642 123567889999999999999999987643211146899
Q ss_pred EEcCCCCCCCCC-C----------CcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEee--CCcccC
Q 019009 164 NMDGAGSGGSST-P----------LTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTAS--PGMVLT 216 (347)
Q Consensus 164 ~vsS~~~~~~~~-~----------~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~--PG~v~T 216 (347)
++||. +..... + ....|+.||++.+.+++.++.+.. ...+|++.|. ||.+.+
T Consensus 138 ~~SS~-~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~ 204 (342)
T 2hrz_A 138 FTSSI-AVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNA 204 (342)
T ss_dssp EEEEG-GGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCC
T ss_pred EeCch-HhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcc
Confidence 99987 332221 1 456899999999999999887641 2346777776 887654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-19 Score=166.83 Aligned_cols=176 Identities=11% Similarity=0.028 Sum_probs=135.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+||||||||+||++++++|+++|++|++++|+........+.+....... ...++.++.+|++|.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~ 91 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTE------------QWSRFCFIEGDIRDL 91 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHH------------HHTTEEEEECCTTCH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccc------------cCCceEEEEccCCCH
Confidence 46899999999999999999999999999999997765444444444311000 014688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ ++|+|||+||.... ..+.++.+..+++|+.++..+++++... +.+++|++||..
T Consensus 92 ~~~~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~- 153 (351)
T 3ruf_A 92 TTCEQVMK-------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNA-----QVQSFTYAASSS- 153 (351)
T ss_dssp HHHHHHTT-------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGG-
T ss_pred HHHHHHhc-------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEecHH-
Confidence 98888765 79999999996431 2234566789999999999999887543 346899999862
Q ss_pred CCCCC-----------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 171 GGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 171 ~~~~~-----------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
..... .....|+.+|.+.+.+++.++.+. |++++.+.||.+..+..
T Consensus 154 vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 210 (351)
T 3ruf_A 154 TYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQ 210 (351)
T ss_dssp GGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTC
T ss_pred hcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCC
Confidence 22111 124689999999999999999885 79999999999987753
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=172.09 Aligned_cols=175 Identities=14% Similarity=0.087 Sum_probs=126.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh---HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.+|+||||||+|+||++++++|+++|++|++++|+++ .++...+.++....... ......++.++.+|+
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~--------~~~~~~~v~~v~~Dl 139 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEET--------VEMMLSNIEVIVGDF 139 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHH--------HHHHHTTEEEEEECC
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccc--------cccccCceEEEeCCC
Confidence 4589999999999999999999999999999999987 33344444433210000 000235788999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.+++. .++++|+||||||... ..++++..+++|+.++.++++++.+ ..++||++||
T Consensus 140 ~d~~~l~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~------~~~~~v~~SS 197 (427)
T 4f6c_A 140 ECMDDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVST 197 (427)
T ss_dssp ---CCCC--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH------TTCEEEEEEE
T ss_pred CCcccCC--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh------cCCcEEEECc
Confidence 9988777 4568999999999743 1256788999999999999999877 2468999998
Q ss_pred CCCCCC-----------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 168 AGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 168 ~~~~~~-----------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
...+.. +......|+.+|.+.+.+++.++. .|+++++|.||.|.++..
T Consensus 198 ~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~ 262 (427)
T 4f6c_A 198 ISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYN 262 (427)
T ss_dssp GGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSS
T ss_pred hHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCC
Confidence 743110 122567899999999999998764 589999999999988754
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=165.34 Aligned_cols=165 Identities=13% Similarity=0.086 Sum_probs=127.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||+|+||++++++|+++|++|++++|......+ . ....+.++.+|++|.+++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~--------------------~~~~~~~~~~Dl~~~~~~ 58 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---N--------------------VPKGVPFFRVDLRDKEGV 58 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---G--------------------SCTTCCEECCCTTCHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---h--------------------cccCeEEEECCCCCHHHH
Confidence 68999999999999999999999999999985432100 0 112466789999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC--C
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--G 171 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~--~ 171 (347)
+++++.. ++|++||+||.... ..+.++++..+++|+.+++++++++.. . +.++||++||.++ +
T Consensus 59 ~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~~~~~g 123 (311)
T 2p5y_A 59 ERAFREF-----RPTHVSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQ----Y-GVEKLVFASTGGAIYG 123 (311)
T ss_dssp HHHHHHH-----CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEEHHHHHC
T ss_pred HHHHHhc-----CCCEEEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCChhhcC
Confidence 8887642 68999999986431 134466788999999999999998753 2 3468999998611 1
Q ss_pred C--C--------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 172 G--S--------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 172 ~--~--------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
. . +......|+.||++++.+++.++.++ |++++.+.||.+.+|..
T Consensus 124 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~ 178 (311)
T 2p5y_A 124 EVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQ 178 (311)
T ss_dssp CCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred CCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCC
Confidence 1 0 11235689999999999999999885 79999999999988753
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-19 Score=166.01 Aligned_cols=162 Identities=13% Similarity=0.098 Sum_probs=123.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+||||||+|+||++++++|+++|..|++..|+....+. ....+.++.+|+++ +
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~------------------------~~~~~~~~~~Dl~~-~ 55 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF------------------------VNEAARLVKADLAA-D 55 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG------------------------SCTTEEEECCCTTT-S
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh------------------------cCCCcEEEECcCCh-H
Confidence 3789999999999999999999999555555554432110 12457889999999 8
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ ++|++||+||... ...+.++++..+++|+.++..+++++... +.++||++||...-
T Consensus 56 ~~~~~~~-------~~d~vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~iv~~SS~~vy 118 (313)
T 3ehe_A 56 DIKDYLK-------GAEEVWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRKA-----GVSRIVFTSTSTVY 118 (313)
T ss_dssp CCHHHHT-------TCSEEEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGG
T ss_pred HHHHHhc-------CCCEEEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCchHHh
Confidence 8777664 7999999998643 13344567889999999999999886542 35689999986211
Q ss_pred ----------CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 172 ----------GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 ----------~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
..+......|+.+|.+.+.+++.++.++ |++++.+.|+.+.++.
T Consensus 119 g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~ 172 (313)
T 3ehe_A 119 GEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRR 172 (313)
T ss_dssp CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTT
T ss_pred CcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcC
Confidence 0133345789999999999999999885 8999999999998874
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.5e-19 Score=168.12 Aligned_cols=173 Identities=12% Similarity=-0.036 Sum_probs=129.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
|++|||||+|+||++++++|+++|++|++++|+.+. ++...+++... ...++.++.+|+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~----------------~~~~~~~~~~Dl 88 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH----------------IEGNMKLHYGDL 88 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-------------------------CEEEEECCT
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc----------------cCCCceEEEccC
Confidence 789999999999999999999999999999998643 11111111000 123578899999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.+++.++++.+ ++|+||||||.... ..+.++++..+++|+.++..+++++.+...+ +.++||++||
T Consensus 89 ~d~~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~--~~~~iv~~SS 156 (375)
T 1t2a_A 89 TDSTCLVKIINEV-----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQAST 156 (375)
T ss_dssp TCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEE
T ss_pred CCHHHHHHHHHhc-----CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC--ccceEEEecc
Confidence 9999999988765 68999999997431 1234667889999999999999999876542 2378999998
Q ss_pred CCCCCC-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 168 AGSGGS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 168 ~~~~~~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
.. ... +......|+.+|++.+.+++.++.++ |+.+..+.|+.+..|
T Consensus 157 ~~-~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp 213 (375)
T 1t2a_A 157 SE-LYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP 213 (375)
T ss_dssp GG-GTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred hh-hhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCC
Confidence 62 221 12235689999999999999999875 677777777665544
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=167.87 Aligned_cols=194 Identities=14% Similarity=0.054 Sum_probs=141.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++||||||||+||++++++|+++|++|++++|+.+...+. ....+.++.+|++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~Dl~d~~- 56 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-----------------------VNPSAELHVRDLKDYS- 56 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-----------------------SCTTSEEECCCTTSTT-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-----------------------cCCCceEEECccccHH-
Confidence 4799999999999999999999999999999986542211 1245778999999987
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++ . |+|||+||... ...+.++++..+++|+.++.++++++... +.++||++||...-.
T Consensus 57 ~~~~~~-------~-d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~vyg 118 (312)
T 3ko8_A 57 WGAGIK-------G-DVVFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT-----GVRTVVFASSSTVYG 118 (312)
T ss_dssp TTTTCC-------C-SEEEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGC
T ss_pred HHhhcC-------C-CEEEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeCcHHHhC
Confidence 655432 3 99999999643 13344567889999999999999988543 356899999862110
Q ss_pred ----------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-chhhhh---h------
Q 019009 173 ----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMF---N------ 232 (347)
Q Consensus 173 ----------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-~~~~~~---~------ 232 (347)
.+......|+.+|.+.+.+++.++.++ |++++.+.||.+.++........ ...... .
T Consensus 119 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (312)
T 3ko8_A 119 DADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLG 195 (312)
T ss_dssp SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC-
T ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcC
Confidence 122345789999999999999999986 79999999999998864321100 000000 0
Q ss_pred -----hccCCHHHHHHHHhhhhhh
Q 019009 233 -----IICELPETVARTLVPRIRV 251 (347)
Q Consensus 233 -----~~~~~pe~~a~~~~~~~~~ 251 (347)
.....++++|+.++..+..
T Consensus 196 ~g~~~~~~i~v~Dva~a~~~~~~~ 219 (312)
T 3ko8_A 196 DGTQRKSYLYVRDAVEATLAAWKK 219 (312)
T ss_dssp ---CEECEEEHHHHHHHHHHHHHH
T ss_pred CCCeEEeeEEHHHHHHHHHHHHHh
Confidence 0112478999999887776
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.4e-19 Score=164.10 Aligned_cols=170 Identities=15% Similarity=0.096 Sum_probs=124.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||+|+||++++++|+++|++|++++|......+..+++.+. .+.++.++.+|++|.+++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~~~~~ 65 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALM 65 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH----------------HTSCCEEEECCTTCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh----------------cCCcceEEEccCCCHHHH
Confidence 6899999999999999999999999999987532211222233221 123577889999999998
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC-
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG- 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~- 172 (347)
+++++.. ++|+||||||.... . ...++.+..+++|+.+++.+++++.. . +.++||++||...-.
T Consensus 66 ~~~~~~~-----~~D~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~iv~~SS~~~~g~ 130 (338)
T 1udb_A 66 TEILHDH-----AIDTVIHFAGLKAV-G----ESVQKPLEYYDNNVNGTLRLISAMRA----A-NVKNFIFSSSATVYGD 130 (338)
T ss_dssp HHHHHHT-----TCSEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEEEEGGGGCS
T ss_pred HHHhhcc-----CCCEEEECCccCcc-c----cchhcHHHHHHHHHHHHHHHHHHHHh----c-CCCeEEEEccHHHhCC
Confidence 8887642 69999999997431 1 12344567899999999999886543 2 356899999862110
Q ss_pred ---------CCC-CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccC
Q 019009 173 ---------SST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216 (347)
Q Consensus 173 ---------~~~-~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T 216 (347)
.+. |....|+.||++++.+++.++.+. .|+++..+.|+.+..
T Consensus 131 ~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G 182 (338)
T 1udb_A 131 NPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVG 182 (338)
T ss_dssp CCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEEC
T ss_pred CCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecC
Confidence 011 236789999999999999999884 378998888866543
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-19 Score=170.05 Aligned_cols=166 Identities=12% Similarity=-0.009 Sum_probs=130.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++||||||+|+||++++++|+++|++|++++|+..+.... ...++.++.+|++|.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------------~~~~v~~~~~Dl~d~ 84 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-----------------------DMFCDEFHLVDLRVM 84 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-----------------------GGTCSEEEECCTTSH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-----------------------ccCCceEEECCCCCH
Confidence 468999999999999999999999999999999986542110 113577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ ++|+|||+||.... ..+ +.++++..+++|+.++..+++++... +.++||++||..
T Consensus 85 ~~~~~~~~-------~~d~Vih~A~~~~~-~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~~V~~SS~~- 147 (379)
T 2c5a_A 85 ENCLKVTE-------GVDHVFNLAADMGG-MGF---IQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSAC- 147 (379)
T ss_dssp HHHHHHHT-------TCSEEEECCCCCCC-HHH---HTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGG-
T ss_pred HHHHHHhC-------CCCEEEECceecCc-ccc---cccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeehh-
Confidence 99888764 69999999997431 111 12456789999999999999988542 346899999862
Q ss_pred CCC------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 171 GGS------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 171 ~~~------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
... +......|+.+|.+.+.+++.++.++ |+++++|.||.+.++..
T Consensus 148 v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~ 211 (379)
T 2c5a_A 148 IYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG 211 (379)
T ss_dssp GSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred eeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCC
Confidence 211 22335689999999999999998875 79999999999988753
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-19 Score=163.84 Aligned_cols=165 Identities=14% Similarity=0.041 Sum_probs=128.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++|||||+|+||++++++|+++|++|++++|+..... +. ...++.++.+|++|.+
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~--------------------~~~~~~~~~~D~~~~~ 57 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA--------------------ITEGAKFYNGDLRDKA 57 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG--------------------SCTTSEEEECCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh--------------------cCCCcEEEECCCCCHH
Confidence 378999999999999999999999999999999764321 00 1125778899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++++++++ .++|+|||+||.... ..+.++++..+++|+.++..+++++.. . +.+++|++||.. .
T Consensus 58 ~~~~~~~~-----~~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~-~ 121 (330)
T 2c20_A 58 FLRDVFTQ-----ENIEAVMHFAADSLV-----GVSMEKPLQYYNNNVYGALCLLEVMDE----F-KVDKFIFSSTAA-T 121 (330)
T ss_dssp HHHHHHHH-----SCEEEEEECCCCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGG-G
T ss_pred HHHHHHhh-----cCCCEEEECCcccCc-----cccccCHHHHHHHHhHHHHHHHHHHHH----c-CCCEEEEeCCce-e
Confidence 98888764 379999999997431 113456788999999999999988643 2 356899999862 2
Q ss_pred CC-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 172 GS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 ~~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.. +......|+.+|.+.+.+++.++.++ |++++.+.||.+.++.
T Consensus 122 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 122 YGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT 176 (330)
T ss_dssp GCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred eCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence 11 11235789999999999999998874 8999999999987763
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-19 Score=164.70 Aligned_cols=173 Identities=14% Similarity=-0.030 Sum_probs=128.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+.+++||||||+|+||++++++|+++|++|++++|+.++.. ...+.+. ...++.++.+|++
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~ 73 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG------------------IEGDIQYEDGDMA 73 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT------------------CGGGEEEEECCTT
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc------------------ccCceEEEECCCC
Confidence 55799999999999999999999999999999999865421 1111110 1235788999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.+++.++++.+ ++|+||||||.... ..+.++.+..+++|+.++..+++++.+. +..++||++||.
T Consensus 74 d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~ 139 (335)
T 1rpn_A 74 DACSVQRAVIKA-----QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTS 139 (335)
T ss_dssp CHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEG
T ss_pred CHHHHHHHHHHc-----CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCH
Confidence 999999988765 68999999996431 1112346789999999999999998764 113689999986
Q ss_pred CCCCCC-----------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 169 GSGGSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 169 ~~~~~~-----------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. .... ......|+.+|.+.+.+++.++.++ |+.+..+.|+.+..+.
T Consensus 140 ~-v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~ 196 (335)
T 1rpn_A 140 E-MFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL 196 (335)
T ss_dssp G-GGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred H-HhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCC
Confidence 2 2111 1124589999999999999999875 6788888888776553
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.7e-19 Score=164.53 Aligned_cols=208 Identities=9% Similarity=0.022 Sum_probs=141.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..+++||||||||+||.+++++|+++| ++|+..+|...... .+.+.... ...++.++.+|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~---------------~~~~~~~~~~Dl 84 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQ---------------DHPNYYFVKGEI 84 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTT---------------TCTTEEEEECCT
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhc---------------cCCCeEEEEcCC
Confidence 446899999999999999999999999 67877777642110 01111100 124688999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.+++.++++.. ++|+|||+||.... ..+.++.+..+++|+.++..+++++.+. +.+++|++||
T Consensus 85 ~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS 149 (346)
T 4egb_A 85 QNGELLEHVIKER-----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKKY-----PHIKLVQVST 149 (346)
T ss_dssp TCHHHHHHHHHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS-----TTSEEEEEEE
T ss_pred CCHHHHHHHHhhc-----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCc
Confidence 9999999988763 69999999997542 2244667889999999999999887553 3568999998
Q ss_pred CCCCCCC------------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc--chhhh---
Q 019009 168 AGSGGSS------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQM--- 230 (347)
Q Consensus 168 ~~~~~~~------------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~--~~~~~--- 230 (347)
.. .... ......|+.+|.+.+.+++.++.+. |++++.+.||.+.++........ .....
T Consensus 150 ~~-vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 225 (346)
T 4egb_A 150 DE-VYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEG 225 (346)
T ss_dssp GG-GGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTT
T ss_pred hH-HhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcC
Confidence 62 2111 1123689999999999999999885 79999999999988753211100 00000
Q ss_pred --hhh--------ccCCHHHHHHHHhhhhhhcc
Q 019009 231 --FNI--------ICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 231 --~~~--------~~~~pe~~a~~~~~~~~~~~ 253 (347)
... .....+++|+.++..+..+.
T Consensus 226 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 258 (346)
T 4egb_A 226 KKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR 258 (346)
T ss_dssp CCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred CCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence 000 01247899999988877654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=160.92 Aligned_cols=190 Identities=14% Similarity=0.042 Sum_probs=108.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+||||||||+||++++++|+++|++|++++|+.+. . + ++.+|++|.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~--------------------~--~~~~Dl~d~~ 50 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------P--------------------K--FEQVNLLDSN 50 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------C--------------------C--eEEecCCCHH
Confidence 5899999999999999999999999999999986542 0 1 4678999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++.. ++|+||||||.... ..+.++++..+++|+.++..+++++.+. +++||++||.. .
T Consensus 51 ~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~-v 113 (315)
T 2ydy_A 51 AVHHIIHDF-----QPHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDY-V 113 (315)
T ss_dssp -CHHHHHHH-----CCSEEEECC------------------------CHHHHHHHHHHHHH------TCEEEEEEEGG-G
T ss_pred HHHHHHHhh-----CCCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHH-H
Confidence 988887754 69999999997531 2345678899999999999999999763 24899999863 2
Q ss_pred CCC----------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccC---cccccCcccc---hhhh-----
Q 019009 172 GSS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT---DLLLSGSTIQ---NKQM----- 230 (347)
Q Consensus 172 ~~~----------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T---~~~~~~~~~~---~~~~----- 230 (347)
..+ ......|+.+|++.+.+++.++.++ ..||++.|. |+..+ ++........ ....
T Consensus 114 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (315)
T 2ydy_A 114 FDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHW 190 (315)
T ss_dssp SCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECS
T ss_pred cCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccC
Confidence 221 2345689999999999999876443 235555555 54444 1111100000 0000
Q ss_pred hhhccCCHHHHHHHHhhhhhhc
Q 019009 231 FNIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 231 ~~~~~~~pe~~a~~~~~~~~~~ 252 (347)
.......++++|+.++..+..+
T Consensus 191 ~~~~~i~v~Dva~a~~~~~~~~ 212 (315)
T 2ydy_A 191 QQRFPTHVKDVATVCRQLAEKR 212 (315)
T ss_dssp SBBCCEEHHHHHHHHHHHHHHH
T ss_pred ceECcEEHHHHHHHHHHHHHhh
Confidence 0011135899999988776543
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-19 Score=156.93 Aligned_cols=185 Identities=15% Similarity=0.083 Sum_probs=133.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|+++||||+|+||++++++|+++|+ +|++++|++++ ...++.++.+|++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------------------------~~~~~~~~~~D~~ 56 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------------------------EHPRLDNPVGPLA 56 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------------------------CCTTEECCBSCHH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------------------------cCCCceEEecccc
Confidence 357999999999999999999999998 99999998754 0124677889998
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.+++.+++ +|+||||||.... +.++++..+++|+.++..+++++.+. +.++||++||.
T Consensus 57 ~~~~~~~~~---------~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~ 115 (215)
T 2a35_A 57 ELLPQLDGS---------IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM-----GARHYLVVSAL 115 (215)
T ss_dssp HHGGGCCSC---------CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCT
T ss_pred CHHHHHHhh---------hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHHc-----CCCEEEEECCc
Confidence 887665543 8999999996421 13457788999999999999887542 35689999987
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeE-EEEeeCCcccCcccccCc-ccchhhhh-----hhccCCHHHH
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG-VHTASPGMVLTDLLLSGS-TIQNKQMF-----NIICELPETV 241 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~-v~~i~PG~v~T~~~~~~~-~~~~~~~~-----~~~~~~pe~~ 241 (347)
. ... +....|+.+|++++.+.+. .|++ ++.|.||++.++...... ........ ......++++
T Consensus 116 ~-~~~--~~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 185 (215)
T 2a35_A 116 G-ADA--KSSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDL 185 (215)
T ss_dssp T-CCT--TCSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHH
T ss_pred c-cCC--CCccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHH
Confidence 3 322 2346899999999998764 3798 999999999987532100 00000000 0111356788
Q ss_pred HHHHhhhhhhcc
Q 019009 242 ARTLVPRIRVVK 253 (347)
Q Consensus 242 a~~~~~~~~~~~ 253 (347)
|+.++..+..+.
T Consensus 186 a~~~~~~~~~~~ 197 (215)
T 2a35_A 186 ARALWRLALEEG 197 (215)
T ss_dssp HHHHHHHHTCCC
T ss_pred HHHHHHHHhcCC
Confidence 888887776553
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=162.74 Aligned_cols=195 Identities=19% Similarity=0.142 Sum_probs=134.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.|+++|||||+|+||++++++|+++|++|++++|+.....+. +. .-.++.++.+|++|.
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~------------------~~~~~~~~~~Dl~d~ 78 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LK------------------DHPNLTFVEGSIADH 78 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SC------------------CCTTEEEEECCTTCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hh------------------hcCCceEEEEeCCCH
Confidence 468999999999999999999999999999999975431110 00 003577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++. +++|+||||||.... . +.++++ +++|+.++..+++++.+. +.++||++||..
T Consensus 79 ~~~~~~~~~-----~~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~- 139 (333)
T 2q1w_A 79 ALVNQLIGD-----LQPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKKN-----NVGRFVYFQTAL- 139 (333)
T ss_dssp HHHHHHHHH-----HCCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGG-
T ss_pred HHHHHHHhc-----cCCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHHh-----CCCEEEEECcHH-
Confidence 999888765 269999999997542 1 234444 999999999999998762 357999999863
Q ss_pred CCC----C---------CCCcchhhhHHHHHHHHHHH-HHhHhcCCCeEEEEeeCCcccCcccccCc-ccc------hhh
Q 019009 171 GGS----S---------TPLTAVYGSTKCGLRQLQAS-LFKESKRSKVGVHTASPGMVLTDLLLSGS-TIQ------NKQ 229 (347)
Q Consensus 171 ~~~----~---------~~~~~~Y~asKaal~~~~~~-La~el~~~gI~v~~i~PG~v~T~~~~~~~-~~~------~~~ 229 (347)
... . .|....|+.+|++.+.+++. ++ .+..|.|+.+..+...... ... ...
T Consensus 140 ~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~ 211 (333)
T 2q1w_A 140 CYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKK 211 (333)
T ss_dssp GGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCC
T ss_pred HhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCe
Confidence 221 1 23227899999999999987 55 4556667666554310000 000 000
Q ss_pred hh----hhccCCHHHHHHHHhhhhhhcc
Q 019009 230 MF----NIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 230 ~~----~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
.. ......++++|+.++..+..+.
T Consensus 212 ~~~~~~~~~~i~v~Dva~ai~~~~~~~~ 239 (333)
T 2q1w_A 212 CFVTKARRDFVFVKDLARATVRAVDGVG 239 (333)
T ss_dssp CEEEECEECEEEHHHHHHHHHHHHTTCC
T ss_pred eeCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence 00 0112368999999988776554
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-19 Score=166.54 Aligned_cols=174 Identities=20% Similarity=0.132 Sum_probs=121.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH--CCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLL--SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~--~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+|+||||||+|+||++++++|++ +|++|++++|+........... + .........+.++.++.+|++
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~Dl~ 78 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRP-S---------SLGHFKNLIGFKGEVIAADIN 78 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------C-C---------CCCCGGGGTTCCSEEEECCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccch-h---------hhhhhhhccccCceEEECCCC
Confidence 358999999999999999999999 9999999999765211100000 0 000001112346788999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++ ...++|+||||||... . +.++++..+++|+.++..+++++.. . +++||++||.
T Consensus 79 d~~~~~~~------~~~~~D~vih~A~~~~----~---~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~SS~ 139 (362)
T 3sxp_A 79 NPLDLRRL------EKLHFDYLFHQAAVSD----T---TMLNQELVMKTNYQAFLNLLEIARS----K--KAKVIYASSA 139 (362)
T ss_dssp CHHHHHHH------TTSCCSEEEECCCCCG----G---GCCCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEG
T ss_pred CHHHHHHh------hccCCCEEEECCccCC----c---cccCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEeCcH
Confidence 99998886 2358999999999642 1 3345788999999999999998843 2 3459999985
Q ss_pred CC-CCC--------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 169 GS-GGS--------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 169 ~~-~~~--------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.. +.. +......|+.||.+.+.+++.++.+ +++..|.|+.+..|.
T Consensus 140 ~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~ 193 (362)
T 3sxp_A 140 GVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPR 193 (362)
T ss_dssp GGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTT
T ss_pred HHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcC
Confidence 21 111 1112356999999999999988876 566667776666553
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=163.16 Aligned_cols=169 Identities=13% Similarity=0.019 Sum_probs=129.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+++||||||+|+||++++++|+++| ++|++++|+.+...+ .+. ...++.++.+|++|
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~------------------~~~~v~~~~~Dl~d 89 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP------------------DHPAVRFSETSITD 89 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC------------------CCTTEEEECSCTTC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc------------------CCCceEEEECCCCC
Confidence 46899999999999999999999999 999999998653210 000 02467889999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++ ++|+|||+||.... ..+.++.+..+++|+.++..+++++.. .++.++||++||..
T Consensus 90 ~~~l~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~ 153 (377)
T 2q1s_A 90 DALLASLQD-------EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGC 153 (377)
T ss_dssp HHHHHHCCS-------CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC-
T ss_pred HHHHHHHhh-------CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHH
Confidence 988777653 79999999996431 123456788999999999999988732 21246899999863
Q ss_pred CC-----------CC----CC-CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 170 SG-----------GS----ST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 170 ~~-----------~~----~~-~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
.- .. +. .....|+.+|.+.+.+++.++.++ |++++.+.||.+.++..
T Consensus 154 vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 154 SIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE 216 (377)
T ss_dssp -------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred HcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 10 11 11 345689999999999999998875 79999999999988754
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=161.10 Aligned_cols=168 Identities=13% Similarity=0.157 Sum_probs=128.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHC---C---CeEEEEeCChhHH-HHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 14 RWFSVVSTRGLGKALAREFLLS---G---DRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~---G---~~Vil~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
++|||||+|+||++++++|+++ | ++|++++|+.... .+..+++. ...++.++.+|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~D 63 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD------------------ADPRLRFVHGD 63 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT------------------TCTTEEEEECC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc------------------cCCCeEEEEcC
Confidence 6999999999999999999997 8 9999999864210 00001110 12467889999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++|.+++++++ .++|+||||||.... +.+.++++..+++|+.++..+++++.+. ..++||++|
T Consensus 64 l~d~~~~~~~~-------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~S 126 (337)
T 1r6d_A 64 IRDAGLLAREL-------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVS 126 (337)
T ss_dssp TTCHHHHHHHT-------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEE
T ss_pred CCCHHHHHHHh-------cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEec
Confidence 99998888776 479999999996431 1234556789999999999999998775 246899999
Q ss_pred CCCC-CC---------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 167 GAGS-GG---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 167 S~~~-~~---------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
|... +. .+......|+.||.+.+.+++.++.++ |++++.+.||.+.++..
T Consensus 127 S~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~ 186 (337)
T 1r6d_A 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ 186 (337)
T ss_dssp EGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred chHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCC
Confidence 8521 11 123345789999999999999999885 79999999999988764
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.8e-18 Score=160.75 Aligned_cols=162 Identities=10% Similarity=0.018 Sum_probs=127.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC-C
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-E 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls-~ 89 (347)
+|+||||||+|+||.+++++|+++ |++|++++|+.++.+... ...++.++.+|++ |
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------------------~~~~v~~~~~Dl~~d 81 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----------------------KHERMHFFEGDITIN 81 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----------------------GSTTEEEEECCTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----------------------cCCCeEEEeCccCCC
Confidence 489999999999999999999998 999999999876543211 1246889999999 9
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++ ++|+|||+||...+ ....++.+..+++|+.++..+++++... + +++|++||..
T Consensus 82 ~~~~~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~-~~~v~~SS~~ 143 (372)
T 3slg_A 82 KEWVEYHVK-------KCDVILPLVAIATP-----ATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSE 143 (372)
T ss_dssp HHHHHHHHH-------HCSEEEECBCCCCH-----HHHHHCHHHHHHHHTTTTHHHHHHHHHH-----T-CEEEEECCGG
T ss_pred HHHHHHHhc-------cCCEEEEcCccccH-----HHHhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEeCcHH
Confidence 999888876 58999999997531 1123456688899999999988887654 3 6899999852
Q ss_pred CCCCCC------------------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 SGGSST------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~~~~~~------------------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
..... .....|+.+|.+.+.+++.++.+ |++++.+.|+.+..+.
T Consensus 144 -vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~ 205 (372)
T 3slg_A 144 -VYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPG 205 (372)
T ss_dssp -GGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSS
T ss_pred -HhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCC
Confidence 11110 12337999999999999988876 7999999999998775
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=159.91 Aligned_cols=162 Identities=10% Similarity=-0.006 Sum_probs=127.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|++|||||+|+||.+++++|+++ |++|++++|+..+.+ +. .++.++.+|++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~--------------------~~~~~~~~D~~d 56 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV--------------------NSGPFEVVNALD 56 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH--------------------HSSCEEECCTTC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc--------------------CCCceEEecCCC
Confidence 478999999999999999999999 899999999876421 11 135678999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++.. ++|+|||+||... . ...++.+..+++|+.++..+++++.+ . +.+++|++||..
T Consensus 57 ~~~~~~~~~~~-----~~d~vih~a~~~~---~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~ 120 (312)
T 2yy7_A 57 FNQIEHLVEVH-----KITDIYLMAALLS---A---TAEKNPAFAWDLNMNSLFHVLNLAKA----K-KIKKIFWPSSIA 120 (312)
T ss_dssp HHHHHHHHHHT-----TCCEEEECCCCCH---H---HHHHCHHHHHHHHHHHHHHHHHHHHT----T-SCSEEECCEEGG
T ss_pred HHHHHHHHhhc-----CCCEEEECCccCC---C---chhhChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEeccHH
Confidence 99998887643 6999999998642 1 12356788999999999999988754 2 346899999862
Q ss_pred CCCCC------------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 SGGSS------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~~~~~------------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.... ......|+.+|.+.+.+++.++.++ |++++.+.||.+..+.
T Consensus 121 -~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~ 177 (312)
T 2yy7_A 121 -VFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWS 177 (312)
T ss_dssp -GCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSS
T ss_pred -HhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCC
Confidence 2211 1224689999999999999998875 7999999999998753
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-19 Score=166.86 Aligned_cols=171 Identities=13% Similarity=0.112 Sum_probs=122.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH--HHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT--VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|+||||||+|+||++++++|+++|++|+++.|+.++.++. ..++. ...++.++.+|++|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~d 70 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ------------------ELGDLKIFRADLTD 70 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG------------------GGSCEEEEECCTTT
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC------------------CCCcEEEEecCCCC
Confidence 68999999999999999999999999999999987643211 11121 11357788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++ ++|+|||+||... .. ..+..++.+++|+.|++++++++.+.. +.++||++||..
T Consensus 71 ~~~~~~~~~-------~~D~Vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~----~v~r~V~~SS~~ 133 (338)
T 2rh8_A 71 ELSFEAPIA-------GCDFVFHVATPVH----FA--SEDPENDMIKPAIQGVVNVMKACTRAK----SVKRVILTSSAA 133 (338)
T ss_dssp SSSSHHHHT-------TCSEEEEESSCCC----C-----------CHHHHHHHHHHHHHHHHCT----TCCEEEEECCHH
T ss_pred hHHHHHHHc-------CCCEEEEeCCccC----CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC----CcCEEEEEecHH
Confidence 988877764 5899999998532 11 112234589999999999999987642 246899999863
Q ss_pred CC----CCC----C------------C---CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccc
Q 019009 170 SG----GSS----T------------P---LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 220 (347)
Q Consensus 170 ~~----~~~----~------------~---~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~ 220 (347)
+. ..+ . | ....|+.||.+.+.+++.++.+ .|+++++|.||.|.+|...
T Consensus 134 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~ 204 (338)
T 2rh8_A 134 AVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLT 204 (338)
T ss_dssp HHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSS
T ss_pred HeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCC
Confidence 10 000 0 0 1115999999999988887765 3799999999999998643
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-18 Score=158.80 Aligned_cols=163 Identities=10% Similarity=0.004 Sum_probs=124.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH-
Q 019009 13 CRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP- 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~- 90 (347)
++||||||+|+||++++++|+++ |++|++++|+.++.+... ...++.++.+|++|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------------------~~~~~~~~~~D~~~~~ 58 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------------------NHPHFHFVEGDISIHS 58 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------------------TCTTEEEEECCTTTCS
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----------------------cCCCeEEEeccccCcH
Confidence 47999999999999999999998 899999999876542210 123578899999984
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+.++++++ ++|+|||+||...+ . ...++.+..+++|+.++..+++++.+ . + +++|++||..
T Consensus 59 ~~~~~~~~-------~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~v~~SS~~- 119 (345)
T 2bll_A 59 EWIEYHVK-------KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPSTSE- 119 (345)
T ss_dssp HHHHHHHH-------HCSEEEECBCCCCH-H----HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECCGG-
T ss_pred HHHHhhcc-------CCCEEEEcccccCc-c----chhcCHHHHHHHHHHHHHHHHHHHHH----h-C-CeEEEEecHH-
Confidence 55666654 47999999997431 1 11345678999999999998888754 2 3 7899999852
Q ss_pred CCCCC------------------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 171 GGSST------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 171 ~~~~~------------------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
..... .....|+.+|.+.+.+++.++.+. |++++.+.||.+.++..
T Consensus 120 v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 183 (345)
T 2bll_A 120 VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL 183 (345)
T ss_dssp GGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSC
T ss_pred HcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCc
Confidence 21110 112379999999999999998875 79999999999987753
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=171.32 Aligned_cols=175 Identities=17% Similarity=0.152 Sum_probs=129.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+||||||+|+||++++++|+++|++|++++|+.....+..+++... ...++.++.+|++|.
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~v~~v~~Dl~d~ 73 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL----------------TKHHIPFYEVDLCDR 73 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH----------------HTSCCCEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc----------------cCCceEEEEcCCCCH
Confidence 3589999999999999999999999999999999765433333333321 124577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++.. ++|+||||||.... .. ..+..+..+++|+.++..+++++... +.++||++||...
T Consensus 74 ~~l~~~~~~~-----~~D~Vih~A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~~iV~~SS~~v 138 (699)
T 1z45_A 74 KGLEKVFKEY-----KIDSVIHFAGLKAV-GE----STQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATV 138 (699)
T ss_dssp HHHHHHHHHS-----CCCEEEECCSCCCH-HH----HHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGG
T ss_pred HHHHHHHHhC-----CCCEEEECCcccCc-Cc----cccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECcHHH
Confidence 9998887642 79999999997431 11 12334568999999999988766432 3578999998632
Q ss_pred -CCC-------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 171 -GGS-------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 171 -~~~-------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
+.. +......|+.||++++.+++.++.+. ..|+++..+.|+.+..+
T Consensus 139 yg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~ 198 (699)
T 1z45_A 139 YGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA 198 (699)
T ss_dssp GCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred hCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence 100 11134689999999999999998875 35899999999877554
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=162.50 Aligned_cols=164 Identities=12% Similarity=0.076 Sum_probs=124.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+++||||||+|+||++++++|+++| ++|++++|+..... .+.+ . .+. +.+|++|.
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~-------------------~--~~~-~~~d~~~~ 101 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL-------------------V--DLN-IADYMDKE 101 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT-------------------T--TSC-CSEEEEHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc-------------------c--Cce-EeeecCcH
Confidence 4789999999999999999999999 89999999865421 0000 1 122 67899998
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+.++++++. ..++++|+|||+||.... +.++++..+++|+.++..+++++.+. +. +||++||..
T Consensus 102 ~~~~~~~~~--~~~~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~-r~V~~SS~~- 165 (357)
T 2x6t_A 102 DFLIQIMAG--EEFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAA- 165 (357)
T ss_dssp HHHHHHHTT--CCCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGG-
T ss_pred HHHHHHHhh--cccCCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcchH-
Confidence 888877653 235689999999997541 22346789999999999999999773 24 799999862
Q ss_pred CCCCCC-----------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 GGSSTP-----------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 ~~~~~~-----------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.....+ ....|+.+|.+.+.+++.++.+ .|++++.|.||.+.++.
T Consensus 166 v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~ 221 (357)
T 2x6t_A 166 TYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPR 221 (357)
T ss_dssp GGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSS
T ss_pred HhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCC
Confidence 221111 2468999999999999999877 48999999999998775
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-17 Score=150.57 Aligned_cols=190 Identities=11% Similarity=0.031 Sum_probs=136.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++||||||+|+||++++++|+++|++|++++|++...+ + .++.++.+|++ .+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~---------------------~~~~~~~~Dl~-~~ 54 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I---------------------NDYEYRVSDYT-LE 54 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------------------CCEEEECCCC-HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C---------------------CceEEEEcccc-HH
Confidence 479999999999999999999999999999999844321 1 14678999999 88
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ ++|+|||+||.... . +.+..+++|+.++..+++++.. . +.+++|++||.. .
T Consensus 55 ~~~~~~~-------~~d~Vih~a~~~~~-~--------~~~~~~~~n~~~~~~ll~a~~~----~-~~~r~v~~SS~~-v 112 (311)
T 3m2p_A 55 DLINQLN-------DVDAVVHLAATRGS-Q--------GKISEFHDNEILTQNLYDACYE----N-NISNIVYASTIS-A 112 (311)
T ss_dssp HHHHHTT-------TCSEEEECCCCCCS-S--------SCGGGTHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGG-G
T ss_pred HHHHhhc-------CCCEEEEccccCCC-C--------ChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEccHH-H
Confidence 8887764 79999999997542 1 3356788999999888888754 2 346899999852 2
Q ss_pred CC-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCc--ccchhhh-----h--
Q 019009 172 GS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS--TIQNKQM-----F-- 231 (347)
Q Consensus 172 ~~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~--~~~~~~~-----~-- 231 (347)
.. +......|+.+|.+.+.+++.++.+ .|++++.+.||.+.++...... ....... .
T Consensus 113 yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 189 (311)
T 3m2p_A 113 YSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTL 189 (311)
T ss_dssp CCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEE
T ss_pred hCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEE
Confidence 11 1112468999999999999998886 4899999999999876533110 0000000 0
Q ss_pred ------hhccCCHHHHHHHHhhhhhhcc
Q 019009 232 ------NIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 232 ------~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
.......+++|+.++..+..+.
T Consensus 190 ~g~~~~~~~~v~v~Dva~a~~~~~~~~~ 217 (311)
T 3m2p_A 190 HANSVAKREFLYAKDAAKSVIYALKQEK 217 (311)
T ss_dssp SSBCCCCEEEEEHHHHHHHHHHHTTCTT
T ss_pred ecCCCeEEceEEHHHHHHHHHHHHhcCC
Confidence 0011246899999988877654
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-18 Score=153.63 Aligned_cols=183 Identities=14% Similarity=0.043 Sum_probs=127.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++||||+|+||++++++|+ +|++|++++|+++. . .. +.+|++|.+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~---------------------------~-~~---~~~Dl~~~~~~ 49 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI---------------------------Q-GG---YKLDLTDFPRL 49 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC---------------------------T-TC---EECCTTSHHHH
T ss_pred EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC---------------------------C-CC---ceeccCCHHHH
Confidence 69999999999999999999 58999999998631 0 01 78999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
.++++.+ ++|+||||||.... +.+.++++..+++|+.++..+++++.+ . +++||++||. +...
T Consensus 50 ~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~-~~~~ 112 (273)
T 2ggs_A 50 EDFIIKK-----RPDVIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTD-YVFD 112 (273)
T ss_dssp HHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEG-GGSC
T ss_pred HHHHHhc-----CCCEEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecc-eeEc
Confidence 9988765 69999999997431 223467889999999999999999864 2 3589999986 3322
Q ss_pred CCC----------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc--chhhh--h--hhccCC
Q 019009 174 STP----------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQM--F--NIICEL 237 (347)
Q Consensus 174 ~~~----------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~--~~~~~--~--~~~~~~ 237 (347)
+.+ ....|+.+|++++.+++. +.-..||++.|. | .+++....... ..... . ......
T Consensus 113 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (273)
T 2ggs_A 113 GEKGNYKEEDIPNPINYYGLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFAFKGYYSPIS 185 (273)
T ss_dssp SSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEEESCEECCCB
T ss_pred CCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEeecCCCCceE
Confidence 221 246899999999999877 222345555555 3 23321110000 00000 0 112246
Q ss_pred HHHHHHHHhhhhhhc
Q 019009 238 PETVARTLVPRIRVV 252 (347)
Q Consensus 238 pe~~a~~~~~~~~~~ 252 (347)
++++|+.++..+..+
T Consensus 186 ~~dva~~i~~~~~~~ 200 (273)
T 2ggs_A 186 ARKLASAILELLELR 200 (273)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcC
Confidence 899999998877654
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.9e-17 Score=150.88 Aligned_cols=155 Identities=14% Similarity=0.109 Sum_probs=120.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++|||||+|+||++++++|+++ |++|++++|+..+. ..+.++.+|++|.+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------------------~~~~~~~~D~~d~~ 52 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------------------GGIKFITLDVSNRD 52 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------------------TTCCEEECCTTCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------------------cCceEEEecCCCHH
Confidence 4899999999999999999998 89999999875431 12457899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++. .++|+|||+||... . ...++.+..+++|+.++..+++++.+. +.+++|++||.. .
T Consensus 53 ~~~~~~~~-----~~~d~vih~a~~~~---~---~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~-~ 115 (317)
T 3ajr_A 53 EIDRAVEK-----YSIDAIFHLAGILS---A---KGEKDPALAYKVNMNGTYNILEAAKQH-----RVEKVVIPSTIG-V 115 (317)
T ss_dssp HHHHHHHH-----TTCCEEEECCCCCH---H---HHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGG-G
T ss_pred HHHHHHhh-----cCCcEEEECCcccC---C---ccccChHHHhhhhhHHHHHHHHHHHHc-----CCCEEEEecCHH-H
Confidence 99888764 27999999998642 1 123557889999999999999987642 356899999863 2
Q ss_pred CCCC------------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccC
Q 019009 172 GSST------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216 (347)
Q Consensus 172 ~~~~------------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T 216 (347)
.... .....|+.+|.+.+.+++.++.++ |++++.+.|+.+-.
T Consensus 116 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g 169 (317)
T 3ajr_A 116 FGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIIS 169 (317)
T ss_dssp CCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEC
T ss_pred hCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEec
Confidence 2111 135689999999999999988764 79999998665543
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-17 Score=149.45 Aligned_cols=187 Identities=15% Similarity=0.067 Sum_probs=128.7
Q ss_pred CCCCCcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeE
Q 019009 3 SDNDEHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG 82 (347)
Q Consensus 3 ~~~~~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (347)
+|....-..-++||||||+|+||++++++|+++|++|++++|+
T Consensus 3 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------------------- 45 (292)
T 1vl0_A 3 SDKIHHHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------------------- 45 (292)
T ss_dssp ---------CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------------------------
T ss_pred ccccccccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------------------------
Confidence 3444444445899999999999999999999999999999984
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEE
Q 019009 83 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 162 (347)
Q Consensus 83 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~I 162 (347)
.+|++|.+++.++++.+ ++|+||||||.... +.+.++++..+++|+.++..+++++.+. +. +|
T Consensus 46 -~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~-~i 108 (292)
T 1vl0_A 46 -DLDITNVLAVNKFFNEK-----KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GA-EI 108 (292)
T ss_dssp -TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TC-EE
T ss_pred -cCCCCCHHHHHHHHHhc-----CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eE
Confidence 25999999998887754 79999999996431 2234678899999999999999998763 23 89
Q ss_pred EEEcCCCCCCCCC-----------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh-
Q 019009 163 FNMDGAGSGGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM- 230 (347)
Q Consensus 163 v~vsS~~~~~~~~-----------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~- 230 (347)
|++||. +...+. .....|+.+|.+.+.+++.++. .+..|.|+.+.++ ............
T Consensus 109 v~~SS~-~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~~~~~~~~ 179 (292)
T 1vl0_A 109 VQISTD-YVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVKTMINLGK 179 (292)
T ss_dssp EEEEEG-GGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHHHHHHHHH
T ss_pred EEechH-HeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHHHHHHHHh
Confidence 999986 222111 1346899999999999987754 3566777777644 111000000000
Q ss_pred ----h------hhccCCHHHHHHHHhhhhhhc
Q 019009 231 ----F------NIICELPETVARTLVPRIRVV 252 (347)
Q Consensus 231 ----~------~~~~~~pe~~a~~~~~~~~~~ 252 (347)
. ......++++|+.++..+..+
T Consensus 180 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 211 (292)
T 1vl0_A 180 THDELKVVHDQVGTPTSTVDLARVVLKVIDEK 211 (292)
T ss_dssp HCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred cCCcEEeecCeeeCCccHHHHHHHHHHHHhcC
Confidence 0 011125899999998777654
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-17 Score=155.22 Aligned_cols=165 Identities=18% Similarity=0.156 Sum_probs=121.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++||||||+|+||++++++|+++|++|++++|+.....+..+++. ...++.++.+|+++.
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~D~~~~ 87 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI------------------GHENFELINHDVVEP 87 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT------------------TCTTEEEEECCTTSC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc------------------cCCceEEEeCccCCh
Confidence 45899999999999999999999999999999997542111111100 123578889999875
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
. +.++|+|||+||.... ... . ++.+..+++|+.++..+++++.+. +.++|++||...
T Consensus 88 ~------------~~~~d~vih~A~~~~~-~~~-~---~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v 144 (343)
T 2b69_A 88 L------------YIEVDQIYHLASPASP-PNY-M---YNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEV 144 (343)
T ss_dssp C------------CCCCSEEEECCSCCSH-HHH-T---TCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGG
T ss_pred h------------hcCCCEEEECccccCc-hhh-h---hCHHHHHHHHHHHHHHHHHHHHHh------CCcEEEECcHHH
Confidence 2 4579999999997431 111 1 234678999999999999988653 248999998621
Q ss_pred -CC--------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 171 -GG--------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 171 -~~--------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
+. .+......|+.+|.+.+.+++.++.+. |++++.+.||.+.++..
T Consensus 145 ~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 205 (343)
T 2b69_A 145 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM 205 (343)
T ss_dssp GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred hCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCC
Confidence 10 122234679999999999999998875 79999999999988753
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.2e-17 Score=159.86 Aligned_cols=183 Identities=19% Similarity=0.203 Sum_probs=126.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC---CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLS---GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~---G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
...+|+||||||+|+||++++++|+++ |++|++++|+.+..+ ..+++.+......... ...+......++.++.+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~-~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPEL-LRHFKELAADRLEVVAG 147 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHH-HHHHHHHHTTTEEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhh-hhhhhhhccCceEEEEe
Confidence 345799999999999999999999999 999999999876542 2333322211000000 00000001257889999
Q ss_pred CCC------CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCC
Q 019009 86 DVC------EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 159 (347)
Q Consensus 86 Dls------~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~ 159 (347)
|++ |.++++++++ ++|+||||||.... +.++..+++|+.++..+++++.. . +.
T Consensus 148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~----~-~~ 206 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALT----T-KL 206 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTS----S-SC
T ss_pred ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHh----C-CC
Confidence 999 5556666654 58999999997541 22356789999999999887743 2 34
Q ss_pred cEEEEEcCCCCCCCCCC---------------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 160 GHIFNMDGAGSGGSSTP---------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 160 g~Iv~vsS~~~~~~~~~---------------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
+++|++||........+ ....|+.||.+.+.+++.++.+. |++++++.||.|..+
T Consensus 207 ~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 207 KPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD 282 (478)
T ss_dssp CCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred CeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence 58999998522111000 11349999999999999998874 799999999999765
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.6e-17 Score=148.52 Aligned_cols=154 Identities=14% Similarity=0.083 Sum_probs=120.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++++|||||+|+||++++++|+++|++|+++.|+. .+|++|.+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------------------~~D~~d~~ 45 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------------------ELNLLDSR 45 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------------------TCCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------------------cCCccCHH
Confidence 36899999999999999999999999999988741 26999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++.. ++|+|||+||.... .....++.+..+++|+.++..+++++.+. +.+++|++||...-
T Consensus 46 ~~~~~~~~~-----~~d~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~vy 111 (321)
T 1e6u_A 46 AVHDFFASE-----RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIY 111 (321)
T ss_dssp HHHHHHHHH-----CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGS
T ss_pred HHHHHHHhc-----CCCEEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccHHHc
Confidence 998887654 69999999986421 11223456788999999999999887652 34689999986221
Q ss_pred C---------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 172 G---------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 172 ~---------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
. ...|....|+.+|.+.+.+++.++.++ |++++.+.||.+..+..
T Consensus 112 g~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 171 (321)
T 1e6u_A 112 PKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD 171 (321)
T ss_dssp CTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred CCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence 1 111223589999999999999998875 79999999999987753
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.71 E-value=7e-17 Score=164.36 Aligned_cols=165 Identities=10% Similarity=0.018 Sum_probs=126.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+++||||||+|+||.+++++|+++ |++|++++|+.++.++.. ...++.++.+|++|
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----------------------~~~~v~~v~~Dl~d 371 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------------------NHPHFHFVEGDISI 371 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----------------------TCTTEEEEECCTTT
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----------------------cCCceEEEECCCCC
Confidence 5689999999999999999999998 899999999876532110 12357889999999
Q ss_pred HHH-HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 90 PAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 90 ~~~-v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
.++ ++++++ ++|+||||||...+ . ...++.+..+++|+.++..+++++.+ . + +++|++||.
T Consensus 372 ~~~~~~~~~~-------~~D~Vih~Aa~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~-~r~V~~SS~ 433 (660)
T 1z7e_A 372 HSEWIEYHVK-------KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPSTS 433 (660)
T ss_dssp CHHHHHHHHH-------HCSEEEECCCCCCT-H----HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECCG
T ss_pred cHHHHHHhhc-------CCCEEEECceecCc-c----ccccCHHHHHHhhhHHHHHHHHHHHH----h-C-CEEEEEecH
Confidence 765 555543 58999999997431 1 12345678999999999998888765 2 2 789999986
Q ss_pred CCCCCCC------------------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 169 GSGGSST------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 169 ~~~~~~~------------------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
. ..... .....|+.||.+.+.+++.++.+. |++++++.||.+.++..
T Consensus 434 ~-vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~ 498 (660)
T 1z7e_A 434 E-VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL 498 (660)
T ss_dssp G-GGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTS
T ss_pred H-HcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCc
Confidence 2 21110 122379999999999999998875 79999999999988753
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-17 Score=149.05 Aligned_cols=163 Identities=12% Similarity=0.069 Sum_probs=122.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++|||||+|+||++++++|+++| ++|++++|++.... ...+. .+. +.+|++|.+.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---------------------~~~-~~~d~~~~~~ 56 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---------------------DLN-IADYMDKEDF 56 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH---------------------TSC-CSEEEEHHHH
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC---------------------cce-eccccccHHH
Confidence 48999999999999999999999 89999999865421 11111 112 6789998888
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++.. .++++|+|||+||.... +.++.+..+++|+.++..+++++.+. +. ++|++||.. ..
T Consensus 57 ~~~~~~~~--~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~-v~ 120 (310)
T 1eq2_A 57 LIQIMAGE--EFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAA-TY 120 (310)
T ss_dssp HHHHHTTC--CCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGG-GG
T ss_pred HHHHHhcc--ccCCCcEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeHH-Hh
Confidence 77765411 02369999999997531 22346788999999999999988664 24 799999862 21
Q ss_pred CCC-----------CCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 173 SST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 173 ~~~-----------~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
... .....|+.+|.+.+.+++.++.+ .|++++.+.||.+.++..
T Consensus 121 g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~ 175 (310)
T 1eq2_A 121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE 175 (310)
T ss_dssp TTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCC
Confidence 111 12457999999999999998876 489999999999988753
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=144.08 Aligned_cols=180 Identities=11% Similarity=0.030 Sum_probs=128.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
|++|||||||+||++++++|+++ |++|++++|++++.+. +.. ..+.++.+|++|.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----l~~-------------------~~~~~~~~D~~d~ 57 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST----LAD-------------------QGVEVRHGDYNQP 57 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH----HHH-------------------TTCEEEECCTTCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH----Hhh-------------------cCCeEEEeccCCH
Confidence 57999999999999999999999 9999999998876432 211 2467889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ ++|++||+||... . + ++|+.++.++++++.. . +.++||++||.+
T Consensus 58 ~~l~~~~~-------~~d~vi~~a~~~~--------~-~------~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~- 109 (287)
T 2jl1_A 58 ESLQKAFA-------GVSKLLFISGPHY--------D-N------TLLIVQHANVVKAARD----A-GVKHIAYTGYAF- 109 (287)
T ss_dssp HHHHHHTT-------TCSEEEECCCCCS--------C-H------HHHHHHHHHHHHHHHH----T-TCSEEEEEEETT-
T ss_pred HHHHHHHh-------cCCEEEEcCCCCc--------C-c------hHHHHHHHHHHHHHHH----c-CCCEEEEECCCC-
Confidence 98887764 5899999998521 1 1 5788888887777643 3 346899999873
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-c-hhhh------hhhccCCHHHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-Q-NKQM------FNIICELPETVA 242 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-~-~~~~------~~~~~~~pe~~a 242 (347)
.. . ....|+.+|.+.+.+.+. .|++++.+.||++.++........ . .... .......++++|
T Consensus 110 ~~-~--~~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 179 (287)
T 2jl1_A 110 AE-E--SIIPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELA 179 (287)
T ss_dssp GG-G--CCSTHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHH
T ss_pred CC-C--CCCchHHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHH
Confidence 32 2 224799999999998752 589999999999877652111100 0 0000 001224688999
Q ss_pred HHHhhhhhhcc
Q 019009 243 RTLVPRIRVVK 253 (347)
Q Consensus 243 ~~~~~~~~~~~ 253 (347)
+.++..+..+.
T Consensus 180 ~~~~~~~~~~~ 190 (287)
T 2jl1_A 180 LAAATVLTEEG 190 (287)
T ss_dssp HHHHHHHTSSS
T ss_pred HHHHHHhcCCC
Confidence 99887776543
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=8.7e-17 Score=146.56 Aligned_cols=180 Identities=13% Similarity=0.036 Sum_probs=129.9
Q ss_pred CC-eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TC-RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k-~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+| ++|||||+|+||++++++|+++|++|++++|. .+|++|.
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------------------~~D~~d~ 45 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------------------LLDITNI 45 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------------------TSCTTCH
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------------------ccCCCCH
Confidence 45 89999999999999999999999999999981 3699999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.. ++|+|||+||.... ....++++..+++|+.++..+++++.+. +.++|++||..
T Consensus 46 ~~~~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~- 108 (287)
T 3sc6_A 46 SQVQQVVQEI-----RPHIIIHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDY- 108 (287)
T ss_dssp HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGG-
T ss_pred HHHHHHHHhc-----CCCEEEECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhh-
Confidence 9999888765 79999999997531 1112456889999999999999998654 24799999862
Q ss_pred CCC-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh-----h---
Q 019009 171 GGS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM-----F--- 231 (347)
Q Consensus 171 ~~~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~-----~--- 231 (347)
... +......|+.+|.+.+.+++.++. +++.+.|+.+..+............. .
T Consensus 109 vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 181 (287)
T 3sc6_A 109 VFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVV 181 (287)
T ss_dssp GSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEE
T ss_pred hcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEee
Confidence 221 112346899999999999987654 35788999987763211100000000 0
Q ss_pred ---hhccCCHHHHHHHHhhhhhhcc
Q 019009 232 ---NIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 232 ---~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
......++++|+.++..+..+.
T Consensus 182 ~~~~~~~i~v~Dva~~~~~~~~~~~ 206 (287)
T 3sc6_A 182 ADQIGSPTYVADLNVMINKLIHTSL 206 (287)
T ss_dssp CSCEECCEEHHHHHHHHHHHHTSCC
T ss_pred cCcccCceEHHHHHHHHHHHHhCCC
Confidence 0011248999999988887665
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.7e-16 Score=144.52 Aligned_cols=157 Identities=13% Similarity=-0.009 Sum_probs=117.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++||||||||+||++++++|+++|+ +... ....+..+.+|++|.
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~----------------------------~~~~~~~~~~D~~d~ 50 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPGE----------------------------DWVFVSSKDADLTDT 50 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC----------------------------EEEECCTTTCCTTSH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC------cccc----------------------------cccccCceecccCCH
Confidence 358999999999999999999999998 1100 112345568999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++.. ++|+|||+||.... . ..+.++.+..+++|+.++..+++++... +.+++|++||..
T Consensus 51 ~~~~~~~~~~-----~~d~Vih~A~~~~~-~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~v~~SS~~- 115 (319)
T 4b8w_A 51 AQTRALFEKV-----QPTHVIHLAAMVGG-L---FRNIKYNLDFWRKNVHMNDNVLHSAFEV-----GARKVVSCLSTC- 115 (319)
T ss_dssp HHHHHHHHHS-----CCSEEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGG-
T ss_pred HHHHHHHhhc-----CCCEEEECceeccc-c---cccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEEcchh-
Confidence 9999887652 69999999997431 1 1122345678999999999998887542 345899999862
Q ss_pred CC----------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 171 GG----------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 171 ~~----------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
.. ...|....|+.+|.+.+.+++.++++. |++++.+.|+.+..+..
T Consensus 116 vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~ 177 (319)
T 4b8w_A 116 IFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHD 177 (319)
T ss_dssp GSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred hcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCC
Confidence 21 111222369999999999999998875 79999999999987753
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=8.9e-16 Score=139.54 Aligned_cols=177 Identities=10% Similarity=0.013 Sum_probs=120.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++||||||+||++++++|+++ |++|++++|++++.+. +.. ..+.++.+|++|.+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~~-------------------~~~~~~~~D~~d~~ 57 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA----LAA-------------------QGITVRQADYGDEA 57 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH----HHH-------------------TTCEEEECCTTCHH
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh----hhc-------------------CCCeEEEcCCCCHH
Confidence 4899999999999999999998 9999999999876432 211 24678899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ ++|+|||+||... + .|+.++..+++++ ++. +.++||++||.+ .
T Consensus 58 ~~~~~~~-------~~d~vi~~a~~~~----------~-------~~~~~~~~l~~a~----~~~-~~~~~v~~Ss~~-~ 107 (286)
T 2zcu_A 58 ALTSALQ-------GVEKLLLISSSEV----------G-------QRAPQHRNVINAA----KAA-GVKFIAYTSLLH-A 107 (286)
T ss_dssp HHHHHTT-------TCSEEEECC-------------------------CHHHHHHHHH----HHH-TCCEEEEEEETT-T
T ss_pred HHHHHHh-------CCCEEEEeCCCCc----------h-------HHHHHHHHHHHHH----HHc-CCCEEEEECCCC-C
Confidence 8887764 6899999998521 0 2555555555554 333 356899999873 3
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc-hhh------hhhhccCCHHHHHHH
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ-NKQ------MFNIICELPETVART 244 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~-~~~------~~~~~~~~pe~~a~~ 244 (347)
. . ....|+.+|.+.+.+.+. .|++++.+.||++.+++........ ... ........++++|+.
T Consensus 108 ~-~--~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 177 (286)
T 2zcu_A 108 D-T--SPLGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAA 177 (286)
T ss_dssp T-T--CCSTTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHH
T ss_pred C-C--CcchhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHH
Confidence 2 2 224799999999998763 4799999999998776431100000 000 001122468999999
Q ss_pred Hhhhhhhcc
Q 019009 245 LVPRIRVVK 253 (347)
Q Consensus 245 ~~~~~~~~~ 253 (347)
++..+..+.
T Consensus 178 ~~~~~~~~~ 186 (286)
T 2zcu_A 178 AARVISEAG 186 (286)
T ss_dssp HHHHHHSSS
T ss_pred HHHHhcCCC
Confidence 988776654
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.7e-15 Score=137.84 Aligned_cols=183 Identities=11% Similarity=0.144 Sum_probs=121.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-------hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEe
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA 84 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (347)
+++++||||||+||++++++|+++|++|++++|++ ++.+. .+++.. ..+.++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~-------------------~~v~~v~ 61 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS-------------------LGVILLE 61 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH-------------------TTCEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh-------------------CCCEEEE
Confidence 57899999999999999999999999999999987 44432 233322 2467889
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 85 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 85 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
+|++|.+++.++++ ++|+||||||... +.+...++++ +++.+.-+++|
T Consensus 62 ~D~~d~~~l~~~~~-------~~d~vi~~a~~~~--------------------~~~~~~l~~a----a~~~g~v~~~v- 109 (307)
T 2gas_A 62 GDINDHETLVKAIK-------QVDIVICAAGRLL--------------------IEDQVKIIKA----IKEAGNVKKFF- 109 (307)
T ss_dssp CCTTCHHHHHHHHT-------TCSEEEECSSSSC--------------------GGGHHHHHHH----HHHHCCCSEEE-
T ss_pred eCCCCHHHHHHHHh-------CCCEEEECCcccc--------------------cccHHHHHHH----HHhcCCceEEe-
Confidence 99999998887765 6999999998631 2333444444 44331145676
Q ss_pred EcCCCCC----CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-----chhhh-----
Q 019009 165 MDGAGSG----GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNKQM----- 230 (347)
Q Consensus 165 vsS~~~~----~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-----~~~~~----- 230 (347)
.|+.+.. ....|....| .+|.+++.+.+. .|++++.|+||++.+++....... .....
T Consensus 110 ~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
T 2gas_A 110 PSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGD 181 (307)
T ss_dssp CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETT
T ss_pred ecccccCcccccCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecC
Confidence 3433211 1123335679 999999887752 378999999999988654221110 00000
Q ss_pred --hhhccCCHHHHHHHHhhhhhhccc
Q 019009 231 --FNIICELPETVARTLVPRIRVVKG 254 (347)
Q Consensus 231 --~~~~~~~pe~~a~~~~~~~~~~~~ 254 (347)
.......++++|+.++..+..++.
T Consensus 182 ~~~~~~~i~~~Dva~~~~~~l~~~~~ 207 (307)
T 2gas_A 182 GNVKGAYVTEADVGTFTIRAANDPNT 207 (307)
T ss_dssp SCSEEEEECHHHHHHHHHHHHTCGGG
T ss_pred CCcceEEeeHHHHHHHHHHHHcCccc
Confidence 011224689999999887766543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-15 Score=140.50 Aligned_cols=188 Identities=11% Similarity=-0.013 Sum_probs=126.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|+++||||||+||++++++|+++| ++|++++|++++... +.+.. ..+.++.+|++|.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~-------------------~~~~~~~~D~~d~ 63 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL-------------------QGAEVVQGDQDDQ 63 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH-------------------TTCEEEECCTTCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH-------------------CCCEEEEecCCCH
Confidence 5899999999999999999999999 999999999876421 22222 2467889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++.++++ ++|+||||+|.... .. .+.|+. .++.+++.+++. +.++||++|+.+.
T Consensus 64 ~~l~~~~~-------~~d~vi~~a~~~~~------~~-------~~~~~~----~~~~~~~aa~~~-gv~~iv~~S~~~~ 118 (299)
T 2wm3_A 64 VIMELALN-------GAYATFIVTNYWES------CS-------QEQEVK----QGKLLADLARRL-GLHYVVYSGLENI 118 (299)
T ss_dssp HHHHHHHT-------TCSEEEECCCHHHH------TC-------HHHHHH----HHHHHHHHHHHH-TCSEEEECCCCCH
T ss_pred HHHHHHHh-------cCCEEEEeCCCCcc------cc-------chHHHH----HHHHHHHHHHHc-CCCEEEEEcCccc
Confidence 99888764 58999999985320 01 223433 445555555554 3578999665421
Q ss_pred CC-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc--chh---h--h----hhhccCCH
Q 019009 171 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNK---Q--M----FNIICELP 238 (347)
Q Consensus 171 ~~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~--~~~---~--~----~~~~~~~p 238 (347)
.. ...+....|+.+|.+++.+.+. .|++++.|.||++.+++....... ... . . .......+
T Consensus 119 ~~~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 191 (299)
T 2wm3_A 119 KKLTAGRLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSV 191 (299)
T ss_dssp HHHTTTSCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECG
T ss_pred cccCCCcccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecH
Confidence 11 1111246799999999988764 379999999999988864321110 000 0 0 01112367
Q ss_pred HHHHHHHhhhhhhc
Q 019009 239 ETVARTLVPRIRVV 252 (347)
Q Consensus 239 e~~a~~~~~~~~~~ 252 (347)
+++|+.++..+..+
T Consensus 192 ~Dva~~~~~~l~~~ 205 (299)
T 2wm3_A 192 SDLGPVVLSLLKMP 205 (299)
T ss_dssp GGHHHHHHHHHHSH
T ss_pred HHHHHHHHHHHcCh
Confidence 88998888776654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6e-15 Score=138.24 Aligned_cols=189 Identities=13% Similarity=0.079 Sum_probs=129.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~----~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+++||||||||+||+++++.|+++|++|++++|++ ++.+ ..+++.. ..+.++.+|+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~-------------------~~v~~~~~Dl 69 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED-------------------KGAIIVYGLI 69 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH-------------------TTCEEEECCT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh-------------------CCcEEEEeec
Confidence 37899999999999999999999999999999987 2322 2223322 3578899999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.+++.+++++. ++|+|||+||. .|+.+...+++++... +.-.++|. |+
T Consensus 70 ~d~~~l~~~~~~~-----~~d~Vi~~a~~--------------------~n~~~~~~l~~aa~~~----g~v~~~v~-S~ 119 (346)
T 3i6i_A 70 NEQEAMEKILKEH-----EIDIVVSTVGG--------------------ESILDQIALVKAMKAV----GTIKRFLP-SE 119 (346)
T ss_dssp TCHHHHHHHHHHT-----TCCEEEECCCG--------------------GGGGGHHHHHHHHHHH----CCCSEEEC-SC
T ss_pred CCHHHHHHHHhhC-----CCCEEEECCch--------------------hhHHHHHHHHHHHHHc----CCceEEee-cc
Confidence 9999998887652 79999999985 1777887777776543 11345664 54
Q ss_pred CCCC---CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-----chhh--h-----hh
Q 019009 168 AGSG---GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNKQ--M-----FN 232 (347)
Q Consensus 168 ~~~~---~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-----~~~~--~-----~~ 232 (347)
.+.. ..+.+....|+.+|.+++.+.+. .|+.++.|.||++...+....... .... . ..
T Consensus 120 ~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 192 (346)
T 3i6i_A 120 FGHDVNRADPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVK 192 (346)
T ss_dssp CSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCC
T ss_pred cCCCCCccCcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCce
Confidence 4221 11224456899999998887764 479999999998877543221110 0000 0 01
Q ss_pred hccCCHHHHHHHHhhhhhhcccccc
Q 019009 233 IICELPETVARTLVPRIRVVKGSGK 257 (347)
Q Consensus 233 ~~~~~pe~~a~~~~~~~~~~~~~~~ 257 (347)
......+++|+.++..+..++..+.
T Consensus 193 ~~~i~~~Dva~~~~~~l~~~~~~~~ 217 (346)
T 3i6i_A 193 AYFVAGTDIGKFTMKTVDDVRTLNK 217 (346)
T ss_dssp EEEECHHHHHHHHHHHTTCGGGTTE
T ss_pred EEecCHHHHHHHHHHHHhCccccCe
Confidence 1224689999999988877654343
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=5.1e-16 Score=142.16 Aligned_cols=180 Identities=16% Similarity=0.046 Sum_probs=127.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
++|||||+|+||++++++|+ +|++|++++|+.. .+.+|++|.+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------------------~~~~D~~d~~~~ 46 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------------------EFCGDFSNPKGV 46 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------------------SSCCCTTCHHHH
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------------------cccccCCCHHHH
Confidence 69999999999999999999 8999999999651 246899999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
.++++.. ++|+|||+||.... . .+.++.+..+++|+.++..+++++.+ . +.++|++||.. ...
T Consensus 47 ~~~~~~~-----~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~~-vy~ 109 (299)
T 1n2s_A 47 AETVRKL-----RPDVIVNAAAHTAV-D----KAESEPELAQLLNATSVEAIAKAANE----T--GAWVVHYSTDY-VFP 109 (299)
T ss_dssp HHHHHHH-----CCSEEEECCCCCCH-H----HHTTCHHHHHHHHTHHHHHHHHHHTT----T--TCEEEEEEEGG-GSC
T ss_pred HHHHHhc-----CCCEEEECcccCCH-h----hhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEeccc-EEe
Confidence 8887754 69999999996431 1 11234677899999999999988743 2 34899999862 211
Q ss_pred C-----------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhh-----hh-----
Q 019009 174 S-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM-----FN----- 232 (347)
Q Consensus 174 ~-----------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~-----~~----- 232 (347)
+ ......|+.+|.+.+.+++.++. +++.+.||.+.++............. ..
T Consensus 110 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
T 1n2s_A 110 GTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQ 182 (299)
T ss_dssp CCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSC
T ss_pred CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCc
Confidence 1 11246899999999999887643 78899999998774321100000000 00
Q ss_pred -hccCCHHHHHHHHhhhhhhc
Q 019009 233 -IICELPETVARTLVPRIRVV 252 (347)
Q Consensus 233 -~~~~~pe~~a~~~~~~~~~~ 252 (347)
......+++|+.++..+..+
T Consensus 183 ~~~~i~v~Dva~~~~~~~~~~ 203 (299)
T 1n2s_A 183 YGAPTGAELLADCTAHAIRVA 203 (299)
T ss_dssp EECCEEHHHHHHHHHHHHHHH
T ss_pred ccCCeeHHHHHHHHHHHHHHh
Confidence 01123789999998777655
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.8e-16 Score=151.53 Aligned_cols=176 Identities=14% Similarity=0.084 Sum_probs=125.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH---HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES---VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~---l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
..+++||||||||+||.+++++|.+.|++|+++.|+..+ .+...+.++....... ......++.++.+|
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~--------~~~~~~~v~~v~~D 219 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEET--------VEMMLSNIEVIVGD 219 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHH--------HHHHSTTEEEEEEB
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhccccc--------chhccCceEEEecC
Confidence 346899999999999999999999999999999998773 2333333322100000 00023578999999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+++.+++. ...++|+||||||... ..+.++..+++|+.++..+++++.+ ...++|++|
T Consensus 220 l~d~~~l~--------~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~------~~~~~v~iS 277 (508)
T 4f6l_B 220 FECMDDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVS 277 (508)
T ss_dssp TTBCSSCC--------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT------TTCEEEEEE
T ss_pred CcccccCC--------CccCCCEEEECCceec--------CCCCHHHHhhhHHHHHHHHHHHHHh------CCCcEEEeC
Confidence 99987776 3458999999999742 1235677889999999999998865 246899999
Q ss_pred CCCCCCC-----------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 167 GAGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 167 S~~~~~~-----------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
|...+.. +......|+.+|.+.+.+.+.++. .|++++.+.||.|..+..
T Consensus 278 S~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~ 343 (508)
T 4f6l_B 278 TISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYN 343 (508)
T ss_dssp ESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSS
T ss_pred ChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCC
Confidence 8744110 011356899999999999988653 589999999999987643
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.1e-15 Score=136.45 Aligned_cols=184 Identities=13% Similarity=0.045 Sum_probs=120.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+||||||||+||++++++|+++ |++|++++|++++.+.. ....+.++.+|++|.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-----------------------~~~~v~~~~~D~~d~~~ 58 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-----------------------WRGKVSVRQLDYFNQES 58 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-----------------------GBTTBEEEECCTTCHHH
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-----------------------hhCCCEEEEcCCCCHHH
Confidence 5899999999999999999998 99999999998754221 12467889999999998
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++ ++|+||||||.... . ..|+.+ ++.+++.+++. +-++||++||.+ ..
T Consensus 59 l~~~~~-------~~d~vi~~a~~~~~--------~-------~~~~~~----~~~l~~aa~~~-gv~~iv~~Ss~~-~~ 110 (289)
T 3e48_A 59 MVEAFK-------GMDTVVFIPSIIHP--------S-------FKRIPE----VENLVYAAKQS-GVAHIIFIGYYA-DQ 110 (289)
T ss_dssp HHHHTT-------TCSEEEECCCCCCS--------H-------HHHHHH----HHHHHHHHHHT-TCCEEEEEEESC-CS
T ss_pred HHHHHh-------CCCEEEEeCCCCcc--------c-------hhhHHH----HHHHHHHHHHc-CCCEEEEEcccC-CC
Confidence 887764 78999999986431 0 114333 45556666665 357999999863 22
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh--h-----hhhccCCHHHHHHHH
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ--M-----FNIICELPETVARTL 245 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~--~-----~~~~~~~pe~~a~~~ 245 (347)
... .|..++... .+...+...|++++.+.||++.+++........... . .......++++|+.+
T Consensus 111 ~~~----~~~~~~~~~-----~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 181 (289)
T 3e48_A 111 HNN----PFHMSPYFG-----YASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGV 181 (289)
T ss_dssp TTC----CSTTHHHHH-----HHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHH
T ss_pred CCC----CCccchhHH-----HHHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHH
Confidence 222 233333211 222233345899999999999887542111000000 0 001124689999999
Q ss_pred hhhhhhcccccc
Q 019009 246 VPRIRVVKGSGK 257 (347)
Q Consensus 246 ~~~~~~~~~~~~ 257 (347)
+..+..+...+.
T Consensus 182 ~~~l~~~~~~g~ 193 (289)
T 3e48_A 182 IAIIKNPDTWGK 193 (289)
T ss_dssp HHHHHCGGGTTC
T ss_pred HHHHcCCCcCCc
Confidence 888776654443
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=7.8e-15 Score=138.13 Aligned_cols=151 Identities=11% Similarity=0.013 Sum_probs=110.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC-CCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD-VCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-ls~~ 90 (347)
+|+++||||||+||++++++|+++|++|++++|++++.. .+++.+ ...+.++.+| ++|.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~------------------~~~v~~v~~D~l~d~ 64 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA------------------IPNVTLFQGPLLNNV 64 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT------------------STTEEEEESCCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh------------------cCCcEEEECCccCCH
Confidence 478999999999999999999999999999999887642 122221 1257788999 9999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCC-CcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~g~Iv~vsS~~ 169 (347)
+++.++++ ++|++|||++... . +.|..+ +.+++.+++. + .++||++||..
T Consensus 65 ~~l~~~~~-------~~d~Vi~~a~~~~-------~---------~~~~~~-----~~l~~aa~~~-g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 65 PLMDTLFE-------GAHLAFINTTSQA-------G---------DEIAIG-----KDLADAAKRA-GTIQHYIYSSMPD 115 (352)
T ss_dssp HHHHHHHT-------TCSEEEECCCSTT-------S---------CHHHHH-----HHHHHHHHHH-SCCSEEEEEECCC
T ss_pred HHHHHHHh-------cCCEEEEcCCCCC-------c---------HHHHHH-----HHHHHHHHHc-CCccEEEEeCCcc
Confidence 99888764 5899999997521 0 123333 4444555443 3 46999999874
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
....+.+....|+.+|++.+.+++. .|++++.|.||++-++.
T Consensus 116 ~~~~~~~~~~~y~~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~ 157 (352)
T 1xgk_A 116 HSLYGPWPAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNNNF 157 (352)
T ss_dssp GGGTSSCCCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGGGC
T ss_pred ccccCCCCCccHHHHHHHHHHHHHH-------cCCCEEEEecceecCCc
Confidence 2233334456899999999998864 27999999999876544
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-14 Score=133.39 Aligned_cols=189 Identities=12% Similarity=0.089 Sum_probs=123.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-----hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-----~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
+++|+||||||+||++++++|+++|++|++++|+. ++.+. .+++. ...+.++.+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~-------------------~~~~~~~~~D 63 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK-------------------QLGAKLIEAS 63 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH-------------------TTTCEEECCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH-------------------hCCeEEEeCC
Confidence 47899999999999999999999999999999984 33221 12221 1357789999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++|.+++.++++ ++|+|||++|.... . .|+.+...+++++ ++.++-+++|. |
T Consensus 64 ~~d~~~l~~~~~-------~~d~vi~~a~~~~~-~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S 115 (313)
T 1qyd_A 64 LDDHQRLVDALK-------QVDVVISALAGGVL-S---------------HHILEQLKLVEAI----KEAGNIKRFLP-S 115 (313)
T ss_dssp SSCHHHHHHHHT-------TCSEEEECCCCSSS-S---------------TTTTTHHHHHHHH----HHSCCCSEEEC-S
T ss_pred CCCHHHHHHHHh-------CCCEEEECCccccc-h---------------hhHHHHHHHHHHH----HhcCCCceEEe-c
Confidence 999998888764 69999999997531 1 1555655555544 44421457774 4
Q ss_pred CCCCCCC-----CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcc------cchhhh-----
Q 019009 167 GAGSGGS-----STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST------IQNKQM----- 230 (347)
Q Consensus 167 S~~~~~~-----~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~------~~~~~~----- 230 (347)
+.+.... ..|....| .+|.+++.+.+. .|++++.+.||++.+++...... ......
T Consensus 116 ~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (313)
T 1qyd_A 116 EFGMDPDIMEHALQPGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGD 187 (313)
T ss_dssp CCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTT
T ss_pred CCcCCccccccCCCCCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCC
Confidence 4321111 12345678 999999887752 47889999999887654321111 000000
Q ss_pred --hhhccCCHHHHHHHHhhhhhhccccc
Q 019009 231 --FNIICELPETVARTLVPRIRVVKGSG 256 (347)
Q Consensus 231 --~~~~~~~pe~~a~~~~~~~~~~~~~~ 256 (347)
.......++++|+.++..+..++..+
T Consensus 188 g~~~~~~i~~~Dva~~~~~~l~~~~~~~ 215 (313)
T 1qyd_A 188 GNVKGIWVDEDDVGTYTIKSIDDPQTLN 215 (313)
T ss_dssp SCSEEEEECHHHHHHHHHHHTTCGGGSS
T ss_pred CCceEEEEEHHHHHHHHHHHHhCcccCC
Confidence 01122468999999988777654333
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.9e-16 Score=143.44 Aligned_cols=196 Identities=12% Similarity=-0.006 Sum_probs=127.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++||||||||+||++++++|+++|++|++++|+........+.+.. ......+.++.+|++
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Dl~--- 68 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKPVLELEERDLS--- 68 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE---------------EECSCGGGCCHHHHT---
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh---------------hccCCCeeEEeCccc---
Confidence 58999999999999999999999999999999976520000000000 001123445555554
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++|+|||+||.... ..... .....++ |+.++..+++++... +.+++|++||.. .
T Consensus 69 --------------~~d~vi~~a~~~~~-~~~~~----~~~~~~~-n~~~~~~ll~a~~~~-----~v~~~v~~SS~~-v 122 (321)
T 3vps_A 69 --------------DVRLVYHLASHKSV-PRSFK----QPLDYLD-NVDSGRHLLALCTSV-----GVPKVVVGSTCE-V 122 (321)
T ss_dssp --------------TEEEEEECCCCCCH-HHHTT----STTTTHH-HHHHHHHHHHHHHHH-----TCCEEEEEEEGG-G
T ss_pred --------------cCCEEEECCccCCh-HHHHh----CHHHHHH-HHHHHHHHHHHHHHc-----CCCeEEEecCHH-H
Confidence 69999999997541 11111 1123455 999999888888654 246899999862 2
Q ss_pred CC-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCe-EEEEeeCCcccCcccccCcc--cchhhh-----hh
Q 019009 172 GS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLLLSGST--IQNKQM-----FN 232 (347)
Q Consensus 172 ~~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI-~v~~i~PG~v~T~~~~~~~~--~~~~~~-----~~ 232 (347)
.. +......|+.+|.+.+.+++.++.+ .|+ +++.+.|+.+.++....... ...... ..
T Consensus 123 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 199 (321)
T 3vps_A 123 YGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELP 199 (321)
T ss_dssp GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEE
T ss_pred hCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeE
Confidence 11 1122468999999999999999876 478 99999999998775332100 000000 00
Q ss_pred --------hccCCHHHHHHHHhhhhhhccc
Q 019009 233 --------IICELPETVARTLVPRIRVVKG 254 (347)
Q Consensus 233 --------~~~~~pe~~a~~~~~~~~~~~~ 254 (347)
......+++|+.++..+..+..
T Consensus 200 ~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 229 (321)
T 3vps_A 200 VEGDGEQRRDFTYITDVVDKLVALANRPLP 229 (321)
T ss_dssp EETTSCCEECEEEHHHHHHHHHHGGGSCCC
T ss_pred EeCCCCceEceEEHHHHHHHHHHHHhcCCC
Confidence 0112578999999988876654
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.5e-16 Score=140.05 Aligned_cols=182 Identities=14% Similarity=0.047 Sum_probs=126.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++||||| +|+||++++++|+++|++|++++|+.+++ ...+.++.+|++|.+
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------------------~~~~~~~~~Dl~d~~ 54 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------------------PAGVQTLIADVTRPD 54 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------------------CTTCCEEECCTTCGG
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------------------ccCCceEEccCCChH
Confidence 47899999 59999999999999999999999987641 135778999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ +++|+|||+||.. .++.+..+++|+.++..+++++. +. +.+++|++||.. .
T Consensus 55 ~~~~~~~------~~~d~vih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~----~~-~~~~~v~~SS~~-v 112 (286)
T 3gpi_A 55 TLASIVH------LRPEILVYCVAAS----------EYSDEHYRLSYVEGLRNTLSALE----GA-PLQHVFFVSSTG-V 112 (286)
T ss_dssp GCTTGGG------GCCSEEEECHHHH----------HHC-----CCSHHHHHHHHHHTT----TS-CCCEEEEEEEGG-G
T ss_pred HHHHhhc------CCCCEEEEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHh----hC-CCCEEEEEcccE-E
Confidence 8877664 3699999999862 13446778899999888887764 33 357899999862 2
Q ss_pred CC-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch-hhhh-----hhc
Q 019009 172 GS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQMF-----NII 234 (347)
Q Consensus 172 ~~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~-~~~~-----~~~ 234 (347)
.. +......|+.+|.+.+.+ +.. ++++.+.|+.+..+.......... .... ...
T Consensus 113 yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 183 (286)
T 3gpi_A 113 YGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTN 183 (286)
T ss_dssp CCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEEC
T ss_pred EcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeE
Confidence 11 112346899999999888 432 789999999997764321100000 0000 001
Q ss_pred cCCHHHHHHHHhhhhhhc
Q 019009 235 CELPETVARTLVPRIRVV 252 (347)
Q Consensus 235 ~~~pe~~a~~~~~~~~~~ 252 (347)
....+++|+.++..+..+
T Consensus 184 ~i~v~Dva~~~~~~~~~~ 201 (286)
T 3gpi_A 184 RIHRDDGAAFIAYLIQQR 201 (286)
T ss_dssp EEEHHHHHHHHHHHHHHH
T ss_pred EEEHHHHHHHHHHHHhhh
Confidence 125789999998888775
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=7.4e-15 Score=135.84 Aligned_cols=184 Identities=10% Similarity=0.096 Sum_probs=117.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||||||+||++++++|+++|++|++++|+++...+..+++.. ..+.++.+|++|.+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-------------------~~v~~v~~Dl~d~~ 71 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-------------------LGAIIVKGELDEHE 71 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-------------------TTCEEEECCTTCHH
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-------------------CCCEEEEecCCCHH
Confidence 46899999999999999999999999999999987522222233322 24778999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ ++|+|||++|... +.+. +.+++.+++.+.-+++|. |+.+..
T Consensus 72 ~l~~a~~-------~~d~vi~~a~~~~--------------------~~~~----~~l~~aa~~~g~v~~~v~-S~~g~~ 119 (318)
T 2r6j_A 72 KLVELMK-------KVDVVISALAFPQ--------------------ILDQ----FKILEAIKVAGNIKRFLP-SDFGVE 119 (318)
T ss_dssp HHHHHHT-------TCSEEEECCCGGG--------------------STTH----HHHHHHHHHHCCCCEEEC-SCCSSC
T ss_pred HHHHHHc-------CCCEEEECCchhh--------------------hHHH----HHHHHHHHhcCCCCEEEe-eccccC
Confidence 9888765 5899999998521 2223 344444444321456763 443211
Q ss_pred CC----CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc----Ccccc-----hhhhhhhccCCH
Q 019009 172 GS----STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS----GSTIQ-----NKQMFNIICELP 238 (347)
Q Consensus 172 ~~----~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~----~~~~~-----~~~~~~~~~~~p 238 (347)
.. ..|....| .+|.+++.+.+. .|+.++.+.||++..++... ..... ...........+
T Consensus 120 ~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 191 (318)
T 2r6j_A 120 EDRINALPPFEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYE 191 (318)
T ss_dssp TTTCCCCHHHHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECH
T ss_pred cccccCCCCcchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeH
Confidence 11 11223568 999998887753 47888899999876543211 00000 000011122368
Q ss_pred HHHHHHHhhhhhhccc
Q 019009 239 ETVARTLVPRIRVVKG 254 (347)
Q Consensus 239 e~~a~~~~~~~~~~~~ 254 (347)
+++++.++..+..++.
T Consensus 192 ~Dva~~~~~~l~~~~~ 207 (318)
T 2r6j_A 192 QDIGLYTIKVATDPRA 207 (318)
T ss_dssp HHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHhcCccc
Confidence 9999999887766543
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=133.49 Aligned_cols=186 Identities=13% Similarity=0.159 Sum_probs=117.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHH--HHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESV--RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+++|+||||||+||++++++|+++|++|++++|+.... .+..+.++.. ....+.++.+|++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l----------------~~~~v~~v~~D~~d 67 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF----------------KASGANIVHGSIDD 67 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH----------------HTTTCEEECCCTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH----------------HhCCCEEEEeccCC
Confidence 57899999999999999999999999999999985321 1111122111 11357789999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.++++ ++|+|||++|... +.+... +++.+++.+.-+++| .|+.+
T Consensus 68 ~~~l~~~~~-------~~d~vi~~a~~~~--------------------~~~~~~----l~~aa~~~g~v~~~v-~S~~g 115 (308)
T 1qyc_A 68 HASLVEAVK-------NVDVVISTVGSLQ--------------------IESQVN----IIKAIKEVGTVKRFF-PSEFG 115 (308)
T ss_dssp HHHHHHHHH-------TCSEEEECCCGGG--------------------SGGGHH----HHHHHHHHCCCSEEE-CSCCS
T ss_pred HHHHHHHHc-------CCCEEEECCcchh--------------------hhhHHH----HHHHHHhcCCCceEe-ecccc
Confidence 999888775 5899999998521 223333 344444432145776 35442
Q ss_pred CCC----CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-----chhh-------hhhh
Q 019009 170 SGG----SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNKQ-------MFNI 233 (347)
Q Consensus 170 ~~~----~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-----~~~~-------~~~~ 233 (347)
... ...|....| .+|.+++.+.+. .|+.++.+.||++.+++....... .... ....
T Consensus 116 ~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
T 1qyc_A 116 NDVDNVHAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARV 187 (308)
T ss_dssp SCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEE
T ss_pred cCccccccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceE
Confidence 111 112334578 999999887753 368888899998866543211100 0000 0011
Q ss_pred ccCCHHHHHHHHhhhhhhcc
Q 019009 234 ICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 234 ~~~~pe~~a~~~~~~~~~~~ 253 (347)
....++++++.++..+..++
T Consensus 188 ~~i~~~Dva~~~~~~l~~~~ 207 (308)
T 1qyc_A 188 VFVKEEDIGTFTIKAVDDPR 207 (308)
T ss_dssp EEECHHHHHHHHHTTSSCGG
T ss_pred EEecHHHHHHHHHHHHhCcc
Confidence 22367999999987776554
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.4e-14 Score=134.05 Aligned_cols=186 Identities=12% Similarity=0.063 Sum_probs=118.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-h----HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-E----SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~----~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
+++++||||||+||++++++|+++|++|++++|+. . ...+..+++.. ..+.++.+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~-------------------~~v~~v~~D 64 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS-------------------MGVTIIEGE 64 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH-------------------TTCEEEECC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc-------------------CCcEEEEec
Confidence 57899999999999999999999999999999986 1 12222222322 347789999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++|.+++.++++ ++|+|||++|... +.+. +.+++.+++.+.-++|| .|
T Consensus 65 ~~d~~~l~~a~~-------~~d~vi~~a~~~~--------------------~~~~----~~l~~aa~~~g~v~~~v-~S 112 (321)
T 3c1o_A 65 MEEHEKMVSVLK-------QVDIVISALPFPM--------------------ISSQ----IHIINAIKAAGNIKRFL-PS 112 (321)
T ss_dssp TTCHHHHHHHHT-------TCSEEEECCCGGG--------------------SGGG----HHHHHHHHHHCCCCEEE-CS
T ss_pred CCCHHHHHHHHc-------CCCEEEECCCccc--------------------hhhH----HHHHHHHHHhCCccEEe-cc
Confidence 999999888765 5899999998521 2233 34444444431145776 34
Q ss_pred CCCCC----CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcc-----cchhh-------h
Q 019009 167 GAGSG----GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST-----IQNKQ-------M 230 (347)
Q Consensus 167 S~~~~----~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~-----~~~~~-------~ 230 (347)
+.+.. ....|....| .+|.+++.+.+. .|++++.|.||++.+++...... ..... .
T Consensus 113 ~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (321)
T 3c1o_A 113 DFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGE 184 (321)
T ss_dssp CCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSC
T ss_pred ccccCccccccCCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCC
Confidence 33211 1111224579 999999988762 36888889999886643211000 00000 0
Q ss_pred hhhccCCHHHHHHHHhhhhhhccccc
Q 019009 231 FNIICELPETVARTLVPRIRVVKGSG 256 (347)
Q Consensus 231 ~~~~~~~pe~~a~~~~~~~~~~~~~~ 256 (347)
.......++++|+.++..+..++..+
T Consensus 185 ~~~~~i~~~Dva~~~~~~l~~~~~~g 210 (321)
T 3c1o_A 185 TKFVLNYEEDIAKYTIKVACDPRCCN 210 (321)
T ss_dssp CEEEEECHHHHHHHHHHHHHCGGGTT
T ss_pred cceeEeeHHHHHHHHHHHHhCccccC
Confidence 11122468999999988777654333
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.5e-13 Score=124.94 Aligned_cols=178 Identities=12% Similarity=0.059 Sum_probs=120.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++|||||| |.||.+++++|+++|++|++++|++++.+.. .. ..+.++.+|++|.+
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-------------------~~~~~~~~D~~d~~ 60 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI----RA-------------------SGAEPLLWPGEEPS 60 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHH----HH-------------------TTEEEEESSSSCCC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhH----hh-------------------CCCeEEEecccccc
Confidence 478999998 9999999999999999999999998765432 11 35788999999933
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-CCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-~~~g~Iv~vsS~~~ 170 (347)
+.++|+|||+||.... . .. .++.++..+++. .+.+++|++||.+.
T Consensus 61 ------------~~~~d~vi~~a~~~~~-~-----~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~v 106 (286)
T 3ius_A 61 ------------LDGVTHLLISTAPDSG-G-----DP----------------VLAALGDQIAARAAQFRWVGYLSTTAV 106 (286)
T ss_dssp ------------CTTCCEEEECCCCBTT-B-----CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGG
T ss_pred ------------cCCCCEEEECCCcccc-c-----cH----------------HHHHHHHHHHhhcCCceEEEEeeccee
Confidence 3579999999997541 1 11 123444445442 13468999998621
Q ss_pred CC----------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh---h----hhh
Q 019009 171 GG----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ---M----FNI 233 (347)
Q Consensus 171 ~~----------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~---~----~~~ 233 (347)
-. .+......|+.+|.+.+.+.+.+ .|++++.+.||.+..+............ + ...
T Consensus 107 yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 180 (286)
T 3ius_A 107 YGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVF 180 (286)
T ss_dssp GCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCB
T ss_pred cCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCccc
Confidence 10 01122357999999999988766 5899999999999876422111100000 0 001
Q ss_pred ccCCHHHHHHHHhhhhhhcc
Q 019009 234 ICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 234 ~~~~pe~~a~~~~~~~~~~~ 253 (347)
.....+++|+.++..+..+.
T Consensus 181 ~~i~v~Dva~a~~~~~~~~~ 200 (286)
T 3ius_A 181 SRIHVEDIAQVLAASMARPD 200 (286)
T ss_dssp CEEEHHHHHHHHHHHHHSCC
T ss_pred ceEEHHHHHHHHHHHHhCCC
Confidence 11346899999998887665
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.3e-13 Score=128.52 Aligned_cols=171 Identities=12% Similarity=0.045 Sum_probs=121.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+||||||||+||++++++|+++|+ +|+..+|+ +|.++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------------------~d~~~ 39 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------------------TKEEE 39 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------------------CCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------------------CCHHH
Confidence 699999999999999999999998 77766552 56677
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++ ++|+|||+||...+ . +.+..+++|+.++..+++++. +.+...++|++||.. ..
T Consensus 40 l~~~~~-------~~d~Vih~a~~~~~-~--------~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~-~~ 98 (369)
T 3st7_A 40 LESALL-------KADFIVHLAGVNRP-E--------HDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQ-AT 98 (369)
T ss_dssp HHHHHH-------HCSEEEECCCSBCT-T--------CSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGG-GG
T ss_pred HHHHhc-------cCCEEEECCcCCCC-C--------CHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchh-hc
Confidence 777665 48999999997542 1 234467789999888888763 332234899999873 22
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh----hh-----h-------hhccC
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK----QM-----F-------NIICE 236 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~----~~-----~-------~~~~~ 236 (347)
. ...|+.+|.+.+.+.+.++++. |++++.+.|+.+..+........... .. . .....
T Consensus 99 ~----~~~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 171 (369)
T 3st7_A 99 Q----DNPYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLN 171 (369)
T ss_dssp S----CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEE
T ss_pred C----CCCchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEE
Confidence 1 5689999999999999998885 68999999999977643221100000 00 0 00112
Q ss_pred CHHHHHHHHhhhhhhccc
Q 019009 237 LPETVARTLVPRIRVVKG 254 (347)
Q Consensus 237 ~pe~~a~~~~~~~~~~~~ 254 (347)
..+++|+.++..+..+..
T Consensus 172 ~v~Dva~~~~~~l~~~~~ 189 (369)
T 3st7_A 172 YVDDIVAEIKRAIEGTPT 189 (369)
T ss_dssp EHHHHHHHHHHHHHTCCC
T ss_pred EHHHHHHHHHHHHhCCcc
Confidence 478999999888776654
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.5e-13 Score=127.57 Aligned_cols=160 Identities=15% Similarity=0.094 Sum_probs=112.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-----~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
+|+||||||||+||.+++++|+++| ++|++++|++.... + ...++.++.+|
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-------------------~~~~~~~~~~D 56 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-------------------EDNPINYVQCD 56 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-------------------CSSCCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-------------------ccCceEEEEee
Confidence 4789999999999999999999999 99999999865421 0 12467889999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE---
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF--- 163 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv--- 163 (347)
++|.+++.++++. ..++|+|||+||... ++.+..+++|+.++.++++++.+... +-.++|
T Consensus 57 l~d~~~~~~~~~~----~~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~---~~~~~v~~~ 119 (364)
T 2v6g_A 57 ISDPDDSQAKLSP----LTDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP---NLKHISLQT 119 (364)
T ss_dssp TTSHHHHHHHHTT----CTTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT---TCCEEEEEC
T ss_pred cCCHHHHHHHHhc----CCCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc---ccceEEecc
Confidence 9999988877642 224999999999642 13577889999999999998865421 134565
Q ss_pred ----EEcCCCC-CCC------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCC-eEEEEeeCCcccCccc
Q 019009 164 ----NMDGAGS-GGS------------STPLTAVYGSTKCGLRQLQASLFKESKRSK-VGVHTASPGMVLTDLL 219 (347)
Q Consensus 164 ----~vsS~~~-~~~------------~~~~~~~Y~asKaal~~~~~~La~el~~~g-I~v~~i~PG~v~T~~~ 219 (347)
++||... +.. ..|....|. +.+.+.+.++.+ .| +++..+.|+.+..+..
T Consensus 120 g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~ 186 (364)
T 2v6g_A 120 GRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVEK---KEGLTWSVHRPGNIFGFSP 186 (364)
T ss_dssp CTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHTT---STTCEEEEEEESSEECCCT
T ss_pred CceEEEechhhccccccCCCCCCccccCCccchhhH----HHHHHHHHHhhc---CCCceEEEECCCceeCCCC
Confidence 6776521 110 011233562 334444444332 45 9999999999987643
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-12 Score=129.80 Aligned_cols=189 Identities=13% Similarity=0.083 Sum_probs=125.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++||||||||+||.++++.|+++|++|++++|+..+. ..+.+|+.+..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------------------------~~v~~d~~~~~ 195 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------------------------GKRFWDPLNPA 195 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------------------------TCEECCTTSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------------------------cceeecccchh
Confidence 57999999999999999999999999999999986531 12567776431
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
.+.+.++|+|||+||.... . ..+.+..+..+++|+.++.++++++. ++. +.+++|++||.+.-
T Consensus 196 ---------~~~l~~~D~Vih~A~~~~~-~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~-~~~r~V~~SS~~vy 258 (516)
T 3oh8_A 196 ---------SDLLDGADVLVHLAGEPIF-G---RFNDSHKEAIRESRVLPTKFLAELVA---EST-QCTTMISASAVGFY 258 (516)
T ss_dssp ---------TTTTTTCSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH---HCS-SCCEEEEEEEGGGG
T ss_pred ---------HHhcCCCCEEEECCCCccc-c---ccchhHHHHHHHHHHHHHHHHHHHHH---hcC-CCCEEEEeCcceEe
Confidence 2233579999999997531 2 34556678899999999999999743 222 45689999985211
Q ss_pred C----------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhh-------hh---
Q 019009 172 G----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-------MF--- 231 (347)
Q Consensus 172 ~----------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~-------~~--- 231 (347)
. ...+....|+.+|...+.+.+. +...|++++.+.||.+.++... ........ ..
T Consensus 259 g~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~-~~~~~~~~~~~g~~~~~g~g 333 (516)
T 3oh8_A 259 GHDRGDEILTEESESGDDFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGG-MLPLLKTLFSTGLGGKFGDG 333 (516)
T ss_dssp CSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBS-HHHHHHHTTC---CCCCTTS
T ss_pred cCCCCCCccCCCCCCCcChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCC-hHHHHHHHHHhCCCcccCCC
Confidence 1 0112345688888877665432 3346899999999999886410 00000000 00
Q ss_pred --hhccCCHHHHHHHHhhhhhhcc
Q 019009 232 --NIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 232 --~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
.......+++|+.++..+..+.
T Consensus 334 ~~~~~~i~v~Dva~ai~~~l~~~~ 357 (516)
T 3oh8_A 334 TSWFSWIAIDDLTDIYYRAIVDAQ 357 (516)
T ss_dssp CCEECEEEHHHHHHHHHHHHHCTT
T ss_pred CceEceEeHHHHHHHHHHHHhCcc
Confidence 0011247899999988776654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.7e-14 Score=129.07 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=81.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++||||++|||+++++.|+++|++|++++|+.+++++..+++... ..+.++.+|+++.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~------------------~~~~~~~~D~~~~ 179 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR------------------FKVNVTAAETADD 179 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------------------HTCCCEEEECCSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc------------------CCcEEEEecCCCH
Confidence 4699999999999999999999999999999999999888887777542 1355678999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCH-HHHHHHHHhhhhHHH
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIVSTNLVGSI 143 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-e~~~~~~~vN~~g~~ 143 (347)
++++++++ .+|+||||+|+.....++.+.+. ++++.++++|+.+++
T Consensus 180 ~~~~~~~~-------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 180 ASRAEAVK-------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp HHHHHHTT-------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred HHHHHHHH-------hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 98877654 47999999986431122222222 344456777777665
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=3.9e-13 Score=117.69 Aligned_cols=189 Identities=11% Similarity=0.087 Sum_probs=111.2
Q ss_pred CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 019009 11 CTCRWFSVVS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74 (347)
Q Consensus 11 ~~k~vlITGa----------------s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 74 (347)
.||++||||| |+|||+++|+.|+++|++|++++|+.. ++ . +
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~----~------------- 63 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T----P------------- 63 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C----C-------------
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c----C-------------
Confidence 4799999999 689999999999999999999988642 10 0 0
Q ss_pred ccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHH--HHhhhhHHHHHHHHHHHH
Q 019009 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI--VSTNLVGSILCTREAMRV 152 (347)
Q Consensus 75 ~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~--~~vN~~g~~~l~~~~lp~ 152 (347)
.+ + -.+|+++.++ +++.+.+.++++|++|||||+.. +.++ +...+.+.+. -+.++.-.+..+.-+++.
T Consensus 64 -~g--~--~~~dv~~~~~---~~~~v~~~~~~~Dili~~Aav~d-~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~ 133 (226)
T 1u7z_A 64 -PF--V--KRVDVMTALE---MEAAVNASVQQQNIFIGCAAVAD-YRAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAG 133 (226)
T ss_dssp -TT--E--EEEECCSHHH---HHHHHHHHGGGCSEEEECCBCCS-EEES-SCCSSCC-------CEEEEEEEECCCHHHH
T ss_pred -CC--C--eEEccCcHHH---HHHHHHHhcCCCCEEEECCcccC-CCCc-cCChHHhccccccCCceEEEEeecHHHHHH
Confidence 11 1 2457777544 55667778899999999999865 3444 3333334441 133444445555667777
Q ss_pred hHcCCCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCc-ccCcccccCc--c-cchh
Q 019009 153 MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM-VLTDLLLSGS--T-IQNK 228 (347)
Q Consensus 153 l~~~~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~-v~T~~~~~~~--~-~~~~ 228 (347)
+.+....+. +.|+ + +... +.+.+....++.++|+.+.+..|-. ..+.|..... . ....
T Consensus 134 l~~~~~~~~-~~VG-F-aaEt---------------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~ 195 (226)
T 1u7z_A 134 VAALKDHRP-YVVG-F-AAET---------------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQD 195 (226)
T ss_dssp HHHCSSSCC-EEEE-E-EEES---------------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETT
T ss_pred HHhhhcCCc-EEEE-c-chhh---------------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCC
Confidence 765312232 2332 1 1111 2256666677777787777776654 2333321110 0 0010
Q ss_pred hhhhhccCCHHHHHHHHhhhhh
Q 019009 229 QMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 229 ~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
........+++++|+.++..+.
T Consensus 196 ~~~~~~~~sK~~vA~~I~~~i~ 217 (226)
T 1u7z_A 196 GDKVLPLERKELLGQLLLDEIV 217 (226)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHH
T ss_pred CcEecCCCCHHHHHHHHHHHHH
Confidence 0112334578899999887764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-09 Score=99.62 Aligned_cols=191 Identities=15% Similarity=0.104 Sum_probs=113.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+||||||||.||++++++|.++|++|+++.|++.+ ..+ ..| .+
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------------------~~~---~~~-----~~ 44 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------------------GRI---TWD-----EL 44 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------------------TEE---EHH-----HH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------------------Cee---ecc-----hh
Confidence 48999999999999999999999999999997542 111 111 11
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-CC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-GG 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~-~~ 172 (347)
..+...++|.+||.||... ..+....+.+..+..+++|+.++-.+.+++... ..+..++|+.||.+. +.
T Consensus 45 ------~~~~l~~~d~vihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~~vyg~ 114 (298)
T 4b4o_A 45 ------AASGLPSCDAAVNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGVAYYQP 114 (298)
T ss_dssp ------HHHCCCSCSEEEECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEGGGSCC
T ss_pred ------hHhhccCCCEEEEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeeeeeecC
Confidence 1123457999999998654 244445677777888899988887776655332 112345666665421 10
Q ss_pred ---------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch-----------hhhhh
Q 019009 173 ---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-----------KQMFN 232 (347)
Q Consensus 173 ---------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~-----------~~~~~ 232 (347)
.+......|+..|...+. +......++++..+.||.|..+.......... .....
T Consensus 115 ~~~~~~~E~~p~~~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~ 189 (298)
T 4b4o_A 115 SLTAEYDEDSPGGDFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQF 189 (298)
T ss_dssp CSSCCBCTTCCCSCSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSB
T ss_pred CCCCcccccCCccccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCce
Confidence 111122345544444332 12334678999999999987663110000000 00000
Q ss_pred hccCCHHHHHHHHhhhhhhccccc
Q 019009 233 IICELPETVARTLVPRIRVVKGSG 256 (347)
Q Consensus 233 ~~~~~pe~~a~~~~~~~~~~~~~~ 256 (347)
......+++++.++..+..++..+
T Consensus 190 ~~~ihv~Dva~a~~~~~~~~~~~g 213 (298)
T 4b4o_A 190 FPWIHIGDLAGILTHALEANHVHG 213 (298)
T ss_dssp CCEEEHHHHHHHHHHHHHCTTCCE
T ss_pred eecCcHHHHHHHHHHHHhCCCCCC
Confidence 011246899998888777665433
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-10 Score=106.91 Aligned_cols=164 Identities=13% Similarity=0.060 Sum_probs=107.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.+++||||+|.||..++..|+++|. +|++.++++ ++++....++.. . .+.++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-----------------~--~~~~~ 65 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-----------------C--AFPLL 65 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-----------------T--TCTTE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-----------------c--ccccc
Confidence 4799999999999999999999996 899999875 333332333322 0 11112
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.|+.+.++..+.+ .+.|++||.||... .+ ..+. +..+++|+.+...+.+++..+- +...+++
T Consensus 66 -~di~~~~~~~~a~-------~~~D~Vih~Ag~~~--~~--~~~~---~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vv 127 (327)
T 1y7t_A 66 -AGLEATDDPKVAF-------KDADYALLVGAAPR--KA--GMER---RDLLQVNGKIFTEQGRALAEVA---KKDVKVL 127 (327)
T ss_dssp -EEEEEESCHHHHT-------TTCSEEEECCCCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTCEEE
T ss_pred -CCeEeccChHHHh-------CCCCEEEECCCcCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhhc---CCCeEEE
Confidence 3665544444333 36899999999754 22 2233 4578999999998888876641 1245788
Q ss_pred EEcCCCC-------CCC-CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccC
Q 019009 164 NMDGAGS-------GGS-STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216 (347)
Q Consensus 164 ~vsS~~~-------~~~-~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T 216 (347)
++|+... ... +.+....|+.+|...+.+.+.+++.+ |+.+..|+|..|..
T Consensus 128 v~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G 185 (327)
T 1y7t_A 128 VVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWG 185 (327)
T ss_dssp ECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEB
T ss_pred EeCCchhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEc
Confidence 8876520 011 24445579999999999998888775 44545555554433
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.4e-10 Score=99.22 Aligned_cols=93 Identities=15% Similarity=0.229 Sum_probs=65.7
Q ss_pred cCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcc
Q 019009 10 SCTCRWFSVVS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 73 (347)
Q Consensus 10 ~~~k~vlITGa----------------s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 73 (347)
+.||+|||||| ||++|+++|+.|+++|++|++++|+..... .
T Consensus 1 ~~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~-------------- 58 (232)
T 2gk4_A 1 SNAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------E-------------- 58 (232)
T ss_dssp --CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------C--------------
T ss_pred CCCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------c--------------
Confidence 35899999999 788999999999999999999999753100 0
Q ss_pred cccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHH
Q 019009 74 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 132 (347)
Q Consensus 74 ~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~ 132 (347)
....+.. .|+. ++.++.+.+.+.++++|++|+|||+.. +.+....+.+.+.
T Consensus 59 --~~~~~~~--~~v~---s~~em~~~v~~~~~~~Dili~aAAvsD-~~p~~~~~~e~~~ 109 (232)
T 2gk4_A 59 --PHPNLSI--REIT---NTKDLLIEMQERVQDYQVLIHSMAVSD-YTPVYMTGLEEVQ 109 (232)
T ss_dssp --CCTTEEE--EECC---SHHHHHHHHHHHGGGCSEEEECSBCCS-EEEEEEEEHHHHH
T ss_pred --CCCCeEE--EEHh---HHHHHHHHHHHhcCCCCEEEEcCcccc-ccchhhcchhhhh
Confidence 0112222 2443 566667777778889999999999876 5665544555544
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=2e-09 Score=89.29 Aligned_cols=77 Identities=14% Similarity=0.058 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCChhHHH---HHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH--HHHHHHH
Q 019009 23 GLGKALAREFLLSGDRVVVASRSSESVR---MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP--ADVQKLS 97 (347)
Q Consensus 23 GIG~aiA~~la~~G~~Vil~~R~~~~l~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~--~~v~~~~ 97 (347)
-++.++++.|++.|++|++..|+.+... +..+.+++ .+.+...+++|++++ +++++++
T Consensus 27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~-----------------~G~~~~~i~~Dv~~~~~~~v~~~~ 89 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ-----------------AGMDYVYIPVDWQNPKVEDVEAFF 89 (157)
T ss_dssp CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH-----------------TTCEEEECCCCTTSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH-----------------cCCeEEEecCCCCCCCHHHHHHHH
Confidence 4789999999999999999998765432 12344444 456788899999999 9999999
Q ss_pred HHHHhhcCCccEEEEcCCCC
Q 019009 98 NFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 98 ~~i~~~~g~iD~li~nAG~~ 117 (347)
+.+.+++|+ |+||||||+.
T Consensus 90 ~~i~~~~G~-dVLVnnAgg~ 108 (157)
T 3gxh_A 90 AAMDQHKGK-DVLVHCLANY 108 (157)
T ss_dssp HHHHHTTTS-CEEEECSBSH
T ss_pred HHHHhcCCC-CEEEECCCCC
Confidence 999998999 9999999963
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.2e-08 Score=79.34 Aligned_cols=74 Identities=20% Similarity=0.135 Sum_probs=60.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+++++|+|+ |+||.++++.|.++| ++|++++|++++++... . ..+..+.+|+++.
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~-------------------~~~~~~~~d~~~~ 60 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R-------------------MGVATKQVDAKDE 60 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T-------------------TTCEEEECCTTCH
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h-------------------CCCcEEEecCCCH
Confidence 578999999 999999999999999 89999999988765432 1 2355688999998
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+++.++++ ++|++|+++|.
T Consensus 61 ~~~~~~~~-------~~d~vi~~~~~ 79 (118)
T 3ic5_A 61 AGLAKALG-------GFDAVISAAPF 79 (118)
T ss_dssp HHHHHHTT-------TCSEEEECSCG
T ss_pred HHHHHHHc-------CCCEEEECCCc
Confidence 88777653 68999999963
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.1e-08 Score=95.88 Aligned_cols=82 Identities=15% Similarity=0.185 Sum_probs=70.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG---DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G---~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
++|+|+|| ||||+++++.|+++| .+|++++|+.+++++..+++... .+.++..+.+|++|
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~----------------~~~~~~~~~~D~~d 64 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK----------------GYGEIDITTVDADS 64 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT----------------TCCCCEEEECCTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh----------------cCCceEEEEecCCC
Confidence 68999999 899999999999999 38999999999998888777542 12357788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.++++++++.. ++|+||||+|.
T Consensus 65 ~~~l~~~l~~~-----~~DvVin~ag~ 86 (405)
T 4ina_A 65 IEELVALINEV-----KPQIVLNIALP 86 (405)
T ss_dssp HHHHHHHHHHH-----CCSEEEECSCG
T ss_pred HHHHHHHHHhh-----CCCEEEECCCc
Confidence 99999998865 68999999975
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.67 E-value=4.1e-08 Score=84.06 Aligned_cols=105 Identities=15% Similarity=0.188 Sum_probs=72.2
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|++++||||++|||+++++.+...|++|++++|++++++.+ ++ .+.. ..+|.
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~-----------------~g~~---~~~d~ 90 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SR-----------------LGVE---YVGDS 90 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HT-----------------TCCS---EEEET
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-----------------cCCC---EEeeC
Confidence 345689999999999999999999999999999999998765432 11 1222 12477
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++.+..+.+.+... .+++|++|+|+|. + ..+.+++.|+ .+|++|++++
T Consensus 91 ~~~~~~~~~~~~~~--~~~~D~vi~~~g~------------~---------------~~~~~~~~l~---~~G~~v~~g~ 138 (198)
T 1pqw_A 91 RSVDFADEILELTD--GYGVDVVLNSLAG------------E---------------AIQRGVQILA---PGGRFIELGK 138 (198)
T ss_dssp TCSTHHHHHHHHTT--TCCEEEEEECCCT------------H---------------HHHHHHHTEE---EEEEEEECSC
T ss_pred CcHHHHHHHHHHhC--CCCCeEEEECCch------------H---------------HHHHHHHHhc---cCCEEEEEcC
Confidence 76654444433221 1369999999972 0 0244556665 3689999975
Q ss_pred C
Q 019009 168 A 168 (347)
Q Consensus 168 ~ 168 (347)
.
T Consensus 139 ~ 139 (198)
T 1pqw_A 139 K 139 (198)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.1e-09 Score=104.89 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=67.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++||||+ |+|+++++.|++.|++|++++|+.++++++.+++. .++. ++.|
T Consensus 363 ~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~--------------------~~~~----~~~d- 416 (523)
T 2o7s_A 363 ASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEAIG--------------------GKAL----SLTD- 416 (523)
T ss_dssp ---CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT--------------------C-CE----ETTT-
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------------------Ccee----eHHH-
Confidence 46899999995 99999999999999999999999988776655431 1221 1112
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC----CCCCCCCCHHHHHHHHHhhhhHHH
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG----FKPLLQFTNEEIEQIVSTNLVGSI 143 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~----~~~~~~~~~e~~~~~~~vN~~g~~ 143 (347)
+.++ ..+.+|+||||+|+... ..++.+.+.+.+..++++|+.+..
T Consensus 417 --l~~~------~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~ 465 (523)
T 2o7s_A 417 --LDNY------HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI 465 (523)
T ss_dssp --TTTC--------CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred --hhhc------cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence 1100 11358999999997531 134566667778889999998763
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=3.8e-08 Score=91.36 Aligned_cols=81 Identities=16% Similarity=0.159 Sum_probs=61.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|++++||||++|||+++++.+...|++|++++|++++++.+ +++ +.. ..+|.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~--------------------g~~---~~~d~~ 198 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI--------------------GFD---AAFNYK 198 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCS---EEEETT
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc--------------------CCc---EEEecC
Confidence 45689999999999999999999999999999999998876544 322 221 234777
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
+.+++.+.+.++.. +++|++|+|+|
T Consensus 199 ~~~~~~~~~~~~~~--~~~d~vi~~~g 223 (333)
T 1v3u_A 199 TVNSLEEALKKASP--DGYDCYFDNVG 223 (333)
T ss_dssp SCSCHHHHHHHHCT--TCEEEEEESSC
T ss_pred CHHHHHHHHHHHhC--CCCeEEEECCC
Confidence 64455555554433 57999999998
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=3.1e-11 Score=116.47 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=38.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT 54 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~ 54 (347)
..||+++|||++ |||+++|+.|++.|++|++++|++.+.+++..
T Consensus 263 L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~ 306 (488)
T 3ond_A 263 IAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM 306 (488)
T ss_dssp CTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred ccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 457999999998 99999999999999999999999887655443
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.60 E-value=2e-08 Score=91.57 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++|||++ |+|+++|+.|++.| +|++++|+.+++++..+++..... .. ..+.+|+++.
T Consensus 127 ~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~----------------~~-~~~~~d~~~~ 187 (287)
T 1nvt_A 127 KDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN----------------KK-FGEEVKFSGL 187 (287)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT----------------CC-HHHHEEEECT
T ss_pred CCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc----------------cc-cceeEEEeeH
Confidence 46999999997 99999999999999 999999999988888777654210 00 0112344441
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
.+.++++|+||||+|...
T Consensus 188 ----------~~~~~~~DilVn~ag~~~ 205 (287)
T 1nvt_A 188 ----------DVDLDGVDIIINATPIGM 205 (287)
T ss_dssp ----------TCCCTTCCEEEECSCTTC
T ss_pred ----------HHhhCCCCEEEECCCCCC
Confidence 345678999999999754
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.54 E-value=1.3e-07 Score=91.55 Aligned_cols=77 Identities=19% Similarity=0.115 Sum_probs=61.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+++||| +||||+++++.|++.|++|++++|+.+++++..+++ ..+..+.+|++|.+
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~---------------------~~~~~~~~Dv~d~~ 60 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------------------QHSTPISLDVNDDA 60 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC---------------------TTEEEEECCTTCHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc---------------------CCceEEEeecCCHH
Confidence 58899998 799999999999999999999999987654432211 13567889999998
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
++.++++ ++|+||||++..
T Consensus 61 ~l~~~l~-------~~DvVIn~a~~~ 79 (450)
T 1ff9_A 61 ALDAEVA-------KHDLVISLIPYT 79 (450)
T ss_dssp HHHHHHT-------TSSEEEECCC--
T ss_pred HHHHHHc-------CCcEEEECCccc
Confidence 8877653 699999999863
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.52 E-value=1.9e-07 Score=88.15 Aligned_cols=104 Identities=15% Similarity=0.199 Sum_probs=73.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+ +.. +.+|.++.
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~--------------------g~~---~~~~~~~~ 220 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF--------------------GGR---VITLTATE 220 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--------------------TTS---EEEEECCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc--------------------Cce---EEEecCCH
Confidence 3599999999 89999999999999999999999998776543322 122 35677777
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+++.+++. +.|++|+++|.... . .+..+++..++.|+ ++++||++++.
T Consensus 221 ~~l~~~~~-------~~DvVi~~~g~~~~-~-------------------~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 221 ANIKKSVQ-------HADLLIGAVLVPGA-K-------------------APKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHHHH-------HCSEEEECCC---------------------------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHHHHh-------CCCEEEECCCCCcc-c-------------------cchhHHHHHHHhhc---CCCEEEEEecC
Confidence 77766653 58999999986421 0 01234566777775 46899999764
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.46 E-value=5.1e-07 Score=84.28 Aligned_cols=105 Identities=13% Similarity=0.058 Sum_probs=75.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|+++||+||++|||+++++.+...|++|++++|++++++.+ +++ +.. ..+|++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~--------------------g~~---~~~d~~ 222 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI--------------------GGE---VFIDFT 222 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT--------------------TCC---EEEETT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc--------------------CCc---eEEecC
Confidence 45689999999999999999999999999999999998876432 221 222 234777
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.+++.+.+.++... ++|++|+|+|.. + ..+.+++.|+ .+|+||++++.
T Consensus 223 ~~~~~~~~~~~~~~~--~~D~vi~~~g~~-----------~---------------~~~~~~~~l~---~~G~iv~~g~~ 271 (347)
T 2hcy_A 223 KEKDIVGAVLKATDG--GAHGVINVSVSE-----------A---------------AIEASTRYVR---ANGTTVLVGMP 271 (347)
T ss_dssp TCSCHHHHHHHHHTS--CEEEEEECSSCH-----------H---------------HHHHHTTSEE---EEEEEEECCCC
T ss_pred ccHhHHHHHHHHhCC--CCCEEEECCCcH-----------H---------------HHHHHHHHHh---cCCEEEEEeCC
Confidence 656666666655443 799999999831 0 2355555564 36899999764
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.40 E-value=6.3e-07 Score=83.11 Aligned_cols=83 Identities=10% Similarity=0.086 Sum_probs=59.9
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|++++||||++|||+++++.+...|++|++++|++++++.+. ++ +.. ..+|.
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~--------------------g~~---~~~d~ 197 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL--------------------GCH---HTINY 197 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEET
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCC---EEEEC
Confidence 3456899999999999999999999999999999999987765442 22 111 12466
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
++.+..+++.+.. .. .++|++|+|+|.
T Consensus 198 ~~~~~~~~i~~~~-~~-~~~d~vi~~~g~ 224 (333)
T 1wly_A 198 STQDFAEVVREIT-GG-KGVDVVYDSIGK 224 (333)
T ss_dssp TTSCHHHHHHHHH-TT-CCEEEEEECSCT
T ss_pred CCHHHHHHHHHHh-CC-CCCeEEEECCcH
Confidence 6655444444332 11 369999999984
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.38 E-value=5.5e-07 Score=83.29 Aligned_cols=105 Identities=9% Similarity=0.129 Sum_probs=73.0
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|++++||||++|||+++++.+...|++|++++|++++++.+.+ + +.. ..+|.
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~--------------------g~~---~~~~~ 192 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A--------------------GAW---QVINY 192 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H--------------------TCS---EEEET
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--------------------CCC---EEEEC
Confidence 34568999999999999999999999999999999999887654422 2 111 12466
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++.+..+.+.+... ..++|++|+|+|. . . .+..++.++ .+|+++.+++
T Consensus 193 ~~~~~~~~~~~~~~--~~~~D~vi~~~g~-~--~------------------------~~~~~~~l~---~~G~iv~~g~ 240 (327)
T 1qor_A 193 REEDLVERLKEITG--GKKVRVVYDSVGR-D--T------------------------WERSLDCLQ---RRGLMVSFGN 240 (327)
T ss_dssp TTSCHHHHHHHHTT--TCCEEEEEECSCG-G--G------------------------HHHHHHTEE---EEEEEEECCC
T ss_pred CCccHHHHHHHHhC--CCCceEEEECCch-H--H------------------------HHHHHHHhc---CCCEEEEEec
Confidence 66555554443321 1369999999982 1 0 244555564 3689999976
Q ss_pred C
Q 019009 168 A 168 (347)
Q Consensus 168 ~ 168 (347)
.
T Consensus 241 ~ 241 (327)
T 1qor_A 241 S 241 (327)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=6.4e-07 Score=83.40 Aligned_cols=82 Identities=20% Similarity=0.186 Sum_probs=59.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|+++||+||++|||.++++.+...|++|++++|++++++.+.+++ +.. ..+|.+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~--------------------g~~---~~~d~~ 209 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF--------------------GFD---DAFNYK 209 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS--------------------CCS---EEEETT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCc---eEEecC
Confidence 456899999999999999999999999999999999988765443221 222 123666
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
+.+++.+.+.++.. +++|++|+|+|
T Consensus 210 ~~~~~~~~~~~~~~--~~~d~vi~~~g 234 (345)
T 2j3h_A 210 EESDLTAALKRCFP--NGIDIYFENVG 234 (345)
T ss_dssp SCSCSHHHHHHHCT--TCEEEEEESSC
T ss_pred CHHHHHHHHHHHhC--CCCcEEEECCC
Confidence 54444444444432 47999999997
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3.3e-06 Score=77.60 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+|+++|+|+ +|+|++++..|++.|+ +|++++|+ .++.+++.+++... .+..+. ..+
T Consensus 153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~----------------~~~~~~--~~~ 213 (315)
T 3tnl_A 153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK----------------TDCKAQ--LFD 213 (315)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH----------------SSCEEE--EEE
T ss_pred cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh----------------cCCceE--Eec
Confidence 4799999998 6999999999999998 89999999 88888888877653 122233 345
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
+.+.+++.+.+. ..|+|||+....
T Consensus 214 ~~~~~~l~~~l~-------~aDiIINaTp~G 237 (315)
T 3tnl_A 214 IEDHEQLRKEIA-------ESVIFTNATGVG 237 (315)
T ss_dssp TTCHHHHHHHHH-------TCSEEEECSSTT
T ss_pred cchHHHHHhhhc-------CCCEEEECccCC
Confidence 666665554433 579999988654
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.33 E-value=1.1e-06 Score=85.18 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+|+|+|+ ||+|+++++.|++. |++|++++|+.+++++..++ ..+..+.+|+.|
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----------------------~~~~~~~~D~~d 78 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----------------------SGSKAISLDVTD 78 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----------------------GTCEEEECCTTC
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----------------------cCCcEEEEecCC
Confidence 3588999998 99999999999998 68999999998876654322 124566899999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
.+++.++++ ++|+|||+++..
T Consensus 79 ~~~l~~~l~-------~~DvVIn~tp~~ 99 (467)
T 2axq_A 79 DSALDKVLA-------DNDVVISLIPYT 99 (467)
T ss_dssp HHHHHHHHH-------TSSEEEECSCGG
T ss_pred HHHHHHHHc-------CCCEEEECCchh
Confidence 888777654 689999999863
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=7.5e-07 Score=83.40 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=59.6
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|++++|+||++|||.++++.+...|++|++++|++++++.+ +++ +.. ..+|.
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------g~~---~~~~~ 214 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL--------------------GAA---AGFNY 214 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH--------------------TCS---EEEET
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCc---EEEec
Confidence 345689999999999999999999999999999999998877654 222 112 23466
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.+..+.+.+.. . ..++|++|+|+|.
T Consensus 215 ~~~~~~~~~~~~~-~-~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 215 KKEDFSEATLKFT-K-GAGVNLILDCIGG 241 (354)
T ss_dssp TTSCHHHHHHHHT-T-TSCEEEEEESSCG
T ss_pred CChHHHHHHHHHh-c-CCCceEEEECCCc
Confidence 6654444433321 1 1369999999984
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.33 E-value=1.6e-06 Score=81.19 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=58.5
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|++++|+||++|||.++++.+...|++|++++|++++++.+ ++ .+.. ..+|.
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~--------------------~ga~---~~~d~ 222 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ--------------------NGAH---EVFNH 222 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH--------------------TTCS---EEEET
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH--------------------cCCC---EEEeC
Confidence 345689999999999999999999999999999999998876532 22 1222 23466
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
.+.+..+++.+.. . ..++|++|+|+|
T Consensus 223 ~~~~~~~~~~~~~-~-~~~~D~vi~~~G 248 (351)
T 1yb5_A 223 REVNYIDKIKKYV-G-EKGIDIIIEMLA 248 (351)
T ss_dssp TSTTHHHHHHHHH-C-TTCEEEEEESCH
T ss_pred CCchHHHHHHHHc-C-CCCcEEEEECCC
Confidence 6654444433322 1 126999999997
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=7.2e-07 Score=82.78 Aligned_cols=82 Identities=22% Similarity=0.153 Sum_probs=59.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|+++||+||++|||.++++.+...|++|++++|++++++.+.+++ +.. ...|..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~--------------------g~~---~~~~~~ 203 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL--------------------GFD---GAIDYK 203 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------------------CCS---EEEETT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCC---EEEECC
Confidence 456899999999999999999999999999999999998776543332 221 124666
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+.+..+.+.+ .. .+++|++|+|+|.
T Consensus 204 ~~~~~~~~~~-~~--~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 204 NEDLAAGLKR-EC--PKGIDVFFDNVGG 228 (336)
T ss_dssp TSCHHHHHHH-HC--TTCEEEEEESSCH
T ss_pred CHHHHHHHHH-hc--CCCceEEEECCCc
Confidence 5443333332 22 2479999999973
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=81.46 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=57.5
Q ss_pred ccCC--CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 9 WSCT--CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 9 ~~~~--k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
...| ++++||||++|||+++++.+...|+ +|++++|++++++.+.+++ +.. ..+
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~--------------------g~~---~~~ 212 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL--------------------GFD---AAI 212 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS--------------------CCS---EEE
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc--------------------CCc---eEE
Confidence 3457 9999999999999999999999999 9999999987765443222 111 234
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
|.++.+..+.+ .+... +++|++|+|+|
T Consensus 213 d~~~~~~~~~~-~~~~~--~~~d~vi~~~G 239 (357)
T 2zb4_A 213 NYKKDNVAEQL-RESCP--AGVDVYFDNVG 239 (357)
T ss_dssp ETTTSCHHHHH-HHHCT--TCEEEEEESCC
T ss_pred ecCchHHHHHH-HHhcC--CCCCEEEECCC
Confidence 66664333333 22222 26999999998
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.5e-06 Score=78.30 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=40.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~ 162 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLF 162 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHT
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHh
Confidence 4699999998 69999999999999999999999999887766654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.25 E-value=4.5e-06 Score=67.16 Aligned_cols=74 Identities=15% Similarity=0.298 Sum_probs=58.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++++|+|+ |.+|..+++.|.++|++|+++++++++.+... + . ...++..|.++++
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~-----------------~--~~~~~~gd~~~~~ 61 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----D-----------------E--GFDAVIADPTDES 61 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H-----------------T--TCEEEECCTTCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----H-----------------C--CCcEEECCCCCHH
Confidence 478999998 67999999999999999999999988765432 2 1 2456789999988
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
.++++ ...+.|++|.+.+
T Consensus 62 ~l~~~------~~~~~d~vi~~~~ 79 (141)
T 3llv_A 62 FYRSL------DLEGVSAVLITGS 79 (141)
T ss_dssp HHHHS------CCTTCSEEEECCS
T ss_pred HHHhC------CcccCCEEEEecC
Confidence 77654 2246899998775
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=2.5e-06 Score=68.42 Aligned_cols=75 Identities=13% Similarity=0.213 Sum_probs=56.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++++|+|+ |++|..+++.|.+.|++|++++|++++.+.. .+ . ....+..|.++.+
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~-----------------~--~~~~~~~d~~~~~ 61 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----AS-----------------Y--ATHAVIANATEEN 61 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TT-----------------T--CSEEEECCTTCHH
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH-----------------h--CCEEEEeCCCCHH
Confidence 578999998 9999999999999999999999987764321 11 1 2345678998876
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.++ ...+.|++|++++.
T Consensus 62 ~l~~~------~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 62 ELLSL------GIRNFEYVIVAIGA 80 (144)
T ss_dssp HHHTT------TGGGCSEEEECCCS
T ss_pred HHHhc------CCCCCCEEEECCCC
Confidence 55443 13468999999863
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=3.6e-06 Score=78.50 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=57.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
...|+++|||||++|||+++++.+... |++|+++++++++++.+ +++ +.. ...|.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------g~~---~~~~~ 223 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA--------------------GAD---YVINA 223 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH--------------------TCS---EEEET
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh--------------------CCC---EEecC
Confidence 456899999999999999999999998 99999999998876544 222 112 12355
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
++.+..+++. ++... +++|++|+|+|.
T Consensus 224 ~~~~~~~~~~-~~~~~-~~~d~vi~~~g~ 250 (347)
T 1jvb_A 224 SMQDPLAEIR-RITES-KGVDAVIDLNNS 250 (347)
T ss_dssp TTSCHHHHHH-HHTTT-SCEEEEEESCCC
T ss_pred CCccHHHHHH-HHhcC-CCceEEEECCCC
Confidence 5544333322 22211 589999999984
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.12 E-value=5.4e-06 Score=77.49 Aligned_cols=82 Identities=15% Similarity=0.068 Sum_probs=59.2
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|+++||+||++|||.++++.+...|++|++++|++++++.+. ++ +... ..|.
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l--------------------Ga~~---~~~~ 219 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL--------------------GAKR---GINY 219 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCSE---EEET
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc--------------------CCCE---EEeC
Confidence 3456899999999999999999999999999999999998875442 22 1111 2355
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.+..+.+.+ .. .+++|++|+|+|.
T Consensus 220 ~~~~~~~~~~~-~~--~~g~Dvvid~~g~ 245 (353)
T 4dup_A 220 RSEDFAAVIKA-ET--GQGVDIILDMIGA 245 (353)
T ss_dssp TTSCHHHHHHH-HH--SSCEEEEEESCCG
T ss_pred CchHHHHHHHH-Hh--CCCceEEEECCCH
Confidence 55444333333 22 3579999999984
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.12 E-value=1.1e-05 Score=73.09 Aligned_cols=48 Identities=17% Similarity=0.198 Sum_probs=43.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEEN 59 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~ 59 (347)
.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++...
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~ 174 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA 174 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 4699999998 7999999999999998 7999999999999888888653
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.09 E-value=7.7e-06 Score=76.09 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=71.5
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|+++||+||++|||+++++.+...|++|++++|++++++.+. ++ +... .+|.
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~--------------------ga~~---~~d~ 218 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL--------------------GADE---TVNY 218 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCSE---EEET
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc--------------------CCCE---EEcC
Confidence 3456899999999999999999999999999999999988775442 22 1111 2466
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++.+-.+. +.++.. ..++|++|+|+| .. ..+..++.++ .+|+++.+++
T Consensus 219 ~~~~~~~~-~~~~~~-~~~~d~vi~~~g-~~--------------------------~~~~~~~~l~---~~G~~v~~g~ 266 (343)
T 2eih_A 219 THPDWPKE-VRRLTG-GKGADKVVDHTG-AL--------------------------YFEGVIKATA---NGGRIAIAGA 266 (343)
T ss_dssp TSTTHHHH-HHHHTT-TTCEEEEEESSC-SS--------------------------SHHHHHHHEE---EEEEEEESSC
T ss_pred CcccHHHH-HHHHhC-CCCceEEEECCC-HH--------------------------HHHHHHHhhc---cCCEEEEEec
Confidence 66432222 222221 137999999998 21 0244556665 3689999976
Q ss_pred C
Q 019009 168 A 168 (347)
Q Consensus 168 ~ 168 (347)
.
T Consensus 267 ~ 267 (343)
T 2eih_A 267 S 267 (343)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.09 E-value=9.9e-06 Score=78.15 Aligned_cols=89 Identities=16% Similarity=0.099 Sum_probs=61.7
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE--e
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI--A 84 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 84 (347)
.....|++|||+||++|||.+.++.+...|++|+++.+++++++.+ +++ +.....- .
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l--------------------Ga~~~i~~~~ 274 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL--------------------GCDLVINRAE 274 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCCCEEEHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc--------------------CCCEEEeccc
Confidence 3456789999999999999999999999999999999988877544 221 2221111 1
Q ss_pred cCCC---------CHHHHHHHHHHHHhhcC-CccEEEEcCCC
Q 019009 85 CDVC---------EPADVQKLSNFAVNEFG-SIDIWINNAGT 116 (347)
Q Consensus 85 ~Dls---------~~~~v~~~~~~i~~~~g-~iD~li~nAG~ 116 (347)
.|+. +.++++.+.+.+.+..+ ++|++|+|+|.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~ 316 (447)
T 4a0s_A 275 LGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR 316 (447)
T ss_dssp HTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred ccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc
Confidence 2221 12445555666655544 69999999983
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.06 E-value=1.1e-05 Score=74.86 Aligned_cols=151 Identities=7% Similarity=0.041 Sum_probs=96.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCC----hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-------RVVVASRS----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
.+|+||||+|.+|..++..|+.+|. +|++.+++ +++++....++.... ..+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~-----------------~~~- 67 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA-----------------FPL- 67 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT-----------------CTT-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc-----------------ccc-
Confidence 4799999999999999999999885 79999998 666665555554310 011
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
..|+....+..+.+ .+.|++|+.||... .+ ..+.+ ..+..|+.....+++.+..+- +..++
T Consensus 68 --~~~i~~~~~~~~al-------~~aD~Vi~~ag~~~--~~--g~~r~---dl~~~N~~i~~~i~~~i~~~~---~p~a~ 128 (329)
T 1b8p_A 68 --LAGMTAHADPMTAF-------KDADVALLVGARPR--GP--GMERK---DLLEANAQIFTVQGKAIDAVA---SRNIK 128 (329)
T ss_dssp --EEEEEEESSHHHHT-------TTCSEEEECCCCCC--CT--TCCHH---HHHHHHHHHHHHHHHHHHHHS---CTTCE
T ss_pred --cCcEEEecCcHHHh-------CCCCEEEEeCCCCC--CC--CCCHH---HHHHHHHHHHHHHHHHHHHhc---CCCeE
Confidence 12333323333332 36899999999754 21 22333 457788777766666665541 13568
Q ss_pred EEEEcCCCC-------CCC-CCCCcchhhhHHHHHHHHHHHHHhHhc
Q 019009 162 IFNMDGAGS-------GGS-STPLTAVYGSTKCGLRQLQASLFKESK 200 (347)
Q Consensus 162 Iv~vsS~~~-------~~~-~~~~~~~Y~asKaal~~~~~~La~el~ 200 (347)
||++|.... ... ++|..-.|+.++.--..+...+++.+.
T Consensus 129 ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg 175 (329)
T 1b8p_A 129 VLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG 175 (329)
T ss_dssp EEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred EEEccCchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence 999876310 122 344444588877666677777887764
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=8.9e-06 Score=75.32 Aligned_cols=105 Identities=13% Similarity=0.258 Sum_probs=70.9
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|+++||+||++|||.++++.+...|++|+++++++++++.+ +++ +.. ...|.
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------ga~---~~~~~ 200 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY--------------------GAE---YLINA 200 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCS---EEEET
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc--------------------CCc---EEEeC
Confidence 446789999999999999999999999999999999998877533 221 222 12355
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
.+.+..+.+.+.. . ..++|++|+|+|.. ..+.+++.++ .+|++|.++.
T Consensus 201 ~~~~~~~~~~~~~-~-~~g~D~vid~~g~~---------------------------~~~~~~~~l~---~~G~iv~~G~ 248 (334)
T 3qwb_A 201 SKEDILRQVLKFT-N-GKGVDASFDSVGKD---------------------------TFEISLAALK---RKGVFVSFGN 248 (334)
T ss_dssp TTSCHHHHHHHHT-T-TSCEEEEEECCGGG---------------------------GHHHHHHHEE---EEEEEEECCC
T ss_pred CCchHHHHHHHHh-C-CCCceEEEECCChH---------------------------HHHHHHHHhc---cCCEEEEEcC
Confidence 5543333332221 1 13699999999841 1234555664 3689999975
Q ss_pred C
Q 019009 168 A 168 (347)
Q Consensus 168 ~ 168 (347)
.
T Consensus 249 ~ 249 (334)
T 3qwb_A 249 A 249 (334)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=3.2e-05 Score=70.90 Aligned_cols=81 Identities=16% Similarity=0.153 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
.+|+++|+|+ ||+|++++..|++.|+ +|++++|+ .++++++.+++... .+..+.. .+
T Consensus 147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~----------------~~~~v~~--~~ 207 (312)
T 3t4e_A 147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN----------------TDCVVTV--TD 207 (312)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH----------------SSCEEEE--EE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc----------------cCcceEE--ec
Confidence 4799999998 7999999999999998 89999999 88888887777653 1223333 34
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
..+.+...+.+. ..|+|||+....
T Consensus 208 ~~~l~~~~~~l~-------~~DiIINaTp~G 231 (312)
T 3t4e_A 208 LADQHAFTEALA-------SADILTNGTKVG 231 (312)
T ss_dssp TTCHHHHHHHHH-------HCSEEEECSSTT
T ss_pred hHhhhhhHhhcc-------CceEEEECCcCC
Confidence 555433233222 469999987654
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=5.9e-06 Score=76.28 Aligned_cols=83 Identities=11% Similarity=0.046 Sum_probs=58.1
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|+++||+||++|||.++++.+...|++|+++++++++++.+. ++ +.. ...|.
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~--------------------Ga~---~~~~~ 192 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL--------------------GAW---ETIDY 192 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEET
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCC---EEEeC
Confidence 3456899999999999999999999999999999999988876442 22 111 12355
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.+..+.+.+.. . ..++|++|+|+|.
T Consensus 193 ~~~~~~~~~~~~~-~-~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 193 SHEDVAKRVLELT-D-GKKCPVVYDGVGQ 219 (325)
T ss_dssp TTSCHHHHHHHHT-T-TCCEEEEEESSCG
T ss_pred CCccHHHHHHHHh-C-CCCceEEEECCCh
Confidence 5544333333221 1 1269999999984
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=2.7e-05 Score=70.14 Aligned_cols=45 Identities=13% Similarity=0.154 Sum_probs=40.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~ 162 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERF 162 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence 4689999998 79999999999999999999999999888777665
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.2e-05 Score=75.56 Aligned_cols=38 Identities=18% Similarity=0.117 Sum_probs=34.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---hHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS---ESVR 50 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~---~~l~ 50 (347)
|++|+|+|| +|||.++++.+...|++|+++++++ ++++
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 221 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT 221 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence 799999999 9999999999999999999999998 6653
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-05 Score=74.74 Aligned_cols=83 Identities=13% Similarity=0.096 Sum_probs=57.8
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
....|+++||+||++|||.++++.+...|++|+++++++++++.+.+ + +... ..|.
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l--------------------ga~~---~~~~ 196 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L--------------------GAAY---VIDT 196 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H--------------------TCSE---EEET
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C--------------------CCcE---EEeC
Confidence 34568999999999999999999998999999999999988754432 2 1121 2355
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.+..+.+.+ ... ..++|++|+|+|.
T Consensus 197 ~~~~~~~~~~~-~~~-~~g~Dvvid~~g~ 223 (340)
T 3gms_A 197 STAPLYETVME-LTN-GIGADAAIDSIGG 223 (340)
T ss_dssp TTSCHHHHHHH-HTT-TSCEEEEEESSCH
T ss_pred CcccHHHHHHH-HhC-CCCCcEEEECCCC
Confidence 55433333322 211 1369999999984
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00015 Score=66.95 Aligned_cols=115 Identities=13% Similarity=0.106 Sum_probs=71.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+||||+|.+|..++..|+.+| .+|++.+++++ +....++.... ...++.. +.+.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~---------------~~~~v~~----~~~t 67 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD---------------TGAVVRG----FLGQ 67 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC---------------SSCEEEE----EESH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc---------------ccceEEE----EeCC
Confidence 579999999999999999999999 78999998876 22333443210 0012222 2233
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++..+.+ .+.|++|++||... .+- .+. ...+.+|+.+...+.+.+..+- ..+.|+++|
T Consensus 68 ~d~~~al-------~gaDvVi~~ag~~~--~~g--~~r---~dl~~~N~~~~~~i~~~i~~~~----p~~~viv~S 125 (326)
T 1smk_A 68 QQLEAAL-------TGMDLIIVPAGVPR--KPG--MTR---DDLFKINAGIVKTLCEGIAKCC----PRAIVNLIS 125 (326)
T ss_dssp HHHHHHH-------TTCSEEEECCCCCC--CSS--CCC---SHHHHHHHHHHHHHHHHHHHHC----TTSEEEECC
T ss_pred CCHHHHc-------CCCCEEEEcCCcCC--CCC--CCH---HHHHHHHHHHHHHHHHHHHhhC----CCeEEEEEC
Confidence 4444433 37899999999754 211 111 2347788877777777665542 244555543
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.90 E-value=3.4e-05 Score=71.69 Aligned_cols=45 Identities=11% Similarity=0.140 Sum_probs=39.7
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
....|+++||+||++|||.++++.+...|++|+++++++++++.+
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 200 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV 200 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 345689999999999999999999999999999999999887543
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=2.9e-05 Score=73.28 Aligned_cols=103 Identities=13% Similarity=0.093 Sum_probs=69.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+ +..+ .+|..+.
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~--------------------g~~~---~~~~~~~ 222 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF--------------------CGRI---HTRYSSA 222 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--------------------TTSS---EEEECCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc--------------------CCee---EeccCCH
Confidence 4799999998 99999999999999999999999998776543322 1222 1234455
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+++.+++. ..|++|++++... . +.. ..+.+..++.|+ +++.||++++
T Consensus 223 ~~l~~~l~-------~aDvVi~~~~~p~--~---~t~---------------~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 223 YELEGAVK-------RADLVIGAVLVPG--A---KAP---------------KLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHHHH-------HCSEEEECCCCTT--S---CCC---------------CCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHHHHc-------CCCEEEECCCcCC--C---CCc---------------ceecHHHHhcCC---CCcEEEEEec
Confidence 55555442 5799999998643 1 110 112344556664 4688999974
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.88 E-value=5.6e-05 Score=73.10 Aligned_cols=88 Identities=16% Similarity=0.148 Sum_probs=63.3
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE--ec
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI--AC 85 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 85 (347)
....|++|+|+||+++||...++.+...|++|+++++++++++.+ +++ +.....- ..
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l--------------------Ga~~vi~~~~~ 283 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM--------------------GAEAIIDRNAE 283 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH--------------------TCCEEEETTTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh--------------------CCcEEEecCcC
Confidence 456789999999999999999999999999999999988877644 222 1111111 11
Q ss_pred C--------CCCHHHHHHHHHHHHhhcC--CccEEEEcCCC
Q 019009 86 D--------VCEPADVQKLSNFAVNEFG--SIDIWINNAGT 116 (347)
Q Consensus 86 D--------ls~~~~v~~~~~~i~~~~g--~iD~li~nAG~ 116 (347)
| ..+.++++++.+.+.+..+ ++|++|.++|.
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~ 324 (456)
T 3krt_A 284 GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR 324 (456)
T ss_dssp TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence 1 2456677777777766543 79999999973
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.88 E-value=9.9e-05 Score=58.58 Aligned_cols=75 Identities=15% Similarity=0.198 Sum_probs=55.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++++|+|+ |.+|..+++.|.+.|++|++++|++++.+...++ . .+..+..|.++.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~--------------------~--~~~~~~~d~~~~~ 60 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE--------------------I--DALVINGDCTKIK 60 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------------------C--SSEEEESCTTSHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh--------------------c--CcEEEEcCCCCHH
Confidence 357899987 9999999999999999999999998765443211 1 2345678888876
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
.+.+. ...+.|++|.+.+
T Consensus 61 ~l~~~------~~~~~d~vi~~~~ 78 (140)
T 1lss_A 61 TLEDA------GIEDADMYIAVTG 78 (140)
T ss_dssp HHHHT------TTTTCSEEEECCS
T ss_pred HHHHc------CcccCCEEEEeeC
Confidence 64331 1246899999874
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=5.7e-05 Score=70.84 Aligned_cols=98 Identities=15% Similarity=0.101 Sum_probs=68.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.|++++|+|+ +|||...++.+...|++|+++++++++++.+.++ .+.. ...|..+.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~--------------------lGa~---~v~~~~~~ 242 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN--------------------FGAD---SFLVSRDQ 242 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT--------------------SCCS---EEEETTCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------------------cCCc---eEEeccCH
Confidence 6789999996 9999999999999999999999998887554322 2222 12355665
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.+++ ..+++|++|+++|... .++..++.|+ .+|+||++++.
T Consensus 243 ~~~~~-------~~~~~D~vid~~g~~~--------------------------~~~~~~~~l~---~~G~iv~~g~~ 284 (366)
T 1yqd_A 243 EQMQA-------AAGTLDGIIDTVSAVH--------------------------PLLPLFGLLK---SHGKLILVGAP 284 (366)
T ss_dssp HHHHH-------TTTCEEEEEECCSSCC--------------------------CSHHHHHHEE---EEEEEEECCCC
T ss_pred HHHHH-------hhCCCCEEEECCCcHH--------------------------HHHHHHHHHh---cCCEEEEEccC
Confidence 43332 2257999999998531 1234455664 36899999764
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.83 E-value=5.6e-05 Score=70.36 Aligned_cols=79 Identities=14% Similarity=0.133 Sum_probs=55.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++++|+||++|||.+.++.+...|++|+++++++++++.+. ++ +... ..|..+.+
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~--------------------Ga~~---~~~~~~~~ 220 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI--------------------GAAH---VLNEKAPD 220 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH--------------------TCSE---EEETTSTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCCE---EEECCcHH
Confidence 489999999999999999999999999999999998876442 22 1121 23444433
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
-.+.+.+ +... .++|++|+|+|.
T Consensus 221 ~~~~v~~-~~~~-~g~D~vid~~g~ 243 (349)
T 3pi7_A 221 FEATLRE-VMKA-EQPRIFLDAVTG 243 (349)
T ss_dssp HHHHHHH-HHHH-HCCCEEEESSCH
T ss_pred HHHHHHH-HhcC-CCCcEEEECCCC
Confidence 3333332 2221 279999999984
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.81 E-value=8.3e-05 Score=68.93 Aligned_cols=102 Identities=16% Similarity=0.101 Sum_probs=69.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|+++||+|| +|||.++++.+...|++|++++|++++++.+. + .+.. ..+|..
T Consensus 162 ~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~--------------------lGa~---~~~d~~ 216 (339)
T 1rjw_A 162 AKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E--------------------LGAD---LVVNPL 216 (339)
T ss_dssp CCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H--------------------TTCS---EEECTT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H--------------------CCCC---EEecCC
Confidence 356799999999 88999999999999999999999988775432 2 1222 124666
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.+-.+. +.++. +++|++|+++|.. + ..+..++.++ .+|+++.+++.
T Consensus 217 ~~~~~~~-~~~~~---~~~d~vid~~g~~-----------~---------------~~~~~~~~l~---~~G~~v~~g~~ 263 (339)
T 1rjw_A 217 KEDAAKF-MKEKV---GGVHAAVVTAVSK-----------P---------------AFQSAYNSIR---RGGACVLVGLP 263 (339)
T ss_dssp TSCHHHH-HHHHH---SSEEEEEESSCCH-----------H---------------HHHHHHHHEE---EEEEEEECCCC
T ss_pred CccHHHH-HHHHh---CCCCEEEECCCCH-----------H---------------HHHHHHHHhh---cCCEEEEeccc
Confidence 5432222 22222 5799999999841 0 2345566665 36899998754
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=6.1e-05 Score=70.52 Aligned_cols=44 Identities=14% Similarity=0.030 Sum_probs=38.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...|+++||+||++|||.++++.+...|++|++++|++++++.+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 204 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL 204 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 45689999999999999999999999999999999998776543
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.78 E-value=4e-05 Score=69.88 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=39.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~ 185 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG 185 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 4689999998 7999999999999998 9999999998877665543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.76 E-value=8.1e-05 Score=69.78 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=37.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT 54 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~ 54 (347)
+++++|+|+ ||+|+++++.+...|++|++++|++++++.+.+
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~ 208 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLET 208 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 489999999 999999999999999999999999988766543
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00014 Score=59.14 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=56.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+.++|.|+ |.+|+.+++.|.+.|++|+++++++ ++.+...+.. ...+.++..|.++++
T Consensus 4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~--------------------~~~~~~i~gd~~~~~ 62 (153)
T 1id1_A 4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL--------------------GDNADVIPGDSNDSS 62 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--------------------CTTCEEEESCTTSHH
T ss_pred CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh--------------------cCCCeEEEcCCCCHH
Confidence 67889986 8999999999999999999999984 4443332221 123667889999988
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
.++++ ...+.|.+|.+.+
T Consensus 63 ~l~~a------~i~~ad~vi~~~~ 80 (153)
T 1id1_A 63 VLKKA------GIDRCRAILALSD 80 (153)
T ss_dssp HHHHH------TTTTCSEEEECSS
T ss_pred HHHHc------ChhhCCEEEEecC
Confidence 76554 1236799988764
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00053 Score=62.87 Aligned_cols=150 Identities=13% Similarity=0.112 Sum_probs=88.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC--ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASR--SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R--~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+++||||+|.+|..++..|+.+|. ++++.++ ++++++....++....+- .+..+ ++++
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~-------------~~~~~-----~i~~ 63 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAG-------------TRSDA-----NIYV 63 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTT-------------SCCCC-----EEEE
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHh-------------cCCCe-----EEEe
Confidence 589999999999999999998884 6899998 776666555556542110 11111 2221
Q ss_pred HH-HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 90 PA-DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 90 ~~-~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
.+ ++.+ .+.+.|++|+.||... .+ ..+. ...+..|+.+...+.+++..+ . .+.|+++|..
T Consensus 64 ~~d~l~~-------al~gaD~Vi~~Ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~----~-~~~vlv~SNP 124 (313)
T 1hye_A 64 ESDENLR-------IIDESDVVIITSGVPR--KE--GMSR---MDLAKTNAKIVGKYAKKIAEI----C-DTKIFVITNP 124 (313)
T ss_dssp EETTCGG-------GGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHH----C-CCEEEECSSS
T ss_pred CCcchHH-------HhCCCCEEEECCCCCC--CC--CCcH---HHHHHHHHHHHHHHHHHHHHh----C-CeEEEEecCc
Confidence 11 1111 2347899999999754 21 2232 345888888777777776654 2 3455555432
Q ss_pred CC-------CCCCCCCcchhhh-HHHHHHHHHHHHHhHhc
Q 019009 169 GS-------GGSSTPLTAVYGS-TKCGLRQLQASLFKESK 200 (347)
Q Consensus 169 ~~-------~~~~~~~~~~Y~a-sKaal~~~~~~La~el~ 200 (347)
.. -..+.|..-.++. +..-...+...+++.+.
T Consensus 125 v~~~t~~~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg 164 (313)
T 1hye_A 125 VDVMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG 164 (313)
T ss_dssp HHHHHHHHHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence 10 0112333344555 44445556666666653
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00015 Score=67.36 Aligned_cols=41 Identities=17% Similarity=0.011 Sum_probs=36.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
.|++++|+|+ ++||...++.+...|+ +|++++|++++++.+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~ 208 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA 208 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 6789999999 9999999999999999 999999998876543
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00011 Score=68.33 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=37.1
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
....|+++||+||+++||.+.++.+...|++|+++ +++++++.
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~ 189 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY 189 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH
Confidence 34568999999999999999999999999999999 77776543
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00026 Score=65.91 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=36.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
...|++|||+|+ +++|...++.+...|++|+++++++++++.
T Consensus 166 ~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 207 (352)
T 1e3j_A 166 VQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV 207 (352)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 356899999997 899999999888899999999999887654
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.66 E-value=8.1e-05 Score=67.76 Aligned_cols=44 Identities=18% Similarity=0.141 Sum_probs=39.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...|++++|+||++|+|.++++.+...|++|++++|++++++.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 166 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 166 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45689999999999999999999999999999999998876543
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0002 Score=64.59 Aligned_cols=46 Identities=9% Similarity=0.113 Sum_probs=41.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELE 57 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~ 57 (347)
.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++.
T Consensus 125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~ 171 (281)
T 3o8q_A 125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA 171 (281)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHG
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhh
Confidence 4799999998 6999999999999996 99999999999888877764
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00018 Score=67.47 Aligned_cols=71 Identities=10% Similarity=0.128 Sum_probs=56.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
.+|+|.|| |++|+.+|+.|++ .++|.+++|+.++++++. ..+..+.+|++|.++
T Consensus 17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~------------------------~~~~~~~~d~~d~~~ 70 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK------------------------EFATPLKVDASNFDK 70 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT------------------------TTSEEEECCTTCHHH
T ss_pred cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh------------------------ccCCcEEEecCCHHH
Confidence 35888898 9999999999875 479999999988765431 234567899999998
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+.++++ +.|+|||+++.
T Consensus 71 l~~~~~-------~~DvVi~~~p~ 87 (365)
T 3abi_A 71 LVEVMK-------EFELVIGALPG 87 (365)
T ss_dssp HHHHHT-------TCSEEEECCCG
T ss_pred HHHHHh-------CCCEEEEecCC
Confidence 888764 57999998864
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00011 Score=67.15 Aligned_cols=36 Identities=25% Similarity=0.269 Sum_probs=30.9
Q ss_pred CCCe-EEEEcCCC-----------------h-HHHHHHHHHHHCCCeEEEEeCCh
Q 019009 11 CTCR-WFSVVSTR-----------------G-LGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 11 ~~k~-vlITGas~-----------------G-IG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.||+ ||||+|.. | +|.++|+.++++|+.|++++|..
T Consensus 35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4566 99998765 6 99999999999999999998853
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0012 Score=60.13 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=71.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC--ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASR--SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R--~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+++||||+|.+|..++..|+..|. ++++.++ ++++++....++..... ....+.... | +
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~--------------~~~~~~v~~-~--~ 64 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--------------YDSNTRVRQ-G--G 64 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--------------TTCCCEEEE-C--C
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh--------------hCCCcEEEe-C--C
Confidence 689999999999999999999885 6999999 87776655556654311 011222222 2 2
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.+. +.+.|++|+.||... .+ ..+.+ ..+..|+.....+.+++ .+....+.|+++|
T Consensus 65 ~~a-----------~~~aDvVi~~ag~~~--~~--g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~S 119 (303)
T 1o6z_A 65 YED-----------TAGSDVVVITAGIPR--QP--GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTS 119 (303)
T ss_dssp GGG-----------GTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECC
T ss_pred HHH-----------hCCCCEEEEcCCCCC--CC--CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeC
Confidence 111 236899999999754 22 22333 34777777665555554 4443345555553
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0002 Score=66.55 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=38.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.|+++||+||+++||.+.++.+...|++|+++++++++++.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 191 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT 191 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999999998876543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00037 Score=61.73 Aligned_cols=80 Identities=16% Similarity=0.178 Sum_probs=60.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
+++|+|.|+ ||+|.++++.|++.|. +|++++++. .+.+.+.+.+.+.++
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------- 99 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP---------- 99 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC----------
Confidence 478999997 6999999999999997 899999997 788888788776432
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
..++..+..++++ +.+.+++ ...|++|.+..
T Consensus 100 -----~~~v~~~~~~~~~-~~~~~~~-------~~~DvVi~~~d 130 (249)
T 1jw9_B 100 -----HIAITPVNALLDD-AELAALI-------AEHDLVLDCTD 130 (249)
T ss_dssp -----TSEEEEECSCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred -----CcEEEEEeccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence 2456667766763 3444333 26899998763
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00018 Score=58.69 Aligned_cols=76 Identities=14% Similarity=0.062 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++++|.|+ |.+|..+++.|.+.|++|++++|++++++.+.+ ......+..|.++.
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------------------~~g~~~~~~d~~~~ 74 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------------------EFSGFTVVGDAAEF 74 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------------------TCCSEEEESCTTSH
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------------------cCCCcEEEecCCCH
Confidence 4578999996 899999999999999999999999886532110 11234566788876
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
+.+.+. ...+.|++|.+.+
T Consensus 75 ~~l~~~------~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 75 ETLKEC------GMEKADMVFAFTN 93 (155)
T ss_dssp HHHHTT------TGGGCSEEEECSS
T ss_pred HHHHHc------CcccCCEEEEEeC
Confidence 544321 1236899999875
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00025 Score=65.75 Aligned_cols=39 Identities=13% Similarity=0.053 Sum_probs=35.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVR 50 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~ 50 (347)
.|+++||+|| +|+|...++.+...|+ +|+.+++++++++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~ 203 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA 203 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 6789999999 9999999998888999 9999999987654
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.51 E-value=7.2e-05 Score=60.34 Aligned_cols=44 Identities=23% Similarity=0.207 Sum_probs=38.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l 56 (347)
+++++|.|+ |++|+++++.|.+.|++|++++|++++.++..+++
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~ 64 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY 64 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence 789999996 99999999999999999999999999877655543
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00054 Score=54.84 Aligned_cols=74 Identities=18% Similarity=0.081 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.++++|.|+ |.+|..+|+.|.+.|++|+++++++++.+.+. + ..+..+..|.++++
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~-------------------~g~~~i~gd~~~~~ 62 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----E-------------------RGVRAVLGNAANEE 62 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H-------------------TTCEEEESCTTSHH
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----H-------------------cCCCEEECCCCCHH
Confidence 357899997 78999999999999999999999998765432 2 13456889999988
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
.++++ ...+.|++|.+.+
T Consensus 63 ~l~~a------~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 63 IMQLA------HLECAKWLILTIP 80 (140)
T ss_dssp HHHHT------TGGGCSEEEECCS
T ss_pred HHHhc------CcccCCEEEEECC
Confidence 76553 1135789888764
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00039 Score=65.27 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=34.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
...|++++|+||++|||...++.+...|++|++++ ++++++
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~ 221 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASE 221 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHH
Confidence 45689999999999999999999889999999988 455543
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0037 Score=57.50 Aligned_cols=117 Identities=18% Similarity=0.112 Sum_probs=76.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+++.|+|+ |.+|.++|..|+..|. +|++.++++++++....+|....+- .+..+.....|
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~-------------~~~~v~i~~~~--- 67 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAF-------------APQPVKTSYGT--- 67 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------SSSCCEEEEEC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcccc-------------ccCCeEEEeCc---
Confidence 467999996 9999999999999986 8999999999988888788764221 11122222222
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
. +.+...|++|..||... .+ ..+. ...++.|.. +++.+.+.+.+....+.|+++|-
T Consensus 68 ~-----------~a~~~aDvVvi~ag~p~--kp--G~~R---~dL~~~N~~----Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 68 Y-----------EDCKDADIVCICAGANQ--KP--GETR---LELVEKNLK----IFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp G-----------GGGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHH----HHHHHHHHHHHTTCCSEEEECSS
T ss_pred H-----------HHhCCCCEEEEecccCC--CC--CccH---HHHHHHHHH----HHHHHHHHHHHhcCCeEEEEcCC
Confidence 1 12246899999999753 22 2232 234555654 34555555555545677888763
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00076 Score=62.91 Aligned_cols=85 Identities=8% Similarity=-0.033 Sum_probs=59.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
...|++|||+|+ +++|...++.+...|++ |+++++++++++.+. ++ . ..+..+..|-
T Consensus 177 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~-------------------~~~~~~~~~~ 234 (363)
T 3m6i_A 177 VRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C-------------------PEVVTHKVER 234 (363)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C-------------------TTCEEEECCS
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c-------------------hhcccccccc
Confidence 356899999998 99999999988889997 999999988875433 32 1 1344445555
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.+++.+.+.+... -.++|++|.++|.
T Consensus 235 ~~~~~~~~~v~~~t~-g~g~Dvvid~~g~ 262 (363)
T 3m6i_A 235 LSAEESAKKIVESFG-GIEPAVALECTGV 262 (363)
T ss_dssp CCHHHHHHHHHHHTS-SCCCSEEEECSCC
T ss_pred cchHHHHHHHHHHhC-CCCCCEEEECCCC
Confidence 555555444433321 1369999999984
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00053 Score=63.59 Aligned_cols=119 Identities=8% Similarity=0.040 Sum_probs=72.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
|..+++|.|+|++|.+|..+|..++.+| .+|+++++++++++....++..... ...++.+ .
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--------------~~~~i~~-t-- 67 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--------------EGLNLTF-T-- 67 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--------------TTCCCEE-E--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--------------CCCceEE-c--
Confidence 3345789999999999999999999999 4899999999988877777765210 0111211 1
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE-EEEE
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH-IFNM 165 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~-Iv~v 165 (347)
+| ..+.+ ...|++|.+||... .+ ..+ -...++.|..- ++.+.+.+.+....+. |+++
T Consensus 68 -~d---~~~al-------~dADvVvitaG~p~--kp--G~~---R~dLl~~N~~I----~~~i~~~i~~~~p~a~~vlvv 125 (343)
T 3fi9_A 68 -SD---IKEAL-------TDAKYIVSSGGAPR--KE--GMT---REDLLKGNAEI----AAQLGKDIKSYCPDCKHVIII 125 (343)
T ss_dssp -SC---HHHHH-------TTEEEEEECCC-----------C---HHHHHHHHHHH----HHHHHHHHHHHCTTCCEEEEC
T ss_pred -CC---HHHHh-------CCCCEEEEccCCCC--CC--CCC---HHHHHHHHHHH----HHHHHHHHHHhccCcEEEEEe
Confidence 12 22222 36899999999753 21 122 23455666544 4455555554434564 6676
Q ss_pred c
Q 019009 166 D 166 (347)
Q Consensus 166 s 166 (347)
|
T Consensus 126 s 126 (343)
T 3fi9_A 126 F 126 (343)
T ss_dssp S
T ss_pred c
Confidence 5
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0017 Score=58.00 Aligned_cols=41 Identities=29% Similarity=0.217 Sum_probs=38.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV 53 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~ 53 (347)
+|+++|.|+ ||.|++++..|++.|.+|++++|+.++.+++.
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la 158 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ 158 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 799999997 89999999999999999999999999887766
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00062 Score=63.63 Aligned_cols=43 Identities=23% Similarity=0.138 Sum_probs=38.0
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
....|+++||+| +++||.+.++.+...|++|+++++++++++.
T Consensus 186 ~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 228 (363)
T 3uog_A 186 HLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR 228 (363)
T ss_dssp CCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH
Confidence 345689999999 8899999999998999999999999887764
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00037 Score=58.39 Aligned_cols=75 Identities=11% Similarity=0.097 Sum_probs=55.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+++++|.|+ |.+|..+|+.|.+. |++|++++|++++.+.+ .+ . .+..+..|.++.
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~-----------------~--g~~~~~gd~~~~ 94 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH----RS-----------------E--GRNVISGDATDP 94 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HH-----------------T--TCCEEECCTTCH
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HH-----------------C--CCCEEEcCCCCH
Confidence 467889985 89999999999999 99999999998876543 22 1 244567899887
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
+.+.++ ....+.|++|.+.+
T Consensus 95 ~~l~~~-----~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 95 DFWERI-----LDTGHVKLVLLAMP 114 (183)
T ss_dssp HHHHTB-----CSCCCCCEEEECCS
T ss_pred HHHHhc-----cCCCCCCEEEEeCC
Confidence 654432 01246899998764
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00023 Score=65.49 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=36.5
Q ss_pred CCC-eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTC-RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k-~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.|+ +++|+||++|+|...++.+...|++|+++++++++++.+
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~ 190 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL 190 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 444 799999999999999999889999999999998876543
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00042 Score=62.25 Aligned_cols=45 Identities=22% Similarity=0.233 Sum_probs=40.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~ 164 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNEL 164 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHH
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence 4799999998 6999999999999996 9999999999988877665
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0018 Score=58.65 Aligned_cols=87 Identities=13% Similarity=0.083 Sum_probs=66.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh------------------hHHHHHHHHHHHHhhhhhhhcCCCCc
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS------------------ESVRMTVTELEENLKEGMMAAGGSSK 72 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~------------------~~l~~~~~~l~~~~~~~~~~~~~~~~ 72 (347)
.++|+|.|+ +|+|.++++.|++.|. ++.+++.+. .|.+.+.+.+++.++
T Consensus 36 ~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP----------- 103 (292)
T 3h8v_A 36 TFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP----------- 103 (292)
T ss_dssp GCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT-----------
T ss_pred CCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC-----------
Confidence 378999987 5999999999999995 899999876 567777777776543
Q ss_pred ccccCceeeEEecCCCCHHHHHHHHHHHHhh----cCCccEEEEcC
Q 019009 73 KNLVHAKVAGIACDVCEPADVQKLSNFAVNE----FGSIDIWINNA 114 (347)
Q Consensus 73 ~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~----~g~iD~li~nA 114 (347)
..++..+..++++.+.+..+++.+... ....|+||.+.
T Consensus 104 ----~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~ 145 (292)
T 3h8v_A 104 ----DVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV 145 (292)
T ss_dssp ----TSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred ----CcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence 357888888898877777776654321 13689999765
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00088 Score=61.87 Aligned_cols=79 Identities=16% Similarity=0.087 Sum_probs=55.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|+++||+|+ +++|...++.+...|++|+.+++++++++.+ ++ .+... ..|..
T Consensus 164 ~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~--------------------lGa~~---~i~~~ 218 (340)
T 3s2e_A 164 TRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RR--------------------LGAEV---AVNAR 218 (340)
T ss_dssp CCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH--------------------TTCSE---EEETT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HH--------------------cCCCE---EEeCC
Confidence 456899999997 8999999998889999999999999877643 22 12221 23444
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+.+..+.+.+ ..+++|++|.++|.
T Consensus 219 ~~~~~~~~~~----~~g~~d~vid~~g~ 242 (340)
T 3s2e_A 219 DTDPAAWLQK----EIGGAHGVLVTAVS 242 (340)
T ss_dssp TSCHHHHHHH----HHSSEEEEEESSCC
T ss_pred CcCHHHHHHH----hCCCCCEEEEeCCC
Confidence 4333333322 33689999999873
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00058 Score=63.72 Aligned_cols=42 Identities=12% Similarity=0.006 Sum_probs=35.9
Q ss_pred cccCC-CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHH
Q 019009 8 HWSCT-CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESV 49 (347)
Q Consensus 8 ~~~~~-k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l 49 (347)
....| .+|||+||++++|...++.+...|++|++++++.+++
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~ 205 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL 205 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCcccc
Confidence 34567 9999999999999999888888999999998877653
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0027 Score=58.42 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=69.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
++++.|+|+ |++|.++|..|+..|. +|++.++++++++....++....+- . ..+.... | +
T Consensus 9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-------------~-~~~~i~~-~--~ 70 (326)
T 3vku_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPF-------------T-SPKKIYS-A--E 70 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGG-------------S-CCCEEEE-C--C
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhh-------------c-CCcEEEE-C--c
Confidence 468999996 8999999999999886 8999999999888777777653210 0 1222222 1 1
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
. +.+...|++|+.||... .+ ..+ -...++.|. .+.+.+.+.+.+....+.|+++|
T Consensus 71 ~-----------~a~~~aDiVvi~ag~~~--kp--G~t---R~dL~~~N~----~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 71 Y-----------SDAKDADLVVITAGAPQ--KP--GET---RLDLVNKNL----KILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp G-----------GGGTTCSEEEECCCCC---------------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred H-----------HHhcCCCEEEECCCCCC--CC--Cch---HHHHHHHHH----HHHHHHHHHHHhcCCceEEEEcc
Confidence 1 22346899999999753 21 111 233455554 34455666666655567787775
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.003 Score=58.70 Aligned_cols=42 Identities=14% Similarity=0.049 Sum_probs=36.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
...|.+|||+|+ +++|...++.+...|+ +|+++++++++++.
T Consensus 169 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 211 (356)
T 1pl8_A 169 VTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 211 (356)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 356899999996 8999999988888999 89999999887654
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0011 Score=62.19 Aligned_cols=82 Identities=11% Similarity=0.103 Sum_probs=55.7
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
....|++|||+|+ +++|...++.+...|+ +|+++++++++++.+. + .+... ..|
T Consensus 189 ~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~--------------------lGa~~---vi~ 243 (374)
T 1cdo_A 189 KVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V--------------------FGATD---FVN 243 (374)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H--------------------TTCCE---EEC
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H--------------------hCCce---EEe
Confidence 3456899999996 8999999998888999 8999999998876432 2 12221 134
Q ss_pred CCC-HHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 87 VCE-PADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 87 ls~-~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
..+ .+++.+.+.++.. +++|++|+++|.
T Consensus 244 ~~~~~~~~~~~~~~~~~--~g~D~vid~~g~ 272 (374)
T 1cdo_A 244 PNDHSEPISQVLSKMTN--GGVDFSLECVGN 272 (374)
T ss_dssp GGGCSSCHHHHHHHHHT--SCBSEEEECSCC
T ss_pred ccccchhHHHHHHHHhC--CCCCEEEECCCC
Confidence 432 1234443433333 479999999974
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0009 Score=57.72 Aligned_cols=73 Identities=16% Similarity=0.084 Sum_probs=56.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+++|.|+ |.+|..+|+.|.++|++|+++++++++.++..++ ....++..|.++.+.+
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----------------------~~~~~i~gd~~~~~~l 58 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----------------------LKATIIHGDGSHKEIL 58 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----------------------SSSEEEESCTTSHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----------------------cCCeEEEcCCCCHHHH
Confidence 5889997 8899999999999999999999999876544322 1355788999998776
Q ss_pred HHHHHHHHhhcCCccEEEEcCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG 115 (347)
+++ ...+.|++|.+.+
T Consensus 59 ~~a------~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 59 RDA------EVSKNDVVVILTP 74 (218)
T ss_dssp HHH------TCCTTCEEEECCS
T ss_pred Hhc------CcccCCEEEEecC
Confidence 654 1246799987664
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00092 Score=63.49 Aligned_cols=44 Identities=23% Similarity=0.256 Sum_probs=38.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~ 55 (347)
.|++++|.|+ |+||+.+++.|...|+ +|++++|+.+++++..++
T Consensus 166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~ 210 (404)
T 1gpj_A 166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD 210 (404)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH
T ss_pred cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 5799999998 9999999999999998 999999999887655544
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0014 Score=60.13 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=67.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|.|+||+|.+|..++..|+..| .+|+++++++ .+....++.+.. ...++.... ..+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~---------------~~~~l~~~~----~t~ 60 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE---------------TRATVKGYL----GPE 60 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS---------------SSCEEEEEE----SGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC---------------cCceEEEec----CCC
Confidence 58999999999999999999988 6899999987 333334443210 011222211 012
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+.++.+ .+.|++|+.+|... .+ ..+.. ..+..|......+.+.+.++ ...+.|+++|
T Consensus 61 d~~~a~-------~~aDvVvi~ag~~~--~~--g~~r~---dl~~~n~~i~~~i~~~i~~~----~p~a~viv~s 117 (314)
T 1mld_A 61 QLPDCL-------KGCDVVVIPAGVPR--KP--GMTRD---DLFNTNATIVATLTAACAQH----CPDAMICIIS 117 (314)
T ss_dssp GHHHHH-------TTCSEEEECCSCCC--CT--TCCGG---GGHHHHHHHHHHHHHHHHHH----CTTSEEEECS
T ss_pred CHHHHh-------CCCCEEEECCCcCC--CC--CCcHH---HHHHHHHHHHHHHHHHHHhh----CCCeEEEEEC
Confidence 233322 36899999999864 11 12211 23556655554444444433 3467888875
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0022 Score=60.18 Aligned_cols=43 Identities=14% Similarity=-0.015 Sum_probs=37.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~ 52 (347)
...|++|||+| ++++|...++.+...| ++|+++++++++++.+
T Consensus 193 ~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~ 236 (380)
T 1vj0_A 193 SFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA 236 (380)
T ss_dssp CCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence 44678999999 8999999999888899 5999999998876543
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0012 Score=61.81 Aligned_cols=44 Identities=9% Similarity=0.074 Sum_probs=37.3
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
....|++|||+|+ ++||...++.+...|+ +|+++++++++++.+
T Consensus 188 ~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~ 232 (374)
T 2jhf_A 188 KVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA 232 (374)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 3456899999995 8999999998888999 899999999887543
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0017 Score=60.54 Aligned_cols=44 Identities=14% Similarity=0.090 Sum_probs=37.4
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~ 52 (347)
....|.+|||+|| +++|...++.+... |++|+++++++++++.+
T Consensus 183 ~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~ 227 (359)
T 1h2b_A 183 TLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA 227 (359)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 3456899999999 89999999888788 99999999998876543
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.011 Score=53.45 Aligned_cols=115 Identities=15% Similarity=0.165 Sum_probs=73.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++.|+|+ |.+|.++|..|+..|. +|++.++++++++....++....+... ...++.. .. |.+
T Consensus 2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~-----------~~~~i~~-t~---d~~ 65 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGID-----------KYPKIVG-GA---DYS 65 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTT-----------CCCEEEE-ES---CGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcC-----------CCCEEEE-eC---CHH
Confidence 5789999 9999999999999997 899999999987755555544321100 1112221 11 221
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.+..-|++|..+|... .+ ..+.++ .+..| ..+++.+.+.+.+....+.|+++|
T Consensus 66 -----------a~~~aDiVViaag~~~--kp--G~~R~d---l~~~N----~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 66 -----------LLKGSEIIVVTAGLAR--KP--GMTRLD---LAHKN----AGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp -----------GGTTCSEEEECCCCCC--CS--SCCHHH---HHHHH----HHHHHHHHHHHHTTSTTCEEEECS
T ss_pred -----------HhCCCCEEEECCCCCC--CC--CCcHHH---HHHHH----HHHHHHHHHHHHhhCCCeEEEEeC
Confidence 1236799999999854 22 233333 35555 345666777777665567888876
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0021 Score=60.17 Aligned_cols=40 Identities=13% Similarity=0.036 Sum_probs=34.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
..|++|||+||++++|...++.+...|++|+.+. ++++++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~ 202 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD 202 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence 5679999999999999999999989999999887 566654
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0018 Score=60.73 Aligned_cols=44 Identities=9% Similarity=0.031 Sum_probs=37.2
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
....|.+|||+|+ ++||...++.+...|+ +|+++++++++++.+
T Consensus 192 ~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 236 (376)
T 1e3i_A 192 KVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236 (376)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 3456899999996 8999999998888999 899999999887543
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.017 Score=52.75 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=71.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC--hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~--~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+++.|+|+ |.+|..+|..|+..|. +|++.+++ +++++....++....+-. . ...++.. ..|
T Consensus 8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~--~---------~~~~i~~-t~d-- 72 (315)
T 3tl2_A 8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQ--G---------FDANIIG-TSD-- 72 (315)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHH--T---------CCCCEEE-ESC--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhc--c---------CCCEEEE-cCC--
Confidence 468999997 9999999999999998 99999999 566665555555432100 0 0112221 112
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
. +.+...|++|..+|... .+ ..+. ...++.|..-. +.+.+.+.+....+.|+++|
T Consensus 73 -~-----------~a~~~aDvVIiaag~p~--kp--g~~R---~dl~~~N~~i~----~~i~~~i~~~~p~a~vlvvs 127 (315)
T 3tl2_A 73 -Y-----------ADTADSDVVVITAGIAR--KP--GMSR---DDLVATNSKIM----KSITRDIAKHSPNAIIVVLT 127 (315)
T ss_dssp -G-----------GGGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHH----HHHHHHHHHHCTTCEEEECC
T ss_pred -H-----------HHhCCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCeEEEECC
Confidence 1 12347899999999854 22 2333 33455665443 44444444433567788776
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0015 Score=61.32 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=37.1
Q ss_pred cCCCeEEEEc-CCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVV-STRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITG-as~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
..|.++||.| |++++|...++.+...|++|+.+++++++++.+
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~ 212 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL 212 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 3578899997 999999999998888999999999998876543
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0018 Score=60.57 Aligned_cols=76 Identities=17% Similarity=0.089 Sum_probs=54.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|.+|||+|+ +++|...++.+...|++|+++++++++++.+. ++ +.. ...|..
T Consensus 192 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l--------------------Ga~---~vi~~~ 246 (369)
T 1uuf_A 192 AGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL--------------------GAD---EVVNSR 246 (369)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH--------------------TCS---EEEETT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCc---EEeccc
Confidence 356899999998 89999999988889999999999998876443 22 111 123555
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+.+.+++ +. +++|++|.++|.
T Consensus 247 ~~~~~~~----~~---~g~Dvvid~~g~ 267 (369)
T 1uuf_A 247 NADEMAA----HL---KSFDFILNTVAA 267 (369)
T ss_dssp CHHHHHT----TT---TCEEEEEECCSS
T ss_pred cHHHHHH----hh---cCCCEEEECCCC
Confidence 5443322 21 579999999985
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0015 Score=61.00 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=35.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLL-SGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~-~G~~Vil~~R~~~~l~~~ 52 (347)
.|++|||+||++++|...++.+.. .|++|+++++++++++.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~ 213 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV 213 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence 578999999999999988876655 589999999998876543
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0011 Score=61.33 Aligned_cols=43 Identities=16% Similarity=0.071 Sum_probs=37.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...|.+|||+|+ ++||...++.+...|++|+++++++++++.+
T Consensus 174 ~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 216 (348)
T 3two_A 174 VTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA 216 (348)
T ss_dssp CCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 356899999997 8999999998888999999999999887643
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0016 Score=60.87 Aligned_cols=44 Identities=11% Similarity=0.089 Sum_probs=37.2
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
....|.+|||+|+ +++|...++.+...|+ +|+++++++++++.+
T Consensus 187 ~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~ 231 (373)
T 2fzw_A 187 KLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA 231 (373)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 3456899999996 8999999998888999 799999999887543
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0016 Score=60.19 Aligned_cols=117 Identities=9% Similarity=0.080 Sum_probs=70.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--e-----EEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--R-----VVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~-----Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
.+|+||||+|.||..++..|+..|. + |+++++++ ++++....++.... ...+..+
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~----------------~~~~~~~ 67 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA----------------LPLLKDV 67 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC----------------CTTEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhh----------------hcccCCE
Confidence 5799999999999999999998884 5 99999975 46666666775521 0111111
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCc-EE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG-HI 162 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g-~I 162 (347)
. .++ +. .+.+.+.|++|+.||... .+ ..+ -...++.|.... +.+.+.+.+....+ +|
T Consensus 68 ~--~~~--~~-------~~~~~daDvVvitAg~pr--kp--G~t---R~dll~~N~~i~----~~i~~~i~~~~~~~~~v 125 (333)
T 5mdh_A 68 I--ATD--KE-------EIAFKDLDVAILVGSMPR--RD--GME---RKDLLKANVKIF----KCQGAALDKYAKKSVKV 125 (333)
T ss_dssp E--EES--CH-------HHHTTTCSEEEECCSCCC--CT--TCC---TTTTHHHHHHHH----HHHHHHHHHHSCTTCEE
T ss_pred E--EcC--Cc-------HHHhCCCCEEEEeCCCCC--CC--CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCCeEE
Confidence 1 111 11 112236899999999753 22 112 134566666554 44444454443345 57
Q ss_pred EEEcC
Q 019009 163 FNMDG 167 (347)
Q Consensus 163 v~vsS 167 (347)
+++|-
T Consensus 126 ivvsN 130 (333)
T 5mdh_A 126 IVVGN 130 (333)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 77753
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0037 Score=55.32 Aligned_cols=79 Identities=11% Similarity=0.154 Sum_probs=56.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
+++|+|.|+ ||+|.++++.|+..|. ++.+++++. .|.+.+.+.+++.++
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------- 96 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP---------- 96 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC----------
Confidence 479999998 5799999999999996 788886543 566777777766432
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
..++..+..++++ +.+.++++ ..|+||++.
T Consensus 97 -----~~~v~~~~~~~~~-~~~~~~~~-------~~DvVi~~~ 126 (251)
T 1zud_1 97 -----DIQLTALQQRLTG-EALKDAVA-------RADVVLDCT 126 (251)
T ss_dssp -----TSEEEEECSCCCH-HHHHHHHH-------HCSEEEECC
T ss_pred -----CCEEEEEeccCCH-HHHHHHHh-------cCCEEEECC
Confidence 3456666666653 44444443 479999875
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=96.96 E-value=0.015 Score=53.51 Aligned_cols=118 Identities=9% Similarity=0.042 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+++.|+|+ |++|.++|..|+.+|. +|++.++++++++....++.....- .. ....+.. .
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~-------------~~-~~~i~~~--~ 80 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLF-------------LK-TPKIVSS--K 80 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------CS-CCEEEEC--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhc-------------cC-CCeEEEc--C
Confidence 3578999998 8999999999999996 8999999999888888888763210 00 1111111 1
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
|.+ .+...|++|..||... .| ..+. ...++.|.-- .+.+.+.+.+....+.++++|-
T Consensus 81 d~~-----------~~~~aDiVvi~aG~~~--kp--G~tR---~dL~~~N~~I----~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 81 DYS-----------VTANSKLVIITAGARQ--QE--GESR---LNLVQRNVNI----FKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp SGG-----------GGTTEEEEEECCSCCC--CT--TCCG---GGGHHHHHHH----HHHHHHHHHHHCTTCEEEECSS
T ss_pred CHH-----------HhCCCCEEEEccCCCC--CC--CccH---HHHHHHHHHH----HHHHHHHHHHHCCCeEEEEecC
Confidence 221 1236899999999854 22 2222 2355555543 3444444444335678888763
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0026 Score=60.24 Aligned_cols=43 Identities=12% Similarity=0.041 Sum_probs=37.1
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
....|.+|||+|+ +++|...++.+...|+ +|+++++++++++.
T Consensus 210 ~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 253 (404)
T 3ip1_A 210 GIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL 253 (404)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 3456899999998 8999999988888999 89999999887754
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0035 Score=59.40 Aligned_cols=41 Identities=12% Similarity=-0.063 Sum_probs=36.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+++|+|+|+ |.+|+++++.+...|++|++++|++++++.+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 4689999997 7999999999999999999999999887654
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00099 Score=58.09 Aligned_cols=77 Identities=12% Similarity=-0.055 Sum_probs=55.2
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
..+...+.++|.|+ +.+|+.+++.|.+.|+ |+++++++++.+... ..+.++..|
T Consensus 4 ~~~~~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------------------------~~~~~i~gd 57 (234)
T 2aef_A 4 IDVAKSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR------------------------SGANFVHGD 57 (234)
T ss_dssp ------CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------------------------TTCEEEESC
T ss_pred CCCCCCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------------------------cCCeEEEcC
Confidence 34445578999998 7999999999999999 999999988764332 135678899
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
.++.+.++++ ...+.|.+|.+.+
T Consensus 58 ~~~~~~l~~a------~i~~ad~vi~~~~ 80 (234)
T 2aef_A 58 PTRVSDLEKA------NVRGARAVIVDLE 80 (234)
T ss_dssp TTCHHHHHHT------TCTTCSEEEECCS
T ss_pred CCCHHHHHhc------CcchhcEEEEcCC
Confidence 9998766554 1236788887653
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0011 Score=59.63 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=35.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVR 50 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~ 50 (347)
.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~ 155 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN 155 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence 4689999997 6999999999999998 8999999988654
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0015 Score=61.38 Aligned_cols=43 Identities=14% Similarity=0.019 Sum_probs=37.1
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
....|.+|||+|+ ++||...++.+...|+ +|+++++++++++.
T Consensus 190 ~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~ 233 (378)
T 3uko_A 190 KVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET 233 (378)
T ss_dssp CCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 3456899999998 8999999998888998 89999999988763
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0017 Score=59.98 Aligned_cols=41 Identities=15% Similarity=-0.048 Sum_probs=36.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLS--GDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~~~l~~~ 52 (347)
.|++|||+|+ ++||...++.+... |++|+++++++++++.+
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~ 212 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA 212 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence 6799999999 89999999888888 99999999998876543
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0022 Score=59.99 Aligned_cols=44 Identities=9% Similarity=0.040 Sum_probs=36.9
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
....|++|||+|+ ++||...++.+...|+ +|+++++++++++.+
T Consensus 188 ~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 232 (373)
T 1p0f_A 188 KVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA 232 (373)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence 3456899999996 8999999988888898 899999998887543
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0019 Score=60.49 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=35.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVR 50 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~ 50 (347)
...|++|||+|+ +++|...++.+...|+ +|+++++++++++
T Consensus 180 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 221 (370)
T 4ej6_A 180 IKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR 221 (370)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 356899999998 8999999998888999 8999999988765
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0017 Score=60.50 Aligned_cols=43 Identities=21% Similarity=-0.015 Sum_probs=37.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...|++|||+|+ +++|...++.+...|++|+++++++++++.+
T Consensus 177 ~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~ 219 (360)
T 1piw_A 177 CGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA 219 (360)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 456899999999 9999999998888999999999998887543
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.026 Score=51.80 Aligned_cols=117 Identities=13% Similarity=0.034 Sum_probs=74.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+++.|+|+ |.+|..+|..|+..|. +|++.++++++++....++.....- . ...++. ...|..
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~----------~--~~~~i~-~t~d~~ 85 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLF----------L--HTAKIV-SGKDYS 85 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGG----------S--CCSEEE-EESSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhc----------c--cCCeEE-EcCCHH
Confidence 4578999999 9999999999999996 8999999999888877777663210 0 111221 123332
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ +...|++|..||... .+ ..+. ...+..|. .+.+.+.+.+.+....+.++++|
T Consensus 86 ~--------------~~daDiVIitaG~p~--kp--G~tR---~dll~~N~----~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 86 V--------------SAGSKLVVITAGARQ--QE--GESR---LNLVQRNV----NIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp S--------------CSSCSEEEECCSCCC--CS--SCCT---TGGGHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred H--------------hCCCCEEEEeCCCCC--CC--CCCH---HHHHHhhH----HHHHHHHHHHHhhCCCceEEeCC
Confidence 1 236899999999864 22 1121 12333443 33444555554443567788876
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0025 Score=59.28 Aligned_cols=41 Identities=20% Similarity=0.035 Sum_probs=35.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.|.+++|+|+ ++||...++.+...|++|+++++++++++.+
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~ 220 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEA 220 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence 6789999995 8999999998888999999999998876544
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.018 Score=51.68 Aligned_cols=45 Identities=13% Similarity=0.109 Sum_probs=39.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~ 58 (347)
++|.|.|+ |.+|.++|+.|++.|++|++.+|+++++++..+.+.+
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~ 49 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEG 49 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 67888876 6799999999999999999999999998887776544
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.014 Score=53.58 Aligned_cols=116 Identities=13% Similarity=0.129 Sum_probs=71.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++.|+|+ |.+|.++|..|+..|. +|++.++++++++....++...... .+........ .|.+
T Consensus 6 ~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~-------------~~~~~~v~~t--~d~~ 69 (321)
T 3p7m_A 6 KKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPI-------------EGVDFKVRGT--NDYK 69 (321)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHH-------------HTCCCCEEEE--SCGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhh-------------cCCCcEEEEc--CCHH
Confidence 56888895 8999999999999987 9999999999887666676543210 0011111111 1211
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.+..-|++|+.+|... .+ ..+.. ..+..|.. +.+.+.+.+.+....+.|+++|
T Consensus 70 -----------a~~~aDvVIi~ag~p~--k~--G~~R~---dl~~~N~~----i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 70 -----------DLENSDVVIVTAGVPR--KP--GMSRD---DLLGINIK----VMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp -----------GGTTCSEEEECCSCCC--CT--TCCHH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECC
T ss_pred -----------HHCCCCEEEEcCCcCC--CC--CCCHH---HHHHHhHH----HHHHHHHHHHHHCCCcEEEEec
Confidence 2236799999999754 22 23333 34455544 4455555555443467777775
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.023 Score=52.06 Aligned_cols=116 Identities=20% Similarity=0.212 Sum_probs=71.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++.|+|+ |.+|.++|..|+..|. +|++.++++++++....++.....-. + ...++.. ..| .+
T Consensus 8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~----~-------~~~~v~~-t~d---~~ 71 (324)
T 3gvi_A 8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVD----G-------FDAKFTG-AND---YA 71 (324)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHH----T-------CCCCEEE-ESS---GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhc----C-------CCCEEEE-eCC---HH
Confidence 57899998 9999999999999998 99999999998876666666532100 0 0112221 122 11
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.+..-|++|+.+|... .+ ..+. ...+..|. .+.+.+.+.+.+....+.|+++|
T Consensus 72 -----------a~~~aDiVIiaag~p~--k~--G~~R---~dl~~~N~----~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 72 -----------AIEGADVVIVTAGVPR--KP--GMSR---DDLLGINL----KVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp -----------GGTTCSEEEECCSCCC--C----------CHHHHHHH----HHHHHHHHHHHHHCTTCEEEECC
T ss_pred -----------HHCCCCEEEEccCcCC--CC--CCCH---HHHHHhhH----HHHHHHHHHHHHHCCCeEEEecC
Confidence 1236799999999754 21 1121 23444454 34455555555544567787776
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.021 Score=52.30 Aligned_cols=115 Identities=16% Similarity=0.162 Sum_probs=71.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|.|+|| |.+|..++..|+..+. +|++.++++++++....++....+ ....+.... | +
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~v~~-~--~ 66 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA--------------FTAPKKIYS-G--E 66 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG--------------GSCCCEEEE-C--C
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH--------------hcCCeEEEE-C--C
Confidence 367999999 9999999999998885 899999999988877777755321 011222221 2 2
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
. +.+...|++|..+|... .+ ..+. ...+..| ..+++.+.+.+.+....+.|+++|
T Consensus 67 ~-----------~a~~~aDvVii~ag~~~--~~--g~~R---~dl~~~n----~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 67 Y-----------SDCKDADLVVITAGAPQ--KP--GESR---LDLVNKN----LNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp G-----------GGGTTCSEEEECCCC-----------------CHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred H-----------HHhCCCCEEEECCCCCC--CC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEeC
Confidence 1 12347899999999754 21 1111 1223333 345566666666655677888875
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0053 Score=57.91 Aligned_cols=43 Identities=16% Similarity=0.094 Sum_probs=36.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
...|++|||.|+ +++|...++.+...|+ +|+++++++++++.+
T Consensus 183 ~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a 226 (398)
T 1kol_A 183 VGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA 226 (398)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH
Confidence 456899999995 9999999888888998 699999998877543
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0016 Score=59.62 Aligned_cols=38 Identities=11% Similarity=0.043 Sum_probs=33.6
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS 45 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~ 45 (347)
....|.+++|+||++++|...++.+...|++|+.++++
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~ 186 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK 186 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence 34568999999999999999999999999999998854
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0031 Score=53.86 Aligned_cols=42 Identities=33% Similarity=0.378 Sum_probs=36.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE 55 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~ 55 (347)
+++|+||+|.+|.++++.|++.|++|++.+|++++.++..++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~ 43 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE 43 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 578999999999999999999999999999998877665443
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0055 Score=57.22 Aligned_cols=44 Identities=5% Similarity=0.080 Sum_probs=36.4
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
....|++|||+|+ ++||...++.+...|+ +|+.+++++++++.+
T Consensus 187 ~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a 231 (371)
T 1f8f_A 187 KVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA 231 (371)
T ss_dssp CCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence 3456899999995 8999999988888898 699999998876543
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0031 Score=58.51 Aligned_cols=42 Identities=7% Similarity=-0.050 Sum_probs=35.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
...|.+|||+|+ ++||...++.+...|+ +|+++++++++++.
T Consensus 164 ~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~ 206 (352)
T 3fpc_A 164 IKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI 206 (352)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH
Confidence 356889999996 8999999988888998 89999999887653
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.024 Score=51.74 Aligned_cols=115 Identities=10% Similarity=0.090 Sum_probs=71.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++.|+|+ |.+|..+|..|+..|. +|++.++++++++....++...... ..........| +.
T Consensus 2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-------------~~~~~~v~~~~--~~- 64 (314)
T 3nep_X 2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI-------------HGFDTRVTGTN--DY- 64 (314)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH-------------HTCCCEEEEES--SS-
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc-------------cCCCcEEEECC--CH-
Confidence 4788997 9999999999999886 8999999999887766777653211 01112222112 11
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+.+..-|++|..||... .+ ..+ -...++.|. .+++...+.+.+....+.|+++|
T Consensus 65 ----------~a~~~aDvVii~ag~~~--kp--G~~---R~dl~~~N~----~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 65 ----------GPTEDSDVCIITAGLPR--SP--GMS---RDDLLAKNT----EIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp ----------GGGTTCSEEEECCCC--------------CHHHHHHHH----HHHHHHHHHHHTTCTTCEEEECC
T ss_pred ----------HHhCCCCEEEECCCCCC--CC--CCC---HHHHHHhhH----HHHHHHHHHHHHhCCCcEEEecC
Confidence 12346899999999753 22 111 123455554 44566666666655567788776
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0015 Score=58.90 Aligned_cols=41 Identities=15% Similarity=0.056 Sum_probs=36.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
.+|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++
T Consensus 121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 162 (282)
T ss_dssp TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 4799999997 5999999999999998 899999999876554
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0077 Score=56.83 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=36.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
...|.+|||+|+ +++|...++.+...|+ +|+.+++++++++.
T Consensus 183 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 225 (398)
T 2dph_A 183 VKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL 225 (398)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 456899999997 9999999888878899 89999999887654
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0028 Score=58.96 Aligned_cols=40 Identities=18% Similarity=0.134 Sum_probs=33.5
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
....|.+|||+||++++|...++.+...|++|+++.++.+
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 3456899999999999999998888788999888876544
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.016 Score=54.19 Aligned_cols=41 Identities=7% Similarity=-0.129 Sum_probs=36.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+++|+|.|+ |.+|..+++.+...|++|++.+|++++++.+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 223 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQV 223 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4589999998 6999999999999999999999999887654
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.022 Score=51.87 Aligned_cols=113 Identities=15% Similarity=0.105 Sum_probs=71.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|.|+|| |.+|..++..|+..+ .+|++.++++++++..+.++....+ ....+.... | +.+
T Consensus 2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~--------------~~~~~~v~~-~--~~~ 63 (310)
T 2xxj_A 2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP--------------FAHPVWVWA-G--SYG 63 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG--------------GSCCCEEEE-C--CGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh--------------hcCCeEEEE-C--CHH
Confidence 6889998 999999999999988 5899999999888876777754211 001222221 2 222
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ +...|++|..+|... .+ ..+.++ .+..|.- +++.+.+.+.+....+.|+++|
T Consensus 64 a-----------~~~aD~Vii~ag~~~--~~--g~~r~d---l~~~n~~----i~~~i~~~i~~~~p~a~iiv~t 116 (310)
T 2xxj_A 64 D-----------LEGARAVVLAAGVAQ--RP--GETRLQ---LLDRNAQ----VFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp G-----------GTTEEEEEECCCCCC--CT--TCCHHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred H-----------hCCCCEEEECCCCCC--CC--CcCHHH---HHHhhHH----HHHHHHHHHHHHCCCcEEEEec
Confidence 2 236899999999854 22 233332 3444443 4455555555444567888875
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.088 Score=48.00 Aligned_cols=115 Identities=20% Similarity=0.198 Sum_probs=72.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|.|+|| |.+|..++..|+.+| .+|++.++++++++....++....+- .+..+.... | +.
T Consensus 7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~-------------~~~~~~v~~-~--~~ 69 (317)
T 3d0o_A 7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPY-------------SPTTVRVKA-G--EY 69 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGG-------------SSSCCEEEE-C--CG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhh-------------cCCCeEEEe-C--CH
Confidence 57889999 999999999999988 48999999998887666666553110 111222221 2 21
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ .+.+.|++|..+|... .+ ..+.+ ..+..|. .+.+.+.+.+.+....+.|+++|
T Consensus 70 ~-----------a~~~aDvVvi~ag~~~--~~--g~~r~---dl~~~n~----~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 70 S-----------DCHDADLVVICAGAAQ--KP--GETRL---DLVSKNL----KIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp G-----------GGTTCSEEEECCCCCC--CT--TCCHH---HHHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred H-----------HhCCCCEEEECCCCCC--CC--CCcHH---HHHHHHH----HHHHHHHHHHHHhCCCcEEEEec
Confidence 1 1236899999999854 22 23322 2344443 34455555555554567777764
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0047 Score=57.36 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=32.6
Q ss_pred CeEEEEcCCChHHHHH-HHHH-HHCCCe-EEEEeCChh---HHHH
Q 019009 13 CRWFSVVSTRGLGKAL-AREF-LLSGDR-VVVASRSSE---SVRM 51 (347)
Q Consensus 13 k~vlITGas~GIG~ai-A~~l-a~~G~~-Vil~~R~~~---~l~~ 51 (347)
++|+|+|| +++|... ++.+ ...|++ |+.++++++ +++.
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~ 217 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI 217 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence 89999999 9999999 7766 678997 999999887 6654
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.036 Score=50.85 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=71.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|.|+|| |.+|..++..|+..+. +|++.++++++++....++....+ ....+.... | +
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~i~~-~--~ 70 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP--------------FTSPKKIYS-A--E 70 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG--------------GSCCCEEEE-C--C
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH--------------hcCCeEEEE-C--C
Confidence 357999999 9999999999998884 899999999988877777755211 011222221 2 2
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.++ +...|++|..+|... .+ ..+.+ ..+..|.- +++.+.+.+.+....+.|+++|
T Consensus 71 ~~a-----------~~~aDvVii~ag~~~--k~--g~~R~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 71 YSD-----------AKDADLVVITAGAPQ--KP--GETRL---DLVNKNLK----ILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp GGG-----------GGGCSEEEECCCCC---------CHH---HHHHHHHH----HHHHHHHHHHHHTCCSEEEECS
T ss_pred HHH-----------hCCCCEEEEcCCCCC--CC--CCCHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeC
Confidence 221 236799999999754 22 22322 23444443 4455555554444567888875
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.014 Score=53.80 Aligned_cols=43 Identities=12% Similarity=0.125 Sum_probs=35.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~ 52 (347)
...|.+++|+|+ +++|...++.+... |++|+.+++++++++.+
T Consensus 169 ~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~ 212 (345)
T 3jv7_A 169 LGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA 212 (345)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 456899999998 89999988877666 68999999999887543
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.017 Score=53.21 Aligned_cols=46 Identities=13% Similarity=-0.010 Sum_probs=39.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~ 58 (347)
..+|.|.|| |.+|.++|..|+..|. +|++.++++++++....++..
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~ 55 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH 55 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHh
Confidence 357899998 8999999999999997 999999999988876655554
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.022 Score=52.45 Aligned_cols=48 Identities=10% Similarity=0.227 Sum_probs=38.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENL 60 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~ 60 (347)
+++|+|.|++ |+|.++|+.|+..|. ++.+++++. .|.+.+.+.+++.+
T Consensus 34 ~~~VlIvGaG-GlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in 101 (340)
T 3rui_A 34 NTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 101 (340)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC
Confidence 4889999874 999999999999996 799988753 46666777777654
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.026 Score=49.86 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=34.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
.+ +++|.|+ ||.|++++..|++.|+ +|++++|+.++.++
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~ 147 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA 147 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 35 8899997 8999999999999998 89999999887654
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.039 Score=50.52 Aligned_cols=46 Identities=13% Similarity=0.035 Sum_probs=39.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~ 58 (347)
.++|.|+|| |.+|..+|..|+..|. +|++.++++++++....++..
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~ 50 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH 50 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh
Confidence 357899998 8999999999999997 899999999988766666654
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0098 Score=54.48 Aligned_cols=114 Identities=16% Similarity=0.170 Sum_probs=65.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|.|+|+ |.+|..++..|+..|. +|++.++++++++....++.+..+ ....+.. .. .+.
T Consensus 8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~i-~~--~~~ 69 (318)
T 1y6j_A 8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--------------FMGQMSL-YA--GDY 69 (318)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--------------CTTCEEE-C----CG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH--------------hcCCeEE-EE--CCH
Confidence 56889998 9999999999999986 899999998877655555533100 0011111 11 121
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+.+...|++|..+|... .+ ..+. ...+..|..-...+++.+.++ ...+.|+++|
T Consensus 70 -----------~a~~~aDvVii~~g~p~--k~--g~~r---~dl~~~n~~i~~~i~~~i~~~----~p~a~viv~t 123 (318)
T 1y6j_A 70 -----------SDVKDCDVIVVTAGANR--KP--GETR---LDLAKKNVMIAKEVTQNIMKY----YNHGVILVVS 123 (318)
T ss_dssp -----------GGGTTCSEEEECCCC----------CH---HHHHHHHHHHHHHHHHHHHHH----CCSCEEEECS
T ss_pred -----------HHhCCCCEEEEcCCCCC--CC--CcCH---HHHHHhhHHHHHHHHHHHHHh----CCCcEEEEec
Confidence 12347899999999753 21 2222 234555655444455544444 2467777764
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.017 Score=54.57 Aligned_cols=41 Identities=10% Similarity=-0.026 Sum_probs=36.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+.+|+|.|+ |.+|...++.+...|++|+++++++++++.+
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 229 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV 229 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 3578999999 6999999999999999999999999886654
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.013 Score=52.85 Aligned_cols=95 Identities=11% Similarity=-0.024 Sum_probs=58.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
++..+++.|.| .|-+|..+|+.|++.|++|++.+|++++.+...+. . ... ..+...... ...+..=+.
T Consensus 12 M~~~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~----g---~~~--~~~~~~~~~--aDvvi~~vp 79 (296)
T 3qha_A 12 TTEQLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA----G---ATL--ADSVADVAA--ADLIHITVL 79 (296)
T ss_dssp ---CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT----T---CEE--CSSHHHHTT--SSEEEECCS
T ss_pred ccCCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC----C---CEE--cCCHHHHHh--CCEEEEECC
Confidence 33345788887 46899999999999999999999999877655431 0 000 000000011 233444566
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
+...++.+++.+.....+=.++|++..
T Consensus 80 ~~~~~~~v~~~l~~~l~~g~ivv~~st 106 (296)
T 3qha_A 80 DDAQVREVVGELAGHAKPGTVIAIHST 106 (296)
T ss_dssp SHHHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 677888888777765444456776654
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0095 Score=56.03 Aligned_cols=41 Identities=10% Similarity=-0.059 Sum_probs=36.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+++++|+|+ |++|+++++.+...|++|++++|++++++.+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4799999996 7999999999999999999999998876554
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.21 E-value=0.011 Score=54.98 Aligned_cols=79 Identities=18% Similarity=0.315 Sum_probs=59.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
+++|+|.|+ +|+|.++++.|+..|. ++.+++++. .|.+.+.+.+.+.++
T Consensus 118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------- 186 (353)
T 3h5n_A 118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS---------- 186 (353)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC----------
Confidence 478999998 6999999999999996 899998763 356666677766543
Q ss_pred cccccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 72 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
..++..+..++++..++. + +.+.|+||.+.
T Consensus 187 -----~v~v~~~~~~i~~~~~~~-------~-~~~~DlVvd~~ 216 (353)
T 3h5n_A 187 -----EISVSEIALNINDYTDLH-------K-VPEADIWVVSA 216 (353)
T ss_dssp -----TSEEEEEECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred -----CCeEEEeecccCchhhhh-------H-hccCCEEEEec
Confidence 356778888887654322 2 45789999866
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0058 Score=55.63 Aligned_cols=43 Identities=16% Similarity=0.025 Sum_probs=36.3
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
....|.++||+|| +++|...++.+...|++|+.++ ++++++.+
T Consensus 139 ~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~ 181 (315)
T 3goh_A 139 PLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA 181 (315)
T ss_dssp CCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence 3456899999999 9999999988888999999999 77776543
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0041 Score=57.04 Aligned_cols=43 Identities=19% Similarity=0.125 Sum_probs=36.8
Q ss_pred cCCC-eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 10 SCTC-RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k-~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
..|+ ++||+||++|+|...++.+...|++|+++++++++++.+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~ 191 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL 191 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3454 899999999999999999888999999999998876543
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.053 Score=49.28 Aligned_cols=45 Identities=11% Similarity=-0.037 Sum_probs=38.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~ 58 (347)
++|.|+|| |.+|..++..|+..|. +|++.++++++++....++.+
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~ 48 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE 48 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence 57899999 9999999999999996 899999999888765555544
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0073 Score=55.15 Aligned_cols=40 Identities=13% Similarity=0.046 Sum_probs=35.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
|+ +||+||++++|...++.+...|++|+.+++++++++.+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~ 187 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL 187 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 45 99999999999999999999999999999999887544
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.11 Score=47.90 Aligned_cols=116 Identities=11% Similarity=0.088 Sum_probs=68.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
-+|.|+||+|+||..++..|++... .+++.+.++. +++-..-++.... .......+
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~---------------~~~~~~~~ 89 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA---------------FPLLDKVV 89 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT---------------CTTEEEEE
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC---------------ccCCCcEE
Confidence 4799999999999999999987642 6899998763 4455555665421 11111111
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-CCCcEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHI 162 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-~~~g~I 162 (347)
.. ++.. +.+.+.|++|..||... .| ..+.+ +.++.|.. +++...+.+.+. .+...|
T Consensus 90 ~~--~~~~----------~a~~~advVvi~aG~pr--kp--GmtR~---DLl~~Na~----I~~~~~~~i~~~a~~~~~v 146 (345)
T 4h7p_A 90 VT--ADPR----------VAFDGVAIAIMCGAFPR--KA--GMERK---DLLEMNAR----IFKEQGEAIAAVAASDCRV 146 (345)
T ss_dssp EE--SCHH----------HHTTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHH----HHHHHHHHHHHHSCTTCEE
T ss_pred Ec--CChH----------HHhCCCCEEEECCCCCC--CC--CCCHH---HHHHHhHH----HHHHHHHHHHhhccCceEE
Confidence 11 1211 12347899999999864 22 34444 34666654 445555555442 133455
Q ss_pred EEEc
Q 019009 163 FNMD 166 (347)
Q Consensus 163 v~vs 166 (347)
+.+|
T Consensus 147 lvvs 150 (345)
T 4h7p_A 147 VVVG 150 (345)
T ss_dssp EECS
T ss_pred EEeC
Confidence 5554
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.015 Score=55.35 Aligned_cols=40 Identities=20% Similarity=0.231 Sum_probs=35.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
+..|+|.|. |-+|..+++.|.++|..|+++++++++.+.+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~ 43 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETL 43 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 356899997 6799999999999999999999999876654
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.09 E-value=0.033 Score=55.10 Aligned_cols=88 Identities=10% Similarity=0.119 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhhhhhhhcCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMAAGGSS 71 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~~~~ 71 (347)
+++|+|.|++ |+|.++|+.|+..|. ++.+++++. .|.+.+.+.+++.++
T Consensus 326 ~arVLIVGaG-GLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP---------- 394 (615)
T 4gsl_A 326 NTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP---------- 394 (615)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred CCeEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC----------
Confidence 4789999985 999999999999996 899998764 466777777777543
Q ss_pred cccccCceeeEEecCC-------CCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 72 KKNLVHAKVAGIACDV-------CEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 72 ~~~~~~~~~~~~~~Dl-------s~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
..++..+..++ ++.+...--.+.+.+.+.+.|+||++..
T Consensus 395 -----~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD 440 (615)
T 4gsl_A 395 -----LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD 440 (615)
T ss_dssp -----TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred -----CcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence 34566666554 2221111111112222235799998764
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.1 Score=47.47 Aligned_cols=45 Identities=9% Similarity=0.121 Sum_probs=37.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~ 58 (347)
++|.|+|+ |.+|..++..|+..|. +|++.++++++++....++..
T Consensus 7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~ 53 (316)
T 1ldn_A 7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH 53 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHH
Confidence 68999999 9999999999998874 899999998877665566654
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.21 Score=44.96 Aligned_cols=115 Identities=13% Similarity=0.140 Sum_probs=74.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.|.|+|| |+||..+|..|+.+| .++++.+.++++.+-.+.+|....+. .......... .|.+
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~-------------~~~~~~i~~~--~d~~ 65 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-------------IDKYPKIVGG--ADYS 65 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGG-------------GTCCCEEEEE--SCGG
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccccc-------------CCCCCeEecC--CCHH
Confidence 3667795 999999999999888 37999999998888777777664221 1111111211 1222
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ +..-|++|..||... .| ..+.+ ..++.|.. +.+.+.+.+.+....+.|+.+|
T Consensus 66 ~-----------~~~aDvVvitAG~pr--kp--GmtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvs 118 (294)
T 2x0j_A 66 L-----------LKGSEIIVVTAGLAR--KP--GMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp G-----------GTTCSEEEECCCCCC--CS--SSCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECS
T ss_pred H-----------hCCCCEEEEecCCCC--CC--CCchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEec
Confidence 1 236799999999864 22 34443 34566653 5566677776665567777775
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.038 Score=50.50 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=37.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~ 58 (347)
++.|.|+ |.+|.+++..|++.|. +|++.+|++++++....++..
T Consensus 2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~ 47 (319)
T 1a5z_A 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH 47 (319)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHh
Confidence 5789998 8999999999999998 999999999888776655543
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.073 Score=48.48 Aligned_cols=44 Identities=11% Similarity=-0.014 Sum_probs=37.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l 56 (347)
.+++.|.|+ |.+|.++|..|++.|. +|++.++++++++....++
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l 48 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDI 48 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHH
Confidence 467899998 8999999999999998 9999999998877644333
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.088 Score=47.91 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=67.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-C--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 14 RWFSVVSTRGLGKALAREFLLS-G--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~-G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+|.|+||+|.+|.+++..|+.+ + .+++++++++ +.+....++.... ...++..+.. -.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~---------------~~~~v~~~~~-~~~~ 64 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP---------------TAVKIKGFSG-EDAT 64 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC---------------SSEEEEEECS-SCCH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC---------------CCceEEEecC-CCcH
Confidence 5789999999999999999875 5 4899999987 4444444554310 1112222211 0111
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ .+.+.|++|..||... .+ ..+. ...++.|..-...+.+.+ .+....+.|+++|
T Consensus 65 ~-----------~~~~aDivii~ag~~r--kp--G~~R---~dll~~N~~I~~~i~~~i----~~~~p~a~vlvvt 118 (312)
T 3hhp_A 65 P-----------ALEGADVVLISAGVAR--KP--GMDR---SDLFNVNAGIVKNLVQQV----AKTCPKACIGIIT 118 (312)
T ss_dssp H-----------HHTTCSEEEECCSCSC--CT--TCCH---HHHHHHHHHHHHHHHHHH----HHHCTTSEEEECS
T ss_pred H-----------HhCCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHH----HHHCCCcEEEEec
Confidence 1 1236899999999754 22 2333 445666654444444444 3333467788775
|
| >1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.032 Score=53.86 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=36.9
Q ss_pred CeEEEEcCCC-hHHHHHHHHHHHC----CCeEEEEeCChhHHHHHHHHH
Q 019009 13 CRWFSVVSTR-GLGKALAREFLLS----GDRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 13 k~vlITGas~-GIG~aiA~~la~~----G~~Vil~~R~~~~l~~~~~~l 56 (347)
++|.|.||++ |.|.++|..|++. |.+|++.++++++++...+..
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~ 52 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIA 52 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHH
Confidence 5788999999 9999999998864 889999999999887755544
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.082 Score=48.04 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=70.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+|.|+|| |.+|..++..++..|. +|++.++++++++....++....... ....++... .| .+
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~-----------~~~~~i~~t-~d---~~- 63 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAEL-----------GVDIRISGS-NS---YE- 63 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHH-----------TCCCCEEEE-SC---GG-
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhc-----------CCCeEEEEC-CC---HH-
Confidence 3789998 9999999999998887 79999999998877666665532100 011122211 22 11
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.+...|++|..+|... .+ ..+.+ ..+..|. .+.+.+.+.+.+....+.|+++|
T Consensus 64 ----------a~~~aD~Vi~~ag~~~--k~--G~~r~---dl~~~n~----~i~~~i~~~i~~~~p~a~iiv~t 116 (308)
T 2d4a_B 64 ----------DMRGSDIVLVTAGIGR--KP--GMTRE---QLLEANA----NTMADLAEKIKAYAKDAIVVITT 116 (308)
T ss_dssp ----------GGTTCSEEEECCSCCC--CS--SCCTH---HHHHHHH----HHHHHHHHHHHHHCTTCEEEECC
T ss_pred ----------HhCCCCEEEEeCCCCC--CC--CCcHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEeC
Confidence 1236899999999854 22 22222 2233333 34555556655533567777775
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.025 Score=51.98 Aligned_cols=41 Identities=12% Similarity=0.051 Sum_probs=33.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVR 50 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~ 50 (347)
...|.+++|.|| +|+|...+..+... |++|+.+++++++++
T Consensus 161 ~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~ 202 (348)
T 4eez_A 161 VKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLN 202 (348)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHH
T ss_pred CCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhh
Confidence 356789999987 67887777777765 689999999998764
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.89 E-value=0.18 Score=45.61 Aligned_cols=44 Identities=16% Similarity=0.238 Sum_probs=38.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELE 57 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~ 57 (347)
+++.|.| +|.+|.++|..|++.| .+|++.+|++++++....++.
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~ 47 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQ 47 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 4688999 7899999999999999 799999999988877666554
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.14 Score=46.99 Aligned_cols=45 Identities=9% Similarity=-0.042 Sum_probs=38.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~ 58 (347)
++|.|+|| |.+|.++|..|+..|. +|++.++++++++....++..
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~ 60 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNH 60 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHh
Confidence 57999998 8999999999999998 999999999988865555544
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.029 Score=55.35 Aligned_cols=48 Identities=10% Similarity=0.218 Sum_probs=38.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENL 60 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~ 60 (347)
+++|+|.|++ |+|.++|+.|+..|. ++.+++.+ ..|.+.+.+.+++.+
T Consensus 327 ~~kVLIVGaG-GLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iN 394 (598)
T 3vh1_A 327 NTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 394 (598)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHC
T ss_pred CCeEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHC
Confidence 4789999875 999999999999996 79999654 257777888887754
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.039 Score=50.64 Aligned_cols=41 Identities=15% Similarity=0.093 Sum_probs=33.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~ 51 (347)
..|++++|+|+ +|+|...++.+...|++ ++++++++++++.
T Consensus 159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~ 200 (346)
T 4a2c_A 159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL 200 (346)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH
Confidence 46799999987 89999999988899986 4677888887643
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.04 Score=48.63 Aligned_cols=94 Identities=20% Similarity=0.167 Sum_probs=55.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+.++.|.|+ |.+|..+++.|++.|++ |.+.+|++++.++..+++.-.. ..+ ........++.++ ....
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-----~~~--~~~~~~~~Dvvi~---av~~ 78 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY-----TTD--LAEVNPYAKLYIV---SLKD 78 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-----ESC--GGGSCSCCSEEEE---CCCH
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-----eCC--HHHHhcCCCEEEE---ecCH
Confidence 356888897 89999999999999998 8899999988766544321000 000 0000011222222 2234
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
..+.++++.+.....+=.++|++.+.
T Consensus 79 ~~~~~v~~~l~~~~~~~~ivv~~s~~ 104 (266)
T 3d1l_A 79 SAFAELLQGIVEGKREEALMVHTAGS 104 (266)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEECCTT
T ss_pred HHHHHHHHHHHhhcCCCcEEEECCCC
Confidence 46677777776543233467777754
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.024 Score=51.20 Aligned_cols=46 Identities=13% Similarity=0.163 Sum_probs=39.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE 57 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~ 57 (347)
..++|.|.|+ |.+|.++|..|++.|++|++.+|++++++...+.+.
T Consensus 14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~ 59 (302)
T 1f0y_A 14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE 59 (302)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH
Confidence 3478999998 789999999999999999999999998877655443
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.02 Score=53.39 Aligned_cols=44 Identities=20% Similarity=0.181 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~ 55 (347)
.||+++|.|+ +.+|..+|+.|.+.|++|++.+++++++++..++
T Consensus 172 ~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~ 215 (364)
T 1leh_A 172 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE 215 (364)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 4799999997 7899999999999999999999998877665544
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.021 Score=51.10 Aligned_cols=40 Identities=10% Similarity=0.023 Sum_probs=36.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
+++.|.|++|-+|.++++.|++.|++|++.+|++++.+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~ 51 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRL 51 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 5899999999999999999999999999999998876543
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=95.68 E-value=0.061 Score=51.90 Aligned_cols=41 Identities=5% Similarity=-0.078 Sum_probs=34.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-----CCeEEEEeCChhHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLS-----GDRVVVASRSSESVRMTV 53 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~-----G~~Vil~~R~~~~l~~~~ 53 (347)
++|.|.||+++.|.++|..|+.+ +.+|++.++++++++...
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~ 74 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA 74 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH
Confidence 47889999888888899999988 668999999999887654
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.038 Score=49.44 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=55.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH-------HHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE-------LEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
+++.|.|+ |.+|..+|+.|++.|++|++.+|++++.++..+. +.+.. .....+..
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-----------------~~aDvvi~ 63 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVV-----------------ESCPVTFA 63 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH-----------------HHCSEEEE
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHH-----------------hcCCEEEE
Confidence 46788885 7899999999999999999999999887655431 11100 01223333
Q ss_pred CCCCHHHHHHHH---HHHHhhcCCccEEEEcCC
Q 019009 86 DVCEPADVQKLS---NFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 86 Dls~~~~v~~~~---~~i~~~~g~iD~li~nAG 115 (347)
=+.+...++.++ +.+.....+=.++|+..+
T Consensus 64 ~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 64 MLADPAAAEEVCFGKHGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp CCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred EcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence 455566777777 666554433356666643
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.61 E-value=0.018 Score=51.38 Aligned_cols=45 Identities=18% Similarity=0.179 Sum_probs=38.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.++..+++
T Consensus 118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~ 163 (271)
T 1npy_A 118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 163 (271)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 4688999995 6999999999999997 7999999999887766554
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.019 Score=50.43 Aligned_cols=77 Identities=12% Similarity=0.193 Sum_probs=55.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+|+|.|++|.+|+.+++.+.+. |++|+.+....+.+++.. . .... +..|++.++.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~-----------------~~~D---vvIDfT~p~a 57 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----D-----------------GNTE---VVIDFTHPDV 57 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----H-----------------TTCC---EEEECSCTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----c-----------------cCCc---EEEEccChHH
Confidence 5899999999999999999876 888876554333332221 1 0112 5679999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+.+.+..+.+. ++++||-..|.
T Consensus 58 ~~~~~~~a~~~--g~~~VigTTG~ 79 (245)
T 1p9l_A 58 VMGNLEFLIDN--GIHAVVGTTGF 79 (245)
T ss_dssp HHHHHHHHHHT--TCEEEECCCCC
T ss_pred HHHHHHHHHHc--CCCEEEcCCCC
Confidence 98888877665 78999877763
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.13 Score=48.03 Aligned_cols=123 Identities=9% Similarity=0.102 Sum_probs=71.0
Q ss_pred CCcccCCCeEEEEcCCChHHHHHHHHHHHCCC--e---EEEEeCC----hhHHHHHHHHHHHHhhhhhhhcCCCCccccc
Q 019009 6 DEHWSCTCRWFSVVSTRGLGKALAREFLLSGD--R---VVVASRS----SESVRMTVTELEENLKEGMMAAGGSSKKNLV 76 (347)
Q Consensus 6 ~~~~~~~k~vlITGas~GIG~aiA~~la~~G~--~---Vil~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 76 (347)
..+|....+|.||||+|.||.+++..|+..+. + |++...+ +++++..+-+|.....
T Consensus 26 ~~~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~--------------- 90 (375)
T 7mdh_A 26 TKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY--------------- 90 (375)
T ss_dssp ---CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC---------------
T ss_pred HhhCCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh---------------
Confidence 35666667899999999999999999998873 2 7776543 3345555556654210
Q ss_pred CceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC
Q 019009 77 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ 156 (347)
Q Consensus 77 ~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~ 156 (347)
.-...+ .+.+ +. .+.+...|++|..||... .| ..+. ...++.|.. +++...+.+.+.
T Consensus 91 -p~~~~v--~i~~-~~--------y~~~~daDvVVitag~pr--kp--G~tR---~DLl~~N~~----I~k~i~~~i~~~ 147 (375)
T 7mdh_A 91 -PLLREV--SIGI-DP--------YEVFEDVDWALLIGAKPR--GP--GMER---AALLDINGQ----IFADQGKALNAV 147 (375)
T ss_dssp -TTEEEE--EEES-CH--------HHHTTTCSEEEECCCCCC--CT--TCCH---HHHHHHHHH----HHHHHHHHHHHH
T ss_pred -hhcCCc--EEec-CC--------HHHhCCCCEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHh
Confidence 001111 1111 11 223347899999999753 22 2332 345566653 455555555542
Q ss_pred -CCCcEEEEEc
Q 019009 157 -PKGGHIFNMD 166 (347)
Q Consensus 157 -~~~g~Iv~vs 166 (347)
...+.|+++|
T Consensus 148 a~p~~ivlVvs 158 (375)
T 7mdh_A 148 ASKNVKVLVVG 158 (375)
T ss_dssp SCTTCEEEECS
T ss_pred cCCCeEEEEec
Confidence 3457777775
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.0019 Score=60.09 Aligned_cols=38 Identities=18% Similarity=0.118 Sum_probs=33.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES 48 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~ 48 (347)
..||++.|.| .+.||+.+|+.|.+.|++|++.++++++
T Consensus 173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 3579999997 5799999999999999999998988765
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.51 E-value=0.067 Score=48.23 Aligned_cols=37 Identities=22% Similarity=0.172 Sum_probs=33.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES 48 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~ 48 (347)
++++.|.||.|-||.++|+.|++.|++|++++|+++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~ 57 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA 57 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc
Confidence 4689999999999999999999999999999998763
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.098 Score=46.73 Aligned_cols=92 Identities=12% Similarity=0.147 Sum_probs=57.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~---~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+++.|.|+ |-+|.++++.|++.|+ +|++.+|+++++++..+++.-.. . ..........++.++.+ .
T Consensus 4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~------~-~~~~~~~~~aDvVilav---~ 72 (280)
T 3tri_A 4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT------T-QDNRQGALNADVVVLAV---K 72 (280)
T ss_dssp SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE------E-SCHHHHHSSCSEEEECS---C
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE------e-CChHHHHhcCCeEEEEe---C
Confidence 56788887 7899999999999998 89999999998776654310000 0 00000001234444443 4
Q ss_pred HHHHHHHHHHHHhh-cCCccEEEEcCC
Q 019009 90 PADVQKLSNFAVNE-FGSIDIWINNAG 115 (347)
Q Consensus 90 ~~~v~~~~~~i~~~-~g~iD~li~nAG 115 (347)
++.++.+++++... ..+=.++|++++
T Consensus 73 p~~~~~vl~~l~~~~l~~~~iiiS~~a 99 (280)
T 3tri_A 73 PHQIKMVCEELKDILSETKILVISLAV 99 (280)
T ss_dssp GGGHHHHHHHHHHHHHTTTCEEEECCT
T ss_pred HHHHHHHHHHHHhhccCCCeEEEEecC
Confidence 56777777777654 433237777664
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=95.42 E-value=0.017 Score=53.00 Aligned_cols=71 Identities=13% Similarity=-0.007 Sum_probs=55.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.+.++|.|+ +.+|+.+++.|.++|. |+++++++++.+ .. + ..+.++..|.+|++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~-------------------~~~~~i~gd~~~~~ 168 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R-------------------SGANFVHGDPTRVS 168 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H-------------------TTCEEEESCTTSHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h-------------------CCcEEEEeCCCCHH
Confidence 468999997 7999999999999999 999999998765 22 1 23668899999998
Q ss_pred HHHHHHHHHHhhcCCccEEEEcC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nA 114 (347)
.++++ ...+.|.+|...
T Consensus 169 ~L~~a------~i~~a~~vi~~~ 185 (336)
T 1lnq_A 169 DLEKA------NVRGARAVIVDL 185 (336)
T ss_dssp HHHHT------CSTTEEEEEECC
T ss_pred HHHhc------ChhhccEEEEcC
Confidence 87764 113578888755
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=95.41 E-value=0.011 Score=52.84 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=35.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+++++|.|+ |++|+++++.|++.|++|++++|++++.++.
T Consensus 128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l 168 (275)
T 2hk9_A 128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL 168 (275)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence 3589999996 6999999999999999999999998876543
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.029 Score=49.70 Aligned_cols=43 Identities=21% Similarity=0.153 Sum_probs=36.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~ 55 (347)
.| +++|.|+ |++|+++++.|.+.|++|++++|+.++.++..++
T Consensus 116 ~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~ 158 (263)
T 2d5c_A 116 KG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE 158 (263)
T ss_dssp CS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred CC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 35 8999997 7899999999999999999999998877665543
|
| >1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=95.29 E-value=0.1 Score=50.07 Aligned_cols=41 Identities=5% Similarity=0.039 Sum_probs=34.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-----CCeEEEEeCCh--hHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLS-----GDRVVVASRSS--ESVRMTV 53 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~-----G~~Vil~~R~~--~~l~~~~ 53 (347)
..|.|.||++.+|.+++..|+.+ +.+|++.++++ ++++...
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~ 55 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVG 55 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHH
Confidence 46888999888899999999984 56899999999 8877643
|
| >3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.28 Score=47.45 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=39.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEEN 59 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~ 59 (347)
++|.|.|+ |-+|.+||..|++.|++|++.+|+++++++..+.+.+.
T Consensus 6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~ 51 (483)
T 3mog_A 6 QTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHAR 51 (483)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHH
Confidence 46677776 78999999999999999999999999998887766544
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.019 Score=51.46 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=36.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
.||+++|.|+|+-+|+.+|..|+++|++|.++.|+...+++
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~ 199 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL 199 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence 57999999999999999999999999999999887665543
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.41 Score=43.32 Aligned_cols=115 Identities=22% Similarity=0.190 Sum_probs=68.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++.|+|+ |.+|..+|..|++. |.+|++.++++++++....++....... ....++.. . +|.+
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~-----------~~~~~i~~-t---~d~~ 65 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVG-----------LFDTKVTG-S---NDYA 65 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHH-----------TCCCEEEE-E---SCGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcc-----------cCCcEEEE-C---CCHH
Confidence 5789998 99999999999985 7899999999988775544443211000 01112211 1 2221
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ +...|++|.++|... .+ ..+ -...+..|..-...+.+.+.++. ..+.|++++
T Consensus 66 ~-----------l~~aDvViiav~~p~--~~--g~~---r~dl~~~n~~i~~~i~~~i~~~~----~~~~viv~t 118 (310)
T 1guz_A 66 D-----------TANSDIVIITAGLPR--KP--GMT---REDLLMKNAGIVKEVTDNIMKHS----KNPIIIVVS 118 (310)
T ss_dssp G-----------GTTCSEEEECCSCCC--CT--TCC---HHHHHHHHHHHHHHHHHHHHHHC----SSCEEEECC
T ss_pred H-----------HCCCCEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHhC----CCcEEEEEc
Confidence 1 236899999998643 11 122 22455566555555555555552 456777774
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.24 E-value=0.07 Score=48.64 Aligned_cols=40 Identities=15% Similarity=0.146 Sum_probs=34.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV 53 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~ 53 (347)
++|.|.|+ |.+|..+|+.|++.|++|++.+|++++.++..
T Consensus 32 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~ 71 (320)
T 4dll_A 32 RKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLA 71 (320)
T ss_dssp SEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence 57888876 78999999999999999999999998876554
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.03 Score=53.95 Aligned_cols=73 Identities=8% Similarity=0.194 Sum_probs=53.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
.+++|.|++ -+|+.+|+.|.++|+.|+++++++++++.+.+++ .+..+..|.++++.
T Consensus 4 M~iiI~G~G-~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------------------~~~~i~Gd~~~~~~ 60 (461)
T 4g65_A 4 MKIIILGAG-QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------------------DLRVVNGHASHPDV 60 (461)
T ss_dssp EEEEEECCS-HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------------------SCEEEESCTTCHHH
T ss_pred CEEEEECCC-HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------------------CcEEEEEcCCCHHH
Confidence 357888875 7999999999999999999999999876554332 35567788888777
Q ss_pred HHHHHHHHHhhcCCccEEEEcC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nA 114 (347)
++++= ...-|++|...
T Consensus 61 L~~Ag------i~~ad~~ia~t 76 (461)
T 4g65_A 61 LHEAG------AQDADMLVAVT 76 (461)
T ss_dssp HHHHT------TTTCSEEEECC
T ss_pred HHhcC------CCcCCEEEEEc
Confidence 66641 12456666543
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.037 Score=50.06 Aligned_cols=40 Identities=25% Similarity=0.219 Sum_probs=35.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
..||+++|.|+ |+||+++|+.|...|++|++.+|++++.+
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~ 194 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA 194 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 35799999996 89999999999999999999999987654
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=95.15 E-value=0.032 Score=49.69 Aligned_cols=43 Identities=14% Similarity=0.070 Sum_probs=37.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
..||+++|.|+++-+|+.+|+.|++.|++|.++.|+...+++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~ 190 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM 190 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh
Confidence 4589999999999999999999999999999998876555443
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=95.08 E-value=0.0089 Score=54.61 Aligned_cols=38 Identities=13% Similarity=0.120 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES 48 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~ 48 (347)
.||+++|.|++.-+|+-+|+.|++.|++|.++.|+..+
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~ 213 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ 213 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHH
Confidence 47999999999888999999999999999999998543
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=95.05 E-value=0.012 Score=60.71 Aligned_cols=39 Identities=13% Similarity=0.035 Sum_probs=34.7
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
+...|.+|||.||++|+|.+.++.....|++|+.+++++
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~ 380 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED 380 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence 456789999999999999999988888999999998765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 347 | ||||
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-33 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 3e-32 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 4e-31 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 2e-30 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 7e-29 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 1e-28 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 2e-28 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 2e-28 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 4e-28 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 5e-28 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 6e-28 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 7e-28 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 1e-27 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 2e-27 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 2e-27 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 2e-27 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 1e-26 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 1e-25 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 1e-25 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 3e-25 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 4e-25 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 4e-25 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 4e-25 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 5e-25 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 6e-25 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 2e-24 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-24 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 1e-23 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 1e-23 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 2e-23 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 3e-23 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 5e-23 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 4e-21 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 4e-21 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 5e-21 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 8e-21 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 9e-21 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 2e-20 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 4e-20 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 1e-19 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-19 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-19 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 6e-19 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-18 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 1e-18 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 2e-18 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-18 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 7e-18 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 1e-17 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-17 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 1e-16 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 5e-16 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 3e-13 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 6e-12 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 1e-11 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 2e-11 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-11 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-11 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 1e-10 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 3e-09 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 8e-08 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 5e-07 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 1e-06 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 2e-06 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 4e-06 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 9e-05 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 7e-04 |
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 1e-33
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 24/235 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++ G+G A+AR + G +VV +R+ ++ E + G
Sbjct: 18 ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG---------------T 62
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ CD+ D+ + + ++ +DI INNAG + LL + + + + N+
Sbjct: 63 LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNV 121
Query: 140 VGSILCTREAMRVMRDQ-PKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
+ +CTREA + M+++ GHI N+ +G +T Y +TK + L L +
Sbjct: 122 LALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 181
Query: 198 ESKRSKVG--VHTASPGMVLTDLLLSGSTIQNKQMFNIICEL----PETVARTLV 246
E + ++ SPG+V T ++ ++ PE VA ++
Sbjct: 182 ELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVI 236
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 119 bits (299), Expect = 3e-32
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 19/203 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G+A A F G +V + R +E + T ++ AAG S +
Sbjct: 13 SSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL--------AAGVSEQN------ 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVS 136
V + DV A ++ + + +FG +DI +NNAG K + E + ++
Sbjct: 59 VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLN 118
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
NL I T++A+ + G I N+ SG +TP Y K + Q +
Sbjct: 119 LNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTA 176
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
+ + + V++ SPG+V T
Sbjct: 177 IDLIQHGIRVNSISPGLVATGFG 199
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 115 bits (290), Expect = 4e-31
Identities = 42/200 (21%), Positives = 72/200 (36%), Gaps = 22/200 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G+A+A F + G + +A E E ++ G +
Sbjct: 13 GANGIGRAIAERFAVEGADIAIADLVPAP------EAEAAIRN----LGR---------R 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V + CDV +P DV+ ++ FG DI +NNAG P + T E+ ++ N+
Sbjct: 54 VLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINV 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
L + + M+ G I Y STK +L +
Sbjct: 113 DSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI--EAYTHYISTKAANIGFTRALASDL 170
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ + V+ +P +V T
Sbjct: 171 GKDGITVNAIAPSLVRTATT 190
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 114 bits (286), Expect = 2e-30
Identities = 43/202 (21%), Positives = 74/202 (36%), Gaps = 26/202 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G+A+A+ F G V + E E+ E +
Sbjct: 13 GARGIGRAIAQAFAREGALVALCDLRPEGK-----EVAEAIG------------------ 49
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
A D+ + + + A G +D+ +NNA L E +++ NL
Sbjct: 50 GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNL 108
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ + A R MR GG + G + A Y ++K GL L SL +
Sbjct: 109 TAPMHLSALAAREMRKV--GGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDL 166
Query: 200 KRSKVGVHTASPGMVLTDLLLS 221
++ V+ +PG + T+ +L
Sbjct: 167 APLRIRVNAVAPGAIATEAVLE 188
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 110 bits (276), Expect = 7e-29
Identities = 46/203 (22%), Positives = 75/203 (36%), Gaps = 19/203 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G+ A F G V + RSSE + T + K + +
Sbjct: 13 SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIIL--------------KSGVSEKQ 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE---QIVS 136
V + DV ++ N + +FG ID+ +NNAG T++ I+ + +
Sbjct: 59 VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 118
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
NL I T++ + + AG P Y K L Q S
Sbjct: 119 LNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ--PDFLYYAIAKAALDQYTRSTA 176
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
+ + + V++ SPGMV T
Sbjct: 177 IDLAKFGIRVNSVSPGMVETGFT 199
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (273), Expect = 1e-28
Identities = 47/230 (20%), Positives = 78/230 (33%), Gaps = 29/230 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+ A EF ++V+ + + T + + AK
Sbjct: 15 AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-----------------GAK 57
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V D D+ + E G + I +NNAG L + +IE+ N+
Sbjct: 58 VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNV 116
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE- 198
+ T+ + M GHI + A +G S P Y S+K +L E
Sbjct: 117 LAHFWTTKAFLPAMTKN-NHGHIVTVASA-AGHVSVPFLLAYCSSKFAAVGFHKTLTDEL 174
Query: 199 --SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246
+ + V P V T + + ST + PE V L+
Sbjct: 175 AALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTL------EPEEVVNRLM 218
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 108 bits (272), Expect = 2e-28
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 21/213 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
T+G+G A+ EF G + +R+ + +++ ++ +
Sbjct: 16 GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-----------------GFQ 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
V G CD + +KL + F G +DI INN G KP L +T E+ +STN
Sbjct: 59 VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTN 117
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
L + ++ A +++ G IF AG +S ++Y +TK L QL +L E
Sbjct: 118 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--GSIYSATKGALNQLARNLACE 175
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231
+ + +P ++ T L + + K++
Sbjct: 176 WASDGIRANAVAPAVIATPLAEAVYDDEFKKVV 208
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 108 bits (271), Expect = 2e-28
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 27/200 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G+ + SG +VV +R++ + E
Sbjct: 13 AGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP---------------------G 51
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + D+ + +K A+ G +D+ +NNA +P L+ T E ++ S NL
Sbjct: 52 IEPVCVDLGDWDATEK----ALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNL 106
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
++ R M ++ G I N+ + + P Y STK + L ++ E
Sbjct: 107 RSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-TFPNLITYSSTKGAMTMLTKAMAMEL 165
Query: 200 KRSKVGVHTASPGMVLTDLL 219
K+ V++ +P +VLTD+
Sbjct: 166 GPHKIRVNSVNPTVVLTDMG 185
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 4e-28
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G + R F+ SG RVV+ + R EL
Sbjct: 14 GGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP---------------------G 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
I CDV + DV+ L + + FG +D +NNAG + + + + + Q++ NL
Sbjct: 53 AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNL 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+G+ T+ A+ +R G++ N+ G Y +TK + + +L +
Sbjct: 113 LGTYTLTKLALPYLRKS--QGNVINISSL-VGAIGQAQAVPYVATKGAVTAMTKALALDE 169
Query: 200 KRSKVGVHTASPGMVLTDLL 219
V V+ SPG + T L
Sbjct: 170 SPYGVRVNCISPGNIWTPLW 189
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 107 bits (269), Expect = 5e-28
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 21/201 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RG+G + E G V SR+ + + +T+ K
Sbjct: 16 GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-----------------GFK 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
V CD+ ++ Q+L N N F G ++I +NNAG +K +T E+ I+S N
Sbjct: 59 VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSIN 117
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ + A ++ +G +F +G+ P AVYG+TK + QL L E
Sbjct: 118 FEAAYHLSVLAHPFLKASERGNVVFISSVSGALA--VPYEAVYGATKGAMDQLTRCLAFE 175
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
+ + V+ PG++ T L+
Sbjct: 176 WAKDNIRVNGVGPGVIATSLV 196
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 107 bits (267), Expect = 6e-28
Identities = 52/234 (22%), Positives = 92/234 (39%), Gaps = 32/234 (13%)
Query: 20 STRGLGKALAREFLLSGDR-------VVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 72
+ +G+G+A+A EF + +V++SR++ + E
Sbjct: 9 AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE------------- 55
Query: 73 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 132
A I D+ + ADV++L+ V +G ID +NN F L T E+ +
Sbjct: 56 ----GALTDTITADISDMADVRRLTTHIVERYGHIDCLVNN-AGVGRFGALSDLTEEDFD 110
Query: 133 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 192
++TNL G+ T+ +M Q G F A + +++Y +K G R L
Sbjct: 111 YTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF--RHSSIYCMSKFGQRGLV 168
Query: 193 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246
++ +++ V + PG V T + M PE +A +V
Sbjct: 169 ETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMM-----PEDIAAPVV 217
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 107 bits (268), Expect = 7e-28
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 22/202 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
T G+G A+A +F+ G +V++ R S+ + +
Sbjct: 14 GTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------------------PDQ 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ D + KL + FG + +NNAG K + + T E ++++ NL
Sbjct: 56 IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNL 114
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G TR ++ M+++ G I NM G P Y ++K +R + S +
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSI-EGFVGDPSLGAYNASKGAVRIMSKSAALDC 173
Query: 200 --KRSKVGVHTASPGMVLTDLL 219
K V V+T PG + T L+
Sbjct: 174 ALKDYDVRVNTVHPGYIKTPLV 195
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 106 bits (266), Expect = 1e-27
Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 28/232 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RGLG AR+ + +G RVV+A E T EL +
Sbjct: 13 GARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD--------------------A 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
DV D Q++ +A EFGS+D +NNAG + G L + E ++V NL
Sbjct: 53 ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFRKVVEINL 111
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G + + + M+D GG I N+ A G LT+ YG++K G+R L E
Sbjct: 112 TGVFIGMKTVIPAMKDA-GGGSIVNISSAA-GLMGLALTSSYGASKWGVRGLSKLAAVEL 169
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII-----CELPETVARTLV 246
++ V++ PGM T + Q + + P +A +V
Sbjct: 170 GTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV 221
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 106 bits (266), Expect = 2e-27
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 17/201 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ G+G++ A F G +V + R+ + + T ++ AG ++K
Sbjct: 12 SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL--------KAGVPAEK------ 57
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN-KGFKPLLQFTNEEIEQIVSTN 138
+ + DV E + + N + +FG IDI +NNAG N E ++ N
Sbjct: 58 INAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN 117
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
I T++ G I N+ +G + Y K L Q +
Sbjct: 118 FQAVIEMTQKTK--EHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAID 175
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
+ V V++ SPG V T +
Sbjct: 176 LIQHGVRVNSVSPGAVATGFM 196
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 106 bits (265), Expect = 2e-27
Identities = 48/229 (20%), Positives = 92/229 (40%), Gaps = 20/229 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G+ A+ F+ G +VV+A + + + +
Sbjct: 14 GAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP------------------DV 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTN 138
++ + CDV + DV+ L + + + G +DI N G +L+ NE+ ++++ N
Sbjct: 56 ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN 115
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ G+ L + A RVM K G I S + ++ VY +TK + L SL E
Sbjct: 116 VYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTE 174
Query: 199 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247
+ V+ SP +V + LL + + ++ + + L
Sbjct: 175 LGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA 223
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 2e-27
Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 24/235 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+GKA+ +E L G VV+ASR E ++ EL+ NL A+
Sbjct: 20 GATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK------------QAR 67
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V I C++ +V L ++ FG I+ +NN G P +++ ++ TNL
Sbjct: 68 VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNL 126
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ + + G + + +G PL G+ + G+ L SL E
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---PLAVHSGAARAGVYNLTKSLALEW 183
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL--------PETVARTLV 246
S + ++ +PG++ + + + F + PE V+ +
Sbjct: 184 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC 238
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (259), Expect = 1e-26
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 27/203 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G+A A LL G +V + + E+ L E + K
Sbjct: 11 AAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ---------------K 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
I CDV + ++ V+ FG +DI +NNAG + E+ + NL
Sbjct: 56 TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV---------NNEKNWEKTLQINL 106
Query: 140 VGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL--QASLF 196
V I T + M Q G G I + +G VY ++K G+ A+L
Sbjct: 107 VSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA 166
Query: 197 KESKRSKVGVHTASPGMVLTDLL 219
S V ++ PG V T +L
Sbjct: 167 ANLMNSGVRLNAICPGFVNTAIL 189
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 102 bits (255), Expect = 1e-25
Identities = 47/199 (23%), Positives = 76/199 (38%), Gaps = 14/199 (7%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ GLG+A A F G VVV + G ++ + +
Sbjct: 15 AGGGLGRAYALAFAERGALVVVNDLG-----------GDFKGVGKGSSAADKVVEEIRRR 63
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ +KL A++ FG ID+ +NNAG + + ++E+ + I +L
Sbjct: 64 GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHL 122
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
GS TR A M+ Q G I A SG A Y + K GL L +L E
Sbjct: 123 RGSFQVTRAAWDHMKKQ-NYGRIIMTASA-SGIYGNFGQANYSAAKLGLLGLANTLVIEG 180
Query: 200 KRSKVGVHTASPGMVLTDL 218
+++ + +T +P
Sbjct: 181 RKNNIHCNTIAPNAGSRMT 199
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 101 bits (252), Expect = 1e-25
Identities = 48/230 (20%), Positives = 89/230 (38%), Gaps = 22/230 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ RG+G+ +A E G VVV SS + E + + G +
Sbjct: 14 AGRGIGRGIAIELGRRGASVVVNYGSSS-------KAAEEVVAELKKLGA---------Q 57
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
I D+ +P++V L + AV+ FG +D ++N+G + L+ T E +++ + N
Sbjct: 58 GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNT 116
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G ++ ++ R +GG I + + P A+Y +K + + +
Sbjct: 117 RGQFFVAQQGLKHCR---RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDC 173
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249
V V+ +PG V TD+ S + E + L
Sbjct: 174 GAKGVTVNCIAPGGVKTDMFDENS--WHYAPGGYKGMPQEKIDEGLANMN 221
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 100 bits (250), Expect = 3e-25
Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 28/234 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
GLG+AL F+ G +V V +S+E + T+ +N
Sbjct: 13 GASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN-------------------- 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE----QIV 135
V GI DV D ++ ++ V FG ID I NAG L+ E ++ ++
Sbjct: 53 VLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVF 112
Query: 136 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
N+ G I + + + +G IF + AG + +Y + K + L L
Sbjct: 113 HINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPN--GGGPLYTAAKHAIVGLVREL 169
Query: 196 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249
E V V+ G + +DL S + + + + + R+
Sbjct: 170 AFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRM 222
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 100 bits (249), Expect = 4e-25
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+T G+G +AR G RV V +R E +R T+ EL E +
Sbjct: 10 ATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-----------------GVE 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G CDV +++ L V +G +D+ +NNAG G + +E +V TNL
Sbjct: 53 ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNL 111
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G T++ ++ +G + G A Y ++K G+ +L E
Sbjct: 112 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 171
Query: 200 KRSKVGVHTASPGMVLTDLL 219
R+ + V+ PG V T +
Sbjct: 172 ARTGITVNAVCPGFVETPMA 191
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 100 bits (249), Expect = 4e-25
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
GLG+A A G ++ + SSE + + + E + +
Sbjct: 12 GGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA---------------E 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V DV + A V+ FG ID + NNAG P FT E +++VS NL
Sbjct: 57 VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 116
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G L + +++MR+Q G + G G + Y + K G+ L + E
Sbjct: 117 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--GNQSGYAAAKHGVVGLTRNSAVEY 174
Query: 200 KRSKVGVHTASPGMVLTDLL 219
R + ++ +PG + T ++
Sbjct: 175 GRYGIRINAIAPGAIWTPMV 194
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 99.7 bits (248), Expect = 4e-25
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+RGLG +A+ +G VVVASR+ E +L E +
Sbjct: 13 GSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY----------------GVE 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
CDV +V+KL +FG +D +N AG N+ P +F +E Q++ NL
Sbjct: 57 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNL 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ REA ++R+ I + P + Y ++K G+ L +L KE
Sbjct: 116 FGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-TMPNISAYAASKGGVASLTKALAKEW 174
Query: 200 KRSKVGVHTASPGMVLTDLL 219
R + V+ +PG T +
Sbjct: 175 GRYGIRVNVIAPGWYRTKMT 194
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 99.7 bits (248), Expect = 5e-25
Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 26/202 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G + + L G +V + + + + EL E +
Sbjct: 14 GASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE--------------------R 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV AD + G++++ +NNAG + E+ +++ N
Sbjct: 54 SMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINT 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE- 198
+ ++ + M++ GG I NM S A Y ++K + L +
Sbjct: 113 ESVFIGCQQGIAAMKET--GGSIINMASV-SSWLPIEQYAGYSASKAAVSALTRAAALSC 169
Query: 199 -SKRSKVGVHTASPGMVLTDLL 219
+ + V++ P + T ++
Sbjct: 170 RKQGYAIRVNSIHPDGIYTPMM 191
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 99.3 bits (247), Expect = 6e-25
Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 35/236 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G +RE + + V E+ L E
Sbjct: 13 ALGGIGLDTSRELVKRNLKNFVILDRVEN--------PTALAELKAINPK--------VN 56
Query: 80 VAGIACDVCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
+ DV P A+ +KL ++ ++DI IN AG + +IE+ ++ N
Sbjct: 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQIERTIAIN 107
Query: 139 LVGSILCTREAMR--VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
G + T + R GG I N+ +G ++ VY ++K + SL
Sbjct: 108 FTGLVNTTTAILDFWDKRKGGPGGIIANICSV-TGFNAIHQVPVYSASKAAVVSFTNSLA 166
Query: 197 KESKRSKVGVHTASPGMVLTDLLLSGSTIQN------KQMFNIICELPETVARTLV 246
K + + V ++ +PG+ T L+ + ++ + + + + + E + V
Sbjct: 167 KLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV 222
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.8 bits (243), Expect = 2e-24
Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 27/199 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G+ + +G RVV SR+ + V E
Sbjct: 15 AGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP---------------------G 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + D+ + ++ A+ G +D+ +NNA +P L+ T E ++ NL
Sbjct: 54 IEPVCVDLGDWEATER----ALGSVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNL 108
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
I ++ R + + G I N+ + +VY STK L L + E
Sbjct: 109 RAVIQVSQIVARGLIARGVPGAIVNVSSQC-SQRAVTNHSVYCSTKGALDMLTKVMALEL 167
Query: 200 KRSKVGVHTASPGMVLTDL 218
K+ V+ +P +V+T +
Sbjct: 168 GPHKIRVNAVNPTVVMTSM 186
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 97.8 bits (243), Expect = 2e-24
Identities = 45/231 (19%), Positives = 79/231 (34%), Gaps = 30/231 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+A F G R+V +R +
Sbjct: 13 AAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----------------------G 50
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV +PA V++ A+ G +D ++ AG + E+ E ++ NL
Sbjct: 51 AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNL 109
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
GS L + A MR++ G + A A Y ++ G+ L +L E
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLT---ASRVYLGNLGQANYAASMAGVVGLTRTLALEL 166
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 246
R + V+T +PG + T + ++ P VA +
Sbjct: 167 GRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAAL 217
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.4 bits (239), Expect = 1e-23
Identities = 51/272 (18%), Positives = 100/272 (36%), Gaps = 34/272 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+++G+G+ +A G VVV +RS E+++ V+ E L A
Sbjct: 22 ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE----------------LGAAS 65
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
IA + + ++ A G +D+ I N TN L + + + N
Sbjct: 66 AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNF 124
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE- 198
+ ++ T A+ +++ G I + + +G + P+ A Y ++K L +S+ KE
Sbjct: 125 LSYVVLTVAALPMLKQ--SNGSIVVV-SSLAGKVAYPMVAAYSASKFALDGFFSSIRKEY 181
Query: 199 -SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR-----VV 252
R V + G++ T+ + + ++ E A ++ V
Sbjct: 182 SVSRVNVSITLCVLGLIDTETAMK----AVSGIVHMQAAPKEECALEIIKGGALRQEEVY 237
Query: 253 KGSGKAINYLT---PPRILLALVTAWLRRGRW 281
S L +IL L + R+
Sbjct: 238 YDSSLWTTLLIRNPSRKILEFLYSTSYNMDRF 269
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 95.9 bits (238), Expect = 1e-23
Identities = 45/206 (21%), Positives = 68/206 (33%), Gaps = 23/206 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G A R +G V V RS+ ++ + K
Sbjct: 17 GNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG----------------VK 60
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
CDV V K + G I I NAG + KP + T+E+ + N+
Sbjct: 61 TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNV 119
Query: 140 VGSILCTREAMRVMRDQPKGGHIFN------MDGAGSGGSSTPLTAVYGSTKCGLRQLQA 193
G R ++ + + G I S + + Y S+K L
Sbjct: 120 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 179
Query: 194 SLFKESKRSKVGVHTASPGMVLTDLL 219
L E + + V+ SPG V TD
Sbjct: 180 GLAAEWASAGIRVNALSPGYVNTDQT 205
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 95.6 bits (237), Expect = 2e-23
Identities = 45/231 (19%), Positives = 84/231 (36%), Gaps = 20/231 (8%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G A A G + + + E++ + E +
Sbjct: 13 AGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-----------------GVE 55
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
CDV V + V +FG ID NNAG F P+ + +++ ++++ N+
Sbjct: 56 ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ + R M Q G + AG G P A YG++K + L + +
Sbjct: 116 TGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALTETAALDL 173
Query: 200 KRSKVGVHTASPGMVLTDLLLSGST-IQNKQMFNIICELPETVARTLVPRI 249
+ V+ SPG + + +Q K P+ VA+ ++ +
Sbjct: 174 APYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 94.5 bits (234), Expect = 3e-23
Identities = 35/248 (14%), Positives = 76/248 (30%), Gaps = 47/248 (18%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ RG+G L ++ + + + + + + E E K++ ++
Sbjct: 11 ANRGIGLGLVQQLVKDKNIRHIIATARD---------VEKATE---------LKSIKDSR 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGS--IDIWINNAGTNKGFKPLLQFTNEEIEQIVST 137
V + V + + GS + + INNAG + + I + +
Sbjct: 53 VHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV 112
Query: 138 NLVGSILCTREAMRVMRDQPKGGHI----------------FNMDGAGSGGSSTPLTAVY 181
N +L T++ + ++++ + GS+ Y
Sbjct: 113 NTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAY 172
Query: 182 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241
+K + +L + K V V PG V T+L + + E
Sbjct: 173 RMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALT-----------VEQS 221
Query: 242 ARTLVPRI 249
L+
Sbjct: 222 TAELISSF 229
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 93.9 bits (233), Expect = 5e-23
Identities = 28/200 (14%), Positives = 55/200 (27%), Gaps = 25/200 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G A +G V S + + +E L
Sbjct: 8 VKHFGGMGSALRLSEAGHTVACHDESFK-------QKDE----------------LEAFA 44
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ +L + +G +D+ ++N F+P+ ++ E+ V
Sbjct: 45 ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQ 104
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ M+ + G IF + Y S + G L +L KE
Sbjct: 105 IRPFALVNAVASQMKKRKSGHIIFITSATPF--GPWKELSTYTSARAGACTLANALSKEL 162
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ V P + ++
Sbjct: 163 GEYNIPVFAIGPNYLHSEDS 182
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.2 bits (220), Expect = 4e-21
Identities = 42/241 (17%), Positives = 82/241 (34%), Gaps = 60/241 (24%)
Query: 20 STRGLGKALAREFL-LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 78
+G+G A+ R+ L VV+ +R + V +L+
Sbjct: 11 GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----------------GL 53
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
D+ + ++ L +F E+G +D+ +NNAG + + E + TN
Sbjct: 54 SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA-FKVADPTPFHIQAEVTMKTN 112
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA------------------- 179
G+ E + +++ Q + ++ ++ + S +P
Sbjct: 113 FFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNK 172
Query: 180 ------------------VYGSTKCGL----RQLQASLFKESKRSKVGVHTASPGMVLTD 217
YG TK G+ R L ++ K K+ ++ PG V TD
Sbjct: 173 FVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 232
Query: 218 L 218
+
Sbjct: 233 M 233
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 88.7 bits (219), Expect = 4e-21
Identities = 49/234 (20%), Positives = 86/234 (36%), Gaps = 18/234 (7%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
ST G+G +A G +V+ E ++ G+ A G K
Sbjct: 12 STSGIGLGIATALAAQGADIVLNGFGDA-------AEIEKVRAGLAAQHG--------VK 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V D+ + V+ L + AV + G IDI +NN + + F E+ + I++ NL
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNN-AGIQHTALIEDFPTEKWDAILALNL 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
T A+ M+ Q G I N+ A G ++ + Y + K G+ E+
Sbjct: 116 SAVFHGTAAALPHMKKQ-GFGRIINIASA-HGLVASANKSAYVAAKHGVVGFTKVTALET 173
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVK 253
+ + PG V T L+ + ++ + P ++ V
Sbjct: 174 AGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVT 227
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 88.6 bits (219), Expect = 5e-21
Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 21/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+GK +A F +G VVV+ ++++ V E++ GG +
Sbjct: 19 AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ--------QLGG---------Q 61
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
CD+ ++ L++FA+++ G +DI +NNAG + + N+
Sbjct: 62 AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNV 119
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
++ + + GG + + + + Y S+K L ++ +
Sbjct: 120 FSFFHLSQ--LVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDL 177
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ V+ +PG +LTD L
Sbjct: 178 GEKNIRVNGIAPGAILTDAL 197
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 87.8 bits (217), Expect = 8e-21
Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 26/200 (13%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G+A F G +V R + V LE A+
Sbjct: 13 AASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--------------------AE 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV +P V+ + A+ EFG + + AG E E+++ NL
Sbjct: 53 AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNL 111
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
GS L R+A V+ + ++ G G+ G A Y + K G+ L +L E
Sbjct: 112 TGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG-----LAHYAAGKLGVVGLARTLALEL 166
Query: 200 KRSKVGVHTASPGMVLTDLL 219
R V V+ PG++ T +
Sbjct: 167 ARKGVRVNVLLPGLIQTPMT 186
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 88.3 bits (218), Expect = 9e-21
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 20/200 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ RG+G+ +A E G +V+V +S E E + + G
Sbjct: 26 AGRGIGREMAMELGRRGCKVIVNYANST-------ESAEEVVAAIKKNGS---------D 69
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
A + +V D+ ++ AV FG +DI +N+G F + T EE +++ + N
Sbjct: 70 AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINT 128
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G REA + + G + M + P AVY +K + + +
Sbjct: 129 RGQFFVAREAYKHLEIG---GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 185
Query: 200 KRSKVGVHTASPGMVLTDLL 219
K+ V+ +PG + TD+
Sbjct: 186 ADKKITVNVVAPGGIKTDMY 205
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 86.7 bits (214), Expect = 2e-20
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S+ GLGK++A F +VVV RS E + ++ E + GG +
Sbjct: 15 SSTGLGKSMAIRFATEKAKVVVNYRSKE-------DEANSVLEEIKKVGG---------E 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV +DV L A+ EFG +D+ INNAG + + + +++ TNL
Sbjct: 59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNL 117
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ L +REA++ + G + NM PL Y ++K G++ + +L E
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSS-VHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ V+ PG + T +
Sbjct: 177 APKGIRVNNIGPGAINTPIN 196
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 85.9 bits (212), Expect = 4e-20
Identities = 51/227 (22%), Positives = 85/227 (37%), Gaps = 24/227 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G + R + G +VV E + EL +
Sbjct: 14 GARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD--------------------A 53
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV +PA + + AV FG + + +NNAG + + E ++I+ NL
Sbjct: 54 ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNL 112
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G L R ++ M++ +G I G + T Y +TK +R L S E
Sbjct: 113 TGVFLGIRAVVKPMKEAGRGSIINISS--IEGLAGTVACHGYTATKFAVRGLTKSTALEL 170
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246
S + V++ PG+V T + + E P V+ +V
Sbjct: 171 GPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAE-PVEVSNLVV 216
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 84.5 bits (208), Expect = 1e-19
Identities = 46/245 (18%), Positives = 79/245 (32%), Gaps = 35/245 (14%)
Query: 20 STRGLGKALAREF---LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 76
++RG G+ALA + L G ++V++RS +R EL +
Sbjct: 14 ASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL------------- 60
Query: 77 HAKVAGIACDVCEPADVQK----LSNFAVNEFGSIDIWINNA--GTNKGFKPLLQFTNEE 130
KV A D+ A VQ+ + E + INNA + L E
Sbjct: 61 --KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAE 118
Query: 131 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 190
+ + NL + T + +D P + +Y + K
Sbjct: 119 VNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDM 178
Query: 191 LQASLFKESKRSKVGVHTASPGMVLTDLL----LSGSTIQNKQMFNIICEL-----PETV 241
L L E V V + +PG + D+ + + + + T
Sbjct: 179 LYQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTS 236
Query: 242 ARTLV 246
A+ L+
Sbjct: 237 AQKLL 241
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 84.4 bits (208), Expect = 2e-19
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 21/201 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++G+G A+ E G RV SR+ + + + E
Sbjct: 14 GSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-----------------GLN 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
V G CD+ + KL + F G ++I +NNA K FT ++ I+ TN
Sbjct: 57 VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA-GVVIHKEAKDFTEKDYNIIMGTN 115
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 198
+ ++ A +++ G IF AG + ++Y ++K + Q+ SL E
Sbjct: 116 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV--SLYSASKGAINQMTKSLACE 173
Query: 199 SKRSKVGVHTASPGMVLTDLL 219
+ + V++ +PG++LT L+
Sbjct: 174 WAKDNIRVNSVAPGVILTPLV 194
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 83.7 bits (206), Expect = 2e-19
Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 27/231 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A G +V+ + S + L A
Sbjct: 12 ASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--------------------AN 51
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
G+ +V +PA ++ + EFG +DI +NNAG + ++ +EE I+ TNL
Sbjct: 52 GKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKDEEWNDIIETNL 110
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
++ MR M + + G I + G+ G A Y + K GL SL +E
Sbjct: 111 SSVFRLSKAVMRAMMKK-RHGRIITI-GSVVGTMGNGGQANYAAAKAGLIGFSKSLAREV 168
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 246
+ V+ +PG + TD+ + S Q + + + +A +
Sbjct: 169 ASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVA 219
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 82.8 bits (204), Expect = 6e-19
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 24/231 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ RG+G+ +A+ S V+ SR+ +S V E++ + G +
Sbjct: 18 AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK--------SFGY---------E 60
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+G A DV + ++ ++ N + E ++DI +NNAG + L+ N+E E ++ TNL
Sbjct: 61 SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLF-LRMKNDEWEDVLRTNL 119
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
T+ + M + + G I N+ + G + A Y S+K G+ SL KE
Sbjct: 120 NSLFYITQPISKRMINN-RYGRIINI-SSIVGLTGNVGQANYSSSKAGVIGFTKSLAKEL 177
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 246
+ V+ +PG + +D+ S K + + I PE VA
Sbjct: 178 ASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLAC 228
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 82.1 bits (202), Expect = 1e-18
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 23/231 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+GKA+A +G +V+V S + E + + + A GG +
Sbjct: 9 ASRGIGKAIALSLGKAGCKVLVNYARSA-------KAAEEVSKQIEAYGG---------Q 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
DV + ADV+ + A++ +G+ID+ +NNAG + ++ + ++++ NL
Sbjct: 53 AITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLL-IRMKKSQWDEVIDLNL 111
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G LCT+ A ++M + + G I N+ + G A Y + K G+ + +E
Sbjct: 112 TGVFLCTQAATKIMMKK-RKGRIINI-ASVVGLIGNIGQANYAAAKAGVIGFSKTAAREG 169
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 246
+ V+ PG + +D+ K++ I PE VA +
Sbjct: 170 ASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVE 220
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 82.2 bits (202), Expect = 1e-18
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S RG+G+A A ++ G RV +A + E+ R T E+
Sbjct: 13 SARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--------------------GPA 52
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
IA DV + A + + ++ +GSIDI +NN P+++ T E +++ + N+
Sbjct: 53 ACAIALDVTDQASIDRCVAELLDRWGSIDILVNN-AALFDLAPIVEITRESYDRLFAINV 111
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G++ + R M +GG I NM G L VY +TK + L S
Sbjct: 112 SGTLFMMQAVARAMIAGGRGGKIINMASQA-GRRGEALVGVYCATKAAVISLTQSAGLNL 170
Query: 200 KRSKVGVHTASPGMVLTDLL 219
R + V+ +PG+V +
Sbjct: 171 IRHGINVNAIAPGVVDGEHW 190
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 81.8 bits (201), Expect = 2e-18
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 19/200 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+GKA+A + G V +A + + + +E+ AGG
Sbjct: 9 AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN--------QAGG---------H 51
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ DV + V A G D+ +NNAG P+ T E ++++ + N+
Sbjct: 52 AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINV 110
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G I + A+ + + GG I N +G P AVY S+K +R L + ++
Sbjct: 111 KGVIWGIQAAVEAFKKEGHGGKIINACS-QAGHVGNPELAVYSSSKFAVRGLTQTAARDL 169
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ V+ PG+V T +
Sbjct: 170 APLGITVNGYCPGIVKTPMW 189
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 80.7 bits (198), Expect = 4e-18
Identities = 40/221 (18%), Positives = 63/221 (28%), Gaps = 26/221 (11%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
R +G ++A G RVVV R SE + L + AA S
Sbjct: 9 GARRIGHSIAVRLHQQGFRVVVHYRHSE-------GAAQRLVAELNAARAGS----AVLC 57
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST-- 137
++ + + + + FG D+ +NNA PLL +
Sbjct: 58 KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP-TPLLPGDDTNGAADAKPID 116
Query: 138 ---------NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS---STPLTAVYGSTK 185
N V + R R + P VY K
Sbjct: 117 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAK 176
Query: 186 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 226
L L + E + V+ +PG+ L + T +
Sbjct: 177 HALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 217
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 80.6 bits (198), Expect = 7e-18
Identities = 44/198 (22%), Positives = 72/198 (36%), Gaps = 18/198 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
GLGK + G + V+ASR + ++ T ++ K
Sbjct: 33 GGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN----------------K 76
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
V I CDV +P VQ + + G +I INNA N P + + + I L
Sbjct: 77 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVL 135
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ T E + + KG ++ + S + S K G+ + SL E
Sbjct: 136 NGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP-SASAKAGVEAMSKSLAAEW 194
Query: 200 KRSKVGVHTASPGMVLTD 217
+ + + PG + T
Sbjct: 195 GKYGMRFNVIQPGPIKTK 212
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.9 bits (196), Expect = 1e-17
Identities = 49/294 (16%), Positives = 83/294 (28%), Gaps = 46/294 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ G+G LA + + ++ T L E + G
Sbjct: 10 CSSGIGLHLAVRLASDPSQSFKVYATLRDLK-TQGRLWEAARALACPPG----------S 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + DV + V + PL + + ++ N+
Sbjct: 59 LETLQLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASVLDVNV 115
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
VG++ + + M+ + G + G G P VY ++K L L SL
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL--PFNDVYCASKFALEGLCESLAVLL 173
Query: 200 KRSKVGVHTASPGMVLTDLL---------------------LSGSTIQNKQMFNIICELP 238
V + G V T + +KQ+F + P
Sbjct: 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNP 233
Query: 239 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAA 292
E VA + ++ + Y T R L LR R D G A
Sbjct: 234 EEVAEVFL---TALRAPKPTLRYFTTERFL-----PLLRM-RLDDPSGSNYVTA 278
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 77.8 bits (191), Expect = 3e-17
Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 35/200 (17%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
++RG+G+A+A G V + +R+ EE LK
Sbjct: 12 ASRGIGRAVADVLSQEGAEVTICARN-----------EELLKR----------------- 43
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+G VC D++K + + +DI + NAG K + TNE+ ++ + +
Sbjct: 44 -SGHRYVVC---DLRKDLDLLFEKVKEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLF 98
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ I R + M+++ G + + S + L +L E
Sbjct: 99 LNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP--IENLYTSNSARMALTGFLKTLSFEV 156
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ V+ +PG T+ +
Sbjct: 157 APYGITVNCVAPGWTETERV 176
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.3 bits (187), Expect = 1e-16
Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 28/200 (14%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ +G+G+A A F G +V+ + E L+E K
Sbjct: 14 AAQGIGQAAALAFAREGAKVIATDIN-----------ESKLQE--------------LEK 48
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
GI V + +++ F NE +D+ N AG +L ++ + ++ N+
Sbjct: 49 YPGIQTRVLDVTKKKQIDQF-ANEVERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNV 106
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
L + + M Q G+I NM S VY +TK + L S+ +
Sbjct: 107 RSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADF 165
Query: 200 KRSKVGVHTASPGMVLTDLL 219
+ + + PG V T L
Sbjct: 166 IQQGIRCNCVCPGTVDTPSL 185
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 74.4 bits (182), Expect = 5e-16
Identities = 47/231 (20%), Positives = 87/231 (37%), Gaps = 35/231 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
RG+G A+A+ G +V V R S +
Sbjct: 15 GNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------------KG 46
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ G+ DV + V + G +++ ++NA L++ T E+ E++++ NL
Sbjct: 47 LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA-GLSADAFLMRMTEEKFEKVINANL 105
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
G+ + A R M+ G IF +G G A Y ++K G+ + S+ +E
Sbjct: 106 TGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ--ANYAASKAGVIGMARSIAREL 163
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 246
++ V + +PG + TD+ + + I P VA +
Sbjct: 164 SKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVS 214
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 66.7 bits (161), Expect = 3e-13
Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 35/216 (16%)
Query: 20 STRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 76
RGLG L + L + R+ E + ELE+ K
Sbjct: 10 CNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK----ELEDLAKNHSN----------- 54
Query: 77 HAKVAGIACDVCEPADVQK--LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 134
+ + D+ K V + +++ NNAG + ++E+
Sbjct: 55 ---IHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDT 111
Query: 135 VSTNLVGSILCTREAMRVMRDQPKGG------------HIFNMDGAGSGGSSTPLTAVYG 182
+ TN V I+ + + +++ K + G++ Y
Sbjct: 112 LQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYR 171
Query: 183 STKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218
++K L SL + ++ + PG V TD+
Sbjct: 172 TSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 62.6 bits (151), Expect = 6e-12
Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 25/198 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ R LG A+A + +G V ++ ++ L ++ A GG+
Sbjct: 18 NQRSLGFAIAAKLKEAGAEVALSYQAER--------LRPEAEKLAEALGGALLFR----- 64
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVS 136
DV + ++ L FG +D ++ + ++ +
Sbjct: 65 -----ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE 119
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 196
+ + R A ++ +GG I + + P V K L L
Sbjct: 120 VSAYSLVAVARRAEPLL---REGGGIVTL-TYYASEKVVPKYNVMAIAKAALEASVRYLA 175
Query: 197 KESKRSKVGVHTASPGMV 214
E V V+ S G V
Sbjct: 176 YELGPKGVRVNAISAGPV 193
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.5 bits (148), Expect = 1e-11
Identities = 35/205 (17%), Positives = 62/205 (30%), Gaps = 21/205 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
GLG A A + G V+ + +L N
Sbjct: 13 GASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA-------------- 58
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + A F + I A K T E+ ++++ NL
Sbjct: 59 -DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 117
Query: 140 VGSILCTREAMRVMRDQ-----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 194
+G+ R M + G I N + + A Y ++K G+ +
Sbjct: 118 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINT-ASVAAFEGQVGQAAYSASKGGIVGMTLP 176
Query: 195 LFKESKRSKVGVHTASPGMVLTDLL 219
+ ++ + V T +PG+ T LL
Sbjct: 177 IARDLAPIGIRVMTIAPGLFGTPLL 201
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 61.4 bits (148), Expect = 2e-11
Identities = 48/240 (20%), Positives = 77/240 (32%), Gaps = 44/240 (18%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
GLG+A A G RVVV E
Sbjct: 9 GASGLGRAAALALKARGYRVVVLDLRREG-----------------------------ED 39
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL---LQFTNEEIEQIVS 136
+ + DV DV++ + E + ++ AG K L E +++
Sbjct: 40 LIYVEGDVTREEDVRR-AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLE 98
Query: 137 TNLVGSILCTREAMRVMRDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 191
NL+G+ R A MR+ P + G I N + + A Y ++K G+ L
Sbjct: 99 VNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNT-ASVAAFEGQIGQAAYAASKGGVVAL 157
Query: 192 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-----PETVARTLV 246
+E + V T +PG+ T LL + + PE A ++
Sbjct: 158 TLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVL 217
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 60.6 bits (146), Expect = 2e-11
Identities = 27/200 (13%), Positives = 51/200 (25%), Gaps = 31/200 (15%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
LG + F V + +
Sbjct: 10 GRGALGSRCVQAFRARNWWVASIDVVEN-------------------------EEASASV 44
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
+ + E AD + +D + AG G + + + + ++
Sbjct: 45 IVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSI 104
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE- 198
S + + A + +++ GA + TP YG K + QL SL +
Sbjct: 105 WTSTISSHLATKHLKEGGLLTLA----GAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKN 160
Query: 199 -SKRSKVGVHTASPGMVLTD 217
S P + T
Sbjct: 161 SGMPSGAAAIAVLPVTLDTP 180
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 60.3 bits (145), Expect = 3e-11
Identities = 28/202 (13%), Positives = 56/202 (27%), Gaps = 35/202 (17%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
LG A+ F +G V+ S+
Sbjct: 10 GKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------------------DS 42
Query: 80 VAGIACDVCEPADVQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 137
+ + Q + + + +D AG G + + + ++
Sbjct: 43 NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQ 102
Query: 138 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 197
++ S + + A ++ + + GA + TP YG K + L +SL
Sbjct: 103 SVWSSAIAAKLATTHLKPG----GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAA 158
Query: 198 E--SKRSKVGVHTASPGMVLTD 217
+ V T P + T
Sbjct: 159 KDSGLPDNSAVLTIMPVTLDTP 180
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 59.3 bits (142), Expect = 1e-10
Identities = 23/181 (12%), Positives = 48/181 (26%), Gaps = 8/181 (4%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL--EENLKEGMMAAGGSSKKNLVH 77
+ + LG+++A G V + S + ++ + S
Sbjct: 10 AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAP 69
Query: 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI--- 134
A + V +L +G D+ +NNA + PLL+ + E
Sbjct: 70 VSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGD 128
Query: 135 --VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 192
+ + + + G + + + V T L
Sbjct: 129 REAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYT 188
Query: 193 A 193
Sbjct: 189 I 189
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 55.3 bits (131), Expect = 3e-09
Identities = 27/215 (12%), Positives = 63/215 (29%), Gaps = 20/215 (9%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
T G G +A+E +++ M+ L
Sbjct: 12 DTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLP 71
Query: 80 VA---------------GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPL 123
++ + ++ ++N ++G I++ +++ K K L
Sbjct: 72 FDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDL 131
Query: 124 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGS 183
L + + +S + I + + +M+ Q I ++ S S
Sbjct: 132 LNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQS---SIISLTYHASQKVVPGYGGGMSS 188
Query: 184 TKCGLRQLQASLFKE-SKRSKVGVHTASPGMVLTD 217
K L L + + ++T S G + +
Sbjct: 189 AKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 50.3 bits (119), Expect = 8e-08
Identities = 28/202 (13%), Positives = 60/202 (29%), Gaps = 26/202 (12%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
S + +A+ G + ++ +L+ ++E G
Sbjct: 15 SKLSIAYGIAQAMHREGAELAFTYQND--------KLKGRVEEFAAQLG----------S 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP----LLQFTNEEIEQIV 135
+ CDV E A + + + D ++++ G G + + T E +
Sbjct: 57 DIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH 116
Query: 136 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
+ + + ++ G + + G + P V G K L +
Sbjct: 117 DISSYSFVAMAKACRSML---NPGSALLTLSYLG-AERAIPNYNVMGLAKASLEANVRYM 172
Query: 196 FKESKRSKVGVHTASPGMVLTD 217
V V+ S G + T
Sbjct: 173 ANAMGPEGVRVNAISAGPIRTL 194
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 48.0 bits (113), Expect = 5e-07
Identities = 15/147 (10%), Positives = 36/147 (24%), Gaps = 43/147 (29%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
G+G A + +G ++V V
Sbjct: 9 CATGIGAATRKVLEAAGHQIVGIDIRDAEV------------------------------ 38
Query: 80 VAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
D+ ++ + + +D + AG L + + +VS N
Sbjct: 39 ----IADLSTAEGRKQAIADVLAKCSKGMDGLVLCAG--------LGPQTKVLGNVVSVN 86
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNM 165
G+ + ++ + +
Sbjct: 87 YFGATELMDAFLPALKKGHQPAAVVIS 113
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 46.2 bits (108), Expect = 1e-06
Identities = 23/194 (11%), Positives = 44/194 (22%), Gaps = 20/194 (10%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T LGK LA G +VV SR E E + +
Sbjct: 9 TGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI--------------- 53
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ A+ ++ + +ID + + K ++
Sbjct: 54 --TGMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYS 110
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
V+ + + + A + CG +
Sbjct: 111 SERSAAEIVAEVLESEKVVSALHTIPAARFAN--LDEKFDWDVPVCGDDDESKKVVMSLI 168
Query: 201 RSKVGVHTASPGMV 214
G+ G +
Sbjct: 169 SEIDGLRPLDAGPL 182
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 45.7 bits (107), Expect = 2e-06
Identities = 13/119 (10%), Positives = 24/119 (20%), Gaps = 14/119 (11%)
Query: 77 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 136
KV A + + A + L + S
Sbjct: 70 RFKVNVTAAETADDASRAEA-------VKGAHFVFTAGAI-----GLELLPQAAWQNESS 117
Query: 137 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 195
+V D G + G + G+ + + +L S
Sbjct: 118 IEIVADYNAQPPLGIGGIDATDKGKEYG--GKRAFGALGIGGLKLKLHRACIAKLFESS 174
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 45.5 bits (106), Expect = 4e-06
Identities = 28/233 (12%), Positives = 59/233 (25%), Gaps = 25/233 (10%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 79
+ + + +A+ G + +ES+ V + +
Sbjct: 15 NNKSIAYGIAQSCFNQGATLAFTYL-NESLEKRVRPIAQE-----------------LNS 56
Query: 80 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 139
DV + + L N + GS+D +++ +
Sbjct: 57 PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAME 116
Query: 140 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 199
+ + G + + GS V G K L L +
Sbjct: 117 ISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-YNVMGLAKAALESAVRYLAVDL 175
Query: 200 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE------LPETVARTLV 246
+ + V+ S G + T + + +N I E V +
Sbjct: 176 GKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGM 228
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 41.3 bits (95), Expect = 9e-05
Identities = 23/168 (13%), Positives = 49/168 (29%), Gaps = 1/168 (0%)
Query: 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL-KEGMMAAGGSSKKNLVHA 78
G G A+A+ +G ++V + + + ++ G + V+
Sbjct: 18 DDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYP 77
Query: 79 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 138
A P DV+ +A + ++ + G +L + ++
Sbjct: 78 LDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPL 137
Query: 139 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 186
L S A+ + GG+S LT +
Sbjct: 138 LETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 38.5 bits (88), Expect = 7e-04
Identities = 29/226 (12%), Positives = 50/226 (22%), Gaps = 25/226 (11%)
Query: 21 TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80
T G+G +AR G ++ S EL L+
Sbjct: 18 TGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA--------------- 62
Query: 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLV 140
+ +A + T E IE+ ++
Sbjct: 63 RTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVL 122
Query: 141 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK 200
G+ + F + + + P Y L L +
Sbjct: 123 GARNLHE------LTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGL 176
Query: 201 RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246
+ G + G + +I PET R L
Sbjct: 177 P----ATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQ 218
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 347 | |||
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.98 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.8 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.72 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.7 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.65 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.65 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.64 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.62 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.58 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.58 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.54 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.52 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.52 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.52 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.51 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.5 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.49 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.47 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.46 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.45 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.43 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.43 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.42 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.4 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.29 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.25 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.13 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.11 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.09 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 99.04 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.03 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.88 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 98.76 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.09 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.06 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.99 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.93 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.88 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.88 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.87 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.86 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.86 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.81 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.75 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.75 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.72 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.64 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.61 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.58 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.53 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.49 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.49 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.48 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.44 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.38 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.31 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.25 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.23 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.22 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.21 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.18 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.15 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.13 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.12 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.11 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.1 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.09 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.08 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.06 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.04 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.03 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 97.02 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.01 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.01 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.99 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.98 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.96 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.95 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.93 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.93 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.88 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.84 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.81 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.76 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.7 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.66 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.65 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.63 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.62 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.61 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.55 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.51 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.51 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.47 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.4 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.36 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.35 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.14 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.07 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 96.01 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.01 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.77 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.43 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.16 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 95.13 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 95.08 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 95.01 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 94.78 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.64 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 94.57 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.36 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 94.33 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.21 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.12 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 93.64 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 93.59 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.48 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 93.37 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 93.26 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.2 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 93.14 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 93.08 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 93.07 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 93.05 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 92.92 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 92.8 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 92.79 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 92.68 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 92.58 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 92.57 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 92.54 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 92.52 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 92.44 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 92.36 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 92.34 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 92.34 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.29 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 92.29 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 92.23 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.14 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 92.12 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 91.97 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 91.88 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 91.84 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 91.83 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 91.82 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 91.66 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 91.38 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 91.37 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 91.07 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 90.93 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 90.91 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 90.83 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 90.78 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 90.76 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 90.69 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 90.66 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 90.6 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 90.56 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 90.43 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 90.29 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 90.0 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 89.86 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 89.71 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 89.71 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 89.6 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 89.49 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 89.47 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 89.41 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 89.31 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 89.24 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 89.01 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 89.0 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 89.0 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 88.67 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 88.6 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 88.58 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 88.57 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 88.39 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 88.25 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 88.19 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 87.98 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 87.7 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 87.7 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 87.59 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 87.4 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 87.3 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 86.97 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 86.73 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 86.72 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 86.03 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 85.97 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 85.16 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 85.15 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 85.11 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 84.97 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 84.95 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 83.91 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 83.91 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 83.83 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 83.68 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 83.6 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 83.33 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 83.33 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 83.32 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 83.27 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 82.89 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 82.83 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 82.66 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 82.48 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 82.32 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 82.02 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 82.0 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 82.0 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 81.47 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 81.27 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 81.05 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 80.92 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 80.91 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 80.32 |
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3e-51 Score=368.61 Aligned_cols=251 Identities=20% Similarity=0.301 Sum_probs=218.9
Q ss_pred CCCCCCCcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 019009 1 MYSDNDEHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV 80 (347)
Q Consensus 1 ~~~~~~~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (347)
||.+++-+ ..||++|||||++|||+++|++|+++|++|++++|++++++++.+++++ .+.++
T Consensus 1 m~~~d~m~-L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~-----------------~g~~~ 62 (255)
T d1fmca_ 1 MFNSDNLR-LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQA 62 (255)
T ss_dssp CCCGGGGC-CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCE
T ss_pred CCCCCCCC-CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------cCCcE
Confidence 66555433 3579999999999999999999999999999999999999999999987 45688
Q ss_pred eEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCc
Q 019009 81 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG 160 (347)
Q Consensus 81 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g 160 (347)
.+++||++|+++++++++++.+++|+||+||||||+.. ..++ +.+.|+|++++++|+.++++++|+++|+|+++ ++|
T Consensus 63 ~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g 139 (255)
T d1fmca_ 63 FACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGG 139 (255)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-ccc
Confidence 99999999999999999999999999999999999876 3555 78999999999999999999999999999988 588
Q ss_pred EEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH
Q 019009 161 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET 240 (347)
Q Consensus 161 ~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~ 240 (347)
+||++||. ++..+.|+..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|++.......... ...
T Consensus 140 ~Ii~isS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~---------~~~ 209 (255)
T d1fmca_ 140 VILTITSM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIE---------QKM 209 (255)
T ss_dssp EEEEECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHH---------HHH
T ss_pred cccccccc-chhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHH---------HHH
Confidence 99999988 78889999999999999999999999999999999999999999999987544321110 112
Q ss_pred HHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 241 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 241 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
..+.+++|+..|+|++.++.||+++...+++++.+..+|+|.
T Consensus 210 ~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~ 251 (255)
T d1fmca_ 210 LQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp HHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence 233456778888899999999999998888888888888774
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.5e-51 Score=366.65 Aligned_cols=246 Identities=25% Similarity=0.342 Sum_probs=215.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+. .+.++.++++|++|+
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~----------------~g~~~~~~~~Dv~~~ 67 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK----------------YGVETMAFRCDVSNY 67 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH----------------hCCcEEEEEccCCCH
Confidence 4799999999999999999999999999999999999999999888664 346788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ +.|+||+++|..+
T Consensus 68 ~~v~~~~~~~~~~~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i~S~~~ 145 (251)
T d1vl8a_ 68 EEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTV 145 (251)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-ccccccccccchh
Confidence 9999999999999999999999999977 6899999999999999999999999999999999987 5899999998744
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
...+.++..+|++||+|+++|+++|+.|++++|||||+|+||+|+|+|........ +. ..+...+.+++|+.
T Consensus 146 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~-------~~~~~~~~pl~R~~ 217 (251)
T d1vl8a_ 146 EEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP-EK-------LDYMLKRIPLGRTG 217 (251)
T ss_dssp TCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH-HH-------HHHHHHTCTTSSCB
T ss_pred ccccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCH-HH-------HHHHHhcCCCCCCC
Confidence 56677888999999999999999999999999999999999999999864322110 00 01122344578889
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++.++.||+++...+++++.+..+|+|.
T Consensus 218 ~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t 249 (251)
T d1vl8a_ 218 VPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT 249 (251)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence 99999999999999999888888888888763
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=8.8e-51 Score=366.16 Aligned_cols=248 Identities=23% Similarity=0.283 Sum_probs=216.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.. .+.++.+++||++|+
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~---------------~~~~~~~~~~Dvt~~ 67 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA---------------PDAEVLTTVADVSDE 67 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTCCEEEEECCTTSH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC---------------CCCeEEEEeccCCCH
Confidence 47999999999999999999999999999999999999999988887643 245788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||+||+||||||+..+..++.+.+.|+|++++++|+.++++++|+++|+|+++ ++|+|||+||. +
T Consensus 68 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~-~ 145 (258)
T d1iy8a_ 68 AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASV-G 145 (258)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG-G
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-cCCCCcccccH-h
Confidence 999999999999999999999999987656789999999999999999999999999999999987 58999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH-----H
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART-----L 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~-----~ 245 (347)
+..+.|+...|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|...... ......+++..+. +
T Consensus 146 ~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~~~~~~p 218 (258)
T d1iy8a_ 146 GIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMK-------QLDPENPRKAAEEFIQVNP 218 (258)
T ss_dssp GTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHH-------HHCTTCHHHHHHHHHTTCT
T ss_pred hccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHh-------hcCcccHHHHHHHHHhcCC
Confidence 888999999999999999999999999999999999999999999998643211 1111223333332 4
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
++|+..|+|++..+.||+++...++++..+..+|++.
T Consensus 219 l~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 219 SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 5777889999999999999998888888877777763
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=3.6e-51 Score=368.33 Aligned_cols=251 Identities=21% Similarity=0.294 Sum_probs=216.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++++ .+.++.+++||++|+++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~-----------------~g~~~~~~~~Dv~~~~~ 64 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-----------------AGGHAVAVKVDVSDRDQ 64 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTSHHH
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeCCCHHH
Confidence 7899999999999999999999999999999999999999999977 45689999999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.|+++++|+++|+|.+++++++||++||. ++.
T Consensus 65 v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~-~~~ 142 (255)
T d1gega_ 65 VFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ-AGH 142 (255)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GGT
T ss_pred HHHHHHHHHHHhCCccEEEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccch-hhc
Confidence 99999999999999999999999987 5899999999999999999999999999999998877667899999988 688
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccC-CHHHHHHHHhhhhhh
Q 019009 173 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPETVARTLVPRIRV 251 (347)
Q Consensus 173 ~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~-~pe~~a~~~~~~~~~ 251 (347)
.+.|+...|++||+|+++|+|+||.|++++|||||+|+||+|+|+|.........+........ ..+...+.+++|+..
T Consensus 143 ~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ 222 (255)
T d1gega_ 143 VGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSE 222 (255)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBC
T ss_pred ccCcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcC
Confidence 8999999999999999999999999999999999999999999998754322111111000000 112233445788889
Q ss_pred ccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 252 VKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
|+|++..+.||+++...++++..+..+|++.
T Consensus 223 peevA~~v~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 223 PEDVAACVSYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence 9999999999999998888888887777764
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1e-50 Score=366.48 Aligned_cols=254 Identities=20% Similarity=0.200 Sum_probs=210.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+. .+.++.++++|++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~----------------~g~~~~~~~~Dv~ 65 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ----------------HGVKVLYDGADLS 65 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH----------------HTSCEEEECCCTT
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHh----------------cCCcEEEEECCCC
Confidence 468999999999999999999999999999999997 46677777777664 3467899999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|+++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ +.|+||++||.
T Consensus 66 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~ 143 (260)
T d1x1ta1 66 KGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASA 143 (260)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-CCceEeecccc
Confidence 999999999999999999999999999987 5899999999999999999999999999999999987 57999999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhcc-CCHH-HHHHHHh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC-ELPE-TVARTLV 246 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~-~~pe-~~a~~~~ 246 (347)
++..+.|+..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.........+....... ...+ .....++
T Consensus 144 -~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 222 (260)
T d1x1ta1 144 -HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS 222 (260)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT
T ss_pred -cceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC
Confidence 788899999999999999999999999999999999999999999999976543221111000000 0001 1234467
Q ss_pred hhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 247 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+|+..|+|++.++.||+++...+++++.+..+|+|.
T Consensus 223 ~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~t 258 (260)
T d1x1ta1 223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258 (260)
T ss_dssp CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchh
Confidence 788889999999999999999888888888888774
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=6.9e-51 Score=365.52 Aligned_cols=243 Identities=22% Similarity=0.293 Sum_probs=211.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+|++|||||++|||+++|+.|+++|++|++++|++++++++.+++++ .+.++.++.+|++|
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~-----------------~g~~~~~~~~Dvt~ 70 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-----------------FGYESSGYAGDVSK 70 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-----------------TTCCEEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCC
Confidence 3579999999999999999999999999999999999999999999876 45678999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++++.++||+||+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+++ ++|+|||+||.
T Consensus 71 ~~~v~~~~~~~~~~~g~iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~- 147 (251)
T d2c07a1 71 KEEISEVINKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSI- 147 (251)
T ss_dssp HHHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCT-
T ss_pred HHHHHHHHHHHHHhcCCceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEECCH-
Confidence 99999999999999999999999999987 5889999999999999999999999999999999987 58999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|+|.........+ +...+.+++|+
T Consensus 148 ~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~----------~~~~~~pl~R~ 217 (251)
T d2c07a1 148 VGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKK----------NIISNIPAGRM 217 (251)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHH----------HHHTTCTTSSC
T ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHH----------HHHhcCCCCCC
Confidence 67788899999999999999999999999999999999999999999997554321111 11223456777
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
..|+|++.++.||+++...++++..+..+|+|.
T Consensus 218 ~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~s 250 (251)
T d2c07a1 218 GTPEEVANLACFLSSDKSGYINGRVFVIDGGLS 250 (251)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred cCHHHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence 888888888899999998888888877777763
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2e-50 Score=363.99 Aligned_cols=247 Identities=22% Similarity=0.301 Sum_probs=193.8
Q ss_pred Cccc-CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 7 EHWS-CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 7 ~~~~-~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
.+|+ .||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++ .+.++.++.|
T Consensus 2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~ 64 (259)
T d1xq1a_ 2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-----------------KGFQVTGSVC 64 (259)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCceEEEec
Confidence 4564 689999999999999999999999999999999999999999999877 4567999999
Q ss_pred CCCCHHHHHHHHHHHHhhc-CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 86 DVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
|++++++++++++++.++| |+||+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||+
T Consensus 65 Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~ 142 (259)
T d1xq1a_ 65 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIF 142 (259)
T ss_dssp CTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEE
T ss_pred cCCCHHHHHHHHHHHHHHhCCCcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-ccccccc
Confidence 9999999999999999998 68999999999987 5889999999999999999999999999999999987 5899999
Q ss_pred EcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 165 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 165 vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
+||. ++..+.++...|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|......... ......+.
T Consensus 143 isS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~---------~~~~~~~~ 212 (259)
T d1xq1a_ 143 MSSI-AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---------KKVVISRK 212 (259)
T ss_dssp EC-----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------
T ss_pred cccc-cccccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHH---------HHHHHhCC
Confidence 9998 6788889999999999999999999999999999999999999999998754332111 11223456
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+++|+..|+|++.++.||+++...++++..+..+|++.
T Consensus 213 pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s 250 (259)
T d1xq1a_ 213 PLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 250 (259)
T ss_dssp -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEE
Confidence 78899999999999999999999888888888888764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=5.7e-51 Score=367.49 Aligned_cols=247 Identities=25% Similarity=0.322 Sum_probs=214.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++++ .+.++.++++|++|+
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~-----------------~g~~~~~~~~Dvs~~ 63 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-----------------AGVEADGRTCDVRSV 63 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeecCCH
Confidence 379999999999999999999999999999999999999999999976 456899999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH--hHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~--l~~~~~~g~Iv~vsS~ 168 (347)
++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+ |+++ +.|+||+++|.
T Consensus 64 ~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-~~g~Ii~i~S~ 141 (257)
T d2rhca1 64 PEIEALVAAVVERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIAST 141 (257)
T ss_dssp HHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-TEEEEEEECCG
T ss_pred HHHHHHHHHHHHHhCCCCEEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-CCccccccccc
Confidence 9999999999999999999999999987 588999999999999999999999999999997 4454 47899999988
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH-----
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR----- 243 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~----- 243 (347)
++..+.|+...|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|........ .......+++..+
T Consensus 142 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~e~~~~~~~~ 216 (257)
T d2rhca1 142 -GGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHY----SDIWEVSTEEAFDRITAR 216 (257)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHH----HHHTTCCHHHHHHHHHTT
T ss_pred -ccccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhh----hhhcccChHHHHHHHHhc
Confidence 688899999999999999999999999999999999999999999999865432111 1111223333333
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+++|+..|+|++..+.||+++...+++++.+..+|++
T Consensus 217 ~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 254 (257)
T d2rhca1 217 VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 254 (257)
T ss_dssp STTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence 34567888999999999999999877777777776654
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=2e-50 Score=364.45 Aligned_cols=250 Identities=18% Similarity=0.265 Sum_probs=216.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++ .+.++.++.||++|+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~Dv~~~ 66 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-----------------KGVEARSYVCDVTSE 66 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCH
Confidence 479999999999999999999999999999999999999999998876 456889999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||+||+||||||+..+..++.+.+.|+|++++++|+.++++++|+++|+|+++ +.|+||++||. +
T Consensus 67 ~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~-~ 144 (260)
T d1zema1 67 EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASM-A 144 (260)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH-H
T ss_pred HHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeech-h
Confidence 999999999999999999999999987656889999999999999999999999999999999987 58999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh-hhhhhccCCHHHHHHHH----
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK-QMFNIICELPETVARTL---- 245 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~pe~~a~~~---- 245 (347)
+..+.|+...|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|.......... .........|+++++.+
T Consensus 145 ~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T d1zema1 145 GVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224 (260)
T ss_dssp HHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred hccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC
Confidence 7888999999999999999999999999999999999999999999986443221111 11112223566665544
Q ss_pred -hhhhhhccccccceeeccchHHHHHHhhhhhcCC
Q 019009 246 -VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 279 (347)
Q Consensus 246 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 279 (347)
++|+..|+|++..+.||+++...+++++.+..||
T Consensus 225 Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG 259 (260)
T d1zema1 225 PMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG 259 (260)
T ss_dssp TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence 5677889999999999999998666666555544
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=3.7e-50 Score=362.36 Aligned_cols=248 Identities=23% Similarity=0.324 Sum_probs=217.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++++ .+.++.++.+|++|+
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~Dv~~~ 69 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-----------------KGFKVEASVCDLSSR 69 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCCceEEEeeCCCH
Confidence 689999999999999999999999999999999999999999999877 456888999999999
Q ss_pred HHHHHHHHHHHhhcC-CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g-~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.++++ ++|+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ +.|+||++||.
T Consensus 70 ~~v~~~~~~~~~~~~~~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~- 146 (259)
T d2ae2a_ 70 SERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSV- 146 (259)
T ss_dssp HHHHHHHHHHHHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCG-
T ss_pred HHHHHHHHHHHHHhCCCceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-ccccccccccc-
Confidence 999999999999987 7999999999987 5889999999999999999999999999999999988 58999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.|+...|++||+|+++|+|+||.|++++|||||+|+||+|+|+|............. ..+...+.+++|+
T Consensus 147 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~-----~~~~~~~~pl~R~ 221 (259)
T d2ae2a_ 147 SGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKEN-----LNKLIDRCALRRM 221 (259)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHH-----HHHHHHTSTTCSC
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHH-----HHHHHhcCCCCCC
Confidence 67888999999999999999999999999999999999999999999986443221110000 0122334567888
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcccc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD 283 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (347)
..|+|++..+.||+++...++++..+..+|+|.-
T Consensus 222 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~a 255 (259)
T d2ae2a_ 222 GEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA 255 (259)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cCHHHHHHHHHHHhCchhCCCcCcEEEECCCeEe
Confidence 8899999999999999998888888888887743
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=2.8e-50 Score=363.34 Aligned_cols=246 Identities=23% Similarity=0.294 Sum_probs=212.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++++ .+.++.++++|++
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-----------------~g~~~~~~~~Dvt 67 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-----------------VGGEAIAVKGDVT 67 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence 35799999999999999999999999999999999864 67778888876 4568999999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|+++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|++++.+++||++||.
T Consensus 68 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~ 146 (261)
T d1geea_ 68 VESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSV 146 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccc
Confidence 999999999999999999999999999987 5889999999999999999999999999999999988666789999988
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++..+.|+..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|++........ +.. .+...+.+++|
T Consensus 147 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~-~~~-------~~~~~~~pl~R 217 (261)
T d1geea_ 147 -HEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP-EQR-------ADVESMIPMGY 217 (261)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH-HHH-------HHHHTTCTTSS
T ss_pred -hhcccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCH-HHH-------HHHHhcCCCCC
Confidence 688899999999999999999999999999999999999999999999864322110 000 11122335778
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+..|+|++.++.||+++...+++++.+..+|++.
T Consensus 218 ~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s 251 (261)
T d1geea_ 218 IGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCHHHHHHHHHHHhCchhcCCcCCeEEECCCee
Confidence 8888999999999999998777777777777663
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.4e-50 Score=361.45 Aligned_cols=234 Identities=23% Similarity=0.287 Sum_probs=207.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++++++.+++. .++.++++|++|+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~Dv~~~ 64 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--------------------DAARYVHLDVTQP 64 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--------------------GGEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--------------------CcceEEEeecCCH
Confidence 47999999999999999999999999999999999999888777652 3577899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ +.|+||++||. +
T Consensus 65 ~~v~~~~~~~~~~~g~idilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~-~ 141 (244)
T d1nffa_ 65 AQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSI-E 141 (244)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEecccc-c
Confidence 9999999999999999999999999987 5899999999999999999999999999999999987 58999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++...|++||+|+++|+|+||.|++++|||||+|+||+|+|+|....... ..+.+++|+.
T Consensus 142 ~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---------------~~~~pl~R~~ 206 (244)
T d1nffa_ 142 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED---------------IFQTALGRAA 206 (244)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT---------------CSCCSSSSCB
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH---------------HHhccccCCC
Confidence 7889999999999999999999999999999999999999999999986543221 1123456666
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++..+.||+++...+++++.+..+|++.
T Consensus 207 ~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~ 238 (244)
T d1nffa_ 207 EPVEVSNLVVYLASDESSYSTGAEFVVDGGTV 238 (244)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHhChhhCCCcCCEEEECCCee
Confidence 67777777789999998888888888888774
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-50 Score=362.40 Aligned_cols=239 Identities=23% Similarity=0.344 Sum_probs=210.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+++||||++|||+++|+.|+++|++|++++|++++++++.+++. .+...+.+|++|+
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~--------------------~~~~~~~~Dv~~~ 62 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--------------------ANGKGLMLNVTDP 62 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------------------GGEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--------------------CCCcEEEEEecCH
Confidence 47999999999999999999999999999999999999988877662 3567889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|+||+||||||... ..++.+.+.|+|++++++|+.++++++|+++|+|+++ ++|+|||+||. +
T Consensus 63 ~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~-~ 139 (243)
T d1q7ba_ 63 ASIESVLEKIRAEFGEVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSV-V 139 (243)
T ss_dssp HHHHHHHHHHHHHTCSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH-H
T ss_pred HHhhhhhhhhhcccCCcceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecch-h
Confidence 9999999999999999999999999987 5889999999999999999999999999999999987 58999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+..+|++||+|+++|+|+|+.|++++|||||+|+||+|+|+|.......... +...+.+++|+.
T Consensus 140 ~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~----------~~~~~~pl~R~~ 209 (243)
T d1q7ba_ 140 GTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRA----------GILAQVPAGRLG 209 (243)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH----------HHHTTCTTSSCB
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHH----------HHHhcCCCCCCC
Confidence 7788899999999999999999999999999999999999999999987554322111 112233467777
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++..+.||+++...+++++.+..+|+|.
T Consensus 210 ~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~ 241 (243)
T d1q7ba_ 210 GAQEIANAVAFLASDEAAYITGETLHVNGGMY 241 (243)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCCeE
Confidence 88888888899999998777887777777653
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=9.8e-50 Score=357.14 Aligned_cols=242 Identities=19% Similarity=0.260 Sum_probs=198.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++. ..+.+++ .+.++.++.||++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~-----------------~g~~~~~~~~Dvs~~ 64 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRN-----------------LGRRVLTVKCDVSQP 64 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHH-----------------cCCcEEEEEeeCCCH
Confidence 469999999999999999999999999999999987542 2333433 456899999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ ++|+|||+||. +
T Consensus 65 ~~v~~~~~~~~~~~G~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Iv~isS~-~ 141 (247)
T d2ew8a1 65 GDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTST-T 141 (247)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-CCCCccccccc-h
Confidence 9999999999999999999999999987 6899999999999999999999999999999999987 58999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+...|++||+|+.+|+|+||.|++++|||||+|+||+|+|++............... ...+++|+.
T Consensus 142 ~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~--------~~~~l~r~~ 213 (247)
T d2ew8a1 142 YWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPN--------MLQAIPRLQ 213 (247)
T ss_dssp GGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------C--------TTSSSCSCC
T ss_pred hcccCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHH--------HhccCCCCC
Confidence 888899999999999999999999999999999999999999999998754332211111000 011356677
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++..+.||+++...++++..+..+|++.
T Consensus 214 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~ 245 (247)
T d2ew8a1 214 VPLDLTGAAAFLASDDASFITGQTLAVDGGMV 245 (247)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCCEe
Confidence 78888888889999998777887777777763
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=5.9e-50 Score=359.42 Aligned_cols=243 Identities=21% Similarity=0.271 Sum_probs=212.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.. +.++.++.+|++|+
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dv~~~ 66 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------------------PDQIQFFQHDSSDE 66 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------------------CCcEEEEEccCCCH
Confidence 479999999999999999999999999999999999999888877632 35788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|++++.+++||++||. +
T Consensus 67 ~~v~~~~~~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~-~ 144 (251)
T d1zk4a1 67 DGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI-E 144 (251)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHhCCceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc-c
Confidence 9999999999999999999999999987 5899999999999999999999999999999999988556799999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhH--hcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~e--l~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+..+.|+...|++||+|+.+|+++||.| ++++|||||+|+||+|+|+|.......... ... ..+.+++|
T Consensus 145 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~--~~~-------~~~~pl~R 215 (251)
T d1zk4a1 145 GFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEA--MSQ-------RTKTPMGH 215 (251)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHH--HTS-------TTTCTTSS
T ss_pred eeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHH--HHH-------HhCCCCCC
Confidence 8888999999999999999999999999 568999999999999999997654322111 110 11235677
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+..|+|++..+.||+++...++++..+..+|+|.
T Consensus 216 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t 249 (251)
T d1zk4a1 216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence 7788888888899999998888888888887763
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=9.9e-50 Score=359.04 Aligned_cols=247 Identities=24% Similarity=0.329 Sum_probs=211.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++ +.++.++++|++|+
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--------------------~~~~~~~~~Dvt~~ 63 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--------------------GPAACAIALDVTDQ 63 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCceEEEEeeCCCH
Confidence 5799999999999999999999999999999999999988887765 24688899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.|+++++|+++|+|.+++++|+||++||. +
T Consensus 64 ~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~-~ 141 (256)
T d1k2wa_ 64 ASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQ-A 141 (256)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHhCCccEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccch-h
Confidence 9999999999999999999999999987 5899999999999999999999999999999987766568999999998 7
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhcc-C-CHHHHHHHHhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC-E-LPETVARTLVPR 248 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~-~-~pe~~a~~~~~~ 248 (347)
+..+.|+...|++||+|+++|+++||.|++++|||||+|+||+++|++........... ..... . ..+.....+++|
T Consensus 142 ~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~PlgR 220 (256)
T d1k2wa_ 142 GRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADY-ENLPRGEKKRQVGAAVPFGR 220 (256)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHH-HTCCTTHHHHHHHHHSTTSS
T ss_pred hccccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhh-ccCChHHHHHHHHhcCCCCC
Confidence 88899999999999999999999999999999999999999999999865432211110 00000 0 011233446788
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
+..|+|++..+.||+++...+++++.+..||+
T Consensus 221 ~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG 252 (256)
T d1k2wa_ 221 MGRAEDLTGMAIFLATPEADYIVAQTYNVDGG 252 (256)
T ss_dssp CBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence 88999999999999999987777777766665
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=5.9e-50 Score=357.83 Aligned_cols=239 Identities=22% Similarity=0.366 Sum_probs=208.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+++|||||++|||+++|++|+++|++|+++ .|+++.++++.+++++ .+.++.++++|++|++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~~Dv~~~~ 64 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-----------------YGGQAITFGGDVSKEA 64 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------HTCEEEEEECCTTSHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCcEEEEeCCCCCHH
Confidence 599999999999999999999999999987 5677788888888876 4568899999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
+++++++++.++||+||+||||||... ..++.+.+.|+|++++++|+.++++++|+++|+|+++ ++|+|||+||. ++
T Consensus 65 ~v~~~~~~~~~~~g~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~-~~ 141 (244)
T d1edoa_ 65 DVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASV-VG 141 (244)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-HH
T ss_pred HHHHHHHHHHHHcCCCCcccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcCh-hh
Confidence 999999999999999999999999987 5899999999999999999999999999999999987 58999999998 67
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhh
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 251 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~ 251 (347)
..+.++...|++||+|+.+|+|+|+.|++++|||||+|+||+|+|+|.........+ +...+.+++|+..
T Consensus 142 ~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~----------~~~~~~pl~R~~~ 211 (244)
T d1edoa_ 142 LIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEK----------KILGTIPLGRTGQ 211 (244)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHH----------HHHTSCTTCSCBC
T ss_pred cCCCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHH----------HHHhcCCCCCCcC
Confidence 888899999999999999999999999999999999999999999987554322111 1122345677788
Q ss_pred ccccccceeecc-chHHHHHHhhhhhcCCcc
Q 019009 252 VKGSGKAINYLT-PPRILLALVTAWLRRGRW 281 (347)
Q Consensus 252 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~ 281 (347)
|+|++..+.||+ ++...+++++.+..+|++
T Consensus 212 p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 212 PENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence 888888888996 888877777777766664
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=1.2e-49 Score=357.48 Aligned_cols=239 Identities=27% Similarity=0.316 Sum_probs=208.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++.++++|++|+
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~~ 63 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------------------GDAARYQHLDVTIE 63 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------------------GGGEEEEECCTTCH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCceEEEEcccCCH
Confidence 4799999999999999999999999999999999999887776654 34688999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ +.|+||++||. +
T Consensus 64 ~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~-~ 140 (254)
T d1hdca_ 64 EDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSA-A 140 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHcCCccEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccc-h
Confidence 9999999999999999999999999987 5889999999999999999999999999999999987 58999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|.........+.. ..+.+++|+.
T Consensus 141 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~----------~~~~pl~R~g 210 (254)
T d1hdca_ 141 GLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN----------YPNTPMGRVG 210 (254)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTS----------CTTSTTSSCB
T ss_pred hcccccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHH----------HhCCCCCCCC
Confidence 888999999999999999999999999999999999999999999998754332221111 1123455554
Q ss_pred -hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 -VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++.++.||+++...+++++.+..+|+|.
T Consensus 211 ~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t 243 (254)
T d1hdca_ 211 NEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp -CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence 46777777789999998888888888888774
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.6e-49 Score=353.45 Aligned_cols=242 Identities=19% Similarity=0.237 Sum_probs=203.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+++ ...+++||++|
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~----------------------~~~~~~~Dv~~ 59 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI----------------------GGAFFQVDLED 59 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH----------------------TCEEEECCTTC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc----------------------CCeEEEEeCCC
Confidence 45899999999999999999999999999999999987643 22222 23468999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.|+++++|+++|+|+++ ++|+||+++|.
T Consensus 60 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~- 136 (248)
T d2d1ya1 60 ERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASV- 136 (248)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-ccccccccccc-
Confidence 99999999999999999999999999987 5899999999999999999999999999999999988 58999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.|+...|++||+|+++|+|+|+.|++++|||||+|+||+|+|++.......... ............+++|+
T Consensus 137 ~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~~pl~R~ 212 (248)
T d2d1ya1 137 QGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPD----PERTRRDWEDLHALRRL 212 (248)
T ss_dssp GGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC------------CHHHHTTSTTSSC
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCC----HHHHHHHHHhcCCCCCC
Confidence 78889999999999999999999999999999999999999999999986432111000 00000111223356778
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|+|++..+.||+++...+++++.+..||+|
T Consensus 213 ~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 244 (248)
T d2d1ya1 213 GKPEEVAEAVLFLASEKASFITGAILPVDGGM 244 (248)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCchhcCCCCcEEEcCcCc
Confidence 88899999999999999888888888777776
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-50 Score=358.15 Aligned_cols=242 Identities=23% Similarity=0.300 Sum_probs=203.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++++++.+++ .++.++.||++|+
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~---------------------~~~~~~~~Dvs~~ 63 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---------------------PGAVFILCDVTQE 63 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------------------TTEEEEECCTTSH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEccCCCH
Confidence 4799999999999999999999999999999999998887766553 3467899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||+||+||||||+.....++++.+.|+|++++++|+.++++++|+++|+|+++ +|+||++||. +
T Consensus 64 ~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~-~ 140 (250)
T d1ydea1 64 DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSL-V 140 (250)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCH-H
T ss_pred HHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccc-c
Confidence 999999999999999999999999986545678899999999999999999999999999999875 5899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|............. ...+.....+++|+.
T Consensus 141 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~----~~~~~~~~~pl~R~g 216 (250)
T d1ydea1 141 GAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRA----SIREGMLAQPLGRMG 216 (250)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHH----HHHHHHHTSTTSSCB
T ss_pred ccccccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHH----HHHHHHhcCCCCCCC
Confidence 7788899999999999999999999999999999999999999999986432211100000 001223344577888
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|+|++.++.||+++ ..+++++.+..+|++
T Consensus 217 ~p~eva~~v~fL~Sd-a~~itG~~i~vDGG~ 246 (250)
T d1ydea1 217 QPAEVGAAAVFLASE-ANFCTGIELLVTGGA 246 (250)
T ss_dssp CHHHHHHHHHHHHHH-CTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhCc-cCCCcCCeEEECCCc
Confidence 899999999999986 556677777766665
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=5.9e-49 Score=350.93 Aligned_cols=236 Identities=20% Similarity=0.215 Sum_probs=205.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +..++.||++|+
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~----------------------~~~~~~~Dv~~~ 61 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----------------------GAHPVVMDVADP 61 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------------TCEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----------------------CCeEEEEecCCH
Confidence 5799999999999999999999999999999999998887765543 356789999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ +.++|+++||.
T Consensus 62 ~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~ss~-- 137 (242)
T d1ulsa_ 62 ASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASR-- 137 (242)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCG--
T ss_pred HHHHHHHHHHHHhcCCceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeeccc--
Confidence 9999999999999999999999999987 5899999999999999999999999999999999987 57777777764
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++.....+... .+.....+++|+.
T Consensus 138 ~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~----------~~~~~~~pl~R~~ 207 (242)
T d1ulsa_ 138 VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVR----------EKAIAATPLGRAG 207 (242)
T ss_dssp GGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHH----------HHHHHTCTTCSCB
T ss_pred cccCCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHH----------HHHHhcCCCCCCC
Confidence 567888999999999999999999999999999999999999999999755432211 1223344577888
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++.++.||+++...++++..+..||+|.
T Consensus 208 ~pedia~~v~fL~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 208 KPLEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence 88888999999999998888888888777763
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=2.6e-47 Score=339.84 Aligned_cols=215 Identities=25% Similarity=0.404 Sum_probs=194.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCe-------EEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDR-------VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~-------Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
++||||||++|||+++|++|+++|++ |++++|++++++++.+++++ .+.++.++.|
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~ 64 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-----------------EGALTDTITA 64 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-----------------TTCEEEEEEC
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEe
Confidence 57899999999999999999999997 99999999999999999876 4578899999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|++|+++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.|+++++|+++|+|+++ ++|+||++
T Consensus 65 Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~i 142 (240)
T d2bd0a1 65 DISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFI 142 (240)
T ss_dssp CTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEE
Confidence 999999999999999999999999999999987 6899999999999999999999999999999999987 58999999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.|+...|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.......... ....||++|+.+
T Consensus 143 sS~-~~~~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~~-----~~~~PedvA~~v 216 (240)
T d2bd0a1 143 TSV-AATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQA-----LMMMPEDIAAPV 216 (240)
T ss_dssp CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGG-----GSBCHHHHHHHH
T ss_pred ech-hhcCCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhHh-----cCCCHHHHHHHH
Confidence 998 78889999999999999999999999999999999999999999999998665433221 224789999988
Q ss_pred hhhhhhc
Q 019009 246 VPRIRVV 252 (347)
Q Consensus 246 ~~~~~~~ 252 (347)
+..+..+
T Consensus 217 ~~l~s~~ 223 (240)
T d2bd0a1 217 VQAYLQP 223 (240)
T ss_dssp HHHHTSC
T ss_pred HHHHcCC
Confidence 7665543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.8e-48 Score=352.37 Aligned_cols=254 Identities=19% Similarity=0.225 Sum_probs=199.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++++... ...++.++.+|++|.
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~--------------~~~~~~~~~~Dvt~~ 69 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV--------------SEQNVNSVVADVTTD 69 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTTSH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--------------CcCceEEEEccCCCH
Confidence 469999999999999999999999999999999999999999999977421 234689999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++++++++++.++||+||+||||||+..+ ..++.+.+.|+|++++++|+.++++++|+++|+|+++ +|.||+++|
T Consensus 70 ~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~S 147 (264)
T d1spxa_ 70 AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISS 147 (264)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceeeee
Confidence 99999999999999999999999998642 2456677999999999999999999999999999876 466777777
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhh
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 247 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~ 247 (347)
+.++..+.|+...|++||+|+++|+|+||.|++++|||||+|+||+|+|+|........... ..............+++
T Consensus 148 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pl~ 226 (264)
T d1spxa_ 148 IASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETS-KKFYSTMATMKECVPAG 226 (264)
T ss_dssp TTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHHHCTTS
T ss_pred eccccccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHH-HHHHHHHHHHHhcCCCC
Confidence 64677889999999999999999999999999999999999999999999875432211100 00000001122344678
Q ss_pred hhhhccccccceeeccchH-HHHHHhhhhhcCCcc
Q 019009 248 RIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRW 281 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 281 (347)
|+..|+|++.++.||+++. ..+++++.+..||++
T Consensus 227 R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 227 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence 8889999999999999954 666777777766665
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-48 Score=354.86 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=215.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++|||||++|||+++|++|+++|++|++++|+.++++++.++|++.... ..+.++.++.||++|
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~------------~~~~~~~~~~~Dvs~ 77 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP------------TKQARVIPIQCNIRN 77 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT------------TCCCCEEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhcc------------ccCceEEEEeccCCC
Confidence 46899999999999999999999999999999999999999999999774321 135689999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ ++++||++|+.
T Consensus 78 ~~~v~~~~~~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~Ii~~ss~- 154 (297)
T d1yxma1 78 EEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVP- 154 (297)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-ccccccccccc-
Confidence 99999999999999999999999999987 5899999999999999999999999999999999987 57889998764
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
...+.|+...|++||+|+.+|+|+||.|++++|||||+|+||+|+|++.........+.... ....+.+++|+
T Consensus 155 -~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~------~~~~~~plgR~ 227 (297)
T d1yxma1 155 -TKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE------GSFQKIPAKRI 227 (297)
T ss_dssp -CTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT------TGGGGSTTSSC
T ss_pred -ccccccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHH------HHHhcCCCCCC
Confidence 45678889999999999999999999999999999999999999999875544332222211 11233457888
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
..|+|++.++.||+++...+++++.+..+|++.
T Consensus 228 g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 228 GVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp BCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence 889999999999999998777777777766653
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=1.2e-47 Score=345.52 Aligned_cols=252 Identities=22% Similarity=0.335 Sum_probs=214.2
Q ss_pred cc-cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 8 HW-SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 8 ~~-~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
+| ..||++|||||++|||+++|++|+++|++|++++|++++++++.+++++ .+.++.++.||
T Consensus 1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~D 63 (258)
T d1ae1a_ 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-----------------KGLNVEGSVCD 63 (258)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECC
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCCceEEEee
Confidence 45 3789999999999999999999999999999999999999999998877 45678899999
Q ss_pred CCCHHHHHHHHHHHHhhc-CCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 87 VCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
+++.++++++++++.+++ +.+|+||||||... ..++.+.+.++|++++++|+.+++.++++++|.|.++ ..|+||++
T Consensus 64 ~s~~~~~~~~~~~~~~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~i 141 (258)
T d1ae1a_ 64 LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFL 141 (258)
T ss_dssp TTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHhCCCcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccc-cccccccc
Confidence 999999999999999998 57999999999987 5899999999999999999999999999999999988 68999999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.|+...|+++|+|+++|++.|++|++++|||||+|+||+++|+|............ + ..-+...+.+
T Consensus 142 sS~-~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~-~---~~~~~~~~~p 216 (258)
T d1ae1a_ 142 SSI-AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQK-E---EIDNFIVKTP 216 (258)
T ss_dssp CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CH-H---HHHHHHHHST
T ss_pred ccc-ccccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhH-H---HHHHHHhcCC
Confidence 998 6788999999999999999999999999999999999999999999998755432211100 0 0012233456
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD 283 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (347)
++|+..|+|++.++.||+++...++++..+..||+|..
T Consensus 217 lgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~ 254 (258)
T d1ae1a_ 217 MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA 254 (258)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeec
Confidence 78888999999999999999998888888888888754
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=5.7e-48 Score=349.89 Aligned_cols=245 Identities=22% Similarity=0.303 Sum_probs=206.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++.. ...+.++.||++|+
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~------------------~~~~~~~~~Dv~~~ 66 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS------------------PDVISFVHCDVTKD 66 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------------------CCceEEEEccCCCH
Confidence 479999999999999999999999999999999999999988888743 23577889999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~-~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.++||+||+||||||+.... ..+.+.+.|+|++++++|+.|+++++|+++|+|+++ +.|+||+++|.
T Consensus 67 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~ii~iss~- 144 (268)
T d2bgka1 67 EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASI- 144 (268)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCG-
T ss_pred HHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-CCCCccccccc-
Confidence 999999999999999999999999986522 347889999999999999999999999999999987 58999999987
Q ss_pred CCCCCCC-CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH---HH
Q 019009 170 SGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR---TL 245 (347)
Q Consensus 170 ~~~~~~~-~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~---~~ 245 (347)
++..+.+ ....|++||+|+++|+|+||.||+++|||||+|+||+|+|+|............ ++... .+
T Consensus 145 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--------~~~~~~~~~~ 216 (268)
T d2bgka1 145 SSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRV--------EELAHQAANL 216 (268)
T ss_dssp GGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHH--------HHHHHHTCSS
T ss_pred cccccccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHH--------HHHHHhcccc
Confidence 4555444 445899999999999999999999999999999999999999765433221111 11111 13
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCcccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD 283 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (347)
.+++..|+|++.++.||+++...+++++.+..||+|..
T Consensus 217 ~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~ 254 (268)
T d2bgka1 217 KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTR 254 (268)
T ss_dssp CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCccc
Confidence 45677788888888999999998888888888888743
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.1e-48 Score=346.22 Aligned_cols=231 Identities=20% Similarity=0.289 Sum_probs=192.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++|||||++|||+++|++|+++|++|++++|+.+++ .++..+++|++|
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------------------~~~~~~~~Dv~~ 56 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------------KGLFGVEVDVTD 56 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------------------TTSEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------------------------cCceEEEEecCC
Confidence 3579999999999999999999999999999999987542 356789999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
+++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.+++.++|+++|+|+++ +.|+|||+||.
T Consensus 57 ~~~v~~~~~~~~~~~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS~- 133 (237)
T d1uzma1 57 SDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSV- 133 (237)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCC-
T ss_pred HHHHHHHHHHHHHhcCCceEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcch-
Confidence 99999999999999999999999999987 5889999999999999999999999999999999998 58899999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++..+|++||+|+++|+|+|+.|++++|||||+|+||+|+|+|.....+...+ ......+++|+
T Consensus 134 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~----------~~~~~~pl~R~ 203 (237)
T d1uzma1 134 SGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQ----------GALQFIPAKRV 203 (237)
T ss_dssp CC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHH----------HHGGGCTTCSC
T ss_pred hhccCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHH----------HHHhcCCCCCC
Confidence 67888899999999999999999999999999999999999999999987543221111 11122346777
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|+|++..+.||+++...+++++.+..+|++
T Consensus 204 ~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~ 235 (237)
T d1uzma1 204 GTPAEVAGVVSFLASEDASYISGAVIPVDGGM 235 (237)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred cCHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence 78888888889999999877777766666653
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-48 Score=345.67 Aligned_cols=239 Identities=21% Similarity=0.283 Sum_probs=204.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...||++|||||++|||+++|+.|+++|++|++++|++++++++.+++ ..+..+.+|++
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~---------------------~~~~~~~~Dv~ 62 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---------------------PGIEPVCVDLG 62 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEEeCC
Confidence 456899999999999999999999999999999999999888776654 23667899999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|++++++++ +++|+||+||||||+.. ..++.+.+.|+|++++++|+.++++++++++|+|.++++.|+||++||.
T Consensus 63 d~~~v~~~~----~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~ 137 (244)
T d1pr9a_ 63 DWEATERAL----GSVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137 (244)
T ss_dssp CHHHHHHHH----TTCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred CHHHHHHHH----HHhCCceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccc
Confidence 999987765 56799999999999987 5899999999999999999999999999999987655468999999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
++..+.|+...|++||+|+++|+|+||.|++++|||||+|+||+|+|++.......... . .....+.+++|
T Consensus 138 -~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~-~-------~~~~~~~pl~R 208 (244)
T d1pr9a_ 138 -CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK-A-------KTMLNRIPLGK 208 (244)
T ss_dssp -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHH-H-------HHHHTTCTTCS
T ss_pred -cccccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHH-H-------HHHHhcCCCCC
Confidence 68888999999999999999999999999999999999999999999987554322111 0 11122345677
Q ss_pred hhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 249 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+..|+|++..+.||+++...+++++.+..||+|.
T Consensus 209 ~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~ 242 (244)
T d1pr9a_ 209 FAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW 242 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCchhCCcCCcEEEECccHh
Confidence 8888888888999999999888888888888763
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=4.1e-48 Score=351.51 Aligned_cols=251 Identities=20% Similarity=0.214 Sum_probs=207.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++... .+.++.+++||++|+
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~--------------~~~~~~~~~~Dvs~~ 69 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--------------SEKQVNSVVADVTTE 69 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--------------CGGGEEEEECCTTSH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--------------CCCceEEEEccCCCH
Confidence 479999999999999999999999999999999999999999999876321 235789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~----~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++++++++++.++||+||+||||||+..+ .++ .+.+.++|++++++|+.+++.++|+++|+|+++ +|.||+++
T Consensus 70 ~~v~~~~~~~~~~~g~iDilvnnAG~~~~-~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~ 146 (272)
T d1xkqa_ 70 DGQDQIINSTLKQFGKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVNVS 146 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCC-CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCceEEEeCCcccCc-ccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc--CCcccccc
Confidence 99999999999999999999999998763 333 467888999999999999999999999999875 45566666
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH----H
Q 019009 167 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV----A 242 (347)
Q Consensus 167 S~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~----a 242 (347)
|+.++..+.|+...|++||+|+.+|+|+||.||+++|||||+|+||+|+|+|............ . ..+.. .
T Consensus 147 Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~-~----~~~~~~~~~~ 221 (272)
T d1xkqa_ 147 SIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQ-K----FYNFMASHKE 221 (272)
T ss_dssp CGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHH-H----HHHHHHHCTT
T ss_pred chhccccCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHH-H----HHHHHHHHhc
Confidence 6546788999999999999999999999999999999999999999999998765432211100 0 01111 1
Q ss_pred HHHhhhhhhccccccceeeccchHH-HHHHhhhhhcCCcccc
Q 019009 243 RTLVPRIRVVKGSGKAINYLTPPRI-LLALVTAWLRRGRWFD 283 (347)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 283 (347)
..+++|+..|+|++.++.||+++.. .+++++.+..+|++.-
T Consensus 222 ~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 222 CIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp TCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 2356788889999999999999765 4577777777777643
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=1.2e-48 Score=351.20 Aligned_cols=241 Identities=15% Similarity=0.178 Sum_probs=205.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++++++.+++ +.+..++++|++|.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~~ 64 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--------------------GERSMFVRHDVSSE 64 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------------------CTTEEEECCCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCCeEEEEeecCCH
Confidence 4699999999999999999999999999999999999988877765 24677899999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||++|+||||||+.. ..++.+.+.|+|++++++|+.++++++|+++|+|+++ +|+|||+||. +
T Consensus 65 ~~~~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~-~ 140 (253)
T d1hxha_ 65 ADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASV-S 140 (253)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCG-G
T ss_pred HHHHHHHHHHHHHhCCCCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccch-h
Confidence 9999999999999999999999999987 4889999999999999999999999999999999764 6999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcC--CCeEEEEeeCCcccCcccccCcccc-hhhh-hhhccCCHHHHHHHHh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQ-NKQM-FNIICELPETVARTLV 246 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~--~gI~v~~i~PG~v~T~~~~~~~~~~-~~~~-~~~~~~~pe~~a~~~~ 246 (347)
+..+.++..+|++||+|+.+|+|+||.|+++ +|||||+|+||+|+|++.....+.. .+.. .... ...++
T Consensus 141 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-------~~~~~ 213 (253)
T d1hxha_ 141 SWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP-------KLNRA 213 (253)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT-------TTBTT
T ss_pred hhcCccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCc-------ccccc
Confidence 8889999999999999999999999999986 5699999999999999865422111 1111 1000 01124
Q ss_pred hhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 247 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+++..|+|++.++.||+++...+++++.+..||+|.
T Consensus 214 gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 249 (253)
T d1hxha_ 214 GRAYMPERIAQLVLFLASDESSVMSGSELHADNSIL 249 (253)
T ss_dssp CCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred CCCCCHHHHHHHHHHHhChhhCCCcCcEEEECccHh
Confidence 556667777778889999999888888888888764
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5e-48 Score=344.87 Aligned_cols=237 Identities=21% Similarity=0.271 Sum_probs=203.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++ ..+..+.+|++|+
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---------------------~~~~~~~~Dv~~~ 62 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---------------------PGIEPVCVDLGDW 62 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEEeCCCH
Confidence 5799999999999999999999999999999999998887766554 2466789999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+++++++ +++|+||+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|.|.+++.+|+||+++|. +
T Consensus 63 ~~v~~~~----~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~-~ 136 (242)
T d1cyda_ 63 DATEKAL----GGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM-V 136 (242)
T ss_dssp HHHHHHH----TTCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-G
T ss_pred HHHHHHH----HHcCCCeEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchh-h
Confidence 9987765 56799999999999977 5899999999999999999999999999999987765567999999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|+...|++||+|+.+|+|+|+.|++++|||||+|+||+++|++........ .. ......+.+++|+.
T Consensus 137 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~--~~------~~~~~~~~pl~R~~ 208 (242)
T d1cyda_ 137 AHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP--EF------ARKLKERHPLRKFA 208 (242)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCH--HH------HHHHHHHSTTSSCB
T ss_pred ccccCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCH--HH------HHHHHhcCCCCCCc
Confidence 88889999999999999999999999999999999999999999999865432110 00 01223345678888
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++..+.||+++...+++++.+..||+|.
T Consensus 209 ~peeva~~v~fL~S~~s~~itG~~i~vDGG~~ 240 (242)
T d1cyda_ 209 EVEDVVNSILFLLSDRSASTSGGGILVDAGYL 240 (242)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred CHHHHHHHHHHHhCchhcCcCCceEEeCcchh
Confidence 89999999999999998888888888888764
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-47 Score=337.60 Aligned_cols=216 Identities=22% Similarity=0.262 Sum_probs=194.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++||||||+|||+++|++|+++|++|++++|++++++++.+++++ .+.++..+.||++|
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~Dvs~ 67 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-----------------LGAKVHTFVVDCSN 67 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeCCC
Confidence 3589999999999999999999999999999999999999999999976 45689999999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++++.+++|++|+||||||+.. ..++.+.+.+.|++++++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus 68 ~~~v~~~~~~i~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~- 144 (244)
T d1yb1a_ 68 REDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASA- 144 (244)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHcCCCceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecc-
Confidence 99999999999999999999999999988 5788899999999999999999999999999999988 58999999998
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcC---CCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKR---SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~---~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~ 246 (347)
++..+.|+++.|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|+|...... ......+||++|+.++
T Consensus 145 ~~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~------~~~~~~~pe~va~~i~ 218 (244)
T d1yb1a_ 145 AGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST------SLGPTLEPEEVVNRLM 218 (244)
T ss_dssp C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH------HHCCCCCHHHHHHHHH
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc------cccCCCCHHHHHHHHH
Confidence 68889999999999999999999999999875 58999999999999998754321 1123347999999988
Q ss_pred hhhhh
Q 019009 247 PRIRV 251 (347)
Q Consensus 247 ~~~~~ 251 (347)
..+..
T Consensus 219 ~~~~~ 223 (244)
T d1yb1a_ 219 HGILT 223 (244)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 76654
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=1.4e-47 Score=345.87 Aligned_cols=245 Identities=20% Similarity=0.220 Sum_probs=211.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. .+.++.++.||++|+
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~----------------~g~~~~~~~~Dv~~~ 71 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE----------------FGVKTKAYQCDVSNT 71 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH----------------HTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH----------------hCCceEEEEccCCCH
Confidence 5799999999999999999999999999999999999999988888664 346789999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.|+++++++++|+|.+++.+++|++++|...
T Consensus 72 ~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~ 150 (260)
T d1h5qa_ 72 DIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS 150 (260)
T ss_dssp HHHHHHHHHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccc
Confidence 9999999999999999999999999987 588999999999999999999999999999999976656788888877522
Q ss_pred CC------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHH
Q 019009 171 GG------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 244 (347)
Q Consensus 171 ~~------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~ 244 (347)
.. .+.++...|++||+|+.+|+|+|+.|++++|||||+|+||+|+|++.....+... .....+.
T Consensus 151 ~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~----------~~~~~~~ 220 (260)
T d1h5qa_ 151 QIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIR----------DHQASNI 220 (260)
T ss_dssp TSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHH----------HHHHHTC
T ss_pred ccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHH----------HHHHhcC
Confidence 11 2345778999999999999999999999999999999999999998754432111 1223345
Q ss_pred HhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 245 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+++|+..|+|++..+.||+++...+++++.+..||++.
T Consensus 221 pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 258 (260)
T d1h5qa_ 221 PLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 258 (260)
T ss_dssp TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence 67888999999999999999998777777777777663
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=2.8e-47 Score=346.30 Aligned_cols=254 Identities=19% Similarity=0.192 Sum_probs=210.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++++... ...++.++.+|++|+
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~--------------~~~~~~~~~~Dv~~~ 68 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV--------------PAEKINAVVADVTEA 68 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTTSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CCcceEEEEeeCCCH
Confidence 479999999999999999999999999999999999999999999987421 234788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
++++++++++.++||+||+||||||.... ..+..+.+.|+|++++++|+.+++.++|+++|+|+++ ++|+|+++||.
T Consensus 69 ~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~ii~~ss~- 146 (274)
T d1xhla_ 69 SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSIV- 146 (274)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGG-
T ss_pred HHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-ccccccchhhh-
Confidence 99999999999999999999999997642 2345667899999999999999999999999999987 57888888776
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccch--hhhhhhccCCHHHHHHHHhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN--KQMFNIICELPETVARTLVP 247 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~--~~~~~~~~~~pe~~a~~~~~ 247 (347)
++..+.++...|++||+|+.+|+|+||.|++++|||||+|+||+|+|++......... +...... .+.....+++
T Consensus 147 ~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~---~~~~~~iPlg 223 (274)
T d1xhla_ 147 AGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFI---GSRKECIPVG 223 (274)
T ss_dssp GSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH---HHCTTTCTTS
T ss_pred hccccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHH---HHHHcCCCCC
Confidence 6778889999999999999999999999999999999999999999998654332111 0000000 0001123577
Q ss_pred hhhhccccccceeeccch-HHHHHHhhhhhcCCcccc
Q 019009 248 RIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRWFD 283 (347)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 283 (347)
|+..|+|++..+.||+++ ...+++++.+..||++.-
T Consensus 224 R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l 260 (274)
T d1xhla_ 224 HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL 260 (274)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHH
Confidence 888899999999999985 576778888877777643
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=9.7e-48 Score=345.24 Aligned_cols=238 Identities=16% Similarity=0.134 Sum_probs=205.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
|+|||||++|||+++|+.|+++|++|++++|+.++++++...... +..+|++|.+++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-----------------------~~~~dv~~~~~~ 58 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-----------------------YPQLKPMSEQEP 58 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-----------------------CTTSEECCCCSH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-----------------------EEEeccCCHHHH
Confidence 799999999999999999999999999999998887655332211 246899999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
+++++++.++||+||+||||||+..+..++.+.+.|+|++++++|+.++++++|+++|+|+++ +.|+|||+||. ++..
T Consensus 59 ~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~IV~isS~-~~~~ 136 (252)
T d1zmta1 59 AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSA-TPFG 136 (252)
T ss_dssp HHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCS-TTTS
T ss_pred HHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-ccceeeccccc-cccc
Confidence 999999999999999999999987656889999999999999999999999999999999987 58999999998 7888
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH----HHHHhhhh
Q 019009 174 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV----ARTLVPRI 249 (347)
Q Consensus 174 ~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~----a~~~~~~~ 249 (347)
+.++...|++||+|+.+|+|+|+.|++++|||||+|+||+|+|++.......... ...+|.. ...+++|+
T Consensus 137 ~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~------~~~~e~~~~~~~~~pl~R~ 210 (252)
T d1zmta1 137 PWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPW------KTNPEHVAHVKKVTALQRL 210 (252)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHH------TTCHHHHHHHHHHSSSSSC
T ss_pred ccccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccc------cCCHHHHHHHHhcCCCCCC
Confidence 8999999999999999999999999999999999999999999987544322111 1123322 23356788
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
..|+|++..+.||+++...+++++.+..+|+|.
T Consensus 211 g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 211 GTQKELGELVAFLASGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp BCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred cCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence 899999999999999999888888888888874
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=2.4e-46 Score=340.44 Aligned_cols=249 Identities=20% Similarity=0.172 Sum_probs=203.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++..+.+|+++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~--------------------~~~~~~~~~Dv~~ 62 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH--------------------GDNVLGIVGDVRS 62 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------------------CCCeeEEeccccc
Confidence 35899999999999999999999999999999999999887766553 3478899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFK----PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~----~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
.++++++++++.++||++|+||||||+..... ...+.+.+.|++++++|+.|+++++|+++|+|+++ +|+||++
T Consensus 63 ~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI~i 140 (276)
T d1bdba_ 63 LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVIFT 140 (276)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEE
T ss_pred HHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCceee
Confidence 99999999999999999999999999865222 23445567899999999999999999999999876 4789999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH-HHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VART 244 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-~a~~ 244 (347)
+|. ++..+.|+...|++||+|+.+|+|+||.|+++. ||||+|+||+|+|+|................. ..+. ....
T Consensus 141 ~S~-~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 217 (276)
T d1bdba_ 141 ISN-AGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVP-LADMLKSVL 217 (276)
T ss_dssp CCG-GGTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------C-HHHHHTTTC
T ss_pred eec-hhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHH-HHHHHHhcC
Confidence 887 678889999999999999999999999999975 99999999999999875433221111110000 0111 1234
Q ss_pred Hhhhhhhccccccceeeccch-HHHHHHhhhhhcCCcccc
Q 019009 245 LVPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRWFD 283 (347)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 283 (347)
+++|+..|+|++.++.||+++ ...++++..+..||++..
T Consensus 218 PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~ 257 (276)
T d1bdba_ 218 PIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGV 257 (276)
T ss_dssp TTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred CCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence 578889999999999999985 677888888888887743
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-46 Score=336.45 Aligned_cols=240 Identities=24% Similarity=0.263 Sum_probs=198.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+.++.+++||++|+
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dv~~~ 66 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF---------------EPQKTLFIQCDVADQ 66 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS---------------CGGGEEEEECCTTSH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc---------------CCCcEEEEEeecCCH
Confidence 48999999999999999999999999999999999999999888886532 245788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vsS~ 168 (347)
++++++++++.+++|+||+||||||+... ++|++++++|+.+++.++++++|+|.+++ .+|+||++||.
T Consensus 67 ~~v~~~~~~~~~~~G~iDilVnnAg~~~~---------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~ 137 (254)
T d2gdza1 67 QQLRDTFRKVVDHFGRLDILVNNAGVNNE---------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL 137 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCS---------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred HHHHHHHHHHHHHcCCcCeeccccccccc---------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence 99999999999999999999999998542 35899999999999999999999998753 35899999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHH--HHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-HHHH
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQAS--LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTL 245 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~--La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~~ 245 (347)
++..+.|+..+|++||+|+.+|+|+ |+.|++++|||||+|+||+|+|+|............ .....+.. ...+
T Consensus 138 -~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~---~~~~~~~~~~~~p 213 (254)
T d2gdza1 138 -AGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQ---YIEYKDHIKDMIK 213 (254)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGG---GGGGHHHHHHHHH
T ss_pred -hhccCCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccc---cHHHHHHHHhcCC
Confidence 7888999999999999999999997 789999999999999999999999765432211111 01112222 3345
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR 280 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (347)
++++..|++++.++.||+++.. +++..+..+|+
T Consensus 214 ~~r~~~pedvA~~v~fL~s~~~--itG~~i~VdGG 246 (254)
T d2gdza1 214 YYGILDPPLIANGLITLIEDDA--LNGAIMKITTS 246 (254)
T ss_dssp HHCCBCHHHHHHHHHHHHHCTT--CSSCEEEEETT
T ss_pred CCCCcCHHHHHHHHHHHHcCCC--CCCCEEEECCC
Confidence 6788889999999999998753 45555444443
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=6e-46 Score=334.91 Aligned_cols=249 Identities=22% Similarity=0.270 Sum_probs=208.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..||++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++++ .+.++..++||++
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~~D~~ 66 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-----------------LGAQGVAIQADIS 66 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH-----------------cCCCceEecCCCC
Confidence 4589999999999999999999999999999975 555667788888876 5678999999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++.+++|+||+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|++ .+++++++|.
T Consensus 67 ~~~~v~~~~~~~~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~~iii~s~ 142 (259)
T d1ja9a_ 67 KPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSI 142 (259)
T ss_dssp SHHHHHHHHHHHHHHHSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhc---CCcccccccc
Confidence 999999999999999999999999999987 588999999999999999999999999999999975 3567777766
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH-----HH
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----AR 243 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~ 243 (347)
.+...+.|++..|++||+|+.+|+|+|++|++++|||||+|+||+++|+|.......... .......+++. ..
T Consensus 143 ~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 220 (259)
T d1ja9a_ 143 AAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAP--GGYKGMPQEKIDEGLANM 220 (259)
T ss_dssp GGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTST--TCCTTCCHHHHHHHHHHT
T ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhh--hhcccCCHHHHHHHHHhC
Confidence 455667899999999999999999999999999999999999999999987543221111 01111123332 23
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+++|+..|+|+++++.||+++...++++..+..||++
T Consensus 221 ~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 221 NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 35678888999999999999999877777777777665
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=4.6e-46 Score=331.96 Aligned_cols=235 Identities=22% Similarity=0.255 Sum_probs=197.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..++ .+.++.++++|++++
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~Dls~~ 63 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA--------------------LEAEAIAVVADVSDP 63 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--------------------CCSSEEEEECCTTSH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------------------cCCceEEEEecCCCH
Confidence 479999999999999999999999999999999999887665544 345788999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++|+++|+|++ .+.|+++||.
T Consensus 64 ~~i~~~~~~i~~~~g~iDiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~-- 137 (241)
T d2a4ka1 64 KAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSV-- 137 (241)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCC--
T ss_pred HHHHHHHHHHHHHhCCccEecccccccc-ccchhhhhcccccccccccccccccccccccccccc---ccceeecccc--
Confidence 9999999999999999999999999987 589999999999999999999999999999999875 3567666654
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.|++..|+++|+|+++|+++||+|++++|||||+|+||+|+|++.....+... .+...+.+++++.
T Consensus 138 a~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~----------~~~~~~~p~~r~~ 207 (241)
T d2a4ka1 138 AGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAW----------EQEVGASPLGRAG 207 (241)
T ss_dssp TTCCHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHH----------HHHHHTSTTCSCB
T ss_pred ccccccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHH----------HHHHhCCCCCCCc
Confidence 344557889999999999999999999999999999999999999998754332111 1223345577888
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|+|+++++.||+++...++++..+..+|+|
T Consensus 208 ~p~dva~~v~fL~S~~s~~itG~~i~vDGG~ 238 (241)
T d2a4ka1 208 RPEEVAQAALFLLSEESAYITGQALYVDGGR 238 (241)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhcchhCCCcCceEEeCCCc
Confidence 8899999999999999877777777777765
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-45 Score=330.15 Aligned_cols=239 Identities=22% Similarity=0.333 Sum_probs=198.6
Q ss_pred CCcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEec
Q 019009 6 DEHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC 85 (347)
Q Consensus 6 ~~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (347)
+.+|. ||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++.. .+.++.++.|
T Consensus 5 M~~lk-~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~---------------~~~~~~~~~~ 68 (257)
T d1xg5a_ 5 MERWR-DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG---------------YPGTLIPYRC 68 (257)
T ss_dssp CGGGT-TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---------------CSSEEEEEEC
T ss_pred CCCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---------------CCceEEEEEc
Confidence 45555 5999999999999999999999999999999999999999999998742 2358999999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCcEEEE
Q 019009 86 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFN 164 (347)
Q Consensus 86 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g~Iv~ 164 (347)
|++++++++++++++.++||+||+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++++ .+|+||+
T Consensus 69 Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~ 147 (257)
T d1xg5a_ 69 DLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIIN 147 (257)
T ss_dssp CTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEE
Confidence 999999999999999999999999999999987 58999999999999999999999999999999998763 4689999
Q ss_pred EcCCCCCCC--CCCCcchhhhHHHHHHHHHHHHHhHh--cCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH
Q 019009 165 MDGAGSGGS--STPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET 240 (347)
Q Consensus 165 vsS~~~~~~--~~~~~~~Y~asKaal~~~~~~La~el--~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~ 240 (347)
+||. ++.. +.+....|++||+|+.+|+|+|+.|+ +++||+||+|+||+++|++......... .+.
T Consensus 148 isS~-~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~----------~~~ 216 (257)
T d1xg5a_ 148 INSM-SGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP----------EKA 216 (257)
T ss_dssp ECCG-GGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH----------HHH
T ss_pred Eech-HhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhH----------HHH
Confidence 9987 4543 44566789999999999999999998 7889999999999999998644322111 122
Q ss_pred HHHHHhhhhhhccccccceeeccchHHHHHHh
Q 019009 241 VARTLVPRIRVVKGSGKAINYLTPPRILLALV 272 (347)
Q Consensus 241 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 272 (347)
.++.++.++..|+|++.++.||+++...++++
T Consensus 217 ~~~~~~~r~~~pedvA~~v~fL~s~~a~~itG 248 (257)
T d1xg5a_ 217 AATYEQMKCLKPEDVAEAVIYVLSTPAHIQIG 248 (257)
T ss_dssp HHHHC---CBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCChhcCeEC
Confidence 33445566667777777777888776644443
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.6e-45 Score=324.18 Aligned_cols=228 Identities=17% Similarity=0.214 Sum_probs=192.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+||++|||||++|||+++|+.|+++|++|++++|+++.+++ . ...++.||+++.
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~------------------------~--~~~~~~~Dv~~~ 56 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR------------------------S--GHRYVVCDLRKD 56 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH------------------------T--CSEEEECCTTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh------------------------c--CCcEEEcchHHH
Confidence 47999999999999999999999999999999999865432 1 234578999863
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
++.+.+++|+||+||||||+.. ..++.+.+.++|++++++|+.+++.++|+++|+|+++ +.|+||+++|. .
T Consensus 57 ------~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~S~-~ 127 (234)
T d1o5ia_ 57 ------LDLLFEKVKEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSF-S 127 (234)
T ss_dssp ------HHHHHHHSCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-G
T ss_pred ------HHHHHHHhCCCcEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-ccccccccccc-c
Confidence 4556678899999999999877 5889999999999999999999999999999999987 57999999987 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
+..+.+....|++||+|+++|+|+||.|++++|||||+|+||+++|++.......... .+...+.+++|+.
T Consensus 128 ~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~---------~~~~~~~pl~R~~ 198 (234)
T d1o5ia_ 128 VISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK---------KQVESQIPMRRMA 198 (234)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH---------HHHHTTSTTSSCB
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHH---------HHHHhcCCCCCCc
Confidence 7788899999999999999999999999999999999999999999986543221110 1112234577888
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.|+|++..+.||+++...+++++.+..+|+|.
T Consensus 199 ~pediA~~v~fL~S~~s~~itG~~i~vDGG~s 230 (234)
T d1o5ia_ 199 KPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 230 (234)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CHHHHHHHHHHHhChhhcCCcCcEEEECcccc
Confidence 88888889999999998788888777777763
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=1e-44 Score=329.10 Aligned_cols=248 Identities=20% Similarity=0.243 Sum_probs=207.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++++ .+.++.++.+|++
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~~D~~ 78 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-----------------NGSDAACVKANVG 78 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh-----------------hCCceeeEeCCCC
Confidence 468999999999999999999999999999999887 4567777787776 4568999999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|+++++++++++.+++|+||++|||+|... ..++.+.+.++|++++++|+.+++.++++++|+|++ .|++++++|+
T Consensus 79 ~~~~v~~~~~~~~~~~g~idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~ 154 (272)
T d1g0oa_ 79 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSI 154 (272)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeecccccccccc---cccccccccc
Confidence 999999999999999999999999999887 588999999999999999999999999999999975 4678888877
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHH------HH
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET------VA 242 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~------~a 242 (347)
.+...+.++...|+++|+|+++|+|+||.||+++|||||+|+||+|+|++............ ....+++ ..
T Consensus 155 ~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (272)
T d1g0oa_ 155 TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNG---ENLSNEEVDEYAAVQ 231 (272)
T ss_dssp GGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTC---TTCCHHHHHHHHHHH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcc---cccchHHHHHHHHHc
Confidence 44556778889999999999999999999999999999999999999998654322111100 0111222 22
Q ss_pred HHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 243 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..+++|+..|+|++.++.||+++...++++..+..||++
T Consensus 232 ~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 232 WSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp SCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred cCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 335678888999999999999998877666666666653
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.6e-45 Score=334.49 Aligned_cols=229 Identities=23% Similarity=0.239 Sum_probs=196.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC---------hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS---------SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~---------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
.||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++.. +..
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~ 65 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR--------------------RGG 65 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH--------------------TTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh--------------------ccc
Confidence 57999999999999999999999999999998664 4456666666654 234
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
.+.+|++|.++++++++++.++||+||+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ +.|+
T Consensus 66 ~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~ 143 (302)
T d1gz6a_ 66 KAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGR 143 (302)
T ss_dssp EEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEE
T ss_pred ccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-CCcE
Confidence 5678999999999999999999999999999999987 5899999999999999999999999999999999987 5899
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
|||+||. ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||++.|++.... +++
T Consensus 144 IV~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---------------~~~- 206 (302)
T d1gz6a_ 144 IIMTASA-SGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---------------PED- 206 (302)
T ss_dssp EEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---------------CHH-
T ss_pred EEEeCCh-hhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---------------cHh-
Confidence 9999998 67788999999999999999999999999999999999999999988753221 122
Q ss_pred HHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcccc
Q 019009 242 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD 283 (347)
Q Consensus 242 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (347)
+.+...|++++..+.||+++.. ++++..+..+|+|..
T Consensus 207 ----~~~~~~PedvA~~v~fL~S~~a-~itG~~i~vdGG~~~ 243 (302)
T d1gz6a_ 207 ----LVEALKPEYVAPLVLWLCHESC-EENGGLFEVGAGWIG 243 (302)
T ss_dssp ----HHHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETTEEE
T ss_pred ----hHhcCCHHHHHHHHHHHcCCCc-CCCCcEEEeCCCcee
Confidence 2233457888888889999875 568888888887753
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1e-44 Score=326.27 Aligned_cols=242 Identities=16% Similarity=0.121 Sum_probs=197.3
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.||++||||||+ |||+++|++|+++|++|++++|+++..++. +++.. ...+..++++|++
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~-----------------~~~~~~~~~~D~~ 68 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAE-----------------ALGGALLFRADVT 68 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHH-----------------HTTCCEEEECCTT
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhh-----------------ccCcccccccccC
Confidence 579999999986 999999999999999999999987655443 33333 2346778999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
|+++++++++++.+++|+||+||||||+... ..++.+.+.++|++.+++|+.+++.++|+++|+|++ +|+||++
T Consensus 69 ~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~i 145 (256)
T d1ulua_ 69 QDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTL 145 (256)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEE
Confidence 9999999999999999999999999998541 245678899999999999999999999999999974 5899999
Q ss_pred cCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHH
Q 019009 166 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 245 (347)
Q Consensus 166 sS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~ 245 (347)
||. ++..+.|+...|++||+|+++|+|+||.||+++|||||+|+||+++|++........ .. ..+.....+
T Consensus 146 sS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~--~~------~~~~~~~~p 216 (256)
T d1ulua_ 146 TYY-ASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT--KM------YDRVAQTAP 216 (256)
T ss_dssp ECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CH--HH------HHHHHHHST
T ss_pred eeh-HhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhH--HH------HHHHHhcCC
Confidence 998 678889999999999999999999999999999999999999999999865432211 11 012233456
Q ss_pred hhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 246 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
++|+..|+|++.++.||+++...+++++.+..||+|.
T Consensus 217 l~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 217 LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 7888889999999999999998888888888777763
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=4e-43 Score=322.00 Aligned_cols=247 Identities=21% Similarity=0.216 Sum_probs=208.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||++||||||+|||+++|++|+++|++|++++|+.++++++.+++.+. .+.++.++.+|+++
T Consensus 23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~----------------~g~~~~~~~~D~~~ 86 (294)
T d1w6ua_ 23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ----------------TGNKVHAIQCDVRD 86 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh----------------cCCceEEEEecccC
Confidence 45799999999999999999999999999999999999999999988764 34678899999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++++++++.+.++++++|+||||||... ..++.+.+.++++..+.+|+.+.+.+++...+.+......+.|++++|.
T Consensus 87 ~~~v~~~~~~~~~~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~- 164 (294)
T d1w6ua_ 87 PDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI- 164 (294)
T ss_dssp HHHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT-
T ss_pred hHHHHHHhhhhhhhccccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccc-
Confidence 99999999999999999999999999987 5888999999999999999999999999988888776567788888776
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhh
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 249 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~ 249 (347)
++..+.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++............ .+.....+++|+
T Consensus 165 ~~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~-------~~~~~~~pl~R~ 237 (294)
T d1w6ua_ 165 YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFE-------KEMIGRIPCGRL 237 (294)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHH-------HHHHTTCTTSSC
T ss_pred hhhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHH-------HHHhhcCCCCCC
Confidence 6777888999999999999999999999999999999999999999998654432211111 122334467888
Q ss_pred hhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 250 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
..|+|++..+.||+++...++++..+..+|++
T Consensus 238 ~~pediA~~v~fL~sd~s~~itG~~i~vDGG~ 269 (294)
T d1w6ua_ 238 GTVEELANLAAFLCSDYASWINGAVIKFDGGE 269 (294)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred CCHHHHHHHHHHHhCchhcCCCCcEEEECCCh
Confidence 88999999999999998866677666666654
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-44 Score=318.74 Aligned_cols=239 Identities=18% Similarity=0.220 Sum_probs=196.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||++|||||++|||+++|+.|+++|++|++++|++++++++.+ ...+....+|+.+.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------------------~~~~~~~~~d~~~~ 62 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------------------YPGIQTRVLDVTKK 62 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------------------STTEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------------------ccCCceeeeecccc
Confidence 46999999999999999999999999999999999887654322 12466788899886
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+.++.. .+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|.++ +.|+||+++|..+
T Consensus 63 ~~~~~~----~~~~~~id~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~~~ 136 (245)
T d2ag5a1 63 KQIDQF----ANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVAS 136 (245)
T ss_dssp HHHHHH----HHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBT
T ss_pred cccccc----ccccccceeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeechhh
Confidence 665554 456689999999999987 5889999999999999999999999999999999987 5899999998744
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 250 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~ 250 (347)
...+.+...+|+++|+|+++|+|+||.|++++|||||+|+||+|+|++............ ........+.+++|+.
T Consensus 137 ~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~----~~~~~~~~~~pl~R~~ 212 (245)
T d2ag5a1 137 SVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPE----EARNDFLKRQKTGRFA 212 (245)
T ss_dssp TTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHH----HHHHHHHHTCTTSSCE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhH----HHHHHHHhcCCCCCCc
Confidence 456788999999999999999999999999999999999999999998653221100000 0001123344567888
Q ss_pred hccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 251 VVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.|+|+++.+.||+++...++++..+..||+|
T Consensus 213 ~pedva~~v~fL~s~~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 213 TAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (245)
T ss_dssp EHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred CHHHHHHHHHHHhChhhCCCcCceEEeCCCc
Confidence 8999999999999999888888887777766
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-42 Score=313.37 Aligned_cols=223 Identities=18% Similarity=0.216 Sum_probs=178.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEE---EEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVV---VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vi---l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.|+|||||||+|||+++|+.|+++|++|+ +++|+.+..+++.+..++... .+.++.++.||++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~--------------~~~~~~~~~~Dv~ 67 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALAC--------------PPGSLETLQLDVR 67 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTC--------------CTTSEEEEECCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhc--------------cCCceEEEecccc
Confidence 38899999999999999999999998754 456666554444433333111 4568999999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++. +|.+|+||||||+.. ..++.+.+.|+|++++++|+.|+++++++++|+|+++ +.|+|||+||.
T Consensus 68 ~~~~~~~~~~~~~--~g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-~~G~Iv~isS~ 143 (285)
T d1jtva_ 68 DSKSVAAARERVT--EGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSV 143 (285)
T ss_dssp CHHHHHHHHHTCT--TSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEG
T ss_pred chHhhhhhhhhcc--ccchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-CCCceEEEech
Confidence 9999999998874 378999999999987 5889999999999999999999999999999999987 58999999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh--------------------
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK-------------------- 228 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-------------------- 228 (347)
++..+.|+...|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|.........+
T Consensus 144 -~g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T d1jtva_ 144 -GGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHS 222 (285)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred -hhcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999997654321110
Q ss_pred -hhhhhccCCHHHHHHHHhhhhhhcc
Q 019009 229 -QMFNIICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 229 -~~~~~~~~~pe~~a~~~~~~~~~~~ 253 (347)
........+||++|+.++..+..+.
T Consensus 223 ~~~~~~~~~~PeeVA~~v~~~~~~~~ 248 (285)
T d1jtva_ 223 KQVFREAAQNPEEVAEVFLTALRAPK 248 (285)
T ss_dssp HHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred hhhhcccCCCHHHHHHHHHHHHhCCC
Confidence 0011123478899988887776443
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-42 Score=312.19 Aligned_cols=212 Identities=21% Similarity=0.235 Sum_probs=181.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
++++++|||||++|||+++|++|+++ |++|++++|++++++++.++|++ .+.++.++.||++
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dvs 63 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-----------------EGLSPRFHQLDID 63 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-----------------TTCCCEEEECCTT
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEEecC
Confidence 34577799999999999999999986 89999999999999999999987 4567889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.++++++++++.+++|+||+||||||+.. ..+..+.+.++|+++|++|++|+++++++++|+|++ .|+|||++|.
T Consensus 64 ~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~ 139 (275)
T d1wmaa1 64 DLQSIRALRDFLRKEYGGLDVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSI 139 (275)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCccccccc
Confidence 999999999999999999999999999987 477788889999999999999999999999999964 5899999985
Q ss_pred CCCC-----------------------------------------CCCCCcchhhhHHHHHHHHHHHHHhHhcC----CC
Q 019009 169 GSGG-----------------------------------------SSTPLTAVYGSTKCGLRQLQASLFKESKR----SK 203 (347)
Q Consensus 169 ~~~~-----------------------------------------~~~~~~~~Y~asKaal~~~~~~La~el~~----~g 203 (347)
. +. ........|++||+++..|++.+++||++ .|
T Consensus 140 ~-~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~ 218 (275)
T d1wmaa1 140 M-SVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDK 218 (275)
T ss_dssp H-HHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred c-eeccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2 11 11223357999999999999999999864 58
Q ss_pred eEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhhhhhccc
Q 019009 204 VGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKG 254 (347)
Q Consensus 204 I~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~ 254 (347)
|+||+|+||+|+|+|..... ..+||++|+.++.....+++
T Consensus 219 I~vn~v~PG~v~T~m~~~~~-----------~~~pee~A~~~~~~a~~~~~ 258 (275)
T d1wmaa1 219 ILLNACCPGWVRTDMAGPKA-----------TKSPEEGAETPVYLALLPPD 258 (275)
T ss_dssp CEEEEEECCSBCSTTTCTTC-----------SBCHHHHTHHHHHHHSCCTT
T ss_pred eEEEEEecccccCCcccCcc-----------cCCHHHHHHHHHHHHcCChh
Confidence 99999999999999864332 22799999888866544443
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.3e-42 Score=311.39 Aligned_cols=193 Identities=23% Similarity=0.198 Sum_probs=173.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~---~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.||+++|||||+|||+++|++|++ +|++|++++|++++++++.++|.... .+.++.+++||+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~---------------~~~~~~~~~~Dv 69 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ---------------PDLKVVLAAADL 69 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTSEEEEEECCT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhc---------------CCceEEEEEccC
Confidence 369999999999999999999996 79999999999999999999998753 245899999999
Q ss_pred CCHHHHHHHHHHHHh----hcCCccEEEEcCCCCC--CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC-CCc
Q 019009 88 CEPADVQKLSNFAVN----EFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGG 160 (347)
Q Consensus 88 s~~~~v~~~~~~i~~----~~g~iD~li~nAG~~~--~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~g 160 (347)
+++++++++++.+.+ .++.+|+||||||+.. +..++.+.+.++|++++++|+.++++++++++|+|++++ ..|
T Consensus 70 s~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g 149 (259)
T d1oaaa_ 70 GTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSK 149 (259)
T ss_dssp TSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEE
T ss_pred CCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcc
Confidence 999999999998876 3467999999999854 246688999999999999999999999999999998863 258
Q ss_pred EEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccccc
Q 019009 161 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 221 (347)
Q Consensus 161 ~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~ 221 (347)
+||++||. ++..+.|++..|++||+|+++|+++|+.| ++|||||+|+||+|+|+|...
T Consensus 150 ~Iv~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~ 207 (259)
T d1oaaa_ 150 TVVNISSL-CALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQL 207 (259)
T ss_dssp EEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHH
T ss_pred cccccccc-cccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHH
Confidence 99999998 78889999999999999999999999999 579999999999999998643
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-41 Score=305.24 Aligned_cols=219 Identities=20% Similarity=0.239 Sum_probs=193.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+..||++||||||+|||+++|++|+++|++|++++|++++++++.+++... .+..+..+.+|++
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~----------------~~~~~~~~~~d~~ 74 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL----------------GAASAHYIAGTME 74 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------TCSEEEEEECCTT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh----------------hcccchhhhhhhh
Confidence 367899999999999999999999999999999999999999998887664 4567889999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
+.+.+..+.+.+.+.+|.+|++|||||... ..++.+.+.|++++++++|+.+++.+++.++|+|+++ +|+||++||.
T Consensus 75 ~~~~~~~~~~~~~~~~g~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~ 151 (269)
T d1xu9a_ 75 DMTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSL 151 (269)
T ss_dssp CHHHHHHHHHHHHHHHTSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEG
T ss_pred hHHHHHHHHHHHHHHhCCcccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccc
Confidence 999999999999999999999999999987 5788899999999999999999999999999999864 6899999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~ 246 (347)
++..+.|+...|++||+|+++|+++|+.|++ +.||+||+|+||+|+|+|........ ......+||++|+.++
T Consensus 152 -~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~----~~~~~~~~e~~a~~i~ 226 (269)
T d1xu9a_ 152 -AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----VHMQAAPKEECALEII 226 (269)
T ss_dssp -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----GGGGCBCHHHHHHHHH
T ss_pred -hhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC----ccccCCCHHHHHHHHH
Confidence 7889999999999999999999999999997 46799999999999999865432211 1223347999999998
Q ss_pred hhhhh
Q 019009 247 PRIRV 251 (347)
Q Consensus 247 ~~~~~ 251 (347)
.....
T Consensus 227 ~~~~~ 231 (269)
T d1xu9a_ 227 KGGAL 231 (269)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 76543
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=1.1e-41 Score=305.64 Aligned_cols=213 Identities=21% Similarity=0.257 Sum_probs=175.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC-C
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-E 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls-~ 89 (347)
.||+||||||++|||+++|++|+++|++|++++|+.++.++. ++++... .+.++.++.+|++ +
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~---------------~~~~~~~~~~d~~~~ 67 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAIN---------------PKVNITFHTYDVTVP 67 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHC---------------TTSEEEEEECCTTSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhC---------------CCCCEEEEEeecCCC
Confidence 479999999999999999999999999999999988776544 3443322 3468999999998 6
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC--CCcEEEEEcC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDG 167 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~--~~g~Iv~vsS 167 (347)
.++++++++++.+++|+||+||||||.. +.++|++++++|++|+++++++++|+|.+++ .+|+||+++|
T Consensus 68 ~~~~~~~~~~~~~~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS 138 (254)
T d1sbya1 68 VAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEec
Confidence 7789999999999999999999999963 2467899999999999999999999997652 4689999999
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc--h----hhhhhhccCCHHHH
Q 019009 168 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--N----KQMFNIICELPETV 241 (347)
Q Consensus 168 ~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~--~----~~~~~~~~~~pe~~ 241 (347)
. ++..+.+++..|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|........ . .........+||++
T Consensus 139 ~-~~~~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v 217 (254)
T d1sbya1 139 V-TGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQC 217 (254)
T ss_dssp G-GGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHH
T ss_pred h-hhccCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHH
Confidence 8 788899999999999999999999999999999999999999999999865432211 1 11122223467777
Q ss_pred HHHHhhhh
Q 019009 242 ARTLVPRI 249 (347)
Q Consensus 242 a~~~~~~~ 249 (347)
|+.++..+
T Consensus 218 a~~~~~~~ 225 (254)
T d1sbya1 218 GQNFVKAI 225 (254)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 77665443
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=3.8e-41 Score=301.44 Aligned_cols=193 Identities=19% Similarity=0.231 Sum_probs=167.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHH---HCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFL---LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la---~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
+|+|||||||+|||+++|++|+ ++|++|++++|++++++++.+ +.+ .+.++.+++||++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~-----------------~~~~~~~~~~Dvs 63 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAK-----------------NHSNIHILEIDLR 63 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHH-----------------HCTTEEEEECCTT
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHh-----------------cCCcEEEEEEEec
Confidence 6999999999999999999996 579999999999998876543 333 2357889999999
Q ss_pred CHHHHHHHHHHHHh--hcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC----------
Q 019009 89 EPADVQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ---------- 156 (347)
Q Consensus 89 ~~~~v~~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~---------- 156 (347)
|+++++++++++.+ ++++||+||||||+.....++.+.+.++|++++++|++|++.++++++|+|+++
T Consensus 64 ~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~ 143 (248)
T d1snya_ 64 NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMG 143 (248)
T ss_dssp CGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSS
T ss_pred cHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccc
Confidence 99999999999854 678999999999987655678899999999999999999999999999999863
Q ss_pred CCCcEEEEEcCCCCC--CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccC
Q 019009 157 PKGGHIFNMDGAGSG--GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 222 (347)
Q Consensus 157 ~~~g~Iv~vsS~~~~--~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~ 222 (347)
...|+||+++|..+. ..+.+++.+|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|....
T Consensus 144 ~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~ 211 (248)
T d1snya_ 144 VGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS 211 (248)
T ss_dssp TTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT
T ss_pred ccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc
Confidence 136899999987322 234567789999999999999999999999999999999999999997543
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.7e-40 Score=297.48 Aligned_cols=210 Identities=16% Similarity=0.217 Sum_probs=168.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
|+||||||++|||+++|++|+++|+ +|++++|+.++++++.++ .+.++.++.||++|.
T Consensus 4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~--------------------~~~~~~~~~~Dvs~~ 63 (250)
T d1yo6a1 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI--------------------KDSRVHVLPLTVTCD 63 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC--------------------CCTTEEEEECCTTCH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh--------------------hCCceEEEEEecCCH
Confidence 9999999999999999999999996 689999999887654321 345788999999999
Q ss_pred HHHHHHHHHHHhhcCC--ccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC----------C
Q 019009 91 ADVQKLSNFAVNEFGS--IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----------K 158 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~--iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~----------~ 158 (347)
++++++++++.+.++. ||+||||||+..+..++.+.+.++|++++++|++|+++++++++|+|++++ .
T Consensus 64 ~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~ 143 (250)
T d1yo6a1 64 KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVS 143 (250)
T ss_dssp HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccce
Confidence 9999999999988764 999999999876557788999999999999999999999999999998642 2
Q ss_pred CcEEEEEcCCCC------CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhh
Q 019009 159 GGHIFNMDGAGS------GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 232 (347)
Q Consensus 159 ~g~Iv~vsS~~~------~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~ 232 (347)
.++++++++... ...+.....+|++||+|+.+|+++|+.|+++.||+||+|+||+|+|+|.....
T Consensus 144 ~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~--------- 214 (250)
T d1yo6a1 144 RAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA--------- 214 (250)
T ss_dssp TCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------
T ss_pred eccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC---------
Confidence 478999876421 11223345679999999999999999999999999999999999999864321
Q ss_pred hccCCHHHHHHHHhhhhhhcc
Q 019009 233 IICELPETVARTLVPRIRVVK 253 (347)
Q Consensus 233 ~~~~~pe~~a~~~~~~~~~~~ 253 (347)
..+||+.++.++..+..++
T Consensus 215 --~~~~e~~a~~~~~~~~~~~ 233 (250)
T d1yo6a1 215 --ALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp ------HHHHHHHHHHHTTCC
T ss_pred --CCCHHHHHHHHHHHHhcCC
Confidence 2368899988888776543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-39 Score=286.10 Aligned_cols=193 Identities=22% Similarity=0.251 Sum_probs=169.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .+.....+|+.+
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--------------------~~~~~~~~~~~~ 62 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--------------------NNCVFAPADVTS 62 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--------------------TTEEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--------------------CCcccccccccc
Confidence 468999999999999999999999999999999999999988777653 356788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-----CCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKG 159 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-----~~~ 159 (347)
.++++...+.+...++.+|.+++|+++... ..++.+.+.|+|++++++|+.++++++|+++|+|..+ .++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (248)
T d2o23a1 63 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQR 142 (248)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCC
T ss_pred cccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCc
Confidence 999999999999999999999999887542 2456678899999999999999999999999998754 246
Q ss_pred cEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCc
Q 019009 160 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS 223 (347)
Q Consensus 160 g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~ 223 (347)
|+||++||. ++..+.|++.+|++||+|+++|+|+|+.|++++|||||+|+||+++|+|.....
T Consensus 143 G~Ii~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~ 205 (248)
T d2o23a1 143 GVIINTASV-AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP 205 (248)
T ss_dssp EEEEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------
T ss_pred eEEEEecch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC
Confidence 899999998 677889999999999999999999999999999999999999999999876543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=6.9e-39 Score=291.73 Aligned_cols=256 Identities=14% Similarity=0.113 Sum_probs=187.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhhhhhhhcCCC-CcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGS-SKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dls~~ 90 (347)
.++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+..+......... .........+..+.+|+++.
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 589999999999999999999999999998765 5567777788876533211100000 00001123345567889999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHH--------------HHHHhhhhHHHHHHHHHHHHhHc-
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE--------------QIVSTNLVGSILCTREAMRVMRD- 155 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~--------------~~~~vN~~g~~~l~~~~lp~l~~- 155 (347)
++++++++++.++||+||+||||||+.. ..++.+.+.++|+ .++.+|+.+++++++.+.+.+..
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 9999999999999999999999999987 4777777766654 47899999999999999987643
Q ss_pred ----CCCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhh
Q 019009 156 ----QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 231 (347)
Q Consensus 156 ----~~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~ 231 (347)
+...++||+++|. ....+.++..+|++||+|+++|+++||+||+++|||||+|+||++.+... ......+
T Consensus 162 ~~~~~~~~~~ii~~~s~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--~~~~~~~--- 235 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--MPPAVWE--- 235 (284)
T ss_dssp CGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--SCHHHHH---
T ss_pred HHHhcCCCCcccccccc-cccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc--CCHHHHH---
Confidence 2246789999887 67788889999999999999999999999999999999999998655431 1111110
Q ss_pred hhccCCHHHHHHHH-hhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 232 NIICELPETVARTL-VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 232 ~~~~~~pe~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+...+.+ .+|+..|+|++.++.||+++...++++..+..||+|.
T Consensus 236 -------~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~s 280 (284)
T d1e7wa_ 236 -------GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280 (284)
T ss_dssp -------HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -------HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChh
Confidence 1111222 3667778888888899999998788888888777763
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.8e-38 Score=285.24 Aligned_cols=243 Identities=14% Similarity=0.116 Sum_probs=201.1
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..||++|||||++ |||+++|+.|+++|++|++++|+++..+.. +++.. ...+...+.+|+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~-----------------~~~~~~~~~~~~ 64 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAA-----------------QLGSDIVLQCDV 64 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHH-----------------HTTCCCEEECCT
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHh-----------------hcCCcceeeccc
Confidence 4689999999998 899999999999999999999997654443 44443 234567889999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~----~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
++.+++...++.+.+.++++|++||||+.... .........+.+...+.+|+.+.+.+++.+.|.|.+ ++.||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii 141 (258)
T d1qsga_ 65 AEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALL 141 (258)
T ss_dssp TCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEE
T ss_pred chHHHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEE
Confidence 99999999999999999999999999998642 112245667889999999999999999999999863 56799
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
++||. ++..+.|....|++||+|+++|+++||+||+++|||||+|+||+|+|++......... . ..+...+
T Consensus 142 ~iss~-~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~--~------~~~~~~~ 212 (258)
T d1qsga_ 142 TLSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRK--M------LAHCEAV 212 (258)
T ss_dssp EEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHH--H------HHHHHHH
T ss_pred Eecch-hhccCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhh--H------HHHHHhC
Confidence 99987 6778889999999999999999999999999999999999999999998654321111 0 1223345
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.+++|+..|+|++..+.||+++...++++..+..||+|.
T Consensus 213 ~pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 213 TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp STTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence 667888899999999999999998888888888888774
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-37 Score=276.24 Aligned_cols=204 Identities=14% Similarity=0.066 Sum_probs=168.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.||+||||||++|||+++|++|+++|++|++++|++.+ .......+.+|.++.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~---------------------------~~~~~~~~~~~~~~~ 53 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE---------------------------EASASVIVKMTDSFT 53 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT---------------------------TSSEEEECCCCSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc---------------------------cccccceeecccCcH
Confidence 37999999999999999999999999999999987643 123455678899989
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g--~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
++++.+.+.+.+.++ +||+||||||......++.+.+.|+|++++++|+.+++.++++++|+|++ +|+||++||.
T Consensus 54 ~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~ 130 (236)
T d1dhra_ 54 EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAK 130 (236)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG
T ss_pred HHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccH
Confidence 999888888876644 69999999997553456677788999999999999999999999999964 5899999998
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHh
Q 019009 169 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 246 (347)
Q Consensus 169 ~~~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~ 246 (347)
++..+.|++..|++||+|+++|+++|+.|++ ++||+||+|+||+++|+|.....+.... ....+||++|+.+.
T Consensus 131 -~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~----~~~~~pe~va~~~~ 205 (236)
T d1dhra_ 131 -AALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF----SSWTPLEFLVETFH 205 (236)
T ss_dssp -GGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG----GGSEEHHHHHHHHH
T ss_pred -HHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchh----hcCCCHHHHHHHHH
Confidence 6888899999999999999999999999998 5799999999999999986543221111 11125788888776
Q ss_pred hhh
Q 019009 247 PRI 249 (347)
Q Consensus 247 ~~~ 249 (347)
..+
T Consensus 206 ~l~ 208 (236)
T d1dhra_ 206 DWI 208 (236)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.1e-38 Score=293.70 Aligned_cols=261 Identities=11% Similarity=0.101 Sum_probs=192.9
Q ss_pred CCeEEEEc--CCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE------
Q 019009 12 TCRWFSVV--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI------ 83 (347)
Q Consensus 12 ~k~vlITG--as~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 83 (347)
+|++|||| +++|||++||+.|+++|++|++++|+............+........... . ........
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~ 76 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD-K----KMNILDMLPFDASF 76 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTT-E----ECCEEEEEECCTTC
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHH-h----hhhhhhccccccee
Confidence 69999999 66899999999999999999999998776544433322211111000000 0 00111222
Q ss_pred --------------ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 019009 84 --------------ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTRE 148 (347)
Q Consensus 84 --------------~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~ 148 (347)
.+|+++.++++++++.+.++||+||+||||||...+ ..++.+.+.++|++++++|+++.+.++|+
T Consensus 77 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~ 156 (329)
T d1uh5a_ 77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKY 156 (329)
T ss_dssp SSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred hhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHH
Confidence 347778889999999999999999999999997653 35788999999999999999999999999
Q ss_pred HHHHhHcCCCCcEEEEEcCCCCCCCCCCC-cchhhhHHHHHHHHHHHHHhHhcC-CCeEEEEeeCCcccCcccccCcccc
Q 019009 149 AMRVMRDQPKGGHIFNMDGAGSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQ 226 (347)
Q Consensus 149 ~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~-~~~Y~asKaal~~~~~~La~el~~-~gI~v~~i~PG~v~T~~~~~~~~~~ 226 (347)
++|+|++ +|+||++||. ++..+.|+ ...|++||+|+++|+|+||.||++ +|||||+|+||+|+|++....+...
T Consensus 157 ~~~~m~~---~GsIv~iss~-~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~ 232 (329)
T d1uh5a_ 157 FVNIMKP---QSSIISLTYH-ASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN 232 (329)
T ss_dssp HGGGEEE---EEEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---
T ss_pred HHhhccc---ccccccceee-hhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchh
Confidence 9999964 5899999987 56677776 567999999999999999999986 6999999999999995433211000
Q ss_pred ------------------------------hhhhhhhccCCHH-----HHHHHHhhhhhhccccccceeeccchHHHHHH
Q 019009 227 ------------------------------NKQMFNIICELPE-----TVARTLVPRIRVVKGSGKAINYLTPPRILLAL 271 (347)
Q Consensus 227 ------------------------------~~~~~~~~~~~pe-----~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 271 (347)
............+ .....+++|...|+|++.++.||+|+...+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iT 312 (329)
T d1uh5a_ 233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAIT 312 (329)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred hhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCcc
Confidence 0000000000111 12233678889999999999999999998888
Q ss_pred hhhhhcCCcc
Q 019009 272 VTAWLRRGRW 281 (347)
Q Consensus 272 ~~~~~~~~~~ 281 (347)
++.+..||++
T Consensus 313 Gq~i~VDGG~ 322 (329)
T d1uh5a_ 313 GQTIYVDNGL 322 (329)
T ss_dssp SCEEEESTTG
T ss_pred CCeEEECCCc
Confidence 8888887776
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=1.5e-37 Score=281.75 Aligned_cols=262 Identities=12% Similarity=0.087 Sum_probs=197.2
Q ss_pred ccCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 9 WSCTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 9 ~~~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
+..||++|||||++ |||+++|++|+++|++|++++|+++ +++.++++.+. +....++.+|
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~-----------------~~~~~~~~~d 63 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE-----------------LNSPYVYELD 63 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH-----------------TTCCCEEECC
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh-----------------CCceeEeeec
Confidence 34689999999765 9999999999999999999999954 44556666552 3456788999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
+++.++++++++++.+.+|++|++|||+|+.... ....+...+.+...+.++.++.+.+.+.+.+.+. .++.|+
T Consensus 64 ~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~ 140 (274)
T d2pd4a1 64 VSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---NGASVL 140 (274)
T ss_dssp TTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEE
T ss_pred ccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc---cCccee
Confidence 9999999999999999999999999999986532 2333444555556666666655555555554432 344566
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
++++. +...+.+....|+++|+|+++|+++++.|++++|||||+|+||+++|++......... . .......
T Consensus 141 ~~s~~-~~~~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~--~------~~~~~~~ 211 (274)
T d2pd4a1 141 TLSYL-GSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRM--I------LKWNEIN 211 (274)
T ss_dssp EEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHH--H------HHHHHHH
T ss_pred eeccc-ccccccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHH--H------HHHHhhh
Confidence 66655 5677788889999999999999999999999999999999999999998654332111 0 1223345
Q ss_pred HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCcccccCCccc--cccchhhhhhh
Q 019009 244 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRAL--YAAEADRIRNW 300 (347)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 300 (347)
.+++++..|+|++..+.||+++...++++..+..||+|........ .+..+.++|..
T Consensus 212 ~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~ 270 (274)
T d2pd4a1 212 APLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDL 270 (274)
T ss_dssp STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHH
T ss_pred hhccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChhhccCCcccccccchhhhhhh
Confidence 5677888899999999999999988889999999998854433332 33344555544
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.4e-36 Score=269.33 Aligned_cols=202 Identities=15% Similarity=0.085 Sum_probs=165.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++||||||++|||+++|++|+++|++|++++|++++. ......+.+|+.+.++
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~ 55 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ---------------------------ADSNILVDGNKNWTEQ 55 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT---------------------------SSEEEECCTTSCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc---------------------------ccccceeccccCchhH
Confidence 4569999999999999999999999999999987531 1234556788888888
Q ss_pred HHHHHHHHHh--hcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 93 VQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 93 v~~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
.....+.+.. ++++||+||||||+.....++.+.+.+.|+.++++|+++++.++++++|+|++ +|+||++||. +
T Consensus 56 ~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~-~ 131 (235)
T d1ooea_ 56 EQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAA-A 131 (235)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG-G
T ss_pred HHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccH-H
Confidence 8877777766 45899999999998653345666667889999999999999999999999964 5899999998 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhc--CCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
+..+.|++.+|++||+|+++|+++|+.|++ +.+|+||+|+||+++|++.......... ....+|+++++.++..
T Consensus 132 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~----~~~~~~~~va~~~~~~ 207 (235)
T d1ooea_ 132 AMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH----SSWTPLSFISEHLLKW 207 (235)
T ss_dssp GGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCG----GGCBCHHHHHHHHHHH
T ss_pred hcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCcc----ccCCCHHHHHHHHHHH
Confidence 788999999999999999999999999998 5789999999999999986543322111 1123688888877644
Q ss_pred h
Q 019009 249 I 249 (347)
Q Consensus 249 ~ 249 (347)
+
T Consensus 208 l 208 (235)
T d1ooea_ 208 T 208 (235)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=9.8e-37 Score=279.26 Aligned_cols=258 Identities=17% Similarity=0.154 Sum_probs=189.8
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhh-hhhhhcCCCCcccccCceeeEEecC
Q 019009 10 SCTCRWFSVVSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLK-EGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 10 ~~~k~vlITGas~--GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
..||++|||||++ |||+++|+.|+++|++|++++|++............... ......+ . .....++..+..+
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDG--S--LMEIKKVYPLDAV 81 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTS--S--BCCEEEEEEECTT
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhh--h--hhhhhhhhhhhhh
Confidence 3579999999875 999999999999999999999987644333222111100 0000000 0 0000122222222
Q ss_pred ------------------CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 019009 87 ------------------VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTR 147 (347)
Q Consensus 87 ------------------ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~ 147 (347)
.++.++++++++++.++||+||+||||||.... ..++.+.+.|+|++++++|+.+++.+++
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 355667789999999999999999999998542 3678999999999999999999999999
Q ss_pred HHHHHhHcCCCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhc-CCCeEEEEeeCCcccCcccccCcccc
Q 019009 148 EAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMVLTDLLLSGSTIQ 226 (347)
Q Consensus 148 ~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~-~~gI~v~~i~PG~v~T~~~~~~~~~~ 226 (347)
+++|+|.+ ++.++++++........+....|+++|+++.++++.++.|++ ++|||||+|+||+++|++.......
T Consensus 162 ~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~- 237 (297)
T d1d7oa_ 162 HFLPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI- 237 (297)
T ss_dssp HHGGGEEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH-
T ss_pred HHHHHhhc---CCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC-
Confidence 99999875 355666665534445567778999999999999999999996 6899999999999999987543211
Q ss_pred hhhhhhhccCCHHHHHHHHhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 227 NKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 227 ~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+... .....+.+++|+..|+|++..+.||+++...+++++.+..||++.
T Consensus 238 -~~~~------~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s 286 (297)
T d1d7oa_ 238 -DTMI------EYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp -HHHH------HHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred -HHHH------HHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence 1110 112234457788889999999999999999888888888888764
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.5e-36 Score=265.42 Aligned_cols=227 Identities=21% Similarity=0.187 Sum_probs=179.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|++||||||+|||+++|++|+++|++|++++|+++. .+...+++|+++..
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------------------~~~~~~~~d~~~~~ 51 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------------------------EDLIYVEGDVTREE 51 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------------------SSSEEEECCTTCHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------------------ccceEeeccccchh
Confidence 4999999999999999999999999999999998642 35667899999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-----CCCcEEE
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIF 163 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-----~~~g~Iv 163 (347)
.+..+.+.....+ ..+.++++++.... .......+.+.+++++++|+.+++.+++.+++.+.+. .+.|+||
T Consensus 52 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii 130 (241)
T d1uaya_ 52 DVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIV 130 (241)
T ss_dssp HHHHHHHHHHHHS-CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEE
T ss_pred hhHHHHHhhhccc-cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeee
Confidence 9999988877664 45666677765431 2445667889999999999999999999999995432 2579999
Q ss_pred EEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHH
Q 019009 164 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR 243 (347)
Q Consensus 164 ~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~ 243 (347)
|+||. ++..+.|+...|++||+|+++|+|+|+.|++++|||||+|+||+|+|++............ ..+
T Consensus 131 ~isS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~----------~~~ 199 (241)
T d1uaya_ 131 NTASV-AAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASL----------AAQ 199 (241)
T ss_dssp EECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHH----------HTT
T ss_pred eecch-hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHH----------Hhc
Confidence 99998 6788899999999999999999999999999999999999999999998765443222111 111
Q ss_pred HH-hhhhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 244 TL-VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
.+ .+|+..|+|++..+.||++. .+++++.+..||++
T Consensus 200 ~~~~~R~g~pedvA~~v~fL~s~--~~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 200 VPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGAL 236 (241)
T ss_dssp CCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred CCCCCCCcCHHHHHHHHHHHHhC--CCCCCCEEEECCcc
Confidence 11 25566677777777788864 35666666666655
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=2.7e-36 Score=272.25 Aligned_cols=249 Identities=13% Similarity=0.092 Sum_probs=191.3
Q ss_pred ccCCCeEEEEc--CCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 9 WSCTCRWFSVV--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 9 ~~~~k~vlITG--as~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
|..||++|||| +++|||+++|++|+++|++|++++|+.+++.+.+.+ . .+.+...++||
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~---~----------------~~~~~~~~~~d 63 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---R----------------LPAKAPLLELD 63 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---T----------------SSSCCCEEECC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH---H----------------cCCceeeEeee
Confidence 56689999999 467999999999999999999999998876433222 1 34567789999
Q ss_pred CCCHHHHHHHHHHHHhhc---CCccEEEEcCCCCC----CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCC
Q 019009 87 VCEPADVQKLSNFAVNEF---GSIDIWINNAGTNK----GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 159 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~---g~iD~li~nAG~~~----~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~ 159 (347)
+++.+++.++++.+.+.+ ++||++|||||+.. ...++.+.+.+++.+.+.+|+.+.+...+.+.+++.. +
T Consensus 64 v~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 140 (268)
T d2h7ma1 64 VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---G 140 (268)
T ss_dssp TTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---E
T ss_pred cccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---c
Confidence 999999999999987664 67999999999753 1346678899999999999999999999998877542 3
Q ss_pred cEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchh-hhhhhccCCH
Q 019009 160 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK-QMFNIICELP 238 (347)
Q Consensus 160 g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~p 238 (347)
+.| +++|. ....+.|++..|+++|+|+.+|+++++.|++++|||||+|+||+|+|++.......... ..........
T Consensus 141 ~~i-~~~s~-~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 218 (268)
T d2h7ma1 141 GSI-VGMDF-DPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE 218 (268)
T ss_dssp EEE-EEEEC-CCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred ccc-ccccc-cccccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHH
Confidence 444 44444 46677888999999999999999999999999999999999999999986432211110 0000000011
Q ss_pred HHHH-HHHhh-hhhhccccccceeeccchHHHHHHhhhhhcCCcc
Q 019009 239 ETVA-RTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW 281 (347)
Q Consensus 239 e~~a-~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 281 (347)
+.+. +.++. ++..|+|+++++.||+++...++++..+..||++
T Consensus 219 ~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~ 263 (268)
T d2h7ma1 219 EGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 263 (268)
T ss_dssp HHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence 2222 22333 3788999999999999998877888877777766
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=8.3e-36 Score=268.58 Aligned_cols=240 Identities=20% Similarity=0.212 Sum_probs=185.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC---
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC--- 88 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls--- 88 (347)
.++||||||+|||+++|++|+++|++|++++|+.++ .+++.+++.+. .+.+...+.+|+.
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 65 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA----------------RAGSAVLCKGDLSLSS 65 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCSSST
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh----------------cCCceEEEecccccch
Confidence 589999999999999999999999999999998664 56677777764 3345666665554
Q ss_pred -CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCC-----------CCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC
Q 019009 89 -EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-----------QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ 156 (347)
Q Consensus 89 -~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~-----------~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~ 156 (347)
+.+.++++++.+.+++|+||+||||||+..+ .++. +...+.+...+.+|+.+++...+...+.+...
T Consensus 66 ~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (266)
T d1mxha_ 66 SLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEG 144 (266)
T ss_dssp THHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---
T ss_pred hHHHHHHHHHHHHHHHhCCCCEEEECCccCCC-Ccccccccccchhcccccccccccccccccccccchhhhhccccccc
Confidence 3567888888999999999999999998763 3322 23355677889999999999999988887653
Q ss_pred ----CCCcEEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhh
Q 019009 157 ----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 232 (347)
Q Consensus 157 ----~~~g~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~ 232 (347)
...+.++++++. .+..+.|++..|++||+|+++|+++||.|++++|||||+|+||+++|++..... ..+
T Consensus 145 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~--~~~---- 217 (266)
T d1mxha_ 145 GAWRSRNLSVVNLCDA-MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQE--TQE---- 217 (266)
T ss_dssp ----CCCEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHH--HHH----
T ss_pred cccccccccchhhhhc-cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHH--HHH----
Confidence 135688888876 678888999999999999999999999999999999999999999998653211 101
Q ss_pred hccCCHHHHHHHHhhh-hhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 233 IICELPETVARTLVPR-IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 233 ~~~~~pe~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
+...+.++.+ ...|+|++.++.||+++...++++..+..||+|.
T Consensus 218 ------~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~ 262 (266)
T d1mxha_ 218 ------EYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262 (266)
T ss_dssp ------HHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ------HHHhcCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence 1111122322 3567777777789999998888888888888774
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=2.6e-33 Score=251.67 Aligned_cols=219 Identities=20% Similarity=0.213 Sum_probs=172.9
Q ss_pred CCcccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---hHHHHHHHHHHHHhhhhhhhcCCCCcccccCceee
Q 019009 6 DEHWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA 81 (347)
Q Consensus 6 ~~~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (347)
+..|..++++|||||++|||+++|++|+++|+ +|++++|+. +..++..+++++ .+.++.
T Consensus 3 ~~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~g~~v~ 65 (259)
T d2fr1a1 3 DDEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-----------------LGARTT 65 (259)
T ss_dssp SCCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEE
T ss_pred ccccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-----------------cccccc
Confidence 56788899999999999999999999999998 699999975 345566666655 567899
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcE
Q 019009 82 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH 161 (347)
Q Consensus 82 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~ 161 (347)
++.||++|.++++++++.+.+. +++|++|||+|... ..++.+.+.++|+.++++|+.+++++.+++ ... +.++
T Consensus 66 ~~~~Dv~d~~~~~~~~~~i~~~-~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~-~~~~ 138 (259)
T d2fr1a1 66 VAACDVTDRESVRELLGGIGDD-VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELT----REL-DLTA 138 (259)
T ss_dssp EEECCTTCHHHHHHHHHTSCTT-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTS-CCSE
T ss_pred ccccccchHHHHHHhhcccccc-cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHHh----hcc-CCce
Confidence 9999999999999999987654 68999999999988 588999999999999999999999887754 333 4689
Q ss_pred EEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHH
Q 019009 162 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 241 (347)
Q Consensus 162 Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~ 241 (347)
||++||. ++..+.+++..|+++|+++++|++.++. .||+|++|+||.+.++.+.................+|+++
T Consensus 139 iv~~SS~-a~~~g~~~~~~YaAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~ 213 (259)
T d2fr1a1 139 FVLFSSF-ASAFGAPGLGGYAPGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETA 213 (259)
T ss_dssp EEEEEEH-HHHTCCTTCTTTHHHHHHHHHHHHHHHH----TTCCCEEEEECCBC------------CTTTTEECBCHHHH
T ss_pred Eeeecch-hhccCCcccHHHHHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHH
Confidence 9999998 6788899999999999999988776654 5999999999998765433322111111122344579999
Q ss_pred HHHHhhhhhhcc
Q 019009 242 ARTLVPRIRVVK 253 (347)
Q Consensus 242 a~~~~~~~~~~~ 253 (347)
++.+...+...+
T Consensus 214 ~~~l~~~l~~~~ 225 (259)
T d2fr1a1 214 CRALQNALDRAE 225 (259)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHhCCC
Confidence 998877766544
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.98 E-value=2.7e-33 Score=250.81 Aligned_cols=219 Identities=15% Similarity=0.132 Sum_probs=161.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+||||||++|||+++|++|+++|++|++++|+.++ ..+|+.+.+
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~----------------------------------~~~d~~~~~ 46 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE----------------------------------VIADLSTAE 46 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS----------------------------------EECCTTSHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH----------------------------------HHHHhcCHH
Confidence 5999999999999999999999999999999997531 357999999
Q ss_pred HHHHHHHHHHhh-cCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 92 DVQKLSNFAVNE-FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 92 ~v~~~~~~i~~~-~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
..+....++..+ .+.+|++|||||+... .+.++....+|+.+...+.+..+|.+.+. ....+.++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~id~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 117 (257)
T d1fjha_ 47 GRKQAIADVLAKCSKGMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVAS 117 (257)
T ss_dssp HHHHHHHHHHTTCTTCCSEEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCCcEEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhh-ccCcceeeeeccc
Confidence 888876666554 4579999999997542 13467888999999999999999999876 3455655554311
Q ss_pred C--------------------------C-CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCc
Q 019009 171 G--------------------------G-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS 223 (347)
Q Consensus 171 ~--------------------------~-~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~ 223 (347)
. . ...++..+|++||+|+++|+|+||.||+++|||||+|+||+|+|++.....
T Consensus 118 ~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 197 (257)
T d1fjha_ 118 AHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL 197 (257)
T ss_dssp GSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------
T ss_pred cchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc
Confidence 1 1 122334579999999999999999999999999999999999999875433
Q ss_pred ccchhhhhhhccCCHHHHHH--HHhhhhhhccccccceeeccchHHHHHHhhhhhcCCccc
Q 019009 224 TIQNKQMFNIICELPETVAR--TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF 282 (347)
Q Consensus 224 ~~~~~~~~~~~~~~pe~~a~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 282 (347)
.... ..+..++ .+++|+..|+|++..+.||+++...++++..+..||+|.
T Consensus 198 ~~~~---------~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t 249 (257)
T d1fjha_ 198 QDPR---------YGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249 (257)
T ss_dssp --------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CCHH---------HHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence 2111 1122222 257888889999999999999999888888888888773
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.80 E-value=2.1e-21 Score=165.44 Aligned_cols=152 Identities=12% Similarity=0.035 Sum_probs=112.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+. .++....+|++|
T Consensus 21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~d~~~ 82 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR------------------FKVNVTAAETAD 82 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------------------HTCCCEEEECCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc------------------cchhhhhhhccc
Confidence 35799999999999999999999999999999999999999998888763 234567899999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++++++ +++|+||||||+.. ...+.|.|+..+++|+.+.++.+..+.+.+......++++..++.
T Consensus 83 ~~~~~~~~-------~~iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 149 (191)
T d1luaa1 83 DASRAEAV-------KGAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRA- 149 (191)
T ss_dssp HHHHHHHT-------TTCSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEE-
T ss_pred HHHHHHHh-------cCcCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEE-
Confidence 99887764 57999999999743 356889999999999988887665544433332112222221111
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQA 193 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~ 193 (347)
.+. ...+...|+++|+++..|++
T Consensus 150 ~g~-~~~g~~~y~~sk~a~~~l~~ 172 (191)
T d1luaa1 150 FGA-LGIGGLKLKLHRACIAKLFE 172 (191)
T ss_dssp ECH-HHHHHHHHHHHHHHHHHHTS
T ss_pred Eec-cCcCcHHHHHHHHHHHHHHh
Confidence 110 01123569999999988764
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=6.3e-17 Score=150.39 Aligned_cols=174 Identities=12% Similarity=-0.021 Sum_probs=126.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
|+||||||||.||..++++|+++|++|++++|.... ++....+... ...++.++.+|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl 64 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT-----------------CNPKFHLHYGDL 64 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--------------------------------------CCEEECCCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh-----------------cCCCeEEEEeec
Confidence 899999999999999999999999999999995432 2222221111 335789999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.++++++++.+ .+|++||.|+.... . .+.++.+..+++|+.|+.++++++...-.+ +..++|++||
T Consensus 65 ~d~~~~~~~~~~~-----~~d~v~h~aa~~~~-~----~~~~~~~~~~~~Nv~gt~nllea~~~~~~~--~~~r~i~~SS 132 (357)
T d1db3a_ 65 SDTSNLTRILREV-----QPDEVYNLGAMSHV-A----VSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQAST 132 (357)
T ss_dssp SCHHHHHHHHHHH-----CCSEEEECCCCCTT-T----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEE
T ss_pred CCHHHHHHHHhcc-----CCCEEEEeeccccc-c----hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEEc
Confidence 9999999998765 68999999998542 1 122345667899999999999887654222 3457999987
Q ss_pred CCC-CC---C------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 168 AGS-GG---S------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 168 ~~~-~~---~------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
... +. . +......|+.||.+.+.+++.+++.+ |+.+..+.|+.+..|.
T Consensus 133 ~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~ 190 (357)
T d1db3a_ 133 SELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPR 190 (357)
T ss_dssp GGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred hhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCC
Confidence 521 11 0 11224679999999999999988875 6888899998887764
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=5.4e-16 Score=132.78 Aligned_cols=194 Identities=14% Similarity=0.043 Sum_probs=126.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+|+||||||+||.+++++|+++|++|+++.|+++++... ....+.++.+|++|.+
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~gD~~d~~ 59 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------------------GPRPAHVVVGDVLQAA 59 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------------------SCCCSEEEESCTTSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----------------------cccccccccccccchh
Confidence 48899999999999999999999999999999998874211 2245788999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.++++ +.|++|+++|...+.. ... ++..+..+ +++.+++. +-.++|++||.+..
T Consensus 60 ~l~~al~-------~~d~vi~~~g~~~~~~---~~~---------~~~~~~~~----l~~aa~~~-~v~r~i~~ss~~~~ 115 (205)
T d1hdoa_ 60 DVDKTVA-------GQDAVIVLLGTRNDLS---PTT---------VMSEGARN----IVAAMKAH-GVDKVVACTSAFLL 115 (205)
T ss_dssp HHHHHHT-------TCSEEEECCCCTTCCS---CCC---------HHHHHHHH----HHHHHHHH-TCCEEEEECCGGGT
T ss_pred hHHHHhc-------CCCEEEEEeccCCchh---hhh---------hhHHHHHH----HHHHHHhc-CCCeEEEEeeeecc
Confidence 9887764 6899999999754211 111 22233333 34444544 35689999876322
Q ss_pred CC---CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhhhccCCHHHHHHHHhhh
Q 019009 172 GS---STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 248 (347)
Q Consensus 172 ~~---~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~ 248 (347)
.. ..+....|...|.+.+.+. ...|+....|.||.+........................+++|+.++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~ 188 (205)
T d1hdoa_ 116 WDPTKVPPRLQAVTDDHIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRC 188 (205)
T ss_dssp SCTTCSCGGGHHHHHHHHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHT
T ss_pred CCCccccccccccchHHHHHHHHH-------HhcCCceEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHH
Confidence 11 1122235566666655443 2358999999999885432211111111111112224689999999999
Q ss_pred hhhccccccce
Q 019009 249 IRVVKGSGKAI 259 (347)
Q Consensus 249 ~~~~~~~~~~~ 259 (347)
+..++-.++.+
T Consensus 189 l~~~~~~g~~~ 199 (205)
T d1hdoa_ 189 LTTDEYDGHST 199 (205)
T ss_dssp TSCSTTTTCEE
T ss_pred hCCCCCCCEEE
Confidence 88877666543
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.65 E-value=4.3e-15 Score=139.27 Aligned_cols=177 Identities=12% Similarity=0.075 Sum_probs=128.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh----------------HHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE----------------SVRMTVTELEENLKEGMMAAGGSSKKNL 75 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~----------------~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 75 (347)
||+||||||||-||.+++++|+++|++|++++.-.. ...+........
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 64 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL---------------- 64 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH----------------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh----------------
Confidence 688999999999999999999999999999862111 111122222221
Q ss_pred cCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHc
Q 019009 76 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD 155 (347)
Q Consensus 76 ~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~ 155 (347)
.+.++.++.+|++|.+.++++++.. ++|+|||.|+... .+....+.+.....+++|+.|+.++..++...=
T Consensus 65 ~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-- 135 (393)
T d1i24a_ 65 TGKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-- 135 (393)
T ss_dssp HCCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred cCCCcEEEEccCCCHHHHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHhc--
Confidence 2357899999999999999998765 7999999998753 333445667778899999999999999876542
Q ss_pred CCCCcEEEEEcCCCCCCC-----------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCC
Q 019009 156 QPKGGHIFNMDGAGSGGS-----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG 212 (347)
Q Consensus 156 ~~~~g~Iv~vsS~~~~~~-----------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG 212 (347)
...++++.||...... +......|+.||.+.+.+++.+++++ ++.+.++.|+
T Consensus 136 --~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~ 210 (393)
T d1i24a_ 136 --EECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG 210 (393)
T ss_dssp --TTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred --cccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccc
Confidence 2345666665421100 11122469999999999999888874 7899999998
Q ss_pred cccCcc
Q 019009 213 MVLTDL 218 (347)
Q Consensus 213 ~v~T~~ 218 (347)
.+..+.
T Consensus 211 ~v~G~~ 216 (393)
T d1i24a_ 211 VVYGVK 216 (393)
T ss_dssp EEECSC
T ss_pred cccCCC
Confidence 887653
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=9.6e-16 Score=141.04 Aligned_cols=171 Identities=15% Similarity=0.097 Sum_probs=124.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+||||||||-||..++++|+++|++|++++|.....+.....++.. ...++.++++|++|.+.+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d~~~l 65 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALM 65 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH----------------HTSCCEEEECCTTCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh----------------cCCCCEEEEeecCCHHHH
Confidence 3999999999999999999999999999976322211112222211 235788999999999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCC
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS 173 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~ 173 (347)
.++++.. ++|++||.|+.... ..+.++-+..+++|+.|+.++++++... +-.++|++||...-..
T Consensus 66 ~~~~~~~-----~~d~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-----~v~~~i~~Ss~~vy~~ 130 (338)
T d1udca_ 66 TEILHDH-----AIDTVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGD 130 (338)
T ss_dssp HHHHHHT-----TCSEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCS
T ss_pred HHHHhcc-----CCCEEEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHh-----CCCEEEecCcceEEcc
Confidence 8887753 69999999986421 1223345688999999999999988765 2346888887521100
Q ss_pred -----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 174 -----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 174 -----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
.......|+.+|.+.+.+.+....+. .++.+..+.|+.+-.+
T Consensus 131 ~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 183 (338)
T d1udca_ 131 QPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA 183 (338)
T ss_dssp CCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred ccccccccccccCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEec
Confidence 11234679999999999998877774 4678888888887765
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.64 E-value=1.6e-15 Score=139.73 Aligned_cols=213 Identities=10% Similarity=0.064 Sum_probs=143.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...||+||||||+|-||..++++|+++|++|+.+.|+..+............ .......+..|++
T Consensus 8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~ 72 (342)
T d1y1pa1 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY---------------PGRFETAVVEDML 72 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS---------------TTTEEEEECSCTT
T ss_pred CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccc---------------cccccEEEecccc
Confidence 3568999999999999999999999999999999999877655443322211 2234556778999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA 168 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~ 168 (347)
|.+++.+++. .+|+++|+++... ...+. ...+.+|+.|+.++++++... +.-.++|++||.
T Consensus 73 ~~~~~~~~~~-------~~~~v~~~a~~~~-----~~~~~---~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~ 133 (342)
T d1y1pa1 73 KQGAYDEVIK-------GAAGVAHIASVVS-----FSNKY---DEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSST 133 (342)
T ss_dssp STTTTTTTTT-------TCSEEEECCCCCS-----CCSCH---HHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCG
T ss_pred chhhhhhhcc-------cchhhhhhccccc-----ccccc---cccccchhhhHHHHHHhhhcc----cccccccccccc
Confidence 9988776653 6899999998633 12222 455678999988888776442 234689999885
Q ss_pred CCCCCCCC------------------------------CcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 169 GSGGSSTP------------------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 169 ~~~~~~~~------------------------------~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.+...+.+ ....|+.+|.+.+.+++.++++.. .++++.+|+|+.+-.|.
T Consensus 134 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~ 212 (342)
T d1y1pa1 134 VSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTI 212 (342)
T ss_dssp GGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCC
T ss_pred eeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCC
Confidence 32221111 123699999999999999988875 46888999999887664
Q ss_pred cccCcccc--hhhhh---h------------hccCCHHHHHHHHhhhhhhccccc
Q 019009 219 LLSGSTIQ--NKQMF---N------------IICELPETVARTLVPRIRVVKGSG 256 (347)
Q Consensus 219 ~~~~~~~~--~~~~~---~------------~~~~~pe~~a~~~~~~~~~~~~~~ 256 (347)
........ ..... . ......+++|+..+..+..+...+
T Consensus 213 ~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~~~g 267 (342)
T d1y1pa1 213 FDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIER 267 (342)
T ss_dssp SCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCS
T ss_pred CCccccccchHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCccccc
Confidence 32211110 00000 0 001246789988887777665444
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.62 E-value=4.7e-15 Score=136.80 Aligned_cols=172 Identities=17% Similarity=0.137 Sum_probs=121.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+||||||||-||..++++|+++|++|+++++....-.+........ ...++.++.+|++|.++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~----------------~~~~v~~~~~Dl~d~~~ 65 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL----------------TKHHIPFYEVDLCDRKG 65 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH----------------HTSCCCEEECCTTCHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh----------------cccCCeEEEeecCCHHH
Confidence 79999999999999999999999999999875322111111111111 23468889999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
++++++.. ++|++||+|+...+ ....+.-.....+|+.++.++.+++... +-.++|++||...-.
T Consensus 66 l~~~~~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~N~~~t~~ll~~~~~~-----~i~~~i~~SS~~vyg 130 (347)
T d1z45a2 66 LEKVFKEY-----KIDSVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYG 130 (347)
T ss_dssp HHHHHHHS-----CCCEEEECCSCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGC
T ss_pred HHHHHhcc-----CCCEEEEccccccc-----cccccCcccccccchhhhHHHHHHHHhc-----ccceEEeecceeeec
Confidence 99987643 79999999986431 1122344677889999999999998654 234688888852110
Q ss_pred --------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccC
Q 019009 173 --------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 216 (347)
Q Consensus 173 --------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T 216 (347)
.+......|+.||.+.+.+.+.+.+.. ..++.+..+.|+.+-.
T Consensus 131 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g 187 (347)
T d1z45a2 131 DATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIG 187 (347)
T ss_dssp CGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEEC
T ss_pred CcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEe
Confidence 111123579999999999998887653 3467777777765543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1.2e-14 Score=133.50 Aligned_cols=174 Identities=12% Similarity=-0.011 Sum_probs=123.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
|++|||||+|.||..++++|+++|++|+.++|.... ++......... ...++.++.+|+
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl 65 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH----------------IEGNMKLHYGDL 65 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-------------------------CEEEEECCT
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh----------------ccCCcEEEEeec
Confidence 445999999999999999999999999999996431 21111111110 234688999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+|.+.+.++++.. .++++++.++.... ....+.....+++|+.|+.++..++..+-.. +..++|++||
T Consensus 66 ~d~~~~~~~~~~~-----~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~--~~~~~i~~SS 133 (347)
T d1t2aa_ 66 TDSTCLVKIINEV-----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQAST 133 (347)
T ss_dssp TCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEE
T ss_pred CCchhhHHHHhhc-----ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCC--CCcEEEEecc
Confidence 9999999988765 68899998875431 2233445667899999999999887665332 2457999987
Q ss_pred CCC-CC---------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 168 AGS-GG---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 168 ~~~-~~---------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
... +. .+......|+.||.+.+.+++.+++.+ ++.+..+.|+.+..|
T Consensus 134 ~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp 190 (347)
T d1t2aa_ 134 SELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP 190 (347)
T ss_dssp GGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred hheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCC
Confidence 521 11 011224579999999999999888774 678888888777665
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.58 E-value=1.5e-14 Score=132.42 Aligned_cols=177 Identities=11% Similarity=-0.008 Sum_probs=127.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-----HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-----SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-----~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
|++|||||||.||..+++.|+++|++|+.++|... ++.......... ....+.++.+|+
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Di 65 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV----------------NKALMKLHYADL 65 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC------------------------CCEEEEECCT
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc----------------cccceEEEEccc
Confidence 89999999999999999999999999999998532 221111111110 234678899999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++.+++.+.++.. ++|++||.|+.... ....+.-...+.+|..+...+..++.....+.....+++..||
T Consensus 66 ~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss 135 (339)
T d1n7ha_ 66 TDASSLRRWIDVI-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS 135 (339)
T ss_dssp TCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred cCHHHHHHHHhhh-----ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeeccc
Confidence 9999999987754 79999999986431 1223455678899999999999888766544323445666555
Q ss_pred CCCCC---------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 168 AGSGG---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 168 ~~~~~---------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
..... .+......|+.+|.+.+.+++...+++ |+.+..+.|+.|-.|.
T Consensus 136 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~ 192 (339)
T d1n7ha_ 136 SEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPR 192 (339)
T ss_dssp GGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred ceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCC
Confidence 42111 112234689999999999999888774 6899999998887764
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.54 E-value=1.2e-13 Score=119.20 Aligned_cols=209 Identities=12% Similarity=0.084 Sum_probs=130.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe--EEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDR--VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~--Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+++||||||||.||+++++.|+++|++ |+...|++++.+. ...++..+.+|++
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~------------------------~~~~~~~~~~d~~ 57 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK------------------------IGGEADVFIGDIT 57 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH------------------------TTCCTTEEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh------------------------ccCCcEEEEeeec
Confidence 3689999999999999999999999965 5666788765432 2346778999999
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCC--------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG 160 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g 160 (347)
+.+++.++++ ++|.+||+|+....... ..............+|+.+...+........ .+
T Consensus 58 ~~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 125 (252)
T d2q46a1 58 DADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-----VK 125 (252)
T ss_dssp SHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-----CS
T ss_pred cccccccccc-------cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-----cc
Confidence 9999887764 68999999987531110 1111123345567789999888877665543 45
Q ss_pred EEEEEcCCCCCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccc--hhhh--hhhccC
Q 019009 161 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--NKQM--FNIICE 236 (347)
Q Consensus 161 ~Iv~vsS~~~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~--~~~~--~~~~~~ 236 (347)
.....++........+....+...+.......+.+..+ .|+++..+.||.+..+......... .... ......
T Consensus 126 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i 202 (252)
T d2q46a1 126 HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTV 202 (252)
T ss_dssp EEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEE
T ss_pred ccccccccccCCCCcccccccccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccCcccccCCCCeE
Confidence 67777665322222222222233333333333333333 5789999999999776432211110 0000 111123
Q ss_pred CHHHHHHHHhhhhhhccccccc
Q 019009 237 LPETVARTLVPRIRVVKGSGKA 258 (347)
Q Consensus 237 ~pe~~a~~~~~~~~~~~~~~~~ 258 (347)
..+++|+.++..+..++..++.
T Consensus 203 ~~~Dva~a~~~~l~~~~~~g~~ 224 (252)
T d2q46a1 203 PRADVAEVCIQALLFEEAKNKA 224 (252)
T ss_dssp EHHHHHHHHHHHTTCGGGTTEE
T ss_pred EHHHHHHHHHHHhCCccccCcE
Confidence 5789999998888776654443
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.52 E-value=6.4e-14 Score=127.20 Aligned_cols=171 Identities=13% Similarity=-0.037 Sum_probs=123.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
|+||||||||.||++++++|+++|++|+.++|...... ..++++. ...++.++.+|++|.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~------------------~~~~~~~~~~Dl~d~~ 62 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG------------------IEGDIQYEDGDMADAC 62 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT------------------CGGGEEEEECCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc------------------ccCCcEEEEccccChH
Confidence 78999999999999999999999999999998654211 1112221 2246889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
.+.+++... ..++++++|+... .. ...+.....+.+|+.|+.+++.++...- ...++++.||....
T Consensus 63 ~~~~~~~~~-----~~~~~~~~a~~~~--~~---~~~~~~~~~~~~n~~g~~~~l~~~~~~~----~~~~~i~~Ss~~~~ 128 (321)
T d1rpna_ 63 SVQRAVIKA-----QPQEVYNLAAQSF--VG---ASWNQPVTTGVVDGLGVTHLLEAIRQFS----PETRFYQASTSEMF 128 (321)
T ss_dssp HHHHHHHHH-----CCSEEEECCSCCC--HH---HHTTSHHHHHHHHTHHHHHHHHHHHHHC----TTSEEEEEEEGGGG
T ss_pred Hhhhhhccc-----ccccccccccccc--cc---ccccchHHHHhhhhhchHHHHHHHHHhC----CCcccccccchhhc
Confidence 999887764 6788888887643 11 1112346788999999999988876542 23467777664211
Q ss_pred -C---------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 172 -G---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 -~---------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. .+......|+.+|.+.+.+.+.++.++ ++.+..+.|+.+..|.
T Consensus 129 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~ 182 (321)
T d1rpna_ 129 GLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL 182 (321)
T ss_dssp CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred CcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCC
Confidence 0 111234689999999999999998875 6788888887766654
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.52 E-value=7.8e-14 Score=128.05 Aligned_cols=175 Identities=13% Similarity=0.045 Sum_probs=123.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.|++|||||||.||.+++++|.++|++|+.++|....-....+.+....... ....+.++.+|+.|..
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~d~~d~~ 83 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK------------QWSNFKFIQGDIRNLD 83 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH------------HHTTEEEEECCTTSHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc------------ccCCeeEEeecccccc
Confidence 4899999999999999999999999999999863221111111111110000 1246888999999988
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS- 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~- 170 (347)
...... ...+.++|.+..... ..+.++....+++|+.|+..+.+++... +..++|++||...
T Consensus 84 ~~~~~~-------~~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-----~~~~~i~~SS~~vy 146 (341)
T d1sb8a_ 84 DCNNAC-------AGVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTY 146 (341)
T ss_dssp HHHHHH-------TTCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGG
T ss_pred cccccc-------ccccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhc-----CCceEEEcccceee
Confidence 765543 267888888865321 2245667789999999999999988653 2457999988621
Q ss_pred CC---------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 GG---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 ~~---------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
+. .+......|+.+|.+.+.+++.+++.. ++++..+.|+.+.++.
T Consensus 147 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~ 200 (341)
T d1sb8a_ 147 GDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRR 200 (341)
T ss_dssp TTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTT
T ss_pred CCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccC
Confidence 10 111234689999999999999998875 6888889998877654
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.52 E-value=2.5e-14 Score=132.74 Aligned_cols=211 Identities=12% Similarity=0.105 Sum_probs=139.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+||||||+|.||.+++++|+++|++|+++ ++...... .+.+... ....++.++.+|++|.+.
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~---------------~~~~~~~~~~~Dl~d~~~ 64 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDI---------------SESNRYNFEHADICDSAE 64 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTT---------------TTCTTEEEEECCTTCHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhh---------------hhcCCcEEEEccCCCHHH
Confidence 48999999999999999999999976554 43221100 0011110 023468899999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCC----CCcEEEEEcCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNMDGA 168 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~----~~g~Iv~vsS~ 168 (347)
+.++++.. .+|+|||+|+...+ ..+.++-...+++|+.|+..+.+++........ +..++|++||.
T Consensus 65 l~~~~~~~-----~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~ 134 (361)
T d1kewa_ 65 ITRIFEQY-----QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD 134 (361)
T ss_dssp HHHHHHHH-----CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG
T ss_pred HHHHHHhC-----CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccc
Confidence 99887754 79999999986431 122334467899999999999999988754320 23479999885
Q ss_pred CCCC--------------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCc--ccc
Q 019009 169 GSGG--------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS--TIQ 226 (347)
Q Consensus 169 ~~~~--------------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~--~~~ 226 (347)
..-. .+......|+.||.+.+.+++.++..+ |+.+..+.|+.|-.|...... ...
T Consensus 135 ~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~ 211 (361)
T d1kewa_ 135 EVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLV 211 (361)
T ss_dssp GGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHH
T ss_pred eeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHH
Confidence 2110 001123569999999999999998875 688999999988776432110 000
Q ss_pred ------hhhh--hhh-----ccCCHHHHHHHHhhhhhhccc
Q 019009 227 ------NKQM--FNI-----ICELPETVARTLVPRIRVVKG 254 (347)
Q Consensus 227 ------~~~~--~~~-----~~~~pe~~a~~~~~~~~~~~~ 254 (347)
.+.+ ... .....+++++.++..+.....
T Consensus 212 i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~ 252 (361)
T d1kewa_ 212 ILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA 252 (361)
T ss_dssp HHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT
T ss_pred HHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCC
Confidence 0000 000 012578999998877766543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.51 E-value=1.5e-13 Score=126.42 Aligned_cols=175 Identities=15% Similarity=0.045 Sum_probs=127.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+||||||||.||..+++.|+++|++|++++|+..+.....+... ....+.++.+|++|.
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~i~~~~~Dl~d~ 68 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------------------VADGMQSEIGDIRDQ 68 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT------------------TTTTSEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh------------------cccCCeEEEeeccCh
Confidence 46999999999999999999999999999999998765433322211 124588999999999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
+.+.++++.. .+|+++|.|+.... ..+.+..+..+.+|+.|+..+.+++...- ....++..|+...
T Consensus 69 ~~l~~~~~~~-----~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~----~~~~~~~~s~~~~ 134 (356)
T d1rkxa_ 69 NKLLESIREF-----QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHVG----GVKAVVNITSDKC 134 (356)
T ss_dssp HHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHC----CCCEEEEECCGGG
T ss_pred Hhhhhhhhhc-----hhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhccc----ccccccccccccc
Confidence 9998887754 78999999986431 22345567789999999999988886542 2334555544322
Q ss_pred CCC-----------CCCCcchhhhHHHHHHHHHHHHHhHhc------CCCeEEEEeeCCcccCc
Q 019009 171 GGS-----------STPLTAVYGSTKCGLRQLQASLFKESK------RSKVGVHTASPGMVLTD 217 (347)
Q Consensus 171 ~~~-----------~~~~~~~Y~asKaal~~~~~~La~el~------~~gI~v~~i~PG~v~T~ 217 (347)
... .......|+.+|.+.+.+.+.++.++. ..++.+..+.|+.+..|
T Consensus 135 ~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp 198 (356)
T d1rkxa_ 135 YDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG 198 (356)
T ss_dssp BCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred ccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCC
Confidence 111 111235699999999999998887663 24688889998877654
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.5e-13 Score=126.30 Aligned_cols=172 Identities=16% Similarity=0.051 Sum_probs=120.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC------ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASR------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
|+||||||||-||.+++++|+++|++|++++| +.....+..+.+... ...++.++.+|
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D 66 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL----------------TGRSVEFEEMD 66 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH----------------HTCCCEEEECC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh----------------cCCCcEEEEee
Confidence 68999999999999999999999999999864 211111222222221 23578899999
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++|.+.+.+++.. ..+|+++|.|+.... ..+.++....+++|+.|...+..++... +-.+++++|
T Consensus 67 l~d~~~l~~~~~~-----~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-----~v~~~i~~s 131 (346)
T d1ek6a_ 67 ILDQGALQRLFKK-----YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKAH-----GVKNLVFSS 131 (346)
T ss_dssp TTCHHHHHHHHHH-----CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEE
T ss_pred ccccccccccccc-----cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhhc-----Ccccccccc
Confidence 9999999887764 368899999987531 1222334677899999999888876432 234688887
Q ss_pred CCCCCCC-----------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCc
Q 019009 167 GAGSGGS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 217 (347)
Q Consensus 167 S~~~~~~-----------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~ 217 (347)
|+..... .......|+.+|.+.+...+.+++.. .++....+.|+.+-++
T Consensus 132 s~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~ 191 (346)
T d1ek6a_ 132 SATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGA 191 (346)
T ss_dssp EGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECC
T ss_pred cceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceecc
Confidence 6522111 11123479999999999988877642 4677888888776654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.49 E-value=1.9e-13 Score=123.80 Aligned_cols=151 Identities=15% Similarity=0.093 Sum_probs=114.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+||||||||.||.+++++|+++|+.|+++.+.. .+|+.+.+.
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------------------------~~~~~~~~~ 45 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------------------ELNLLDSRA 45 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------------------TCCTTCHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------------------------hccccCHHH
Confidence 7899999999999999999999999988765321 258999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++.- .+|.++|+|+.... ...........+++|+.++.++++++... +-.++|++||.. ..
T Consensus 46 ~~~~~~~~-----~~d~v~~~a~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~v~~~i~~SS~~-vy 110 (315)
T d1e6ua_ 46 VHDFFASE-----RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSC-IY 110 (315)
T ss_dssp HHHHHHHH-----CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGG-GS
T ss_pred HHHHHhhc-----CCCEEEEcchhccc----cccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCce-Ec
Confidence 88877532 68999999976431 11223445567889999999988887553 245799999863 21
Q ss_pred CC----------------CCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 173 SS----------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 173 ~~----------------~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.+ .+....|+.||.+.+.+++.+.++. |+++..+.|+.|-.|.
T Consensus 111 g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~ 169 (315)
T d1e6ua_ 111 PKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH 169 (315)
T ss_dssp CTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred CCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence 11 1122469999999999999998875 7899999999887764
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.47 E-value=5.3e-14 Score=129.49 Aligned_cols=170 Identities=12% Similarity=0.102 Sum_probs=117.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|.||||||||-||..++++|+++|+.|.+++++.-.-......+ ......++.++.+|++|.+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~----------------~~~~~~~i~~~~~Di~d~~ 65 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----------------EAILGDRVELVVGDIADAE 65 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----------------GGGCSSSEEEEECCTTCHH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH----------------HHhhcCCeEEEEccCCCHH
Confidence 588999999999999999999999987666554321000000000 0013457889999999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS- 170 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~- 170 (347)
.+..++. ..|.++|.|+.... ....++.+..+++|+.|..+++.++... +.++|++||...
T Consensus 66 ~~~~~~~-------~~~~v~~~a~~~~~-----~~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vy 127 (346)
T d1oc2a_ 66 LVDKLAA-------KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVY 127 (346)
T ss_dssp HHHHHHT-------TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGG
T ss_pred HHHHHHh-------hhhhhhhhhhcccc-----cchhhCcccceeeehHhHHhhhhhhccc------cccccccccceEe
Confidence 9888753 57889999976431 1112334577899999999999877554 234666655411
Q ss_pred CCC---------------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 171 GGS---------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 171 ~~~---------------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
+.. .......|+.+|.+.+.+++.+.+++ |+++.++.|+.+-.|.
T Consensus 128 g~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~ 193 (346)
T d1oc2a_ 128 GDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPY 193 (346)
T ss_dssp CCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTT
T ss_pred cccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCC
Confidence 110 11123569999999999999888774 7999999999887753
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.46 E-value=1.1e-12 Score=119.33 Aligned_cols=155 Identities=15% Similarity=0.061 Sum_probs=109.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+||||||+|.||..++++|+++|++|+.+++-.. ...+....+. ...++.++.+|++|.++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~------------------~~~~~~~i~~Di~~~~~ 63 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS------------------SLGNFEFVHGDIRNKND 63 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH------------------TTCCCEEEECCTTCHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh------------------ccCCcEEEEcccCCHHH
Confidence 5899999999999999999999999999874221 1112222222 22568899999999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
+.++++.. ++|++||+|+.... ....++.+..+++|+.|+.++++++...- ....|++.|+.....
T Consensus 64 l~~~~~~~-----~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~~----~~~~i~~sS~~~~~~ 129 (338)
T d1orra_ 64 VTRLITKY-----MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYN----SNCNIIYSSTNKVYG 129 (338)
T ss_dssp HHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC----TTCEEEEEEEGGGGT
T ss_pred HHHHHHhc-----CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhccc----ccccccccccccccc
Confidence 99988755 68999999986431 12234457889999999999998876642 223455544331111
Q ss_pred C--------------------------CCCCcchhhhHHHHHHHHHHHHHhHhc
Q 019009 173 S--------------------------STPLTAVYGSTKCGLRQLQASLFKESK 200 (347)
Q Consensus 173 ~--------------------------~~~~~~~Y~asKaal~~~~~~La~el~ 200 (347)
. .......|+.+|...+.+.......+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~ 183 (338)
T d1orra_ 130 DLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG 183 (338)
T ss_dssp TCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence 0 111346799999999999988888764
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.45 E-value=3.3e-13 Score=124.80 Aligned_cols=167 Identities=14% Similarity=0.026 Sum_probs=121.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+.+.+||||||||-||.+++++|.++|++|++++|...... .. ......+..+|+.+
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~-----------------~~~~~~~~~~D~~~ 69 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TE-----------------DMFCDEFHLVDLRV 69 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CG-----------------GGTCSEEEECCTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hh-----------------hcccCcEEEeechh
Confidence 44567999999999999999999999999999987543210 00 11234577789999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+.+.++++ ++|++||.|+.... . ....+.....+.+|+.++..++.++... +-.++|++||..
T Consensus 70 ~~~~~~~~~-------~~d~Vih~a~~~~~-~---~~~~~~~~~~~~~n~~gt~~ll~~~~~~-----~vk~~i~~SS~~ 133 (363)
T d2c5aa1 70 MENCLKVTE-------GVDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSAC 133 (363)
T ss_dssp HHHHHHHHT-------TCSEEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGG
T ss_pred HHHHHHHhh-------cCCeEeeccccccc-c---cccccccccccccccchhhHHHHhHHhh-----Cccccccccccc
Confidence 887766553 68999999987541 1 1112345677889999999888887654 245799998863
Q ss_pred CCCC-----------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 SGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~~~~-----------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.... +......|+.||.+.+.+++.+.+++ |+.+..+.|+.+..+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~ 196 (363)
T d2c5aa1 134 IYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF 196 (363)
T ss_dssp GSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred cccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence 2110 01123579999999999999988875 7899999998887653
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=7.1e-13 Score=121.40 Aligned_cols=163 Identities=10% Similarity=0.015 Sum_probs=116.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+||||||||.||+.++++|+++| ++|+.+++..+...... ...++.++.+|+++.++
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----------------------~~~~~~~i~~Di~~~~~ 59 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------------------NHPHFHFVEGDISIHSE 59 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------------------TCTTEEEEECCTTTCSH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----------------------cCCCeEEEECccCChHH
Confidence 48999999999999999999999 58999888654322110 12468899999998877
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC-C
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-G 171 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~-~ 171 (347)
+.+.+.. ++|++||+|+.... ....++....+++|+.|+.++.+++... +.+++++||... +
T Consensus 60 ~~~~~~~------~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~~~~~~------~~~~~~~ss~~~~~ 122 (342)
T d2blla1 60 WIEYHVK------KCDVVLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYG 122 (342)
T ss_dssp HHHHHHH------HCSEEEECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGB
T ss_pred HHHHHHh------CCCccccccccccc-----cccccCCccccccccccccccccccccc------cccccccccccccc
Confidence 6553321 48999999997541 1222344678999999999999987442 335566665421 1
Q ss_pred CC----------------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 172 GS----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 ~~----------------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.. .......|+.||.+.+.+.+.+++.+ |+.+..+.|..+-.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~ 182 (342)
T d2blla1 123 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPR 182 (342)
T ss_dssp TCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSS
T ss_pred cccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeecccccccc
Confidence 10 00123579999999999999998885 6888888888777653
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=2.7e-13 Score=117.88 Aligned_cols=191 Identities=17% Similarity=0.115 Sum_probs=125.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
+|+||||||||.||.+++++|.++|. +|++.+|++.+... . ....+....+|+.+
T Consensus 14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~-----------------~~~~i~~~~~D~~~ 70 (232)
T d2bkaa1 14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------E-----------------AYKNVNQEVVDFEK 70 (232)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------G-----------------GGGGCEEEECCGGG
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------c-----------------ccceeeeeeecccc
Confidence 48999999999999999999999995 89999997653211 0 12356666778877
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+++.+. +.++|++||++|... .........++|+.++..+.+++.. . +-.++|.+|+..
T Consensus 71 ~~~~~~~-------~~~~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~fi~~Ss~~ 130 (232)
T d2bkaa1 71 LDDYASA-------FQGHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKA----G-GCKHFNLLSSKG 130 (232)
T ss_dssp GGGGGGG-------GSSCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTT
T ss_pred ccccccc-------ccccccccccccccc--------cccchhhhhhhcccccceeeecccc----c-CccccccCCccc
Confidence 6655443 347899999998632 1234456678899999888887743 2 356799998763
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCe-EEEEeeCCcccCcccccCccc---------chhhhhhhccCCHH
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLLLSGSTI---------QNKQMFNIICELPE 239 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI-~v~~i~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~pe 239 (347)
... .....|+.+|...+...+. .|. ++..+.||.+..+........ .............+
T Consensus 131 -~~~--~~~~~Y~~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~ 200 (232)
T d2bkaa1 131 -ADK--SSNFLYLQVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVV 200 (232)
T ss_dssp -CCT--TCSSHHHHHHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHH
T ss_pred -ccc--CccchhHHHHHHhhhcccc-------ccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHH
Confidence 222 2235799999988765432 233 577889999977643221110 00011111223568
Q ss_pred HHHHHHhhhhhhcccc
Q 019009 240 TVARTLVPRIRVVKGS 255 (347)
Q Consensus 240 ~~a~~~~~~~~~~~~~ 255 (347)
++|+.++..+..+.+.
T Consensus 201 dvA~a~i~~~~~~~~~ 216 (232)
T d2bkaa1 201 TVVRAMLNNVVRPRDK 216 (232)
T ss_dssp HHHHHHHHHHTSCCCS
T ss_pred HHHHHHHHHHhcCccC
Confidence 8888888776655543
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.42 E-value=4.6e-12 Score=117.86 Aligned_cols=180 Identities=14% Similarity=0.047 Sum_probs=122.9
Q ss_pred eEEEEcCCChHHHHHHHHHHH-CCCeEEEEeC---------ChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 14 RWFSVVSTRGLGKALAREFLL-SGDRVVVASR---------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~-~G~~Vil~~R---------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
+||||||+|-||..++++|++ .|++|+++++ ..+..+.....+..... .........+.++
T Consensus 4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 74 (383)
T d1gy8a_ 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDG---------PKPPWADRYAALE 74 (383)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCS---------SCCTTTTCCCEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhcc---------ccccccccceEEE
Confidence 689999999999999999986 6899999863 12222333333322110 0111123467888
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 163 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv 163 (347)
.+|++|.+.++++++. +.++|++||.|+.... ....+.....+++|+.+...+..++... +..+++
T Consensus 75 ~~Di~d~~~l~~~~~~----~~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~~~-----~~~~~~ 140 (383)
T d1gy8a_ 75 VGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKII 140 (383)
T ss_dssp ESCTTCHHHHHHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEE
T ss_pred ECcccCHHHhhhhhhc----cceeehhhcccccccc-----cccccccccccccccccccccchhhhcc-----CCcccc
Confidence 9999999988887754 3579999999986431 1223445677889999999998887643 234566
Q ss_pred EEcCCCCCC-----------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 164 NMDGAGSGG-----------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 164 ~vsS~~~~~-----------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
++++..... ........|+.+|.+.+.+++.+...+ |+.+.++.|+.+-.+..
T Consensus 141 ~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~ 210 (383)
T d1gy8a_ 141 FSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE 210 (383)
T ss_dssp EEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred cccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCc
Confidence 655431111 011224679999999999999888774 78999999988876543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=4.8e-13 Score=121.42 Aligned_cols=163 Identities=19% Similarity=0.176 Sum_probs=111.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|+||||||+|-||++++++|+++|++|++++|....-.+. +.... ...++.....|+.+.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~---~~~~~---------------~~~~~d~~~~~~~~~-- 61 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWI---------------GHENFELINHDVVEP-- 61 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGGT---------------TCTTEEEEECCTTSC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH---HHHhc---------------CCCceEEEehHHHHH--
Confidence 7899999999999999999999999999998633211000 00000 112344455555322
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 172 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~ 172 (347)
.+.++|+|||.|+.... +... ++..+.+++|+.|+..+++++... +.++|++||...-.
T Consensus 62 ----------~~~~~d~VihlAa~~~~--~~~~---~~~~~~~~~Nv~g~~~ll~~~~~~------~~k~I~~SS~~vy~ 120 (312)
T d2b69a1 62 ----------LYIEVDQIYHLASPASP--PNYM---YNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEVYG 120 (312)
T ss_dssp ----------CCCCCSEEEECCSCCSH--HHHT---TCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGGB
T ss_pred ----------HHcCCCEEEECcccCCc--hhHH---hCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEEEChheec
Confidence 12369999999986431 1111 234577899999999999877543 23688888752110
Q ss_pred ---------------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCccc
Q 019009 173 ---------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 219 (347)
Q Consensus 173 ---------------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~ 219 (347)
.+......|+.||.+.+.+++..++++ |+.+..+.|+.|-.|..
T Consensus 121 ~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~ 179 (312)
T d2b69a1 121 DPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM 179 (312)
T ss_dssp SCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred CCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCC
Confidence 011134579999999999999999885 78999999999987643
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.29 E-value=6.2e-12 Score=114.19 Aligned_cols=204 Identities=10% Similarity=0.067 Sum_probs=132.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEE------EeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVV------ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil------~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+||||||||-||..+++.|+++|++|.. .++....... ..+.. .....++.++..|.
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~---------------~~~~~~~~~~~~d~ 64 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAP---------------VDADPRLRFVHGDI 64 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGG---------------GTTCTTEEEEECCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhh---------------hhcCCCeEEEEecc
Confidence 4899999999999999999999975543 3321110000 00000 00234688999999
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
++........ ...|.++|.|+.... ....+..+..+++|+.++..+.+++... +..++|+.||
T Consensus 65 ~~~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~-----~~~~~I~~Ss 127 (322)
T d1r6da_ 65 RDAGLLAREL-------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVST 127 (322)
T ss_dssp TCHHHHHHHT-------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEE
T ss_pred ccchhhhccc-------cccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHHc-----CCceEEEeec
Confidence 9988766543 378999999986431 2233455677899999999999888643 3457999987
Q ss_pred CCCCC----------CCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcc--c------chhh
Q 019009 168 AGSGG----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST--I------QNKQ 229 (347)
Q Consensus 168 ~~~~~----------~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~--~------~~~~ 229 (347)
...-. .+......|+.+|.+.+.+++.+++++ |+.+..+.|+.+-.|....... . ..+.
T Consensus 128 ~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~ 204 (322)
T d1r6da_ 128 NQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGT 204 (322)
T ss_dssp GGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCC
T ss_pred ceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCC
Confidence 62110 011223579999999999999999875 7899999999987764221100 0 0000
Q ss_pred h--hhh-----ccCCHHHHHHHHhhhhhhccc
Q 019009 230 M--FNI-----ICELPETVARTLVPRIRVVKG 254 (347)
Q Consensus 230 ~--~~~-----~~~~pe~~a~~~~~~~~~~~~ 254 (347)
+ ... -....+++|+.++..+..+..
T Consensus 205 i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~ 236 (322)
T d1r6da_ 205 LPLYGDGANVREWVHTDDHCRGIALVLAGGRA 236 (322)
T ss_dssp EEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT
T ss_pred cEEecCCCeEEccEEHHHHHHHHHHHHhCCCC
Confidence 0 000 012468999999888876543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.25 E-value=7.8e-11 Score=105.24 Aligned_cols=204 Identities=12% Similarity=0.017 Sum_probs=116.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH-HHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM-TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++||||||||.||+.++++|+++|++|+++.|+...... ..+.+... ....+.++.+|++|.+
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~----------------~~~~v~~v~~d~~d~~ 67 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF----------------KQLGAKLIEASLDDHQ 67 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH----------------HTTTCEEECCCSSCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh----------------ccCCcEEEEeecccch
Confidence 569999999999999999999999999999997543211 11112111 2245788999999998
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
++.+.+. +.+.++++++.... ..|..+...++.++. +. ...+++..||.+..
T Consensus 68 ~~~~~~~-------~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a~----~~-~~~~~v~~Ss~g~~ 119 (312)
T d1qyda_ 68 RLVDALK-------QVDVVISALAGGVL----------------SHHILEQLKLVEAIK----EA-GNIKRFLPSEFGMD 119 (312)
T ss_dssp HHHHHHT-------TCSEEEECCCCSSS----------------STTTTTHHHHHHHHH----HS-CCCSEEECSCCSSC
T ss_pred hhhhhcc-------Ccchhhhhhhhccc----------------ccchhhhhHHHHHHH----Hh-cCCcEEEEeecccc
Confidence 8877654 67899998875321 112333333333332 22 24456666665332
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc------chhh-------hhhhccCCH
Q 019009 172 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI------QNKQ-------MFNIICELP 238 (347)
Q Consensus 172 ~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~------~~~~-------~~~~~~~~p 238 (347)
.........|..++.......+....+ .++.+..+.||.+..+........ .... -........
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 196 (312)
T d1qyda_ 120 PDIMEHALQPGSITFIDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDE 196 (312)
T ss_dssp TTSCCCCCSSTTHHHHHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECH
T ss_pred CCCcccccchhhhhhHHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeH
Confidence 222111122333333333333333333 467778888888754322111000 0000 011122467
Q ss_pred HHHHHHHhhhhhhccccccceeecc
Q 019009 239 ETVARTLVPRIRVVKGSGKAINYLT 263 (347)
Q Consensus 239 e~~a~~~~~~~~~~~~~~~~~~~l~ 263 (347)
+++|+.++..+..++..++.+..+.
T Consensus 197 ~Dva~a~~~~l~~~~~~~~~~~~~~ 221 (312)
T d1qyda_ 197 DDVGTYTIKSIDDPQTLNKTMYIRP 221 (312)
T ss_dssp HHHHHHHHHHTTCGGGSSSEEECCC
T ss_pred HHHHHHHHHHhcCccccCceEEEeC
Confidence 9999999988887776665544343
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.13 E-value=9.5e-11 Score=99.73 Aligned_cols=182 Identities=16% Similarity=0.091 Sum_probs=112.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
|+||||||||.||++++++|+++|+ +|+...|++.. ...+ +..+..|.
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------------------------~~~~---~~~~~~d~ 52 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------------------------EHPR---LDNPVGPL 52 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------------------------CCTT---EECCBSCH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------------------------hccc---ccccccch
Confidence 8999999999999999999999997 67766765421 1112 34455554
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS 170 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~ 170 (347)
.++.. ...+.+|.+|+++|.... . . ..-+...++|+.++..+++++.. . +-.+++++||.++
T Consensus 53 ~~~~~------~~~~~~d~vi~~~g~~~~-~---~---~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~~i~~Ss~~~ 114 (212)
T d2a35a1 53 AELLP------QLDGSIDTAFCCLGTTIK-E---A---GSEEAFRAVDFDLPLAVGKRALE----M-GARHYLVVSALGA 114 (212)
T ss_dssp HHHGG------GCCSCCSEEEECCCCCHH-H---H---SSHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTTC
T ss_pred hhhhh------ccccchheeeeeeeeecc-c---c---ccccccccchhhhhhhccccccc----c-ccccccccccccc
Confidence 43322 223568999999986421 1 1 12256778899999888887643 2 3568999987633
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCe-EEEEeeCCcccCcccccCcccc-hhhh-----hhhccCCHHHHHH
Q 019009 171 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLLLSGSTIQ-NKQM-----FNIICELPETVAR 243 (347)
Q Consensus 171 ~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI-~v~~i~PG~v~T~~~~~~~~~~-~~~~-----~~~~~~~pe~~a~ 243 (347)
. ......|..+|...+.+.+ ..+. ++..+.|+.|..+......... ...+ ....+...+++|+
T Consensus 115 ~---~~~~~~y~~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ 184 (212)
T d2a35a1 115 D---AKSSIFYNRVKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLAR 184 (212)
T ss_dssp C---TTCSSHHHHHHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHH
T ss_pred c---cccccchhHHHHHHhhhcc-------ccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHH
Confidence 2 2234679999988776543 2233 5778899998765422110000 0000 0011134678888
Q ss_pred HHhhhhhhc
Q 019009 244 TLVPRIRVV 252 (347)
Q Consensus 244 ~~~~~~~~~ 252 (347)
.++..+..+
T Consensus 185 ai~~~~~~~ 193 (212)
T d2a35a1 185 ALWRLALEE 193 (212)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHcCC
Confidence 887766543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.11 E-value=3.9e-10 Score=99.43 Aligned_cols=178 Identities=15% Similarity=0.065 Sum_probs=114.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
||||||||.||.+++++|.++|++|+.++|+ .+|++|.++++
T Consensus 4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~--------------------------------------~~D~~d~~~~~ 45 (281)
T d1vl0a_ 4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------------------DLDITNVLAVN 45 (281)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------------------TCCTTCHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEEeech--------------------------------------hccCCCHHHHH
Confidence 8999999999999999999999999999873 24899999999
Q ss_pred HHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC---
Q 019009 95 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG--- 171 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~--- 171 (347)
++++.. ++|++||+|+.... +......+..+..|+.....+....... ...++..||....
T Consensus 46 ~~l~~~-----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~ 109 (281)
T d1vl0a_ 46 KFFNEK-----KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGE 109 (281)
T ss_dssp HHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSC
T ss_pred HHHHHc-----CCCEEEeecccccc-----ccccccchhhcccccccccccccccccc------cccccccccceeeecc
Confidence 887754 68999999986431 1223344566778887777776665543 2345555543111
Q ss_pred -------CCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCcccchhhhhh----------hc
Q 019009 172 -------GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN----------II 234 (347)
Q Consensus 172 -------~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~----------~~ 234 (347)
.........|+.+|...+.+.+. .+.++..+.|+.+..+-.............. ..
T Consensus 110 ~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (281)
T d1vl0a_ 110 AKEPITEFDEVNPQSAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGT 182 (281)
T ss_dssp CSSCBCTTSCCCCCSHHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEEC
T ss_pred ccccccccccccchhhhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccccchhhhhccCCceeecCCceec
Confidence 11223446789999887766542 2456777899988655311100000000000 01
Q ss_pred cCCHHHHHHHHhhhhhhcc
Q 019009 235 CELPETVARTLVPRIRVVK 253 (347)
Q Consensus 235 ~~~pe~~a~~~~~~~~~~~ 253 (347)
....+++++.+...+....
T Consensus 183 ~i~v~D~~~~~~~~~~~~~ 201 (281)
T d1vl0a_ 183 PTSTVDLARVVLKVIDEKN 201 (281)
T ss_dssp CEEHHHHHHHHHHHHHHTC
T ss_pred cchhhhhhhhhhhhhhhcc
Confidence 1257888888887776653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.09 E-value=1.7e-09 Score=95.59 Aligned_cols=196 Identities=11% Similarity=0.077 Sum_probs=114.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH--HHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR--MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.|+||||||||.||++++++|+++|++|+++.|+..... +....+... ....+..+.+|+.+
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~d~~~ 66 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF----------------KASGANIVHGSIDD 66 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH----------------HTTTCEEECCCTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh----------------ccCCcEEEEeeccc
Confidence 378999999999999999999999999999999765421 111222221 12357788999999
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.+...+.++ ..|.+|++++... ..+...+.+++... ....+++.||.+
T Consensus 67 ~~~~~~~~~-------~~~~vi~~~~~~~--------------------~~~~~~~~~a~~~~-----~~~~~~~~s~~~ 114 (307)
T d1qyca_ 67 HASLVEAVK-------NVDVVISTVGSLQ--------------------IESQVNIIKAIKEV-----GTVKRFFPSEFG 114 (307)
T ss_dssp HHHHHHHHH-------TCSEEEECCCGGG--------------------SGGGHHHHHHHHHH-----CCCSEEECSCCS
T ss_pred chhhhhhhh-------hceeeeecccccc--------------------cchhhHHHHHHHHh-----ccccceeeeccc
Confidence 988777664 5789999887532 11222233333322 234566666653
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcccccCccc-----chh-------hhhhhccCC
Q 019009 170 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNK-------QMFNIICEL 237 (347)
Q Consensus 170 ~~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~~~~~~~~-----~~~-------~~~~~~~~~ 237 (347)
..........+...+.......+....+ .|+.+..+.|+.+..+........ ... .........
T Consensus 115 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (307)
T d1qyca_ 115 -NDVDNVHAVEPAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVK 190 (307)
T ss_dssp -SCTTSCCCCTTHHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEEC
T ss_pred -cccccccccccccccccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCc
Confidence 2222222223333333333333333333 367778889988865432211100 000 001111236
Q ss_pred HHHHHHHHhhhhhhccccccce
Q 019009 238 PETVARTLVPRIRVVKGSGKAI 259 (347)
Q Consensus 238 pe~~a~~~~~~~~~~~~~~~~~ 259 (347)
.+++|+.++..+..++..++.+
T Consensus 191 v~Dva~~~~~~l~~~~~~~~~~ 212 (307)
T d1qyca_ 191 EEDIGTFTIKAVDDPRTLNKTL 212 (307)
T ss_dssp HHHHHHHHHTTSSCGGGTTEEE
T ss_pred HHHHHHHHHHHhcChhhcCcee
Confidence 8899999998887776555443
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.04 E-value=7.9e-15 Score=123.47 Aligned_cols=46 Identities=28% Similarity=0.288 Sum_probs=41.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL 60 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~ 60 (347)
+.|+||+|+||+++|+.|+++|++|++.+|++++++++.+++.+..
T Consensus 3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~ 48 (212)
T d1jaya_ 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA 48 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 5677888999999999999999999999999999999999987643
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.03 E-value=2.7e-10 Score=101.08 Aligned_cols=129 Identities=18% Similarity=0.129 Sum_probs=89.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
+||||||+|-||.+++++|.++|..|+ ++++.. .+..|++|.+.+
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~----------------------------------~~~~Dl~~~~~~ 46 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSK----------------------------------EFCGDFSNPKGV 46 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCS----------------------------------SSCCCTTCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCc----------------------------------cccCcCCCHHHH
Confidence 489999999999999999999986544 444321 024699999999
Q ss_pred HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCC-
Q 019009 94 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG- 172 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~- 172 (347)
+++++.. ++|+|||+||...+ . ... +.-+..+++|+.+...+..++.. .+.+++++||.....
T Consensus 47 ~~~i~~~-----~~D~Vih~Aa~~~~-~-~~~---~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~~ss~~~~~~ 110 (298)
T d1n2sa_ 47 AETVRKL-----RPDVIVNAAAHTAV-D-KAE---SEPELAQLLNATSVEAIAKAANE------TGAWVVHYSTDYVFPG 110 (298)
T ss_dssp HHHHHHH-----CCSEEEECCCCCCH-H-HHT---TCHHHHHHHHTHHHHHHHHHHTT------TTCEEEEEEEGGGSCC
T ss_pred HHHHHHc-----CCCEEEEecccccc-c-ccc---cCccccccccccccccchhhhhc------cccccccccccccccC
Confidence 9888765 68999999997541 1 111 22356778899998888887632 245677777652211
Q ss_pred ---------CCCCCcchhhhHHHHHHHHHH
Q 019009 173 ---------SSTPLTAVYGSTKCGLRQLQA 193 (347)
Q Consensus 173 ---------~~~~~~~~Y~asKaal~~~~~ 193 (347)
........|+.+|.+.+.+.+
T Consensus 111 ~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~ 140 (298)
T d1n2sa_ 111 TGDIPWQETDATSPLNVYGKTKLAGEKALQ 140 (298)
T ss_dssp CTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred CCCCCCccccccCCCchHhhhhhhhhhhHH
Confidence 111123579999988876654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.88 E-value=5.5e-08 Score=88.47 Aligned_cols=152 Identities=12% Similarity=0.006 Sum_probs=95.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
..|+|+||||||.||.+++++|+++|++|+++.|++.+... .++. ....+..+.+|+.|.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~------------------~~~~v~~~~gD~~d~ 61 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ------------------AIPNVTLFQGPLLNN 61 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH------------------TSTTEEEEESCCTTC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc------------------ccCCCEEEEeeCCCc
Confidence 35999999999999999999999999999999998776432 2221 123578899999996
Q ss_pred HHH-HHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCC
Q 019009 91 ADV-QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 169 (347)
Q Consensus 91 ~~v-~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~ 169 (347)
.++ +.+ +..+|.++.+..... .. |+....+++.++.. . +..+++..||..
T Consensus 62 ~~~~~~a-------~~~~~~~~~~~~~~~------~~-----------~~~~~~~~~~aa~~----a-gv~~~v~~Ss~~ 112 (350)
T d1xgka_ 62 VPLMDTL-------FEGAHLAFINTTSQA------GD-----------EIAIGKDLADAAKR----A-GTIQHYIYSSMP 112 (350)
T ss_dssp HHHHHHH-------HTTCSEEEECCCSTT------SC-----------HHHHHHHHHHHHHH----H-SCCSEEEEEECC
T ss_pred HHHHHHH-------hcCCceEEeeccccc------ch-----------hhhhhhHHHHHHHH----h-CCCceEEEeecc
Confidence 653 322 246788877653221 11 12222333444322 2 233566666652
Q ss_pred C-CCCCCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 170 S-GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 170 ~-~~~~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
. ...+......|..+|...+.+.+ ..++....+.||.+..++
T Consensus 113 ~~~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~vr~~~~~~~~ 155 (350)
T d1xgka_ 113 DHSLYGPWPAVPMWAPKFTVENYVR-------QLGLPSTFVYAGIYNNNF 155 (350)
T ss_dssp CGGGTSSCCCCTTTHHHHHHHHHHH-------TSSSCEEEEEECEEGGGC
T ss_pred ccccCCcccchhhhhhHHHHHHHHH-------hhccCceeeeeceeeccc
Confidence 2 22223334567778877665543 235677788888775543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=2.2e-08 Score=88.59 Aligned_cols=161 Identities=13% Similarity=0.111 Sum_probs=97.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
||||||+|-||..++++|+++|+ .|+++++-.... +.. .+.+ ...+|..+.+.
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~-~~~~-----------------------~~~~~~~~~~~- 55 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFV-NLVD-----------------------LNIADYMDKED- 55 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGH-HHHT-----------------------SCCSEEEEHHH-
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhh-cccc-----------------------cchhhhccchH-
Confidence 79999999999999999999996 577765322110 000 0100 01223333333
Q ss_pred HHHHHHHH--hhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCC
Q 019009 94 QKLSNFAV--NEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 171 (347)
Q Consensus 94 ~~~~~~i~--~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~ 171 (347)
..+... ..+..+++++|.|+... ....+ .+...+.|+.+...+..++...- -..|+..|+....
T Consensus 56 --~~~~~~~~~~~~~~~~i~~~aa~~~----~~~~~---~~~~~~~~~~~~~~~l~~~~~~~-----i~~v~~ss~~~~~ 121 (307)
T d1eq2a_ 56 --FLIQIMAGEEFGDVEAIFHEGACSS----TTEWD---GKYMMDNNYQYSKELLHYCLERE-----IPFLYASSAATYG 121 (307)
T ss_dssp --HHHHHHTTCCCSSCCEEEECCSCCC----TTCCC---HHHHHHHTHHHHHHHHHHHHHHT-----CCEEEEEEGGGGT
T ss_pred --HHHHHhhhhcccchhhhhhhccccc----ccccc---ccccccccccccccccccccccc-----ccccccccccccc
Confidence 333333 23457889999987533 11222 34566777888877777665442 2344444443211
Q ss_pred CC---------CCCCcchhhhHHHHHHHHHHHHHhHhcCCCeEEEEeeCCcccCcc
Q 019009 172 GS---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 218 (347)
Q Consensus 172 ~~---------~~~~~~~Y~asKaal~~~~~~La~el~~~gI~v~~i~PG~v~T~~ 218 (347)
.. ..+....|+.+|.+.+.+.+.+..+ .++.+..+.|..+-.|.
T Consensus 122 ~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~ 174 (307)
T d1eq2a_ 122 GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPR 174 (307)
T ss_dssp TCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSS
T ss_pred cccccccccccccccccccccccchhhhhccccccc---cccccccccceeEeecc
Confidence 11 1123467999999999999888776 46788888888776653
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.09 E-value=7.9e-06 Score=66.91 Aligned_cols=82 Identities=16% Similarity=0.149 Sum_probs=56.8
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+..+|.+|||+||++|+|.+.++.....|++|+.++|++++.+.. ++ .+.... .|-
T Consensus 26 ~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~----~~-----------------~Ga~~v---i~~ 81 (182)
T d1v3va2 26 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQ-----------------IGFDAA---FNY 81 (182)
T ss_dssp CCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HH-----------------TTCSEE---EET
T ss_pred CCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH----Hh-----------------hhhhhh---ccc
Confidence 346789999999999999999999999999999999998775432 22 222222 233
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
.+.+..+.+.+... ..++|+++++.|
T Consensus 82 ~~~~~~~~~~~~~~--~~Gvd~v~D~vG 107 (182)
T d1v3va2 82 KTVNSLEEALKKAS--PDGYDCYFDNVG 107 (182)
T ss_dssp TSCSCHHHHHHHHC--TTCEEEEEESSC
T ss_pred ccccHHHHHHHHhh--cCCCceeEEecC
Confidence 44333333333221 236999999987
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=1e-05 Score=65.65 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=56.7
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+...|.+|||+||++++|...++.+...|++|+++++++++.+.+. + .+..- ..|.
T Consensus 25 ~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~-----------------~Ga~~---vi~~ 80 (174)
T d1yb5a2 25 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----Q-----------------NGAHE---VFNH 80 (174)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----H-----------------TTCSE---EEET
T ss_pred CCCCCCEEEEEeccccccccccccccccCccccccccccccccccc----c-----------------cCccc---cccc
Confidence 3457899999999999999999998899999999999887654332 2 22221 2366
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
++.+-.+++.+.... .++|+++.+.|
T Consensus 81 ~~~~~~~~i~~~t~~--~g~d~v~d~~g 106 (174)
T d1yb5a2 81 REVNYIDKIKKYVGE--KGIDIIIEMLA 106 (174)
T ss_dssp TSTTHHHHHHHHHCT--TCEEEEEESCH
T ss_pred ccccHHHHhhhhhcc--CCceEEeeccc
Confidence 665444443332211 25999999876
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.99 E-value=1.2e-05 Score=65.57 Aligned_cols=43 Identities=12% Similarity=0.045 Sum_probs=37.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
..|.+|||+||+||+|.+..+.....|++|+.+++++++.+.+
T Consensus 30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~ 72 (176)
T d1xa0a2 30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL 72 (176)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH
Confidence 4478999999999999999998889999999999998886543
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.93 E-value=5.2e-05 Score=61.90 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+|+|+|.|+ ||.|++++..|++.|. +++++.|++++++++....++... .........|+.+
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~~~ 80 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE---------------NTDCVVTVTDLAD 80 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH---------------HSSCEEEEEETTC
T ss_pred CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh---------------hcCcceEeeeccc
Confidence 4699999998 6999999999999997 799999998877665543332211 1223345678888
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
.+++..... ..|++||+....
T Consensus 81 ~~~~~~~~~-------~~diiIN~Tp~G 101 (182)
T d1vi2a1 81 QQAFAEALA-------SADILTNGTKVG 101 (182)
T ss_dssp HHHHHHHHH-------TCSEEEECSSTT
T ss_pred ccchhhhhc-------ccceeccccCCc
Confidence 887766543 679999998654
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.88 E-value=2.5e-05 Score=62.95 Aligned_cols=74 Identities=22% Similarity=0.136 Sum_probs=54.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|+|+|.|| |.+|+.+|+.|+++|++|++++|+.+++++..+++ ........+..+..
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~---------------------~~~~~~~~~~~~~~ 59 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------------------QHSTPISLDVNDDA 59 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC---------------------TTEEEEECCTTCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc---------------------cccccccccccchh
Confidence 589999987 89999999999999999999999999887665432 22334455666655
Q ss_pred HHHHHHHHHHhhcCCccEEEEcC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nA 114 (347)
.....+. ..|.++...
T Consensus 60 ~~~~~i~-------~~~~~i~~~ 75 (182)
T d1e5qa1 60 ALDAEVA-------KHDLVISLI 75 (182)
T ss_dssp HHHHHHT-------TSSEEEECS
T ss_pred hhHhhhh-------ccceeEeec
Confidence 5555442 457776544
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.88 E-value=1.5e-05 Score=65.62 Aligned_cols=90 Identities=18% Similarity=0.120 Sum_probs=58.8
Q ss_pred cccCCCeEEE-EcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 8 HWSCTCRWFS-VVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 8 ~~~~~k~vlI-TGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
+...|.+++| +||++|+|.+.++.....|++||.+.|+.++.++..+.+++. +... .+..|
T Consensus 25 ~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l-----------------Gad~-vi~~~ 86 (189)
T d1gu7a2 25 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-----------------GATQ-VITED 86 (189)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-----------------TCSE-EEEHH
T ss_pred CCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc-----------------cccE-EEecc
Confidence 3456766666 699999999999888889999999999888777777666653 2222 12222
Q ss_pred CCCHHHHHHHHHHHHh-hcCCccEEEEcCC
Q 019009 87 VCEPADVQKLSNFAVN-EFGSIDIWINNAG 115 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~-~~g~iD~li~nAG 115 (347)
-.+..+..+.+.++.+ ..+++|+++++.|
T Consensus 87 ~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg 116 (189)
T d1gu7a2 87 QNNSREFGPTIKEWIKQSGGEAKLALNCVG 116 (189)
T ss_dssp HHHCGGGHHHHHHHHHHHTCCEEEEEESSC
T ss_pred ccchhHHHHHHHHHHhhccCCceEEEECCC
Confidence 1112233333344433 3457999999886
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.87 E-value=0.00014 Score=57.15 Aligned_cols=118 Identities=16% Similarity=0.170 Sum_probs=73.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
|...+++.|.|+ |.+|..+|..|+.+| .+|+++++++++.+....++...... . ........|
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~-------------~-~~~~~~~~d 66 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAF-------------T-APKKIYSGE 66 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGG-------------S-CCCEEEECC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccc-------------c-CCceEeecc
Confidence 344567888896 899999999999988 58999999999887777777653211 1 122333334
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
. + .....|++|..||... .+ . +.-...+..|. .+.+...+.+.+....+.++++|
T Consensus 67 ~---~-----------~~~~adivvitag~~~--~~--g---~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 67 Y---S-----------DCKDADLVVITAGAPQ--KP--G---ESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp G---G-----------GGTTCSEEEECCCC-----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred H---H-----------HhccccEEEEeccccc--CC--C---CCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence 2 2 1236799999999754 11 1 12233444453 45666777777665566666664
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.86 E-value=5.2e-05 Score=60.55 Aligned_cols=45 Identities=24% Similarity=0.279 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l 56 (347)
.+|+++|.|+ |++|..+++.|..+|+ +|.++.|+.++.++..+++
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~ 68 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL 68 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence 4699999998 9999999999999998 6999999999887766654
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=1.3e-05 Score=65.12 Aligned_cols=82 Identities=10% Similarity=0.091 Sum_probs=58.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+.|++|+|+||++|+|...++.....|++|+.+.+++++.+.+. ++ +.. ...|.+
T Consensus 26 l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l--------------------Ga~---~vi~~~ 81 (179)
T d1qora2 26 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA--------------------GAW---QVINYR 81 (179)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEETT
T ss_pred CCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc--------------------CCe---EEEECC
Confidence 456899999999999999999999999999999999998875432 22 222 123666
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+++-.+++.+ +. .-.++|+++.+.|.
T Consensus 82 ~~d~~~~v~~-~t-~g~g~d~v~d~~g~ 107 (179)
T d1qora2 82 EEDLVERLKE-IT-GGKKVRVVYDSVGR 107 (179)
T ss_dssp TSCHHHHHHH-HT-TTCCEEEEEECSCG
T ss_pred CCCHHHHHHH-Hh-CCCCeEEEEeCccH
Confidence 6544444322 22 12368999998863
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.81 E-value=2.2e-05 Score=63.95 Aligned_cols=43 Identities=21% Similarity=0.159 Sum_probs=37.9
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
+...|.+|||+||++++|...++.+...|++|+++++++++.+
T Consensus 22 ~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~ 64 (183)
T d1pqwa_ 22 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE 64 (183)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred CCCCCCEEEEECCCCCcccccchhhccccccceeeeccccccc
Confidence 4566899999999999999999988889999999999887654
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.75 E-value=7e-05 Score=60.97 Aligned_cols=44 Identities=14% Similarity=-0.031 Sum_probs=37.6
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
....|.+|+|+|+ ++||...++.+...|+ +|+++++++++++.+
T Consensus 25 ~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a 69 (182)
T d1vj0a2 25 ESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA 69 (182)
T ss_dssp SCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEECC-Cccchhheeccccccccccccccccccccccc
Confidence 3456899999997 7999999999999998 799999999987543
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.75 E-value=9.4e-05 Score=59.34 Aligned_cols=83 Identities=14% Similarity=0.160 Sum_probs=56.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..|.+++|+| +++||...++.+...|++|+++++++++++.+.+ .+.... +..|-.+
T Consensus 25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~---------------------~ga~~~-~~~~~~~ 81 (170)
T d1e3ja2 25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN---------------------CGADVT-LVVDPAK 81 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---------------------TTCSEE-EECCTTT
T ss_pred CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH---------------------cCCcEE-Eeccccc
Confidence 4578999997 6799999999998999999999999998754432 122222 2223222
Q ss_pred HHHHHHHHHHHHhhcC-CccEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFG-SIDIWINNAGT 116 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g-~iD~li~nAG~ 116 (347)
++.....+.+.+..| .+|++|.++|.
T Consensus 82 -~~~~~~~~~~~~~~g~g~D~vid~~g~ 108 (170)
T d1e3ja2 82 -EEESSIIERIRSAIGDLPNVTIDCSGN 108 (170)
T ss_dssp -SCHHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred -cccchhhhhhhcccccCCceeeecCCC
Confidence 233444445554443 68999999975
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.72 E-value=0.00029 Score=55.18 Aligned_cols=119 Identities=13% Similarity=0.113 Sum_probs=74.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
|.+.|+|+ |.+|..+|..|+.+| .++++.++++++++....++...... ..........| .
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~-------------~~~~~~~~~~d---~ 64 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMAN-------------LEAHGNIVIND---W 64 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG-------------SSSCCEEEESC---G
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccc-------------cCCccceeccC---H
Confidence 67788895 899999999999988 48999999999988777777764321 11222222223 2
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+++ -.-|++|..||.... ..+.+-+.-...++.| ..+++.+.+.+.+....+.++++|
T Consensus 65 ~~l-----------~~adiVVitaG~~~~---~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvt 122 (146)
T d1hyha1 65 AAL-----------ADADVVISTLGNIKL---QQDNPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVIS 122 (146)
T ss_dssp GGG-----------TTCSEEEECCSCGGG---TC-------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred HHh-----------ccccEEEEecccccc---ccccCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEec
Confidence 221 257999999997431 1111111112234444 356678888887775667777775
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=4.1e-05 Score=53.20 Aligned_cols=42 Identities=14% Similarity=0.102 Sum_probs=37.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
.++.++||+||++|+|....+.+...|++|+.+.+++++.+-
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~ 71 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY 71 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence 356899999999999999999888999999999999887654
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.61 E-value=7.1e-05 Score=60.42 Aligned_cols=44 Identities=18% Similarity=0.149 Sum_probs=38.7
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
....|++|+|+||++++|...++.+...|++|+.+++++++.+.
T Consensus 24 ~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~ 67 (171)
T d1iz0a2 24 QARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 67 (171)
T ss_dssp TCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH
T ss_pred CCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccc
Confidence 34678999999999999999999888999999999998887654
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.58 E-value=0.00086 Score=52.49 Aligned_cols=117 Identities=15% Similarity=0.109 Sum_probs=74.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.++.+.|+|| |.+|..+|..|+.+|. +|++.++++++++....++.....- ....+.....|.
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~~~~~d~- 69 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVF-------------APKPVDIWHGDY- 69 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTS-------------SSSCCEEEECCG-
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccc-------------cCCCeEEEECCH-
Confidence 3577888997 8999999999999883 7999999999988777777653210 112233333332
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ ....-|++|..+|... .+- +.. ...+..| ..+.+.+.+.+.+....+.++++|
T Consensus 70 --~-----------~l~daDvvvitag~~~--~~~-~~R----~dl~~~N----~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 70 --D-----------DCRDADLVVICAGANQ--KPG-ETR----LDLVDKN----IAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp --G-----------GTTTCSEEEECCSCCC--CTT-TCS----GGGHHHH----HHHHHHHHHHHHHHTCCSEEEECS
T ss_pred --H-----------HhccceeEEEeccccc--ccC-cch----hHHHHHH----HHHHHHHHHHHHhhCCCceEEEec
Confidence 1 1235799999999754 211 111 1222333 345566666666554567777775
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.53 E-value=0.00022 Score=57.39 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+|+++|.|+ ||.+++++..|.+.+.+|+++.|+.+++++..+.+... ..+..+..|-.
T Consensus 17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~------------------~~~~~~~~~~~-- 75 (171)
T d1p77a1 17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY------------------GNIQAVSMDSI-- 75 (171)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG------------------SCEEEEEGGGC--
T ss_pred CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc------------------cccchhhhccc--
Confidence 5789999986 68999999999998889999999999988887776431 23444444421
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
.....|++||+.....
T Consensus 76 ------------~~~~~diiIN~tp~g~ 91 (171)
T d1p77a1 76 ------------PLQTYDLVINATSAGL 91 (171)
T ss_dssp ------------CCSCCSEEEECCCC--
T ss_pred ------------cccccceeeecccccc
Confidence 1246899999987643
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=0.00015 Score=58.29 Aligned_cols=46 Identities=11% Similarity=0.088 Sum_probs=40.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE 57 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~ 57 (347)
.||+|+|.|+ ||-+++++..|.+.|.+|+++.|+.++.++..+.+.
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~ 62 (170)
T d1nyta1 17 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA 62 (170)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG
T ss_pred CCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHh
Confidence 4799999997 799999999999999999999999999887776654
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.49 E-value=0.0018 Score=51.25 Aligned_cols=121 Identities=12% Similarity=0.027 Sum_probs=78.9
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEe
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA 84 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (347)
+.+...+.+.|.|+ |.+|..+|..|+.+|. +++++++++++.+..+.++...... .........
T Consensus 15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~-------------~~~~~~~~~ 80 (160)
T d1i0za1 15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLF-------------LQTPKIVAD 80 (160)
T ss_dssp CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------CCCSEEEEC
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccc-------------cCCCeEEec
Confidence 44555678889996 8999999999999994 8999999999888777788653210 111222222
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEE
Q 019009 85 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 164 (347)
Q Consensus 85 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~ 164 (347)
.|. ++ ...-|++|..||... .+ ..+. ...++.| ..+.+.+.|.+.+....+.+++
T Consensus 81 ~d~---~~-----------~~~adiVVitAg~~~--~~--g~tR---~~l~~~N----~~i~~~i~~~i~~~~p~aiiiv 135 (160)
T d1i0za1 81 KDY---SV-----------TANSKIVVVTAGVRQ--QE--GESR---LNLVQRN----VNVFKFIIPQIVKYSPDCIIIV 135 (160)
T ss_dssp SSG---GG-----------GTTCSEEEECCSCCC--CT--TCCG---GGGHHHH----HHHHHHHHHHHHHHCTTCEEEE
T ss_pred cch---hh-----------cccccEEEEecCCcc--cc--Ccch---HHHHHHH----HHHHHHHHHHHHhcCCCcEEEE
Confidence 232 22 235799999999754 22 1222 2233334 3466777777777655677777
Q ss_pred Ec
Q 019009 165 MD 166 (347)
Q Consensus 165 vs 166 (347)
+|
T Consensus 136 vt 137 (160)
T d1i0za1 136 VS 137 (160)
T ss_dssp CS
T ss_pred eC
Confidence 75
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.48 E-value=0.00058 Score=54.63 Aligned_cols=81 Identities=15% Similarity=0.180 Sum_probs=56.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..|.+|+|.|+ +++|...+..+...|+ +|+++++++++++.+. ++ +.. ..+..+-.
T Consensus 25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~--------------------Ga~-~~~~~~~~ 81 (171)
T d1pl8a2 25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI--------------------GAD-LVLQISKE 81 (171)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT--------------------TCS-EEEECSSC
T ss_pred CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh--------------------CCc-cccccccc
Confidence 56789999987 8999999999999998 7999999999876432 22 222 22333334
Q ss_pred CHHHHHHHHHHHHhhcC-CccEEEEcCCC
Q 019009 89 EPADVQKLSNFAVNEFG-SIDIWINNAGT 116 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g-~iD~li~nAG~ 116 (347)
+..+..+.++ ..+| ++|++|.+.|.
T Consensus 82 ~~~~~~~~~~---~~~g~g~Dvvid~~G~ 107 (171)
T d1pl8a2 82 SPQEIARKVE---GQLGCKPEVTIECTGA 107 (171)
T ss_dssp CHHHHHHHHH---HHHTSCCSEEEECSCC
T ss_pred cccccccccc---ccCCCCceEEEeccCC
Confidence 4444444433 3333 69999999985
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.44 E-value=0.00021 Score=54.79 Aligned_cols=71 Identities=14% Similarity=0.189 Sum_probs=55.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
.|+|.|+ |-+|+.+++.|.++|+.|+++++|+++.+++.+++ ...++..|.+|++.+
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~----------------------~~~vi~Gd~~~~~~l 58 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----------------------DALVINGDCTKIKTL 58 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------------------SSEEEESCTTSHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh----------------------hhhhccCcccchhhh
Confidence 5789998 89999999999999999999999998876543321 355788999998877
Q ss_pred HHHHHHHHhhcCCccEEEEc
Q 019009 94 QKLSNFAVNEFGSIDIWINN 113 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~n 113 (347)
+++- ....|.++..
T Consensus 59 ~~~~------i~~a~~vv~~ 72 (132)
T d1lssa_ 59 EDAG------IEDADMYIAV 72 (132)
T ss_dssp HHTT------TTTCSEEEEC
T ss_pred hhcC------hhhhhhhccc
Confidence 6651 1256777764
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.38 E-value=0.00023 Score=56.99 Aligned_cols=81 Identities=15% Similarity=0.113 Sum_probs=55.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..|.+++|.|+++++|..++..+...|. +|+++++++++++.+.+ + +.. ..+ |.+
T Consensus 26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~--------------------Ga~-~~i--~~~ 81 (170)
T d1jvba2 26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A--------------------GAD-YVI--NAS 81 (170)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H--------------------TCS-EEE--ETT
T ss_pred CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c--------------------CCc-eee--ccC
Confidence 4578999999999999999999988885 89999999887654322 1 222 222 344
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+.+..++..+.. .-+.+|++|.++|.
T Consensus 82 ~~~~~~~~~~~~--~~~~~d~vid~~g~ 107 (170)
T d1jvba2 82 MQDPLAEIRRIT--ESKGVDAVIDLNNS 107 (170)
T ss_dssp TSCHHHHHHHHT--TTSCEEEEEESCCC
T ss_pred CcCHHHHHHHHh--hcccchhhhccccc
Confidence 444444443322 11359999999975
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.31 E-value=0.00022 Score=57.61 Aligned_cols=42 Identities=12% Similarity=0.050 Sum_probs=36.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
..|.+|+|.|+ +|||...++.+...|+ +|+++++++++++.+
T Consensus 26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a 68 (174)
T d1jqba2 26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA 68 (174)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH
T ss_pred CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH
Confidence 46789999987 8999999999888997 799999999887544
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.25 E-value=0.0025 Score=50.29 Aligned_cols=115 Identities=15% Similarity=0.143 Sum_probs=72.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
..|.|+|+ |.+|..+|..|+.+|. +++++++++++++....+|...... .+........|..
T Consensus 20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~-------------~~~~~~~~~~d~~-- 83 (159)
T d2ldxa1 20 CKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLF-------------LSTPKIVFGKDYN-- 83 (159)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTT-------------CSCCEEEEESSGG--
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchh-------------cCCCeEEeccchh--
Confidence 34777796 8999999999999984 7999999999888888888763211 1122222223321
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
....-|++|..||... .+ ..+.+ ..++.| ..+.+.+.+.+.+....+.++++|
T Consensus 84 ------------~~~~adivvitag~~~--~~--~~~R~---dll~~N----~~i~~~i~~~i~~~~p~~ivivvt 136 (159)
T d2ldxa1 84 ------------VSANSKLVIITAGARM--VS--GQTRL---DLLQRN----VAIMKAIVPGVIQNSPDCKIIVVT 136 (159)
T ss_dssp ------------GGTTEEEEEECCSCCC--CT--TTCSS---CTTHHH----HHHHHHHTTTHHHHSTTCEEEECS
T ss_pred ------------hhccccEEEEeccccc--CC--CCCHH---HHHHHH----HHHHHHHHHHHhccCCCeEEEEeC
Confidence 1236799999999754 21 11111 112223 344566677766655567777775
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.23 E-value=0.0021 Score=49.96 Aligned_cols=116 Identities=13% Similarity=0.113 Sum_probs=68.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChh--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+.|+||+|.+|..+|..|+.+| .++++++++++ +++....++....... ....++.....+ |
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~-----------~~~~~~~~~~~~--d 68 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGT-----------RSDANIYVESDE--N 68 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTS-----------CCCCEEEEEETT--C
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccccc-----------ccCCccccCCcc--h
Confidence 47899999999999999999999 48999998864 4555566666532210 011222222221 1
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEE
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 165 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~v 165 (347)
. +....-|++|.+||... . ...+. ...++.|.. +++...+.+.+.. ...|+.|
T Consensus 69 ~-----------~~l~~aDvVVitAG~~~--~--~g~sR---~dl~~~Na~----iv~~i~~~i~~~~-~~~iivV 121 (145)
T d1hyea1 69 L-----------RIIDESDVVIITSGVPR--K--EGMSR---MDLAKTNAK----IVGKYAKKIAEIC-DTKIFVI 121 (145)
T ss_dssp G-----------GGGTTCSEEEECCSCCC--C--TTCCH---HHHHHHHHH----HHHHHHHHHHHHC-CCEEEEC
T ss_pred H-----------HHhccceEEEEeccccc--C--CCCCh---hhhhhhhHH----HHHHHHHHHhccC-CCeEEEE
Confidence 1 11235799999999753 2 12333 234555543 4555566655543 3345545
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.22 E-value=0.00069 Score=53.44 Aligned_cols=125 Identities=15% Similarity=0.033 Sum_probs=75.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+.+.+++.|.|+ |.+|..+|..|+.+| +++++.+.++++++....++...... .+....... -
T Consensus 4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~-------------~~~~~~~~~--~ 67 (154)
T d1pzga1 4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSV-------------VDTNVSVRA--E 67 (154)
T ss_dssp CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH-------------TTCCCCEEE--E
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccc-------------cCCeeEEec--c
Confidence 344578889997 899999999999888 58999999999888877777664221 111111111 1
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~-~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++.+ +.+ ..-|++|..+|.....+ +-.+.+. ...+..| ..+++...+.+.+....+.++++|
T Consensus 68 ~~~~---~~~-------~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n----~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 68 YSYE---AAL-------TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFN----SKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp CSHH---HHH-------TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHH----HHHHHHHHHHHHHHCTTCEEEECC
T ss_pred Cchh---hhh-------cCCCeEEEecccccCCCCCCcccch---hhhhhhh----HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 1111 111 25799999999864111 1111221 1223333 344566666666654567777775
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.21 E-value=0.0055 Score=47.16 Aligned_cols=113 Identities=18% Similarity=0.129 Sum_probs=72.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.+.|.|+ |.+|..+|..++.+| .++++.++++++++....++....+- .........| .+
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~--------------~~~~~~~~~~---~~ 63 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPF--------------TRRANIYAGD---YA 63 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG--------------SCCCEEEECC---GG
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccc--------------cccccccCCc---HH
Confidence 3556686 899999999999888 48999999999888777777653221 1122223322 22
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++ ..-|++|..||.... ...+. ...+..|. .+.+...+.+.+....+.++++|
T Consensus 64 ~~-----------~~adivvitag~~~~----~g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 64 DL-----------KGSDVVIVAAGVPQK----PGETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp GG-----------TTCSEEEECCCCCCC----SSCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred Hh-----------cCCCEEEEecccccC----CCcch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence 21 257999999997541 12232 22344443 45677777777655567777765
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.18 E-value=0.00075 Score=54.17 Aligned_cols=44 Identities=9% Similarity=0.074 Sum_probs=37.9
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
....|.+|+|.|+ +|+|...+..+...|+ +|+++++++++++.+
T Consensus 25 ~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a 69 (176)
T d2jhfa2 25 KVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA 69 (176)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH
Confidence 4567899999999 6899999999999985 899999999987644
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.15 E-value=0.00045 Score=56.27 Aligned_cols=77 Identities=18% Similarity=0.134 Sum_probs=50.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEE-EEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vi-l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++|||+||+||+|...++-....|++++ .+++++++..+..+++ +.. ...|..+++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~--------------------gad---~vi~~~~~~ 88 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL--------------------GFD---AAVNYKTGN 88 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS--------------------CCS---EEEETTSSC
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc--------------------cce---EEeeccchh
Confidence 7899999999999999998888998654 4566666655444332 222 223555433
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
..+.++++.. .++|+++.+.|
T Consensus 89 -~~~~~~~~~~--~GvDvv~D~vG 109 (187)
T d1vj1a2 89 -VAEQLREACP--GGVDVYFDNVG 109 (187)
T ss_dssp -HHHHHHHHCT--TCEEEEEESSC
T ss_pred -HHHHHHHHhc--cCceEEEecCC
Confidence 3333333332 36999999887
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.13 E-value=0.0069 Score=46.69 Aligned_cols=114 Identities=11% Similarity=0.094 Sum_probs=72.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCC--hhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~--~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.+.|+||+|.+|.++|..++.+|. ++++.+.+ ++.++....++....+ ..........|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~--------------~~~~~~i~~~~--- 64 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--------------YDSNTRVRQGG--- 64 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--------------TTCCCEEEECC---
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccc--------------ccCCceEeeCC---
Confidence 578999999999999999999984 79999864 3445555556654321 11222222333
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
.++ ...-|++|..||... .+ ..+. .+.++.|. .+.+.+.+.+.+....+.++++|
T Consensus 65 ~~~-----------~~~aDiVvitaG~~~--~~--g~~R---~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 65 YED-----------TAGSDVVVITAGIPR--QP--GQTR---IDLAGDNA----PIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp GGG-----------GTTCSEEEECCCCCC--CT--TCCH---HHHHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred HHH-----------hhhcCEEEEeccccc--cc--CCch---hhHHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence 222 136799999999753 22 2232 34555553 56678888888775567777664
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.12 E-value=0.002 Score=50.05 Aligned_cols=115 Identities=15% Similarity=0.158 Sum_probs=68.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.+.|+||+|.+|.++|..|+.+|. ++++.+.++.+.+ ..++... ........-+. ..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~------------------~~~~~~~~~~~-~~ 60 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHI------------------ETRATVKGYLG-PE 60 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTS------------------SSSCEEEEEES-GG
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhh------------------hhhcCCCeEEc-CC
Confidence 578999999999999999999984 7999998875433 2344221 11111111111 22
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
+..+.+ ..-|++|..||... .+ ..+. ...++.|.. .++.+.+.+.+....+.|+++|-
T Consensus 61 ~~~~~~-------~~aDivVitag~~~--~~--g~sR---~~ll~~N~~----i~~~i~~~i~~~~p~~iiivvtN 118 (144)
T d1mlda1 61 QLPDCL-------KGCDVVVIPAGVPR--KP--GMTR---DDLFNTNAT----IVATLTAACAQHCPDAMICIISN 118 (144)
T ss_dssp GHHHHH-------TTCSEEEECCSCCC--CT--TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred ChHHHh-------CCCCEEEECCCcCC--CC--CCCc---chHHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence 222222 26899999999753 22 1222 224555544 44556666665545677777753
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.11 E-value=0.00021 Score=57.38 Aligned_cols=42 Identities=17% Similarity=0.120 Sum_probs=36.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
.+.+|||+||++|+|.+.++.....|++|+.+++++++.+.+
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~ 64 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL 64 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence 356899999999999999988888999999999998876543
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.10 E-value=0.0027 Score=49.60 Aligned_cols=120 Identities=12% Similarity=0.063 Sum_probs=73.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
..+.|.|+ |.+|..+|..|+.++ .++++.++++++.+....++.....- ...+......| +.+
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~v~~~~--~~~ 67 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVM-------------AYSNCKVSGSN--TYD 67 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHH-------------HTCCCCEEEEC--CGG
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccc-------------cCCCcEEEecc--ccc
Confidence 46788896 899999999888888 58999999998888777777553210 11222222222 111
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
....-|++|..+|.....+.. .+.+. ...+..|. .+.+.+.+.+.+....+.++++|
T Consensus 68 -----------~~~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~----~iv~~i~~~i~~~~p~aivivvt 125 (150)
T d1t2da1 68 -----------DLAGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVT 125 (150)
T ss_dssp -----------GGTTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECS
T ss_pred -----------ccCCCcEEEEecccccCCCCCccccch---hHHHHHHH----HHHHHHHHHHHhcCCCeEEEEec
Confidence 123579999999975411111 11111 22344443 45666667666654567777775
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.09 E-value=0.0025 Score=50.00 Aligned_cols=116 Identities=14% Similarity=0.134 Sum_probs=66.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC---------eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD---------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI 83 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~---------~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
-.|.|+||+|.+|..++..|+..+. +++...++.++++....++... .......+
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 68 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----------------AFPLLAGL 68 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----------------TCTTEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc----------------cccccccc
Confidence 4789999999999999999998652 2333455666666555555432 11122222
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-CCCcEE
Q 019009 84 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHI 162 (347)
Q Consensus 84 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~-~~~g~I 162 (347)
...-.+. +.+...|++|..||... . ...+.++ .+..|+ ...+.+.+.+.+. ++.+.|
T Consensus 69 ~~~~~~~-----------~~~~~advViitaG~~~--~--pg~~r~d---l~~~N~----~i~~~~~~~i~k~a~~~~~v 126 (154)
T d1y7ta1 69 EATDDPK-----------VAFKDADYALLVGAAPR--K--AGMERRD---LLQVNG----KIFTEQGRALAEVAKKDVKV 126 (154)
T ss_dssp EEESCHH-----------HHTTTCSEEEECCCCCC--C--TTCCHHH---HHHHHH----HHHHHHHHHHHHHSCTTCEE
T ss_pred ccCCchh-----------hhcccccEEEeecCcCC--C--CCCcHHH---HHHHHH----HHHHHHHHHHHHhCCCCcEE
Confidence 2221111 12236899999999853 2 2334333 344443 4556666666653 234556
Q ss_pred EEEc
Q 019009 163 FNMD 166 (347)
Q Consensus 163 v~vs 166 (347)
+.+|
T Consensus 127 ivvs 130 (154)
T d1y7ta1 127 LVVG 130 (154)
T ss_dssp EECS
T ss_pred EEec
Confidence 5654
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.08 E-value=0.00032 Score=56.79 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=36.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
+.++||+||+||+|...++.....|++|+.++|++++.+.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~ 71 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY 71 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH
Confidence 4689999999999999999888999999999999988653
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.06 E-value=0.0012 Score=53.00 Aligned_cols=80 Identities=9% Similarity=0.096 Sum_probs=52.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
-..|.+|+|.|+ ++||...+..+...|++ |+++++++++++.+. ++ +. ..++ |.
T Consensus 26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~--------------------Ga-~~~i--~~ 80 (174)
T d1f8fa2 26 VTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL--------------------GA-THVI--NS 80 (174)
T ss_dssp CCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH--------------------TC-SEEE--ET
T ss_pred CCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc--------------------CC-eEEE--eC
Confidence 456889999998 89999999988888985 556678887765432 22 11 1222 44
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.+ +.+.+.++. .+++|++|.+.|.
T Consensus 81 ~~~~-~~~~i~~~t--~gg~D~vid~~G~ 106 (174)
T d1f8fa2 81 KTQD-PVAAIKEIT--DGGVNFALESTGS 106 (174)
T ss_dssp TTSC-HHHHHHHHT--TSCEEEEEECSCC
T ss_pred CCcC-HHHHHHHHc--CCCCcEEEEcCCc
Confidence 4433 333333332 2479999999985
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.04 E-value=0.0013 Score=52.31 Aligned_cols=43 Identities=21% Similarity=-0.015 Sum_probs=36.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...|.+++|.|+ +++|...++.+...|++|+++++++++++.+
T Consensus 25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a 67 (168)
T d1piwa2 25 CGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA 67 (168)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred cCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence 356899999987 8999998888778999999999999987643
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.03 E-value=0.0023 Score=51.36 Aligned_cols=44 Identities=9% Similarity=0.071 Sum_probs=38.4
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
+...|.+|+|+|+ +|+|...+..+...|+ +|+++++++++++.+
T Consensus 26 ~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A 70 (176)
T d1d1ta2 26 KVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA 70 (176)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH
Confidence 3567899999986 8999999999999995 899999999998644
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=97.02 E-value=0.0017 Score=52.11 Aligned_cols=44 Identities=9% Similarity=0.027 Sum_probs=37.2
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRM 51 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~ 51 (347)
.....|.+|+|.|+ +|||...+..+...|+ +|+++++++++++.
T Consensus 24 a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~ 68 (174)
T d1e3ia2 24 AKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK 68 (174)
T ss_dssp SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred hCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH
Confidence 34567899999975 9999999999999998 68888999988743
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.01 E-value=0.00076 Score=51.50 Aligned_cols=73 Identities=14% Similarity=0.226 Sum_probs=54.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|.++|.|+ |-+|+.+|+.|.++|++|++++.|+++.+++.+ . ....+..|.++++.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~---------------------~--~~~~~~gd~~~~~~ 56 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---------------------Y--ATHAVIANATEENE 56 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT---------------------T--CSEEEECCTTCTTH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH---------------------h--CCcceeeecccchh
Confidence 56788877 689999999999999999999999988765421 1 23456789999887
Q ss_pred HHHHHHHHHhhcCCccEEEEcCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG 115 (347)
++++- ....|.+|...+
T Consensus 57 l~~a~------i~~a~~vi~~~~ 73 (134)
T d2hmva1 57 LLSLG------IRNFEYVIVAIG 73 (134)
T ss_dssp HHHHT------GGGCSEEEECCC
T ss_pred hhccC------CccccEEEEEcC
Confidence 76641 124688776553
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.01 E-value=0.016 Score=44.62 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=71.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
.+.|+|+ |.+|.++|..++.+|. ++++.++++++++....+++....- .+........| .+
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~-------------~~~~~i~~~~~---~~ 65 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSF-------------YPTVSIDGSDD---PE 65 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGG-------------STTCEEEEESC---GG
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhcccc-------------CCCceeecCCC---HH
Confidence 4677797 8999999999999984 8999999999887777777663211 11111111222 21
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++ ..-|++|..||... .+ ..+.+ +.+..|. .+.+...+.+.+....+.++++|
T Consensus 66 ~~-----------~daDvVVitaG~~~--~~--g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 66 IC-----------RDADMVVITAGPRQ--KP--GQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp GG-----------TTCSEEEECCCCCC--CT--TCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred Hh-----------hCCcEEEEeccccc--CC--CCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence 11 24699999999753 21 23332 3455554 45566666666654566666665
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.99 E-value=0.0086 Score=46.06 Aligned_cols=114 Identities=17% Similarity=0.104 Sum_probs=68.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
+.|+|| |.+|..+|..|+.+| .++++.++++++++....++...... .......... .+.++
T Consensus 3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~-------------~~~~~~i~~~--~~~~~ 66 (142)
T d1guza1 3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPV-------------GLFDTKVTGS--NDYAD 66 (142)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHH-------------HTCCCEEEEE--SCGGG
T ss_pred EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccch-------------hcccceEEec--CCHHH
Confidence 567796 899999999999998 58999999998877665555432110 0112222211 22222
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+...|++|..||... .+ ..+. ...++.|. .+++...+.+.+....+.++++|
T Consensus 67 -----------~~dadvvvitag~~~--~~--g~~r---~~l~~~N~----~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1guza1 67 -----------TANSDIVIITAGLPR--KP--GMTR---EDLLMKNA----GIVKEVTDNIMKHSKNPIIIVVS 118 (142)
T ss_dssp -----------GTTCSEEEECCSCCC--CT--TCCH---HHHHHHHH----HHHHHHHHHHHHHCSSCEEEECC
T ss_pred -----------hcCCeEEEEEEecCC--CC--CCch---HHHHHHHH----HHHHHHHHHhhccCCCeEEEEec
Confidence 236799999999854 11 1222 23344443 34555666665544567777764
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.98 E-value=0.0014 Score=52.20 Aligned_cols=77 Identities=17% Similarity=0.099 Sum_probs=54.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
...|.+|+|.|+ +|||...++.+...|++++++++++++.+. .+++ +... ..|..
T Consensus 28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l--------------------Gad~---~i~~~ 82 (168)
T d1uufa2 28 AGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL--------------------GADE---VVNSR 82 (168)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH--------------------TCSE---EEETT
T ss_pred CCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc--------------------CCcE---EEECc
Confidence 356899999986 899999998888899999999999887643 2333 2221 23555
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
+.+... ....++|++|.+.|..
T Consensus 83 ~~~~~~-------~~~~~~D~vid~~g~~ 104 (168)
T d1uufa2 83 NADEMA-------AHLKSFDFILNTVAAP 104 (168)
T ss_dssp CHHHHH-------TTTTCEEEEEECCSSC
T ss_pred hhhHHH-------HhcCCCceeeeeeecc
Confidence 544322 2224799999999853
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.96 E-value=0.011 Score=47.11 Aligned_cols=121 Identities=9% Similarity=0.111 Sum_probs=65.8
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCC---C----eEEEEeCCh--hHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSG---D----RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVH 77 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G---~----~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 77 (347)
.+|+...+|.||||+|.||..++..|++.. . .+.+.+.+. +.++...-++.... .
T Consensus 19 ~~~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a----------------~ 82 (175)
T d7mdha1 19 KSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL----------------Y 82 (175)
T ss_dssp --CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT----------------C
T ss_pred hccCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc----------------c
Confidence 344555579999999999999999999753 1 455555544 34444444544321 1
Q ss_pred ceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcC-
Q 019009 78 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ- 156 (347)
Q Consensus 78 ~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~- 156 (347)
.....+.. -++. .+.+...|++|..+|... . ...+.+ ..++.|. .+.+...+.+.+.
T Consensus 83 ~~~~~~~~-~~~~----------~~~~~~aDvVvi~ag~~r--k--pg~tR~---Dll~~N~----~I~k~~~~~i~~~a 140 (175)
T d7mdha1 83 PLLREVSI-GIDP----------YEVFEDVDWALLIGAKPR--G--PGMERA---ALLDING----QIFADQGKALNAVA 140 (175)
T ss_dssp TTEEEEEE-ESCH----------HHHTTTCSEEEECCCCCC--C--TTCCHH---HHHHHHH----HHHHHHHHHHHHHS
T ss_pred ccccCccc-cccc----------hhhccCCceEEEeeccCC--C--CCCcHH---HHHHHHH----HHHHHHHHHHHhhC
Confidence 11111111 1121 122347899999999753 1 233433 3555553 4556666666653
Q ss_pred CCCcEEEEE
Q 019009 157 PKGGHIFNM 165 (347)
Q Consensus 157 ~~~g~Iv~v 165 (347)
++...|+.+
T Consensus 141 ~~~~~vlvv 149 (175)
T d7mdha1 141 SKNVKVLVV 149 (175)
T ss_dssp CTTCEEEEC
T ss_pred CCCcEEEEe
Confidence 223445555
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.95 E-value=0.0017 Score=50.31 Aligned_cols=114 Identities=16% Similarity=0.183 Sum_probs=66.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+.+.|.|+ |.+|..+|..++.+|. ++++.++++++++....++..... .......... +.
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~--------------~~~~~~~~~~---~~ 63 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--------------FMGQMSLYAG---DY 63 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--------------CTTCEEEC-----CG
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcc--------------cCCCeeEeeC---cH
Confidence 35667797 9999999999999984 799999999877666666654211 1112221111 22
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ ....-|++|..||... .+ ..+ -...+..|. .+.+.+.+.+.+....+.++++|
T Consensus 64 ~-----------~~~~adivvitag~~~--~~--~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 64 S-----------DVKDCDVIVVTAGANR--KP--GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp G-----------GGTTCSEEEECCCC----------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECS
T ss_pred H-----------HhCCCceEEEeccccc--Cc--Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEec
Confidence 1 2236799999999753 11 122 234455554 55666667776654567777765
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.93 E-value=0.0042 Score=47.97 Aligned_cols=116 Identities=15% Similarity=0.099 Sum_probs=70.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
|++.|.|+ |.+|.++|..|+.++ .++++.+.++++.+....++.....- .........+ .|.+
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~-------------~~~~~~i~~~--~d~~ 65 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPI-------------EGFDVRVTGT--NNYA 65 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHH-------------HTCCCCEEEE--SCGG
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccc-------------cCCCCEEEec--CcHH
Confidence 56778896 899999999999888 58999999998877766666532110 0111111111 1111
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+ ...-|++|.+||... .+ ..+ -.+.+..|. .+++...+.+.+....+.++++|
T Consensus 66 ~-----------~~~advvvitag~~~--~~--~~~---r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 66 D-----------TANSDVIVVTSGAPR--KP--GMS---REDLIKVNA----DITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp G-----------GTTCSEEEECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred H-----------hcCCCEEEEeeeccC--Cc--Ccc---hhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence 1 125799999999753 11 111 123344443 57788888887765567666664
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.93 E-value=0.0024 Score=50.43 Aligned_cols=43 Identities=12% Similarity=-0.048 Sum_probs=37.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
...|.+++|.|+ +++|...+..+...|++|+++++++++++.+
T Consensus 25 ~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a 67 (166)
T d1llua2 25 ARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA 67 (166)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence 356789999886 8999999998888999999999999887543
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.88 E-value=0.0015 Score=52.44 Aligned_cols=44 Identities=9% Similarity=0.040 Sum_probs=37.9
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
.-..|.+|+|.|+ +|+|...++.+...|+ +|+++++++++++.+
T Consensus 24 ~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a 68 (174)
T d1p0fa2 24 KVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA 68 (174)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH
Confidence 3567899999996 8999999999999996 799999999988654
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.84 E-value=0.0022 Score=51.14 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=34.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
.+|.+++|.|+ +++|...+..+...|+ +|+++++++++++.+
T Consensus 31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~ 73 (172)
T d1h2ba2 31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA 73 (172)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHH
Confidence 56789999986 9999999998888886 677788988876543
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.0078 Score=46.57 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=66.9
Q ss_pred eEEEEcCCChHHHHHHHHHHH-CC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 14 RWFSVVSTRGLGKALAREFLL-SG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~-~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+.|+|++|.+|.++|..|+. .+ .++++.+.++ ..+...-++.... ....... ..+-.+.
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~---------------~~~~~~~-~~~~~~~ 64 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP---------------TAVKIKG-FSGEDAT 64 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSC---------------SSCEEEE-ECSSCCH
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCc---------------cccCCcE-EEcCCCc
Confidence 468999999999999998864 44 6899999865 4444445554421 1111222 2222333
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+.++ .-|++|..||... .+ ..+. .+.+..|. .+.+...+.+.+....+.|+++|
T Consensus 65 ~~~~-----------~aDvvvitaG~~~--k~--g~~R---~dl~~~N~----~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 65 PALE-----------GADVVLISAGVRR--KP--GMDR---SDLFNVNA----GIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp HHHT-----------TCSEEEECCSCCC--CT--TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECS
T ss_pred cccC-----------CCCEEEECCCccC--CC--Ccch---hhHHHHHH----HHHHHHHHHHHhhCCCcEEEEcc
Confidence 2211 4699999999854 22 1222 23455564 34555556665554566777775
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.76 E-value=0.00064 Score=57.04 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=53.1
Q ss_pred CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 019009 11 CTCRWFSVVS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 74 (347)
Q Consensus 11 ~~k~vlITGa----------------s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 74 (347)
.||+||||+| ||-+|.+||+++..+|++|.++.......
T Consensus 5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~------------------------- 59 (223)
T d1u7za_ 5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------------------------- 59 (223)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-------------------------
T ss_pred CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-------------------------
Confidence 4789999984 56899999999999999999987543210
Q ss_pred ccCceeeEEecCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 75 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 75 ~~~~~~~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
....+..+ .+.+.+++.+.+. +.+...|++|.+|.+..
T Consensus 60 -~p~~~~~~--~~~t~~~m~~~~~---~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 60 -TPPFVKRV--DVMTALEMEAAVN---ASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp -CCTTEEEE--ECCSHHHHHHHHH---HHGGGCSEEEECCBCCS
T ss_pred -cccccccc--eehhhHHHHHHHH---hhhccceeEeeeechhh
Confidence 11233333 3455556555444 34446799999999865
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.70 E-value=0.0018 Score=51.65 Aligned_cols=82 Identities=15% Similarity=0.105 Sum_probs=53.6
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
....|.+|+|.|+ +|+|...++.+...|+ +|+.+++++++++. .+++ +.. .++ |
T Consensus 25 ~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l--------------------Ga~-~~i--~ 79 (176)
T d2fzwa2 25 KLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF--------------------GAT-ECI--N 79 (176)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH--------------------TCS-EEE--C
T ss_pred CCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh--------------------CCc-EEE--e
Confidence 3467899999998 5999999999999996 57777888887643 3333 111 122 2
Q ss_pred CC-CHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 87 VC-EPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 87 ls-~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.. +.+.+.+.++... .+++|++|.+.|.
T Consensus 80 ~~~~~~~~~~~~~~~~--~~g~D~vid~~G~ 108 (176)
T d2fzwa2 80 PQDFSKPIQEVLIEMT--DGGVDYSFECIGN 108 (176)
T ss_dssp GGGCSSCHHHHHHHHT--TSCBSEEEECSCC
T ss_pred CCchhhHHHHHHHHHc--CCCCcEeeecCCC
Confidence 22 1233444444332 2479999999974
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.66 E-value=0.0025 Score=52.04 Aligned_cols=82 Identities=12% Similarity=0.051 Sum_probs=54.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
...|.+|+|.|+ +++|...+..+...|+ +|+++++++++++.+.+ .+... ..|-
T Consensus 23 v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~---------------------~Ga~~---~~~~ 77 (195)
T d1kola2 23 VGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA---------------------QGFEI---ADLS 77 (195)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---------------------TTCEE---EETT
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh---------------------ccccE---EEeC
Confidence 456899999987 7999888888878887 78999999988754322 22222 1233
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
.+. ++.+.+.++.. ..++|++|.+.|..
T Consensus 78 ~~~-~~~~~i~~~t~-g~g~D~vid~vG~~ 105 (195)
T d1kola2 78 LDT-PLHEQIAALLG-EPEVDCAVDAVGFE 105 (195)
T ss_dssp SSS-CHHHHHHHHHS-SSCEEEEEECCCTT
T ss_pred CCc-CHHHHHHHHhC-CCCcEEEEECcccc
Confidence 333 33333333322 23699999999854
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.65 E-value=0.0081 Score=47.90 Aligned_cols=97 Identities=18% Similarity=0.029 Sum_probs=60.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCc--ccccCceeeEEecCCCCH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK--KNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dls~~ 90 (347)
++|-|.|- +-+|..+|+.|+++|++|++.+|++++.+++.++-..... ..+.... ....-.....+...+.+.
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~----~~~a~~~~~~~~~~~~~~~ii~~~~~~ 77 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTK----VLGAHSLEEMVSKLKKPRRIILLVKAG 77 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSS----CEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccc----ccchhhhhhhhhhhcccceEEEecCch
Confidence 56788887 6899999999999999999999999988766542100000 0000000 000011223444566777
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
+.+....+.+.....+=+++|...
T Consensus 78 ~~v~~v~~~l~~~~~~g~iiid~s 101 (176)
T d2pgda2 78 QAVDNFIEKLVPLLDIGDIIIDGG 101 (176)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEECS
T ss_pred HHHHHHHHHHHhccccCcEEEecC
Confidence 888888888776655556777765
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0021 Score=52.48 Aligned_cols=47 Identities=17% Similarity=0.227 Sum_probs=42.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL 60 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~ 60 (347)
|+|.|.|| |-||..+|..++.+|++|++.+++++.+++..+.+++..
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l 51 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESL 51 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHH
Confidence 78999998 679999999999999999999999999888887776643
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.62 E-value=0.0041 Score=48.98 Aligned_cols=41 Identities=17% Similarity=0.032 Sum_probs=35.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
..|.+++|.|+ |+||...+..+...|++|+++++++++++.
T Consensus 26 ~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~ 66 (168)
T d1rjwa2 26 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL 66 (168)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh
Confidence 46789999875 899999999988999999999999988754
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.61 E-value=0.0036 Score=49.82 Aligned_cols=44 Identities=9% Similarity=0.038 Sum_probs=35.5
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT 52 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~ 52 (347)
.-+.|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++++.+
T Consensus 25 ~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a 69 (175)
T d1cdoa2 25 KVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA 69 (175)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH
Confidence 3467899999986 6788888888888886 688899999987543
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.55 E-value=0.0021 Score=51.23 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=38.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE 55 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~ 55 (347)
.+|.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.++..+.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~ 60 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL 60 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence 4688999987 7999999999999996 799999999987766544
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.51 E-value=0.005 Score=47.90 Aligned_cols=75 Identities=12% Similarity=0.038 Sum_probs=58.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV 93 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v 93 (347)
.++|.|. +-+|+.+++.|.++|.+|+++..++++..+..++... ..+.++..|.+|++.+
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-------------------~~~~vi~Gd~~d~~~L 64 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-------------------DNADVIPGDSNDSSVL 64 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-------------------TTCEEEESCTTSHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-------------------CCcEEEEccCcchHHH
Confidence 5788887 5899999999999999999999999876655555432 3577889999998877
Q ss_pred HHHHHHHHhhcCCccEEEEcC
Q 019009 94 QKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 94 ~~~~~~i~~~~g~iD~li~nA 114 (347)
+++- ....|.+|...
T Consensus 65 ~~a~------i~~a~~vi~~~ 79 (153)
T d1id1a_ 65 KKAG------IDRCRAILALS 79 (153)
T ss_dssp HHHT------TTTCSEEEECS
T ss_pred HHhc------cccCCEEEEcc
Confidence 6652 13567887655
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.51 E-value=0.08 Score=40.37 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=71.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEE-ecCCCCH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-ACDVCEP 90 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dls~~ 90 (347)
.+.|.|+ |.+|..+|..++.+| .++++.++++++.+....++...... ........ .-|.
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~-------------~~~~~~i~~~~d~--- 64 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-------------IDKYPKIVGGADY--- 64 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT-------------TTCCCEEEEESCG---
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccc-------------cCCCCccccCCCH---
Confidence 3556686 999999999999888 47999999999888777777654321 11111112 1222
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
++ ...-|++|..||... .+ ..+. ...+..| ..+.+...+.+.+....+.++++|
T Consensus 65 ~~-----------~~~adiVvitag~~~--~~--g~~r---~~l~~~n----~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 65 SL-----------LKGSEIIVVTAGLAR--KP--GMTR---LDLAHKN----AGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp GG-----------GTTCSEEEECCCCCC--CS--SCCH---HHHHHHH----HHHHHHHHHHHHTTSTTCEEEECS
T ss_pred HH-----------hccccEEEEeccccC--CC--CCch---HHHHHHh----hHHHHHHHHHHHhhCCCcEEEEec
Confidence 21 135799999999754 21 2232 2233333 346677777777765567776665
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.47 E-value=0.015 Score=46.84 Aligned_cols=47 Identities=11% Similarity=0.102 Sum_probs=41.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL 60 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~ 60 (347)
|+|.|.|| |-||..+|..++..|++|++.+++++.+++..+.+....
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l 51 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLL 51 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhH
Confidence 67899998 679999999999999999999999998888777766543
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.40 E-value=0.0029 Score=50.50 Aligned_cols=40 Identities=15% Similarity=0.141 Sum_probs=35.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV 53 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~ 53 (347)
|++.|.|+ |.+|.++|..|+++|++|.+.+|++++.+...
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~ 41 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ 41 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 78999998 68999999999999999999999988765543
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.36 E-value=0.0046 Score=48.04 Aligned_cols=40 Identities=23% Similarity=0.156 Sum_probs=36.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
..|++.|.||.|-||..+|+.|.+.|++|.+.+|+.....
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA 47 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence 3589999999999999999999999999999999887543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.35 E-value=0.014 Score=45.68 Aligned_cols=90 Identities=17% Similarity=0.085 Sum_probs=55.2
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
+.|.|+ |-+|.++|+.|.+.|++|++.+|+++.++++.+.-. .+. . ..........++..+.+ ..+.++
T Consensus 3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~---~~~--~--~~~~~~~~~~DiIilav---p~~~~~ 71 (165)
T d2f1ka2 3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL---VDE--A--GQDLSLLQTAKIIFLCT---PIQLIL 71 (165)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS---CSE--E--ESCGGGGTTCSEEEECS---CHHHHH
T ss_pred EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhc---cce--e--eeecccccccccccccC---cHhhhh
Confidence 566665 899999999999999999999999887665433110 000 0 00111112234444433 357888
Q ss_pred HHHHHHHhhcCCccEEEEcCC
Q 019009 95 KLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nAG 115 (347)
++++++.....+=.++++.++
T Consensus 72 ~vl~~l~~~l~~~~iv~~~~s 92 (165)
T d2f1ka2 72 PTLEKLIPHLSPTAIVTDVAS 92 (165)
T ss_dssp HHHHHHGGGSCTTCEEEECCS
T ss_pred hhhhhhhhhcccccceeeccc
Confidence 888888665544455655543
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.14 E-value=0.0046 Score=49.51 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=41.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEEN 59 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~ 59 (347)
.+|+|+|.|+ ||.+++++..|.+.| +|++..|+.++.++..+++...
T Consensus 17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~ 63 (177)
T d1nvta1 17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK 63 (177)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence 5799999986 589999999998777 9999999999999988888764
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.07 E-value=0.019 Score=42.01 Aligned_cols=36 Identities=19% Similarity=0.134 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.||+++|.|++ -+|..-|+.|++.|++|++++....
T Consensus 11 ~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 11 RDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp BTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence 47999999987 5999999999999999999987654
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.013 Score=50.70 Aligned_cols=25 Identities=28% Similarity=0.355 Sum_probs=21.7
Q ss_pred CChHHHHHHHHHHHCCCeEEEEeCC
Q 019009 21 TRGLGKALAREFLLSGDRVVVASRS 45 (347)
Q Consensus 21 s~GIG~aiA~~la~~G~~Vil~~R~ 45 (347)
||-.|.++|+.|..+|++|+++.+.
T Consensus 45 SGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 45 SGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred chHHHHHHHHHHHHcCCEEEEEecC
Confidence 4578999999999999999998643
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.01 E-value=0.02 Score=44.69 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=53.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
|-|.|. +-+|..+|+.|+++|++|++.+|++++.+++.+.-.....+ +...-.+...+-+=+.+.++++
T Consensus 3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~----------~~e~~~~~d~ii~~v~~~~~v~ 71 (161)
T d1vpda2 3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETAST----------AKAIAEQCDVIITMLPNSPHVK 71 (161)
T ss_dssp EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSS----------HHHHHHHCSEEEECCSSHHHHH
T ss_pred EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhccc----------HHHHHhCCCeEEEEcCCHHHHH
Confidence 455554 78999999999999999999999998877654321000000 0000112334444567788888
Q ss_pred HHH---HHHHhhcCCccEEEEcC
Q 019009 95 KLS---NFAVNEFGSIDIWINNA 114 (347)
Q Consensus 95 ~~~---~~i~~~~g~iD~li~nA 114 (347)
.++ +.+.....+=+++|.+.
T Consensus 72 ~v~~~~~~~~~~~~~g~iiid~s 94 (161)
T d1vpda2 72 EVALGENGIIEGAKPGTVLIDMS 94 (161)
T ss_dssp HHHHSTTCHHHHCCTTCEEEECS
T ss_pred HHHhCCcchhhccCCCCEEEECC
Confidence 876 23333333335666554
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.77 E-value=0.061 Score=41.58 Aligned_cols=34 Identities=9% Similarity=-0.029 Sum_probs=26.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-------RVVVASRSS 46 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-------~Vil~~R~~ 46 (347)
-.|.|+||+|.+|..+|..|+..+. .+++.+.+.
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~ 44 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP 44 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence 4789999999999999999987542 356665544
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.43 E-value=0.0076 Score=42.72 Aligned_cols=36 Identities=14% Similarity=-0.078 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.||+++|.|. +.-|.++|+.|+++|++|++.+.+..
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 3689999998 56899999999999999999988654
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.16 E-value=0.069 Score=41.51 Aligned_cols=41 Identities=17% Similarity=0.079 Sum_probs=34.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV 53 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~ 53 (347)
+++|-|.|- +-+|.++|++|+++|++|.+.+|++++.+.+.
T Consensus 1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~ 41 (162)
T d3cuma2 1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV 41 (162)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence 356777764 67999999999999999999999988766544
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=95.13 E-value=0.097 Score=41.17 Aligned_cols=36 Identities=19% Similarity=0.164 Sum_probs=31.8
Q ss_pred CCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 019009 20 STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE 55 (347)
Q Consensus 20 as~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~ 55 (347)
|.+-+|.++|++|++.|++|++.+|++++.+++.++
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~ 43 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA 43 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence 567899999999999999999999999988776654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=95.08 E-value=0.19 Score=39.33 Aligned_cols=121 Identities=10% Similarity=0.087 Sum_probs=66.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-----CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 14 RWFSVVSTRGLGKALAREFLLS-----GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~-----G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+.|.||++.....+...++.+ +.+|++.+.++++++...+.++..... .+........ +
T Consensus 5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~--~ 69 (167)
T d1u8xx1 5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIRE-------------KAPDIEFAAT--T 69 (167)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHH-------------HCTTSEEEEE--S
T ss_pred eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHH-------------hCCCcceEec--C
Confidence 4677787654222233333332 348999999999988666655443221 1111111111 1
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhh----------------hHHHHHHHHHHHH
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL----------------VGSILCTREAMRV 152 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~----------------~g~~~l~~~~lp~ 152 (347)
|. .+.+ ..-|++|+.+|... . +...-++.+..|+ +-.+.+++.+.+.
T Consensus 70 d~---~eal-------~~AD~Vvitag~~~--~-----~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~ 132 (167)
T d1u8xx1 70 DP---EEAF-------TDVDFVMAHIRVGK--Y-----AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDY 132 (167)
T ss_dssp CH---HHHH-------SSCSEEEECCCTTH--H-----HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ch---hhcc-------CCCCEEEECCCcCC--C-----CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHH
Confidence 21 2222 36799999999743 1 1223334444442 2234566777777
Q ss_pred hHcCCCCcEEEEEc
Q 019009 153 MRDQPKGGHIFNMD 166 (347)
Q Consensus 153 l~~~~~~g~Iv~vs 166 (347)
+.+....+.++++|
T Consensus 133 i~~~~P~A~li~~T 146 (167)
T d1u8xx1 133 MEKYSPDAWMLNYS 146 (167)
T ss_dssp HHHHCTTCEEEECC
T ss_pred HHhhCCCeEEEEeC
Confidence 77765677888875
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=95.01 E-value=0.06 Score=42.24 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=54.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
-+++|.|+. -.|++-++...+.|++|.+.+.+.++++++..... ..+.+ -.++.+.
T Consensus 33 a~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~--------------------~~~~~---~~~~~~~ 88 (168)
T d1pjca1 33 GKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--------------------SRVEL---LYSNSAE 88 (168)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------------------GGSEE---EECCHHH
T ss_pred cEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc--------------------cccee---ehhhhhh
Confidence 578888875 68999999999999999999999998876543321 22333 2455666
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
+++.+. .-|++|..+=+..
T Consensus 89 l~~~~~-------~aDivI~aalipG 107 (168)
T d1pjca1 89 IETAVA-------EADLLIGAVLVPG 107 (168)
T ss_dssp HHHHHH-------TCSEEEECCCCTT
T ss_pred HHHhhc-------cCcEEEEeeecCC
Confidence 655544 5799999997755
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=94.78 E-value=0.33 Score=37.94 Aligned_cols=123 Identities=12% Similarity=0.046 Sum_probs=67.9
Q ss_pred eEEEEcCCChHH--HHHHHHHHHC----CCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 14 RWFSVVSTRGLG--KALAREFLLS----GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 14 ~vlITGas~GIG--~aiA~~la~~----G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.+.|.|| |.+| .++...++.. +.++++.++++++++.....++..... .+....... -
T Consensus 4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~-------------~~~~~~i~~--~ 67 (171)
T d1obba1 4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEE-------------VGADLKFEK--T 67 (171)
T ss_dssp EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHH-------------TTCCCEEEE--E
T ss_pred EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHh-------------cCCCeEEEE--e
Confidence 5667776 3444 4555556643 469999999999988766666553321 111222111 1
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHH-HHHHHH---------Hhh---------hhHHHHHHHH
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE-EIEQIV---------STN---------LVGSILCTRE 148 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e-~~~~~~---------~vN---------~~g~~~l~~~ 148 (347)
+|. ++.+ ...|++|+.++... ....+.+ .+.... +.+ .+..+-+++.
T Consensus 68 td~---~eaL-------~dad~Vv~~~~~g~----~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~ 133 (171)
T d1obba1 68 MNL---DDVI-------IDADFVINTAMVGG----HTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVD 133 (171)
T ss_dssp SCH---HHHH-------TTCSEEEECCCTTH----HHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHH
T ss_pred CCh---hhcc-------cCCCeEeeeccccc----ccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHH
Confidence 222 2222 36899999998643 1111000 000000 001 2236677888
Q ss_pred HHHHhHcCCCCcEEEEEc
Q 019009 149 AMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 149 ~lp~l~~~~~~g~Iv~vs 166 (347)
+.+.+++....+.++++|
T Consensus 134 i~~~i~~~~p~a~~i~~T 151 (171)
T d1obba1 134 IARKIEKLSPKAWYLQAA 151 (171)
T ss_dssp HHHHHHHHCTTCEEEECS
T ss_pred HHHHHHHHCcCeEEEEEC
Confidence 888888766677888885
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.64 E-value=0.014 Score=47.12 Aligned_cols=38 Identities=26% Similarity=0.157 Sum_probs=33.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
++++.|.||+ -.|.++|..|++.|++|.+.+|+++..+
T Consensus 7 m~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~ 44 (189)
T d1n1ea2 7 LNKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVR 44 (189)
T ss_dssp EEEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHH
T ss_pred eceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHH
Confidence 4678999976 5999999999999999999999987554
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=94.57 E-value=0.036 Score=45.12 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=35.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
..||+++|-| -|.+|..+|+.|.+.|++|++++.+.+++..
T Consensus 25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~ 65 (201)
T d1c1da1 25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH 65 (201)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence 4579999998 6679999999999999999999998877654
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.36 E-value=0.042 Score=42.96 Aligned_cols=41 Identities=20% Similarity=0.135 Sum_probs=34.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChhHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTV 53 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~~~l~~~~ 53 (347)
+|+++|.|. |-||..+|+.|.+.|+ +|+..+|+++.++.+.
T Consensus 1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~ 43 (171)
T d2g5ca2 1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV 43 (171)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence 478999986 7999999999999995 7888999988765543
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=94.33 E-value=0.22 Score=36.04 Aligned_cols=84 Identities=14% Similarity=0.200 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+.++.|.|| |=+|+-++....+.|++|++.+.+++.-. ...--.++..|..|.
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA-------------------------~~va~~~i~~~~~d~ 63 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA-------------------------MHVAHRSHVINMLDG 63 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG-------------------------GGGSSEEEECCTTCH
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCch-------------------------hhcCCeEEECCCCCH
Confidence 3467999995 57999999999999999999998765310 011224677899999
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHH
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 134 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~ 134 (347)
+.+.+++... .+|++.. .++.++.+-++..
T Consensus 64 ~~l~~~~~~~-----~~DviT~---------E~EnI~~~~L~~l 93 (111)
T d1kjqa2 64 DALRRVVELE-----KPHYIVP---------EIEAIATDMLIQL 93 (111)
T ss_dssp HHHHHHHHHH-----CCSEEEE---------CSSCSCHHHHHHH
T ss_pred HHHHHHHHhh-----CCceEEE---------EecCcCHHHHHHH
Confidence 9999887653 6898842 3456666655444
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.21 E-value=0.023 Score=44.08 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=30.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES 48 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~ 48 (347)
+|+|.|+ |.||..+|..|++.|++|.+++|+++.
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~ 35 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP 35 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence 5788888 899999999999999999999998764
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.12 E-value=0.037 Score=41.33 Aligned_cols=70 Identities=14% Similarity=0.042 Sum_probs=50.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
|.++|.|. +.+|..+++.| +|.+|+++..++++.+.. .. ..+.++..|.++++.
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~-------------------~~~~~i~Gd~~~~~~ 54 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LR-------------------SGANFVHGDPTRVSD 54 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HH-------------------TTCEEEESCTTSHHH
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hh-------------------cCccccccccCCHHH
Confidence 67888886 67999999998 466788889988876533 22 246678899999887
Q ss_pred HHHHHHHHHhhcCCccEEEEcC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nA 114 (347)
++++ .....+.+|...
T Consensus 55 L~~a------~i~~A~~vi~~~ 70 (129)
T d2fy8a1 55 LEKA------NVRGARAVIVNL 70 (129)
T ss_dssp HHHT------TCTTCSEEEECC
T ss_pred HHHh------hhhcCcEEEEec
Confidence 7664 223567777644
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.64 E-value=0.049 Score=41.99 Aligned_cols=40 Identities=8% Similarity=0.126 Sum_probs=32.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE 55 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~ 55 (347)
+.|. |.|-+|.++++.|.+.|++|++..|+.++.++..++
T Consensus 3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~ 42 (152)
T d2ahra2 3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ 42 (152)
T ss_dssp EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH
T ss_pred EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccc
Confidence 4445 466899999999999999999999999887665543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=93.59 E-value=0.055 Score=41.61 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=32.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChhHHHHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVT 54 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~~~~l~~~~~ 54 (347)
++.+.|+ |-+|.++++.|.+.| ++|++.+|++++.++..+
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~ 42 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEK 42 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhh
Confidence 3566666 789999999999888 899999999988765544
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.48 E-value=0.031 Score=43.00 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=31.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS 45 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~ 45 (347)
..||++||.||+ .+|..-++.|++.|++|++++..
T Consensus 11 l~gkrvLViGgG-~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGGG-EVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEES-HHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCC
Confidence 467999999995 69999999999999999999754
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=93.37 E-value=0.075 Score=42.76 Aligned_cols=82 Identities=17% Similarity=0.186 Sum_probs=59.3
Q ss_pred CCeEE-EEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 12 TCRWF-SVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 12 ~k~vl-ITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
+.+++ +|-|+||.-+++.+.+ . +.+|+.++++++.++.+.+.++. .+.++.++..+.++.
T Consensus 24 ~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-----------------~~~r~~~~~~~f~~~ 84 (192)
T d1m6ya2 24 EKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-----------------FSDRVSLFKVSYREA 84 (192)
T ss_dssp TCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-----------------GTTTEEEEECCGGGH
T ss_pred CCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-----------------ccccccchhHHHhhH
Confidence 34444 7888899989988876 3 46899999999998877666544 345788999888765
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
..+ .+.. ..+.+|.++...|+.
T Consensus 85 ~~~---~~~~--~~~~vdgIl~DlGvS 106 (192)
T d1m6ya2 85 DFL---LKTL--GIEKVDGILMDLGVS 106 (192)
T ss_dssp HHH---HHHT--TCSCEEEEEEECSCC
T ss_pred HHH---HHHc--CCCCcceeeeccchh
Confidence 433 2221 135899999999984
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=93.26 E-value=0.11 Score=38.77 Aligned_cols=73 Identities=12% Similarity=0.216 Sum_probs=54.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD 92 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 92 (347)
++.|.|++|-+|+++++.+.+.|++++.. +++.... + ...+ +..|+|.++.
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~-------------------~~~D---VvIDFS~p~~ 53 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L-------------------DSPD---VVIDFSSPEA 53 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C-------------------SCCS---EEEECSCGGG
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h-------------------ccCC---EEEEecCHHH
Confidence 48999999999999999999999987654 4432210 0 1122 4669999999
Q ss_pred HHHHHHHHHhhcCCccEEEEcCCC
Q 019009 93 VQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 93 v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
+.+.++...+. ++-+++-..|.
T Consensus 54 ~~~~l~~~~~~--~~p~ViGTTG~ 75 (128)
T d1vm6a3 54 LPKTVDLCKKY--RAGLVLGTTAL 75 (128)
T ss_dssp HHHHHHHHHHH--TCEEEECCCSC
T ss_pred HHHHHHHHHhc--CCCEEEEcCCC
Confidence 99999988776 56777766654
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.20 E-value=0.17 Score=39.70 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=33.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 019009 9 WSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS 45 (347)
Q Consensus 9 ~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~ 45 (347)
...||+++|.|-|.=+|+-+|..|+++|++|.++.++
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~ 62 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 62 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence 3458999999999999999999999999999988764
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.14 E-value=0.15 Score=42.10 Aligned_cols=74 Identities=9% Similarity=-0.004 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+++||=.|++.|. ++..|+++|.+|+.++.+++.++.+.+.+.. .+.++.++..|+.+.
T Consensus 37 ~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~-----------------~~~~v~~~~~d~~~~ 96 (246)
T d1y8ca_ 37 VFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRS-----------------QGLKPRLACQDISNL 96 (246)
T ss_dssp CTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHH-----------------TTCCCEEECCCGGGC
T ss_pred CCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccc-----------------cCccceeeccchhhh
Confidence 35789999998885 7888999999999999999988777665544 345678888888654
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
+ ..+++|++++..+
T Consensus 97 ~-----------~~~~fD~i~~~~~ 110 (246)
T d1y8ca_ 97 N-----------INRKFDLITCCLD 110 (246)
T ss_dssp C-----------CSCCEEEEEECTT
T ss_pred c-----------ccccccccceeee
Confidence 2 1247899887543
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.08 E-value=0.4 Score=38.40 Aligned_cols=73 Identities=25% Similarity=0.211 Sum_probs=50.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.|++||=-|++.|. ++..++.+|+ +|+.++.+++.++.+.+.++. .+.+..++..|+.+
T Consensus 46 ~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~-----------------~~~~~~~~~~d~~~ 105 (201)
T d1wy7a1 46 EGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGE-----------------FKGKFKVFIGDVSE 105 (201)
T ss_dssp TTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGG-----------------GTTSEEEEESCGGG
T ss_pred CCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHH-----------------cCCCceEEECchhh
Confidence 47899988876662 2334457785 899999999887766554433 33566777888643
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
. .+++|++|.|.-+
T Consensus 106 ~-------------~~~fD~Vi~nPP~ 119 (201)
T d1wy7a1 106 F-------------NSRVDIVIMNPPF 119 (201)
T ss_dssp C-------------CCCCSEEEECCCC
T ss_pred h-------------CCcCcEEEEcCcc
Confidence 2 3579999999865
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.07 E-value=0.55 Score=36.48 Aligned_cols=35 Identities=0% Similarity=-0.133 Sum_probs=25.1
Q ss_pred eEEEEcC-CChHHHHHHHHHHHCC----CeEEEEeCChhH
Q 019009 14 RWFSVVS-TRGLGKALAREFLLSG----DRVVVASRSSES 48 (347)
Q Consensus 14 ~vlITGa-s~GIG~aiA~~la~~G----~~Vil~~R~~~~ 48 (347)
.+.|.|| |.|.+.+++..++..- .++++.+.++++
T Consensus 3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~ 42 (169)
T d1s6ya1 3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK 42 (169)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence 4667776 5677777777666532 489999998865
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.05 E-value=0.089 Score=47.77 Aligned_cols=33 Identities=30% Similarity=0.500 Sum_probs=28.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
+.+|||.|+ ||||.++++.|+..|. ++.+++.+
T Consensus 37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D 70 (426)
T d1yovb1 37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD 70 (426)
T ss_dssp HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence 357999998 5799999999999997 79998763
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.92 E-value=0.43 Score=38.14 Aligned_cols=76 Identities=16% Similarity=-0.002 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
.+.+||=.|++.|. ++..|++.|++|+.++.+++.++.+.+...+ .+..+..+..|..+.
T Consensus 37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~-----------------~~~~~~~~~~d~~~l 96 (226)
T d1ve3a1 37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKS-----------------RESNVEFIVGDARKL 96 (226)
T ss_dssp SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCCEEEECCTTSC
T ss_pred CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcc-----------------ccccccccccccccc
Confidence 44678999998877 6678889999999999999888777665544 234566777787763
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
. ...+..|+++.+..+
T Consensus 97 ~----------~~~~~fD~I~~~~~l 112 (226)
T d1ve3a1 97 S----------FEDKTFDYVIFIDSI 112 (226)
T ss_dssp C----------SCTTCEEEEEEESCG
T ss_pred c----------ccCcCceEEEEecch
Confidence 2 111468999886543
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.80 E-value=0.26 Score=35.64 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.|.++|.||+ -||.++|..|++.|.+|.++.|.+.
T Consensus 22 p~~v~IiGgG-~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGGG-YIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCC-ccceeeeeeecccccEEEEEEecce
Confidence 4789999875 8999999999999999999988654
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=92.79 E-value=0.31 Score=40.27 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=28.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~ 45 (347)
.++|+|.|+ ||+|..+++.|++.|. ++++++.+
T Consensus 30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence 479999995 6899999999999996 79998753
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=92.68 E-value=0.089 Score=41.17 Aligned_cols=41 Identities=20% Similarity=0.299 Sum_probs=36.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
.||+++|.|-|.=+|+-++..|.++|++|+++.+....+++
T Consensus 36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~ 76 (166)
T d1b0aa1 36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH 76 (166)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred ccceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence 47999999999999999999999999999999776655443
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=92.58 E-value=0.082 Score=43.38 Aligned_cols=35 Identities=20% Similarity=0.082 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
..|.|+|.||+ =.|+++|..|+++|++|.++.|+.
T Consensus 5 ~~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGSG-VIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34689999875 789999999999999999999864
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.57 E-value=0.067 Score=42.43 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=32.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~ 58 (347)
+|.|.|+ |-.|.++|..|++.|.+|.+.+|+.+. +..+.+++
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~ 43 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA 43 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence 4567776 589999999999999999999996553 34455544
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=92.54 E-value=0.36 Score=40.31 Aligned_cols=74 Identities=12% Similarity=0.089 Sum_probs=52.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..|++||=.|+++|+ ++..+++.|++|+.++.++..++.+.+..+. .+.+..++..|+.+
T Consensus 119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~-----------------n~~~~~~~~~d~~~ 178 (254)
T d2nxca1 119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKR-----------------NGVRPRFLEGSLEA 178 (254)
T ss_dssp CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHH-----------------TTCCCEEEESCHHH
T ss_pred CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHH-----------------cCCceeEEeccccc
Confidence 467999999999886 3345678899999999999998877766654 23345566666421
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
. -..++.|+++.|-
T Consensus 179 ----------~-~~~~~fD~V~ani 192 (254)
T d2nxca1 179 ----------A-LPFGPFDLLVANL 192 (254)
T ss_dssp ----------H-GGGCCEEEEEEEC
T ss_pred ----------c-ccccccchhhhcc
Confidence 1 1235899998773
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.52 E-value=0.15 Score=39.70 Aligned_cols=40 Identities=15% Similarity=0.039 Sum_probs=35.1
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES 48 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~ 48 (347)
.+..||+++|.|-. -||+.+|+.+...|++|+++..++-+
T Consensus 20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~ 59 (163)
T d1li4a1 20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN 59 (163)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred ceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence 34568999999854 79999999999999999999999865
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=92.44 E-value=0.31 Score=38.49 Aligned_cols=40 Identities=10% Similarity=-0.052 Sum_probs=33.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV 53 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~ 53 (347)
-.|+|.||. -.|++-++.....|++|.+.+.++++++++.
T Consensus 30 a~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~ 69 (183)
T d1l7da1 30 ARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVE 69 (183)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred cEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence 467888864 6899999999999999999999998876543
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=92.36 E-value=0.22 Score=43.22 Aligned_cols=116 Identities=16% Similarity=0.129 Sum_probs=68.8
Q ss_pred CCCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGa-s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.|++||=.++ +||++.+ ++..|.+|+.++.++..++.+.+.++.+. -.++.++..|..+
T Consensus 145 ~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ng----------------l~~~~~i~~d~~~ 204 (318)
T d1wxxa2 145 RGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNG----------------LGNVRVLEANAFD 204 (318)
T ss_dssp CEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTT----------------CTTEEEEESCHHH
T ss_pred CCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcC----------------CCCcceeeccHHH
Confidence 4688887765 5555443 34456799999999999887777665521 1356778877643
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
+.+.......+.|++|.+.-.... . ....... ......+.+.+++.++ .+|.++..|
T Consensus 205 ------~~~~~~~~~~~fD~Vi~DpP~~~~-~---~~~~~~~-------~~~~~~l~~~a~~lLk---pGG~Lv~~s 261 (318)
T d1wxxa2 205 ------LLRRLEKEGERFDLVVLDPPAFAK-G---KKDVERA-------YRAYKEVNLRAIKLLK---EGGILATAS 261 (318)
T ss_dssp ------HHHHHHHTTCCEEEEEECCCCSCC-S---TTSHHHH-------HHHHHHHHHHHHHTEE---EEEEEEEEE
T ss_pred ------HhhhhHhhhcCCCEEEEcCCcccc-c---hHHHHHH-------HHHHHHHHHHHHHHcC---CCCEEEEEe
Confidence 222333333579999999854321 1 1111111 1123346666777665 367666654
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.34 E-value=0.25 Score=36.26 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.|+++|.||+ -||.++|..|++.|.+|.++.|++
T Consensus 23 p~~~vIiG~G-~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGGG-IIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCC-chHHHHHHHHHhhCcceeEEEecc
Confidence 3789999875 799999999999999999998865
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=92.34 E-value=0.044 Score=45.48 Aligned_cols=44 Identities=18% Similarity=0.138 Sum_probs=37.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT 54 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~ 54 (347)
..||+++|-|- +-+|..+|+.|.+.|++|++++.+...++....
T Consensus 37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~ 80 (230)
T d1leha1 37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA 80 (230)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH
Confidence 35799999885 579999999999999999999999887765544
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.29 E-value=0.11 Score=38.26 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.+|+++|.||+ -+|.++|..|++.|.+|.++.|.+
T Consensus 29 ~~k~vvViGgG-~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIGSG-YIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCh-HHHHHHHHHhhccceEEEEEEecC
Confidence 46788888765 999999999999999999998864
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.29 E-value=0.08 Score=41.65 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=36.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVR 50 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~ 50 (347)
.||+++|.|-|.=+|+-+|..|+++|++|.++.++...+.
T Consensus 38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~ 77 (170)
T d1a4ia1 38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD 77 (170)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred ccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence 5799999999999999999999999999999988766554
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.23 E-value=0.6 Score=36.81 Aligned_cols=38 Identities=16% Similarity=-0.003 Sum_probs=32.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSES 48 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~ 48 (347)
..||++.|.| .+.||+++|+.+..-|++|+..++...+
T Consensus 42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~ 79 (184)
T d1ygya1 42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP 79 (184)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence 3578988888 5689999999999999999999987554
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.14 E-value=0.3 Score=35.92 Aligned_cols=34 Identities=15% Similarity=0.068 Sum_probs=30.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.|+++|.||+ -||.++|..|++.|.+|.++.|.+
T Consensus 22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence 3789999976 699999999999999999999864
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=92.12 E-value=0.1 Score=38.49 Aligned_cols=37 Identities=19% Similarity=0.137 Sum_probs=32.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
..+|+++|.||+ -+|.++|..|+++|.+|.++.|.+.
T Consensus 28 ~~~~~vvIIGgG-~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 28 RPQSRLLIVGGG-VIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp CTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred hcCCeEEEECcc-hhHHHHHHHhhcccceEEEEeeccc
Confidence 446889888865 8999999999999999999998754
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=91.97 E-value=0.36 Score=38.66 Aligned_cols=36 Identities=11% Similarity=-0.037 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.||++.|.|-+ .||+.+|+.|..-|++|+..++...
T Consensus 42 ~gk~vgIiG~G-~IG~~va~~l~~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 42 RDQVVGVVGTG-HIGQVFMQIMEGFGAKVITYDIFRN 77 (197)
T ss_dssp GGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCCeEEEeccc-ccchhHHHhHhhhcccccccCcccc
Confidence 47999999864 7999999999999999999987654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=91.88 E-value=0.35 Score=35.10 Aligned_cols=35 Identities=14% Similarity=-0.065 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
..|+++|.||+ -||.++|..|++.|.+|.++.|..
T Consensus 21 ~p~~v~IiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 21 ESKKIGIVGSG-YIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCCEEEEECCc-hHHHHHHHHHHhccccceeeehhc
Confidence 35788998875 899999999999999999999854
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.84 E-value=0.72 Score=39.80 Aligned_cols=119 Identities=13% Similarity=0.135 Sum_probs=71.5
Q ss_pred cCCCeEEEEcC-CChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVS-TRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGa-s~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
+.|++||=.|+ +|+++.++ +..|+ +|+.++.+++.++.+.+.++.+. ...++.++..|+
T Consensus 144 ~~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ng---------------l~~~~~~~~~d~ 204 (324)
T d2as0a2 144 QPGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNG---------------VEDRMKFIVGSA 204 (324)
T ss_dssp CTTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTT---------------CGGGEEEEESCH
T ss_pred CCCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcC---------------CCccceeeechh
Confidence 45789987775 45555543 45676 79999999998887777665531 224567777775
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG 167 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS 167 (347)
.+ ..........+.|++|.++-.... . ..+.... ......+.+.+++.++ .+|.++..|.
T Consensus 205 ~~------~~~~~~~~~~~fD~Vi~DpP~~~~-~------~~~~~~~----~~~y~~l~~~a~~ll~---pGG~lv~~s~ 264 (324)
T d2as0a2 205 FE------EMEKLQKKGEKFDIVVLDPPAFVQ-H------EKDLKAG----LRAYFNVNFAGLNLVK---DGGILVTCSC 264 (324)
T ss_dssp HH------HHHHHHHTTCCEEEEEECCCCSCS-S------GGGHHHH----HHHHHHHHHHHHTTEE---EEEEEEEEEC
T ss_pred hh------hhHHHHhccCCCCchhcCCccccC-C------HHHHHHH----HHHHHHHHHHHHHHcC---CCcEEEEEeC
Confidence 32 233333344579999998854321 1 1111221 1133446666777765 3677777653
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=91.83 E-value=0.84 Score=32.88 Aligned_cols=82 Identities=12% Similarity=0.019 Sum_probs=56.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
||+|||.=-..-+-..+...|.+.|++|+..+.+... +.+.+++. ...+..+..++-+.+
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~-----------------~~dliilD~~mp~~~ 60 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKEL-----------------KPDIVTMDITMPEMN 60 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHH-----------------CCSEEEEECSCGGGC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhc-----------------cCCEEEEecCCCCCC
Confidence 7899999999999999999999999999877766543 33444442 234555555554443
Q ss_pred HHHHHHHHHHhhcCCccEEEEcC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nA 114 (347)
. -++++++++....+-+++..+
T Consensus 61 G-~e~~~~ir~~~~~~pvi~ls~ 82 (118)
T d1u0sy_ 61 G-IDAIKEIMKIDPNAKIIVCSA 82 (118)
T ss_dssp H-HHHHHHHHHHCTTCCEEEEEC
T ss_pred H-HHHHHHHHHhCCCCcEEEEEc
Confidence 3 355666777766777777654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=91.82 E-value=0.3 Score=35.38 Aligned_cols=34 Identities=15% Similarity=-0.041 Sum_probs=29.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.|+++|.||+ -+|.++|..|++.|.+|.++.|.+
T Consensus 21 p~~vvIiGgG-~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGAG-YIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCC-hhhHHHHHHhhccccEEEEEeecc
Confidence 3778888765 899999999999999999998865
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.66 E-value=0.46 Score=38.62 Aligned_cols=44 Identities=20% Similarity=0.123 Sum_probs=36.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l 56 (347)
..+++||..|++.| ..+..|+++|++|+.++-++..++.+.++.
T Consensus 44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~ 87 (229)
T d2bzga1 44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ 87 (229)
T ss_dssp CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence 35689999999877 457888999999999999998877665543
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=91.38 E-value=0.13 Score=39.33 Aligned_cols=36 Identities=14% Similarity=0.059 Sum_probs=29.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRM 51 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~ 51 (347)
|-|.| .|-+|.++|+.|+++|++|++.+|++.+...
T Consensus 3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~ 38 (152)
T d1i36a2 3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTI 38 (152)
T ss_dssp EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence 44554 5899999999999999999999887765543
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=91.37 E-value=0.69 Score=36.23 Aligned_cols=78 Identities=19% Similarity=0.128 Sum_probs=54.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..|.+||=.|+++| .++..|++.+.+|+.++.+++.++.+.+.+++.. ...++.++..|..
T Consensus 32 ~~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~g---------------l~~~v~~~~gda~- 92 (186)
T d1l3ia_ 32 GKNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHG---------------LGDNVTLMEGDAP- 92 (186)
T ss_dssp CTTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTT---------------CCTTEEEEESCHH-
T ss_pred CCCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcC---------------CCcceEEEECchh-
Confidence 35678888887776 3345566778899999999999988887776631 2246788888742
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
+.......+|.++.+.+
T Consensus 93 ---------~~~~~~~~~D~v~~~~~ 109 (186)
T d1l3ia_ 93 ---------EALCKIPDIDIAVVGGS 109 (186)
T ss_dssp ---------HHHTTSCCEEEEEESCC
T ss_pred ---------hcccccCCcCEEEEeCc
Confidence 12233457899987653
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.07 E-value=1.1 Score=33.44 Aligned_cols=85 Identities=12% Similarity=0.037 Sum_probs=54.7
Q ss_pred CCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEeCChhHHHH--HHHHHHHHhhhhhhhcCCCCcccccCceeeEEecC
Q 019009 12 TCRWFSVVST---RGLGKALAREFLLSGDRVVVASRSSESVRM--TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD 86 (347)
Q Consensus 12 ~k~vlITGas---~GIG~aiA~~la~~G~~Vil~~R~~~~l~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 86 (347)
-|+|.|.||| +-.|..+++.|.+.|++|+.+..+.+.... ....+.+ ....+..+. =
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~d-----------------lp~~iD~v~-i 80 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLD-----------------IPDKIEVVD-L 80 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-----------------CSSCCSEEE-E
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccc-----------------cCccceEEE-E
Confidence 4899999999 579999999999999999999765432110 0000000 011111111 1
Q ss_pred CCCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 87 VCEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 87 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
...++.+.++++++.+. ++..++...|.
T Consensus 81 ~vp~~~~~~~~~e~~~~--g~k~v~~~~G~ 108 (139)
T d2d59a1 81 FVKPKLTMEYVEQAIKK--GAKVVWFQYNT 108 (139)
T ss_dssp CSCHHHHHHHHHHHHHH--TCSEEEECTTC
T ss_pred EeCHHHHHHHHHHHHHh--CCCEEEEeccc
Confidence 24577888888888776 57788777775
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=90.93 E-value=0.57 Score=33.96 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.|.++|.||+ -||.++|..|++.|.+|.++.|..
T Consensus 22 p~~i~IiG~G-~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 22 PGKLGVIGAG-VIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCC-hHHHHHHHHHHHcCCceEEEEeec
Confidence 4789999875 899999999999999999998754
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=90.91 E-value=0.21 Score=40.17 Aligned_cols=69 Identities=22% Similarity=0.230 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||+||=.|+++|+ ++..++..|+ +|+.++.+++.++.+.+. -.++.++.+|+.+
T Consensus 48 ~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N---------------------~~~~~~~~~D~~~ 103 (197)
T d1ne2a_ 48 GGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN---------------------CGGVNFMVADVSE 103 (197)
T ss_dssp BTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH---------------------CTTSEEEECCGGG
T ss_pred CCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc---------------------cccccEEEEehhh
Confidence 37999999988873 3345677885 699999998876543321 1346778888854
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
. .+++|++|.|.-+
T Consensus 104 l-------------~~~fD~Vi~NPPf 117 (197)
T d1ne2a_ 104 I-------------SGKYDTWIMNPPF 117 (197)
T ss_dssp C-------------CCCEEEEEECCCC
T ss_pred c-------------CCcceEEEeCccc
Confidence 2 2579999998743
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.83 E-value=0.15 Score=40.95 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=30.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMT 52 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~ 52 (347)
+.|. |.|-+|+.+|..|++.|++|++.+.|+++.++.
T Consensus 3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l 39 (202)
T d1mv8a2 3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI 39 (202)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence 4555 566899999999999999999999998765443
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=90.78 E-value=0.52 Score=38.04 Aligned_cols=81 Identities=17% Similarity=0.129 Sum_probs=56.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..|.+||-.|+++|--.++..++.....+|+.+..+++.++.+.+.++.. .-.++.++..|..+
T Consensus 74 ~~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~----------------~~~n~~~~~~d~~~ 137 (213)
T d1dl5a1 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL----------------GIENVIFVCGDGYY 137 (213)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEESCGGG
T ss_pred cccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh----------------cccccccccCchHH
Confidence 56789999998887766655555555679999999999888887777652 12356666666543
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
. ....+..|.++.+++.
T Consensus 138 ~----------~~~~~~fD~I~~~~~~ 154 (213)
T d1dl5a1 138 G----------VPEFSPYDVIFVTVGV 154 (213)
T ss_dssp C----------CGGGCCEEEEEECSBB
T ss_pred c----------cccccchhhhhhhccH
Confidence 1 1122578999988865
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=90.76 E-value=3 Score=32.76 Aligned_cols=95 Identities=8% Similarity=0.088 Sum_probs=52.1
Q ss_pred hhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEcCCCCCCCCCCCcchh
Q 019009 102 NEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 181 (347)
Q Consensus 102 ~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vsS~~~~~~~~~~~~~Y 181 (347)
...+.++.+|+-.+.... .....+ ... ..+...+.++|++.. .....++.+++... ....+....-
T Consensus 73 ~~~~~~~~vv~l~~~~~~--~~~~~~--~~~----~~~~~~l~l~qal~~----~~~~~~l~~vT~~a--~~~~~~d~~~ 138 (209)
T d2fr1a2 73 RSVGEVAGVLSLLAVDEA--EPEEAP--LAL----ASLADTLSLVQAMVS----AELGCPLWTVTESA--VATGPFERVR 138 (209)
T ss_dssp TTSCCCSEEEECTTTTCC--CCSSCG--GGC----HHHHHHHHHHHHHHH----TTCCCCEEEEEESC--SCSSTTSCCS
T ss_pred hccCCCCeEEEeCCCCCC--CCcchh--HHH----HHHHHHHHHHHHHHh----CCCCCcEEEEEcCC--cccCCCcccC
Confidence 344678888887765331 111111 111 123445556666543 22345677776431 1112222334
Q ss_pred hhHHHHHHHHHHHHHhHhcCCCeEEEEee
Q 019009 182 GSTKCGLRQLQASLFKESKRSKVGVHTAS 210 (347)
Q Consensus 182 ~asKaal~~~~~~La~el~~~gI~v~~i~ 210 (347)
....+++-+|.|+++.|+....+++..+.
T Consensus 139 ~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~ 167 (209)
T d2fr1a2 139 NAAHGALWGVGRVIALENPAVWGGLVDVP 167 (209)
T ss_dssp CGGGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred CHhHHhHHHHHHHHHHhCCCceEEEEECC
Confidence 56788999999999999876545555543
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.69 E-value=0.48 Score=34.59 Aligned_cols=33 Identities=21% Similarity=0.024 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRS 45 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~ 45 (347)
.|.++|.||+ -||.++|..|.+.|.+|.++.|+
T Consensus 20 P~~vvIIGgG-~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGAS-YVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSEEEECCS-HHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCC-ccHHHHHHHHhhcCCeEEEEEec
Confidence 3678888875 89999999999999999999886
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=90.66 E-value=0.16 Score=37.25 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
+|.++|.||+ -+|.++|..|++.|.+|.++.|.+.
T Consensus 32 ~~~vvIiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGGG-FIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEECS-HHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECCc-HHHHHHHHHhhcccceEEEEecccc
Confidence 4788888865 8999999999999999999988653
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.60 E-value=0.41 Score=39.12 Aligned_cols=73 Identities=21% Similarity=0.086 Sum_probs=54.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP 90 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 90 (347)
..++||=.|++.| .++..|+++|++|+.++-+++.++.+.+.+.+ .+.++.++..|+.+.
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~-----------------~~~~i~~~~~d~~~l 100 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKE-----------------RNLKIEFLQGDVLEI 100 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCCEEEESCGGGC
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccc-----------------ccccchheehhhhhc
Confidence 4578999998876 45677899999999999999888777666654 345688889988664
Q ss_pred HHHHHHHHHHHhhcCCccEEEEcC
Q 019009 91 ADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 91 ~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
.- .+..|.+++.-
T Consensus 101 ~~-----------~~~fD~I~~~~ 113 (251)
T d1wzna1 101 AF-----------KNEFDAVTMFF 113 (251)
T ss_dssp CC-----------CSCEEEEEECS
T ss_pred cc-----------ccccchHhhhh
Confidence 21 13689888753
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=90.56 E-value=0.53 Score=38.20 Aligned_cols=80 Identities=23% Similarity=0.170 Sum_probs=59.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..|.+||..|+++|--.++.-++. |.+|+.+.++++-.+.+.+.+++. .-.++.++..|..+
T Consensus 77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~----------------g~~nv~~~~gd~~~ 138 (215)
T d1jg1a_ 77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA----------------GVKNVHVILGDGSK 138 (215)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEESCGGG
T ss_pred CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc----------------CCceeEEEECcccc
Confidence 457899999999988888877776 567999999988777776666652 22578888888754
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
. ....++.|.++.+++..
T Consensus 139 g----------~~~~~pfD~Iiv~~a~~ 156 (215)
T d1jg1a_ 139 G----------FPPKAPYDVIIVTAGAP 156 (215)
T ss_dssp C----------CGGGCCEEEEEECSBBS
T ss_pred C----------CcccCcceeEEeecccc
Confidence 1 12336899999888763
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=90.43 E-value=0.27 Score=36.10 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=31.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.|+++|.||+ -||.++|..|++.|.+|.++.|++.
T Consensus 25 p~~~viiG~G-~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIGAG-YIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp CSEEEESCCS-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEccc-hHHHHHHHHHHhcCCeEEEEEEccc
Confidence 4788999875 8999999999999999999998654
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.29 E-value=0.13 Score=40.38 Aligned_cols=36 Identities=6% Similarity=-0.048 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDR-VVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~-Vil~~R~~~ 47 (347)
.+|+|+|.||+ -.|...|..|+++|++ |.+..|+..
T Consensus 3 ~~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGAG-PASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 36899999975 7999999999999985 989888654
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=90.00 E-value=0.15 Score=42.29 Aligned_cols=34 Identities=21% Similarity=0.087 Sum_probs=29.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
+|+|+|.||+ -=|++.|..|+++|++|.++.+++
T Consensus 1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5889999865 568999999999999999997653
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=89.86 E-value=5.1 Score=33.99 Aligned_cols=119 Identities=15% Similarity=0.132 Sum_probs=69.2
Q ss_pred cCCCeEEEEcC-CChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVS-TRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGa-s~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..|++||=..+ +||++.+ ++..|+ +|+.++.++..++.+.+.++.+.- ...++.++..|+
T Consensus 143 ~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l--------------~~~~~~~i~~d~ 204 (317)
T d2b78a2 143 AAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHL--------------DMANHQLVVMDV 204 (317)
T ss_dssp TBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTC--------------CCTTEEEEESCH
T ss_pred hCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcc--------------cCcceEEEEccH
Confidence 46888886665 5555533 456787 699999999988877766654311 124577888876
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhHcCCCCcEEEEEc
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD 166 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~g~Iv~vs 166 (347)
- ..++...++..+.|++|.+.-.... .+-...+. ......+.+.+++.++ ++|.+++.|
T Consensus 205 ~------~~l~~~~~~~~~fD~Ii~DPP~f~~-~~~~~~~~----------~~~~~~L~~~a~~ll~---pgG~l~~~s 263 (317)
T d2b78a2 205 F------DYFKYARRHHLTYDIIIIDPPSFAR-NKKEVFSV----------SKDYHKLIRQGLEILS---ENGLIIAST 263 (317)
T ss_dssp H------HHHHHHHHTTCCEEEEEECCCCC------CCCCH----------HHHHHHHHHHHHHTEE---EEEEEEEEE
T ss_pred H------HHHHHHHhhcCCCCEEEEcChhhcc-chhHHHHH----------HHHHHHHHHHHHHHcC---CCCEEEEEe
Confidence 3 2333444454579999998743221 11111111 1123346677777775 356565544
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=89.71 E-value=0.98 Score=37.90 Aligned_cols=79 Identities=22% Similarity=0.247 Sum_probs=53.1
Q ss_pred CeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 13 CRWFSVVSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 13 k~vlITGas~G-IG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
++++-.|+++| |+.+++ + ...++|+.++.+++.++-+.+..+... ...++..+..|+.+.
T Consensus 112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~---------------~~~~~~i~~~~~~~~- 172 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHG---------------VSDRFFVRKGEFLEP- 172 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTT---------------CTTSEEEEESSTTGG-
T ss_pred cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcC---------------CCceeEEeecccccc-
Confidence 56666666666 454443 2 356899999999999877766655421 234567778888643
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGTNK 118 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~~~ 118 (347)
....++++|++|.|.-+..
T Consensus 173 --------~~~~~~~fDlIVsNPPYI~ 191 (271)
T d1nv8a_ 173 --------FKEKFASIEMILSNPPYVK 191 (271)
T ss_dssp --------GGGGTTTCCEEEECCCCBC
T ss_pred --------cccccCcccEEEEcccccC
Confidence 2334578999999997654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.71 E-value=0.43 Score=35.76 Aligned_cols=76 Identities=13% Similarity=0.178 Sum_probs=51.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-CCeEEE-EeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHH
Q 019009 14 RWFSVVSTRGLGKALAREFLLS-GDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA 91 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~-G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 91 (347)
+|.|.|++|-+|+++++...+. +++++. +++... +. .+.. .+.. +..|+|.++
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~----~~~~-----------------~~~D---vvIDFS~p~ 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS----LLTD-----------------GNTE---VVIDFTHPD 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH----HHHT-----------------TTCS---EEEECCCTT
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh----hhcc-----------------ccCC---EEEEcccHH
Confidence 4789999999999999987765 466554 344322 11 1111 1122 567999999
Q ss_pred HHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 92 DVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 92 ~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.+.++.+.+. ++-+||-..|.
T Consensus 56 ~~~~~~~~~~~~--~~~~ViGTTG~ 78 (135)
T d1yl7a1 56 VVMGNLEFLIDN--GIHAVVGTTGF 78 (135)
T ss_dssp THHHHHHHHHHT--TCEEEECCCCC
T ss_pred HHHHHHHHHHhc--CCCEEEecccc
Confidence 999999887765 67777755553
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=89.60 E-value=1.3 Score=35.09 Aligned_cols=37 Identities=14% Similarity=-0.112 Sum_probs=32.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
..||++.|.|.+ .||+++|+.+..-|++|+..++...
T Consensus 47 L~gktvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~ 83 (193)
T d1mx3a1 47 IRGETLGIIGLG-RVGQAVALRAKAFGFNVLFYDPYLS 83 (193)
T ss_dssp CTTCEEEEECCS-HHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred eeCceEEEeccc-cccccceeeeeccccceeeccCccc
Confidence 357999999764 7999999999999999999988644
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=89.49 E-value=0.22 Score=38.97 Aligned_cols=44 Identities=20% Similarity=0.024 Sum_probs=36.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 56 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l 56 (347)
.+|++||..|++.| ..+..|+++|++|+.++.+++.++.+.+..
T Consensus 19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~ 62 (201)
T d1pjza_ 19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTER 62 (201)
T ss_dssp CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHh
Confidence 46789999999877 377789999999999999999887765554
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=89.47 E-value=0.25 Score=35.89 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.+|.++|.||+ -||.++|..|++.|.+|.++.|.+.
T Consensus 21 ~~~~vvVvGgG-~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGGS-KTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECCC-HHHHHHHHHHHhcchhheEeeccch
Confidence 36888888865 8999999999999999999998654
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=89.41 E-value=0.17 Score=42.05 Aligned_cols=31 Identities=10% Similarity=0.049 Sum_probs=27.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
|+|.||. -.|.++|.+|+++|.+|+++.++.
T Consensus 7 vvIIGaG-i~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGGG-IIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCC
Confidence 7888764 789999999999999999999864
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.31 E-value=0.25 Score=37.67 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=30.6
Q ss_pred CCCeEEEEc-CCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVV-STRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITG-as~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.++.++|.+ +++-||.++|..|+++|.+|.++.+.+.
T Consensus 38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 456666654 5678999999999999999999998754
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=89.24 E-value=1.7 Score=32.72 Aligned_cols=77 Identities=10% Similarity=0.108 Sum_probs=50.6
Q ss_pred cCCCeEEEEcCCCh-HHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWFSVVSTRG-LGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vlITGas~G-IG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..|++||=.|+++| +|. +++.+|+ +|+.+..+++..+.+.+.++... ...++..+..|.
T Consensus 13 ~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~---------------~~~~~~ii~~D~ 73 (152)
T d2esra1 13 FNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTK---------------AENRFTLLKMEA 73 (152)
T ss_dssp CCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTT---------------CGGGEEEECSCH
T ss_pred CCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcc---------------cccchhhhcccc
Confidence 35788887775544 555 4467886 89999999988776666554321 234688888885
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
.+ +++ ...++.|+++.+.
T Consensus 74 ~~------~l~---~~~~~fDiIf~DP 91 (152)
T d2esra1 74 ER------AID---CLTGRFDLVFLDP 91 (152)
T ss_dssp HH------HHH---HBCSCEEEEEECC
T ss_pred cc------ccc---ccccccceeEech
Confidence 32 222 2335789998865
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.01 E-value=1.7 Score=37.04 Aligned_cols=75 Identities=23% Similarity=0.106 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||+||-.|++.|+ ++..+++.|+ +|+.+..++. ...+.+.++.+. ...++.++..|+.+
T Consensus 33 ~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~---------------~~~~v~~~~~~~~~ 93 (316)
T d1oria_ 33 KDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANK---------------LDHVVTIIKGKVEE 93 (316)
T ss_dssp TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTT---------------CTTTEEEEESCTTT
T ss_pred CcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhC---------------CccccceEeccHHH
Confidence 57999999998885 4566788896 6998987754 443433333321 33568888888876
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
.+. ...++|+++..-
T Consensus 94 ~~~----------~~~~~D~ivs~~ 108 (316)
T d1oria_ 94 VEL----------PVEKVDIIISEW 108 (316)
T ss_dssp CCC----------SSSCEEEEEECC
T ss_pred ccc----------ccceeEEEeeee
Confidence 431 124789998764
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.00 E-value=1.8 Score=36.98 Aligned_cols=82 Identities=12% Similarity=0.028 Sum_probs=54.0
Q ss_pred cCCCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGa-s~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
..+++||=..+ ||+++.+ ++..|++|+.++.+...++.+.+.++.+.. ...++.++..|+.
T Consensus 131 ~~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~--------------~~~~~~~i~~D~~ 192 (309)
T d2igta1 131 DRPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGL--------------EQAPIRWICEDAM 192 (309)
T ss_dssp SSCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTC--------------TTSCEEEECSCHH
T ss_pred cCCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcc--------------cCCcEEEEeCCHH
Confidence 45788886665 4444443 456899999999999988877765544311 1235778877763
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
++++...++-.+.|++|.+.-
T Consensus 193 ------~~l~~~~~~~~~fD~IilDPP 213 (309)
T d2igta1 193 ------KFIQREERRGSTYDIILTDPP 213 (309)
T ss_dssp ------HHHHHHHHHTCCBSEEEECCC
T ss_pred ------HhHHHHhhcCCCCCEEEECCC
Confidence 334444444457999999864
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=89.00 E-value=1.3 Score=33.85 Aligned_cols=39 Identities=15% Similarity=0.050 Sum_probs=24.5
Q ss_pred eEEEEcCCChHHHHHHHH--HHHC----CCeEEEEeCChhHHHHHH
Q 019009 14 RWFSVVSTRGLGKALARE--FLLS----GDRVVVASRSSESVRMTV 53 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~--la~~----G~~Vil~~R~~~~l~~~~ 53 (347)
.+.|.||++ +|...+.. +... +.+|++.+.++++++...
T Consensus 2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~ 46 (162)
T d1up7a1 2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV 46 (162)
T ss_dssp EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH
T ss_pred EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHH
Confidence 367788754 45444422 2221 468999999999887544
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=88.67 E-value=1.3 Score=34.54 Aligned_cols=80 Identities=9% Similarity=-0.001 Sum_probs=53.6
Q ss_pred cCCCeEE-EEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 10 SCTCRWF-SVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 10 ~~~k~vl-ITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
..|+++| +..|||++|.+ .+.+|+ +|+.+..+.+..+.+.+.++... ...++.++..|+
T Consensus 40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~---------------~~~~~~i~~~D~ 100 (182)
T d2fhpa1 40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITK---------------EPEKFEVRKMDA 100 (182)
T ss_dssp CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHT---------------CGGGEEEEESCH
T ss_pred cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhh---------------cccccccccccc
Confidence 3467777 44466778875 466897 69999999988877766665431 223677788776
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
. ++++.......+.|+++.+.
T Consensus 101 ~------~~l~~~~~~~~~fDlIflDP 121 (182)
T d2fhpa1 101 N------RALEQFYEEKLQFDLVLLDP 121 (182)
T ss_dssp H------HHHHHHHHTTCCEEEEEECC
T ss_pred h------hhhhhhcccCCCcceEEech
Confidence 3 23444444445789999766
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=88.60 E-value=0.63 Score=36.73 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.++++.|.|. |.||+++|+.|..-|.+|+..+|..
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d2naca1 43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR 77 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred cccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence 4689999885 5799999999999999999999864
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=88.58 E-value=0.75 Score=34.90 Aligned_cols=87 Identities=13% Similarity=0.067 Sum_probs=52.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCCHHHHH
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ 94 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~ 94 (347)
|-+.|- +-+|..+|++|++.|+.| +..|+.++.++..++...... .... . .+...+...+.+.+.+.
T Consensus 3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~-~-~~~~~~i~~~~~~~~v~ 69 (156)
T d2cvza2 3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAV---------PLER-V-AEARVIFTCLPTTREVY 69 (156)
T ss_dssp EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEEC---------CGGG-G-GGCSEEEECCSSHHHHH
T ss_pred EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCccc---------cccc-c-cceeEEEecccchhhhh
Confidence 556665 679999999999988755 678888877665554321100 0001 1 12233344566677888
Q ss_pred HHHHHHHhhcCCccEEEEcC
Q 019009 95 KLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 95 ~~~~~i~~~~g~iD~li~nA 114 (347)
...+.+.....+-.++|.+.
T Consensus 70 ~~~~~l~~~~~~~~~iid~s 89 (156)
T d2cvza2 70 EVAEALYPYLREGTYWVDAT 89 (156)
T ss_dssp HHHHHHTTTCCTTEEEEECS
T ss_pred hhhccccccccccccccccc
Confidence 77777766544455565554
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=88.57 E-value=0.32 Score=36.18 Aligned_cols=37 Identities=11% Similarity=0.095 Sum_probs=31.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
..+|+++|.||+ -+|.++|..|++.|.+|.++.+.+.
T Consensus 33 ~~~k~v~VIGgG-~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 33 IADNRLVVIGGG-YIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp CTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCEEEEECCc-hHHHHHHHHHHhhCcceeeeeeccc
Confidence 346889999764 8999999999999999999988654
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=88.39 E-value=0.24 Score=35.79 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=29.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.|+++|.|| +-+|.++|..|++.|.+|.++.|.+
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence 378888876 4899999999999999999998854
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.25 E-value=0.78 Score=39.10 Aligned_cols=76 Identities=14% Similarity=0.062 Sum_probs=51.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC 88 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls 88 (347)
.+||+||-.|++.|+ ++..+++.|+ +|+.+..++... .+.+.+.+.. ...++.++..|+.
T Consensus 34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~---------------~~~~i~~~~~~~~ 94 (311)
T d2fyta1 34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNK---------------LEDTITLIKGKIE 94 (311)
T ss_dssp TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTT---------------CTTTEEEEESCTT
T ss_pred CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhC---------------CCccceEEEeeHH
Confidence 457999999998886 5667788897 799999887543 3333333321 3356888888887
Q ss_pred CHHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 89 EPADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 89 ~~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
+... ...++|++|..-
T Consensus 95 ~l~~----------~~~~~D~Ivse~ 110 (311)
T d2fyta1 95 EVHL----------PVEKVDVIISEW 110 (311)
T ss_dssp TSCC----------SCSCEEEEEECC
T ss_pred HhcC----------ccccceEEEEee
Confidence 6421 124789998753
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=88.19 E-value=0.21 Score=41.91 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=34.5
Q ss_pred cccCCCeEEEEcCCChHHHHH-----HHHHHHCCCeEEEEeCChh
Q 019009 8 HWSCTCRWFSVVSTRGLGKAL-----AREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~ai-----A~~la~~G~~Vil~~R~~~ 47 (347)
.|..++.++|+.|=||.|+.+ |..|+++|.+|.+++-|+.
T Consensus 15 ~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 15 IARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp HHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred hhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 346678888988899999987 7899999999999999865
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=87.98 E-value=0.32 Score=38.33 Aligned_cols=36 Identities=22% Similarity=0.098 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.+|+|+|.||+ --|++.|..|+++|++|++..+++.
T Consensus 42 ~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 42 QKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccCc
Confidence 45899999975 7899999999999999999998753
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=87.70 E-value=2.1 Score=32.84 Aligned_cols=45 Identities=18% Similarity=0.274 Sum_probs=32.5
Q ss_pred cCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 019009 10 SCTCRWFSVVSTR-GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 10 ~~~k~vlITGas~-GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~ 58 (347)
..|++||=.|+++ ++| .+++.+|++|+.++.+++..+.+.+.++.
T Consensus 40 ~~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~ 85 (171)
T d1ws6a1 40 PRRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRR 85 (171)
T ss_dssp TTCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHh
Confidence 4567888666544 444 45667899999999999988777666654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=87.70 E-value=0.91 Score=34.53 Aligned_cols=45 Identities=16% Similarity=0.038 Sum_probs=33.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEE--eCChhHHHHHHHHH
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSG--DRVVVA--SRSSESVRMTVTEL 56 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G--~~Vil~--~R~~~~l~~~~~~l 56 (347)
||++.|.|+||-||..+..-+.++- ++|+.. .+|-+.+.+...+.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f 49 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF 49 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence 5889999999999999999888763 676654 45555555544443
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=87.59 E-value=0.37 Score=38.01 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=32.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
..||++.|.|.++ ||+.+|+.+..-|++|+..+|++.
T Consensus 40 l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~ 76 (181)
T d1qp8a1 40 IQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK 76 (181)
T ss_dssp CTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence 4579999999875 999999999999999999998753
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=87.40 E-value=0.55 Score=36.22 Aligned_cols=42 Identities=14% Similarity=0.024 Sum_probs=35.9
Q ss_pred CcccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHH
Q 019009 7 EHWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESV 49 (347)
Q Consensus 7 ~~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l 49 (347)
..+..||+++|.|= +-+|+.+|+.|...|++|+++..+|-+.
T Consensus 18 ~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a 59 (163)
T d1v8ba1 18 DFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA 59 (163)
T ss_dssp CCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred CceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh
Confidence 34566899999984 5799999999999999999999998653
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=87.30 E-value=0.31 Score=41.57 Aligned_cols=33 Identities=12% Similarity=-0.027 Sum_probs=29.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVAS 43 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~ 43 (347)
..||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus 34 L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 34 FGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 45799999986 6899999999999999998875
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=86.97 E-value=3.8 Score=31.85 Aligned_cols=36 Identities=11% Similarity=-0.126 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.++++.|.| .|.||+.+|+.+..-|++|+..++...
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d1sc6a1 43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK 78 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence 468999886 568999999999999999999988643
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=86.73 E-value=1.8 Score=33.89 Aligned_cols=76 Identities=11% Similarity=-0.021 Sum_probs=52.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..+++||=.|++.|. .+..|+++|++|+.++.++..++.+.+..+.. .-..+.+...|+.+
T Consensus 29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~----------------~~~~~~~~~~d~~~ 89 (198)
T d2i6ga1 29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE----------------GLDNLQTDLVDLNT 89 (198)
T ss_dssp SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------TCTTEEEEECCTTT
T ss_pred CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc----------------cccchhhhheeccc
Confidence 345689999986553 55788899999999999999887766555441 11346677778765
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAG 115 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG 115 (347)
..- -+..|+++.+.-
T Consensus 90 ~~~-----------~~~fD~I~~~~~ 104 (198)
T d2i6ga1 90 LTF-----------DGEYDFILSTVV 104 (198)
T ss_dssp CCC-----------CCCEEEEEEESC
T ss_pred ccc-----------cccccEEEEeee
Confidence 430 136899887553
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.72 E-value=1.3 Score=35.85 Aligned_cols=87 Identities=16% Similarity=0.041 Sum_probs=61.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..|.+||-.|+++|--.++..++.....+|+.+.++++.++.+.+.+++..... ....++.++..|..+
T Consensus 75 ~~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~-----------~~~~~~~~~~gD~~~ 143 (224)
T d1i1na_ 75 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTL-----------LSSGRVQLVVGDGRM 143 (224)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHH-----------HHTSSEEEEESCGGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCccc-----------ccccceEEEEeeccc
Confidence 567899999999998888888888778899999999998888777776532110 012356666677542
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
. ....+..|.++.+++..
T Consensus 144 ~----------~~~~~~fD~I~~~~~~~ 161 (224)
T d1i1na_ 144 G----------YAEEAPYDAIHVGAAAP 161 (224)
T ss_dssp C----------CGGGCCEEEEEECSBBS
T ss_pred c----------cchhhhhhhhhhhcchh
Confidence 1 11235799999988753
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=86.03 E-value=0.74 Score=32.11 Aligned_cols=38 Identities=13% Similarity=0.096 Sum_probs=29.6
Q ss_pred cCCCeEEEEcCCChHH-HHHHHHHHHCCCeEEEEeCChhH
Q 019009 10 SCTCRWFSVVSTRGLG-KALAREFLLSGDRVVVASRSSES 48 (347)
Q Consensus 10 ~~~k~vlITGas~GIG-~aiA~~la~~G~~Vil~~R~~~~ 48 (347)
...|++.+.|-. |+| .++|+.|.++|++|...++....
T Consensus 6 ~~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~ 44 (96)
T d1p3da1 6 RRVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGV 44 (96)
T ss_dssp TTCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSH
T ss_pred hhCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCCh
Confidence 345888888843 445 66899999999999999987543
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=85.97 E-value=1.3 Score=34.89 Aligned_cols=36 Identities=11% Similarity=-0.146 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.||++.|.|.+ .||+++|+.+...|.+|+..++...
T Consensus 46 ~g~tvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~ 81 (191)
T d1gdha1 46 DNKTLGIYGFG-SIGQALAKRAQGFDMDIDYFDTHRA 81 (191)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred cccceEEeecc-cchHHHHHHHHhhcccccccccccc
Confidence 47999999865 7999999999999999999987644
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=85.16 E-value=1.6 Score=34.70 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=56.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.++++||=.|++.|.- +..|+++|.+|+.++-+++.++.+.+.+... ...++.++..|..+
T Consensus 14 ~~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~----------------~~~~i~~~~~d~~~ 74 (231)
T d1vl5a_ 14 KGNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN----------------GHQQVEYVQGDAEQ 74 (231)
T ss_dssp CSCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEECCC-C
T ss_pred CCcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc----------------cccccccccccccc
Confidence 4568999999888743 4667889999999999998877665555442 22467888888876
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
.. + ..+..|+++.+..+.
T Consensus 75 l~----~------~~~~fD~v~~~~~l~ 92 (231)
T d1vl5a_ 75 MP----F------TDERFHIVTCRIAAH 92 (231)
T ss_dssp CC----S------CTTCEEEEEEESCGG
T ss_pred cc----c------ccccccccccccccc
Confidence 42 0 124789998877653
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=85.15 E-value=0.27 Score=39.24 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=27.3
Q ss_pred CeEEEEcCCChHHHH-----HHHHHHHCCCeEEEEe
Q 019009 13 CRWFSVVSTRGLGKA-----LAREFLLSGDRVVVAS 43 (347)
Q Consensus 13 k~vlITGas~GIG~a-----iA~~la~~G~~Vil~~ 43 (347)
|++.|||-+.|.|+. +|+.|+++|.+|.++.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 789999999999985 5778999999999975
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=85.11 E-value=0.46 Score=36.24 Aligned_cols=34 Identities=15% Similarity=0.078 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGD--RVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~--~Vil~~R~~ 46 (347)
||+|+|.||+ -.|.++|..|.+.|. +|+++.+++
T Consensus 2 gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 7999999986 679999999999884 788888765
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=84.97 E-value=0.47 Score=34.87 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
.|.++|.||+ -||.++|..|++.|.+|.++.|.+
T Consensus 26 p~~vvIiGgG-~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIGGG-IIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEESCS-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCC-HHHHHHHHHhhcCCCEEEEEEeec
Confidence 4789999875 899999999999999999998764
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=84.95 E-value=1.1 Score=36.49 Aligned_cols=76 Identities=14% Similarity=-0.042 Sum_probs=52.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
..|.+||-.|+++|--.+ .|++.+.+|+.+.++++..+.+.+.+. ...++.++..|...
T Consensus 69 ~~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~------------------~~~nv~~~~~d~~~ 127 (224)
T d1vbfa_ 69 HKGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS------------------YYNNIKLILGDGTL 127 (224)
T ss_dssp CTTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT------------------TCSSEEEEESCGGG
T ss_pred cccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh------------------cccccccccCchhh
Confidence 467899999998885443 456667899999999887765544332 12467788888653
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
. ....++.|.+|.+++.
T Consensus 128 g----------~~~~~pfD~Iiv~~a~ 144 (224)
T d1vbfa_ 128 G----------YEEEKPYDRVVVWATA 144 (224)
T ss_dssp C----------CGGGCCEEEEEESSBB
T ss_pred c----------chhhhhHHHHHhhcch
Confidence 1 1123679999988875
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=83.91 E-value=0.45 Score=38.38 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChHHHH-----HHHHHHHCCCeEEEEeCCh
Q 019009 12 TCRWFSVVSTRGLGKA-----LAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 12 ~k~vlITGas~GIG~a-----iA~~la~~G~~Vil~~R~~ 46 (347)
||+|.|+|+-||.|+. +|..|+++|.+|.+++-|.
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~ 41 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 6899999999999985 5778889999999998653
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=83.91 E-value=1.8 Score=36.85 Aligned_cols=33 Identities=18% Similarity=0.038 Sum_probs=25.9
Q ss_pred CCeEEEEcCCChH---HHHHHHHHHHCCCeEEEEeC
Q 019009 12 TCRWFSVVSTRGL---GKALAREFLLSGDRVVVASR 44 (347)
Q Consensus 12 ~k~vlITGas~GI---G~aiA~~la~~G~~Vil~~R 44 (347)
||+++.+|||+|= -.++|++|+++|++|++++.
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~ 36 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP 36 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4677777777542 56799999999999999874
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=83.83 E-value=0.67 Score=37.59 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=31.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
..+|.|+|.||+ --|...|..|+++|++|.++.++.+
T Consensus 47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence 356899999976 6799999999999999999987653
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=83.68 E-value=2.7 Score=33.82 Aligned_cols=87 Identities=16% Similarity=0.106 Sum_probs=58.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHH-HCC----CeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEe
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFL-LSG----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA 84 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la-~~G----~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (347)
.+|.+||..|+++|--.++..+++ ..| .+|+.+.++++..+.+.+.+........ ...++.++.
T Consensus 79 ~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~-----------~~~nv~~~~ 147 (223)
T d1r18a_ 79 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML-----------DSGQLLIVE 147 (223)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH-----------HHTSEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhc-----------CccEEEEEe
Confidence 457899999999888877777766 445 4899999999877766655543211100 113677888
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCccEEEEcCCCC
Q 019009 85 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN 117 (347)
Q Consensus 85 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~ 117 (347)
.|..+. ....++.|.++.+++..
T Consensus 148 ~d~~~~----------~~~~~~fD~Iiv~~a~~ 170 (223)
T d1r18a_ 148 GDGRKG----------YPPNAPYNAIHVGAAAP 170 (223)
T ss_dssp SCGGGC----------CGGGCSEEEEEECSCBS
T ss_pred cccccc----------cccccceeeEEEEeech
Confidence 887531 12346899999988763
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=83.60 E-value=0.56 Score=39.85 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=24.0
Q ss_pred CeEEEEcCCChHHH-----HHHHHHHHCCCeEEEEeCC
Q 019009 13 CRWFSVVSTRGLGK-----ALAREFLLSGDRVVVASRS 45 (347)
Q Consensus 13 k~vlITGas~GIG~-----aiA~~la~~G~~Vil~~R~ 45 (347)
|+|+|++|+.| |- +++++|.++|++|..++..
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 56677765545 65 6899999999999887643
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=83.33 E-value=0.61 Score=38.03 Aligned_cols=35 Identities=29% Similarity=0.075 Sum_probs=29.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.++|+|.||+ --|+.+|..|+++|.+|++..|+++
T Consensus 4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3678999875 6799999999999999999988653
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=83.33 E-value=2.3 Score=34.11 Aligned_cols=80 Identities=14% Similarity=0.018 Sum_probs=56.4
Q ss_pred cccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCC
Q 019009 8 HWSCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV 87 (347)
Q Consensus 8 ~~~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 87 (347)
.++.|.+||=.|++.|. ++..|+++|.+|+.++-++..++.+.+.+... .-.++.++..|+
T Consensus 13 ~~~~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~----------------~~~~~~~~~~d~ 73 (234)
T d1xxla_ 13 ECRAEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEK----------------GVENVRFQQGTA 73 (234)
T ss_dssp TCCTTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH----------------TCCSEEEEECBT
T ss_pred CCCCCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccc----------------cccccccccccc
Confidence 35678899999988874 44567788999999999998887766655542 124588888888
Q ss_pred CCHHHHHHHHHHHHhhcCCccEEEEcCCC
Q 019009 88 CEPADVQKLSNFAVNEFGSIDIWINNAGT 116 (347)
Q Consensus 88 s~~~~v~~~~~~i~~~~g~iD~li~nAG~ 116 (347)
.+.. + ..+.+|+++.+-.+
T Consensus 74 ~~~~----~------~~~~fD~v~~~~~l 92 (234)
T d1xxla_ 74 ESLP----F------PDDSFDIITCRYAA 92 (234)
T ss_dssp TBCC----S------CTTCEEEEEEESCG
T ss_pred cccc----c------cccccceeeeecee
Confidence 6532 0 01478988775543
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=83.32 E-value=0.52 Score=39.63 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=27.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGD-RVVVASRSS 46 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~ 46 (347)
.|+|.||+ -+|.++|.+|+++|. +|.++.|+.
T Consensus 3 dViIIGaG-i~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGAG-IVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECCS-HHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECcC-HHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 47888875 899999999999996 699998864
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.27 E-value=0.42 Score=38.54 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=30.6
Q ss_pred CCeEEEEcCCChHHHH-----HHHHHHHCCCeEEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKA-----LAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~a-----iA~~la~~G~~Vil~~R~~~ 47 (347)
+|+|.|+++-||.|+. +|..|+++|.+|.+++-|+.
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~ 41 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT 41 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 5899999999999975 56788899999999987643
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=82.89 E-value=1 Score=36.95 Aligned_cols=33 Identities=18% Similarity=0.028 Sum_probs=27.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEe
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLL-SGDRVVVAS 43 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~-~G~~Vil~~ 43 (347)
..||+++|-| .+-+|..+|+.|++ .|++|+.++
T Consensus 29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 3579999886 77899999999975 699988765
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=82.83 E-value=1.5 Score=31.34 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=27.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKALAREFLL---SGDRVVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~aiA~~la~---~G~~Vil~~R~~~ 47 (347)
.|.++|.|| |.+|.++|..|.+ +|.+|.++.|.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 478999998 6999999976655 4567999987543
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.66 E-value=0.49 Score=39.50 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=29.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 14 RWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 14 ~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.|+|.||+ =-|+.+|..|+++|.+|+++.|+++
T Consensus 4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 48999987 7899999999999999999999764
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=82.48 E-value=0.62 Score=37.20 Aligned_cols=36 Identities=11% Similarity=0.003 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChh
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~ 47 (347)
.||++.|.|.+ .||+++|+.|..-|++|+..++...
T Consensus 44 ~~ktvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~ 79 (199)
T d1dxya1 44 GQQTVGVMGTG-HIGQVAIKLFKGFGAKVIAYDPYPM 79 (199)
T ss_dssp GGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cceeeeeeecc-cccccccccccccceeeeccCCccc
Confidence 46999999865 7999999999999999999998643
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=82.32 E-value=0.62 Score=39.05 Aligned_cols=36 Identities=22% Similarity=0.059 Sum_probs=30.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
...|+|+|.||+ =-|+..|..|+++|++|++..+++
T Consensus 28 ~~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 345899999976 569999999999999999998754
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=82.02 E-value=0.64 Score=38.52 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=26.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
|+|.||. -.|..+|.+|+++|.+|+++.+..
T Consensus 6 vvIIGaG-i~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGAG-SMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCC
Confidence 6788764 679999999999999999998753
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=82.00 E-value=0.45 Score=40.21 Aligned_cols=45 Identities=16% Similarity=0.128 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 58 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~R~~~~l~~~~~~l~~ 58 (347)
.+++||=.|++.|. ++..|+++|++|+.++.+++.++.+.+....
T Consensus 56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~ 100 (292)
T d1xvaa_ 56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWN 100 (292)
T ss_dssp TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHh
Confidence 36789999987776 4666788999999999999988776665544
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.00 E-value=1.1 Score=41.53 Aligned_cols=31 Identities=10% Similarity=0.230 Sum_probs=27.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSGD-RVVVASR 44 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R 44 (347)
.+|+|.|+ +|+|.++++.|+..|. ++.+++.
T Consensus 26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~ 57 (529)
T d1yova1 26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDG 57 (529)
T ss_dssp CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence 68899987 6999999999999995 7888864
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=81.47 E-value=1.4 Score=36.56 Aligned_cols=33 Identities=12% Similarity=-0.052 Sum_probs=29.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 019009 10 SCTCRWFSVVSTRGLGKALAREFLLSGDRVVVAS 43 (347)
Q Consensus 10 ~~~k~vlITGas~GIG~aiA~~la~~G~~Vil~~ 43 (347)
..||+++|.| .+-+|..+|+.|.+.|++|+.++
T Consensus 34 l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 3579999999 67899999999999999988764
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.27 E-value=2.9 Score=35.60 Aligned_cols=75 Identities=20% Similarity=0.123 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeeEEecCCCC
Q 019009 11 CTCRWFSVVSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE 89 (347)
Q Consensus 11 ~~k~vlITGas~GIG~aiA~~la~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 89 (347)
.||+||-.|++.|+ ++..++++|+ +|+.+..++ .++.+.+.+++.. ...++.++..|+.+
T Consensus 38 ~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~---------------~~~~i~~i~~~~~~ 98 (328)
T d1g6q1_ 38 KDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNG---------------FSDKITLLRGKLED 98 (328)
T ss_dssp TTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTT---------------CTTTEEEEESCTTT
T ss_pred CcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhC---------------ccccceEEEeehhh
Confidence 57999999998874 4566778897 788888775 3443433333321 33568888888876
Q ss_pred HHHHHHHHHHHHhhcCCccEEEEcC
Q 019009 90 PADVQKLSNFAVNEFGSIDIWINNA 114 (347)
Q Consensus 90 ~~~v~~~~~~i~~~~g~iD~li~nA 114 (347)
.+ -....+|+++..-
T Consensus 99 l~----------~~~~~~D~i~se~ 113 (328)
T d1g6q1_ 99 VH----------LPFPKVDIIISEW 113 (328)
T ss_dssp SC----------CSSSCEEEEEECC
T ss_pred cc----------CcccceeEEEEEe
Confidence 42 0113689998755
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=81.05 E-value=1.5 Score=34.15 Aligned_cols=33 Identities=18% Similarity=0.010 Sum_probs=26.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCC
Q 019009 13 CRWFSVVSTRGLGKALAREFLLSG-DRVVVASRS 45 (347)
Q Consensus 13 k~vlITGas~GIG~aiA~~la~~G-~~Vil~~R~ 45 (347)
.+|.|.||||-.|.++.+.|+++- .++..+..+
T Consensus 2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 478999999999999999999876 465555433
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=80.92 E-value=0.47 Score=39.41 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=29.6
Q ss_pred CCeEEEEcCCChHHHHH-----HHHHHHCCCeEEEEeCChh
Q 019009 12 TCRWFSVVSTRGLGKAL-----AREFLLSGDRVVVASRSSE 47 (347)
Q Consensus 12 ~k~vlITGas~GIG~ai-----A~~la~~G~~Vil~~R~~~ 47 (347)
+|+|.|+| =||.|+.+ |..|++.|.+|.+++-|+.
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 57899998 88999865 5588999999999998864
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.91 E-value=0.78 Score=36.31 Aligned_cols=31 Identities=10% Similarity=0.065 Sum_probs=26.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 019009 15 WFSVVSTRGLGKALAREFLLSGDRVVVASRSS 46 (347)
Q Consensus 15 vlITGas~GIG~aiA~~la~~G~~Vil~~R~~ 46 (347)
|+|.|| |=-|+.+|..|+++|.+|.++.++.
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 688884 4679999999999999999998865
|