Query 019010
Match_columns 347
No_of_seqs 242 out of 1374
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 09:30:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019010.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019010hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c2la2 g.44.1.2 (A:225-304) S 99.6 6.5E-16 4.7E-20 118.9 5.8 67 220-286 4-72 (80)
2 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.6 5E-16 3.6E-20 118.9 4.1 68 219-286 4-73 (78)
3 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.5 2.4E-15 1.7E-19 120.8 3.1 69 219-287 17-89 (103)
4 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.5 1.1E-14 7.8E-19 115.7 6.1 71 217-288 16-87 (97)
5 d1wgma_ g.44.1.2 (A:) Ubiquiti 99.4 3.1E-14 2.2E-18 114.0 5.3 70 219-288 18-89 (98)
6 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.4 6.9E-14 5E-18 109.8 4.2 64 218-281 18-84 (86)
7 d2baya1 g.44.1.2 (A:1-56) Pre- 99.2 1.1E-12 8E-17 94.5 1.9 50 224-273 1-52 (56)
8 d1bora_ g.44.1.1 (A:) Acute pr 99.1 8E-12 5.8E-16 90.3 3.4 47 222-270 5-51 (56)
9 d1fbva4 g.44.1.1 (A:356-434) C 99.1 1.9E-11 1.4E-15 93.7 4.2 46 224-269 24-71 (79)
10 d1chca_ g.44.1.1 (A:) Immediat 99.0 7.1E-11 5.1E-15 87.8 3.5 43 225-267 7-51 (68)
11 d1g25a_ g.44.1.1 (A:) TFIIH Ma 98.9 1.2E-10 8.4E-15 86.0 2.1 51 222-272 2-59 (65)
12 d1iyma_ g.44.1.1 (A:) EL5 RING 98.8 1.2E-09 8.5E-14 78.2 4.2 48 220-267 2-54 (55)
13 d1ur6b_ g.44.1.1 (B:) Not-4 N- 98.8 7.5E-10 5.4E-14 78.2 2.5 45 224-268 1-51 (52)
14 d1v87a_ g.44.1.1 (A:) Deltex p 98.5 1.7E-08 1.2E-12 81.0 2.7 44 224-267 26-93 (114)
15 d3dplr1 g.44.1.1 (R:19-106) RI 98.4 6.9E-08 5E-12 74.6 3.0 43 225-267 23-84 (88)
16 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.2 2.5E-07 1.8E-11 66.4 2.6 47 222-268 5-59 (60)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 97.8 1.9E-06 1.4E-10 66.4 0.9 43 223-265 5-59 (94)
18 d2jnea1 g.41.18.1 (A:1-71) Hyp 78.5 0.094 6.8E-06 38.3 -1.8 41 223-267 2-42 (71)
19 d2cs3a1 g.44.1.3 (A:8-87) Prot 68.5 1.4 0.0001 32.0 2.5 34 222-255 7-44 (80)
20 d1wila_ g.50.1.3 (A:) Hypothet 54.0 4.5 0.00033 30.0 3.1 44 221-265 13-76 (89)
21 d1wepa_ g.50.1.2 (A:) PHD fing 48.8 6.1 0.00044 28.0 3.2 43 224-267 13-65 (79)
22 d1weoa_ g.44.1.1 (A:) Cellulos 46.3 7.9 0.00058 28.8 3.4 44 224-267 17-69 (93)
23 d1ibia2 g.39.1.3 (A:145-175) C 42.8 2.5 0.00018 25.4 0.1 29 224-252 1-30 (31)
24 d1wd2a_ g.44.1.1 (A:) Ariadne- 41.2 4.4 0.00032 27.8 1.2 30 225-254 8-45 (60)
25 d1f62a_ g.50.1.2 (A:) Williams 41.2 5.6 0.0004 25.7 1.7 41 225-265 2-50 (51)
26 d2epqa1 g.37.1.1 (A:380-411) P 40.6 3.2 0.00023 24.9 0.3 10 224-233 4-13 (32)
27 d1joca1 g.50.1.1 (A:1348-1411) 37.8 7.6 0.00056 26.6 2.1 32 222-253 7-42 (64)
28 d1z60a1 g.49.1.2 (A:328-386) T 34.9 7.9 0.00058 26.7 1.7 40 223-262 15-58 (59)
29 d1y02a2 g.50.1.1 (A:20-70) Rif 34.2 2.3 0.00017 28.4 -1.2 38 225-262 2-44 (51)
30 d2dlqa3 g.37.1.1 (A:63-92) GLI 30.8 6.1 0.00045 23.3 0.4 17 221-237 2-18 (30)
31 d1dvpa2 g.50.1.1 (A:149-220) H 30.1 13 0.00092 26.0 2.2 29 225-253 15-47 (72)
32 d2o35a1 a.293.1.1 (A:2-80) Hyp 29.9 6.2 0.00045 28.7 0.4 12 244-255 39-50 (79)
33 d2ct7a1 g.44.1.4 (A:8-80) Ring 29.3 8.3 0.0006 26.9 1.1 32 222-253 17-54 (73)
34 d1zbdb_ g.50.1.1 (B:) Effector 29.3 8.8 0.00064 29.4 1.3 28 224-251 49-81 (124)
35 d1weva_ g.50.1.2 (A:) PHD fing 27.0 6.8 0.0005 28.0 0.2 44 221-264 14-71 (88)
36 d1p91a_ c.66.1.33 (A:) rRNA me 26.9 7.5 0.00055 33.1 0.5 22 224-245 2-26 (268)
37 d2d8xa1 g.39.1.3 (A:33-64) Pin 26.1 10 0.00073 22.9 0.8 28 225-252 1-29 (32)
38 d2fiya1 e.59.1.1 (A:19-308) Fd 25.3 7.5 0.00055 34.5 0.2 42 224-265 165-213 (290)
39 d1vfya_ g.50.1.1 (A:) vps27p p 23.6 16 0.0011 25.1 1.6 29 225-253 7-39 (67)
40 d1mm2a_ g.50.1.2 (A:) Mi2-beta 21.8 33 0.0024 22.6 3.1 39 225-265 11-56 (61)
41 d1nnqa2 g.41.5.1 (A:135-171) R 21.0 17 0.0012 22.6 1.2 9 257-265 21-29 (37)
42 d1we9a_ g.50.1.2 (A:) PHD fing 20.7 11 0.00083 25.2 0.3 42 224-265 7-58 (64)
43 d2fj8a1 g.3.13.1 (A:64-122) Bo 20.3 16 0.0011 25.1 1.0 18 20-38 41-58 (59)
No 1
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=6.5e-16 Score=118.93 Aligned_cols=67 Identities=18% Similarity=0.397 Sum_probs=61.1
Q ss_pred cccccccccccCCcCCCeecCCCCccccccHHhhhc--cCCCCCCCCCCcCCCCcccHHHHHHHHHHHH
Q 019010 220 LRAILSDPVTGNLMDDAMILPCGHSFGAAGVQHVIR--MKACYTCSRPVLEDSIAPNLSLRAAVQAFRR 286 (347)
Q Consensus 220 L~e~L~CPIClell~dPVtl~CGHsFC~~CL~~~le--~~~CP~Cr~~v~~~~l~pN~~L~~LVe~~k~ 286 (347)
+.+.|.||||+++|.+||+++|||+||+.||.+|+. ...||.|+.++....+.+|..|+.+|+.+..
T Consensus 4 iP~~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~~l~pN~~L~~~I~~~l~ 72 (80)
T d2c2la2 4 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFIS 72 (80)
T ss_dssp CCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHHHHHT
T ss_pred CCccccCcCcCchhhhhcccCCcCeecHHHHHHHHhcCCccCCCccccccccccccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999985 4579999999998899999999999987654
No 2
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.57 E-value=5e-16 Score=118.90 Aligned_cols=68 Identities=19% Similarity=0.451 Sum_probs=61.9
Q ss_pred ccccccccccccCCcCCCeecCCCCccccccHHhhhc--cCCCCCCCCCCcCCCCcccHHHHHHHHHHHH
Q 019010 219 SLRAILSDPVTGNLMDDAMILPCGHSFGAAGVQHVIR--MKACYTCSRPVLEDSIAPNLSLRAAVQAFRR 286 (347)
Q Consensus 219 ~L~e~L~CPIClell~dPVtl~CGHsFC~~CL~~~le--~~~CP~Cr~~v~~~~l~pN~~L~~LVe~~k~ 286 (347)
.+.+.|.||||+++|.+||+++|||+||+.||.+|++ ...||.|+.++....+.+|..|+.+|+.+..
T Consensus 4 eiP~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~~l~pN~~L~~~I~~~~~ 73 (78)
T d1t1ha_ 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCE 73 (78)
T ss_dssp CCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHHHHHHHH
T ss_pred CCCccCCCcCcCchhhCceEccCCCcchHHHHHHHHHHCCCCCCcccccCCcccccchHHHHHHHHHHHH
Confidence 3568899999999999999999999999999999996 4579999999999999999999999987754
No 3
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=2.4e-15 Score=120.82 Aligned_cols=69 Identities=16% Similarity=0.357 Sum_probs=60.8
Q ss_pred ccccccccccccCCcCCCeecCCCCccccccHHhhhc----cCCCCCCCCCCcCCCCcccHHHHHHHHHHHHH
Q 019010 219 SLRAILSDPVTGNLMDDAMILPCGHSFGAAGVQHVIR----MKACYTCSRPVLEDSIAPNLSLRAAVQAFRRE 287 (347)
Q Consensus 219 ~L~e~L~CPIClell~dPVtl~CGHsFC~~CL~~~le----~~~CP~Cr~~v~~~~l~pN~~L~~LVe~~k~~ 287 (347)
.+.+.|.||||+++|.+|++++|||+||..||..|+. ...||.||..+....+.++..+..+++.+...
T Consensus 17 ~l~~~l~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~~ve~l~~~ 89 (103)
T d1jm7a_ 17 AMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLKI 89 (103)
T ss_dssp HHHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCCCSSSHHHHHHHHH
T ss_pred hcccCcCCCccCchhCCeEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhhCCcCHHHHHHHHHHHHH
Confidence 4567789999999999999999999999999999985 24899999999988899999888888877543
No 4
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.1e-14 Score=115.72 Aligned_cols=71 Identities=23% Similarity=0.371 Sum_probs=63.0
Q ss_pred ccccccccccccccCCcCCCeec-CCCCccccccHHhhhccCCCCCCCCCCcCCCCcccHHHHHHHHHHHHHH
Q 019010 217 GDSLRAILSDPVTGNLMDDAMIL-PCGHSFGAAGVQHVIRMKACYTCSRPVLEDSIAPNLSLRAAVQAFRREE 288 (347)
Q Consensus 217 ~~~L~e~L~CPIClell~dPVtl-~CGHsFC~~CL~~~le~~~CP~Cr~~v~~~~l~pN~~L~~LVe~~k~~~ 288 (347)
...+.+.+.||||+++|.+|+++ +|||+||..||.+|+. ..||.||.++....+.+|..|..+++.++..+
T Consensus 16 l~~l~~~l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~-~~CP~Cr~~~~~~~l~~n~~l~~lv~~~~~~~ 87 (97)
T d1jm7b_ 16 LDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG-TGCPVCYTPAWIQDLKINRQLDSMIQLCSKLR 87 (97)
T ss_dssp HHHHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT-TBCSSSCCBCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred HHhhhhcCCCccCCchhhcCceeCCCCCchhHHHHHHHHh-ccccccCCcCchhhCcccHHHHHHHHHHHHHH
Confidence 34567888999999999999986 6999999999999985 46999999999889999999999998887765
No 5
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=3.1e-14 Score=113.97 Aligned_cols=70 Identities=21% Similarity=0.321 Sum_probs=62.2
Q ss_pred ccccccccccccCCcCCCeecCCC-CccccccHHhhhc-cCCCCCCCCCCcCCCCcccHHHHHHHHHHHHHH
Q 019010 219 SLRAILSDPVTGNLMDDAMILPCG-HSFGAAGVQHVIR-MKACYTCSRPVLEDSIAPNLSLRAAVQAFRREE 288 (347)
Q Consensus 219 ~L~e~L~CPIClell~dPVtl~CG-HsFC~~CL~~~le-~~~CP~Cr~~v~~~~l~pN~~L~~LVe~~k~~~ 288 (347)
.+...|.||||+++|.+||+++|+ |+||+.||.+|+. ...||.|+.++....+.+|..|+.+|+.++...
T Consensus 18 ~~P~~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~~~~L~pN~~Lr~~I~~~~~~~ 89 (98)
T d1wgma_ 18 DACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 89 (98)
T ss_dssp SCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEECHHHHHHHHHHHHHS
T ss_pred CCcHHhCCcCchhHHHHHHhcccccchhhHHHHHHHHHhcCCcccccccccchhhcchHHHHHHHHHHHHHH
Confidence 346789999999999999999966 5899999999996 568999999999999999999999998877654
No 6
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.39 E-value=6.9e-14 Score=109.84 Aligned_cols=64 Identities=16% Similarity=0.345 Sum_probs=52.6
Q ss_pred cccccccccccccCCcCCCeecCCCCccccccHHhhhc--cCCCCCCCCCCcCCCCc-ccHHHHHHH
Q 019010 218 DSLRAILSDPVTGNLMDDAMILPCGHSFGAAGVQHVIR--MKACYTCSRPVLEDSIA-PNLSLRAAV 281 (347)
Q Consensus 218 ~~L~e~L~CPIClell~dPVtl~CGHsFC~~CL~~~le--~~~CP~Cr~~v~~~~l~-pN~~L~~LV 281 (347)
..+...+.||||++++.+|++++|||+||+.||.+|++ ...||.||.++...++. |...+.+++
T Consensus 18 ~d~~~~l~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~~l~~P~~~~l~~l 84 (86)
T d1rmda2 18 AHFVKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNIL 84 (86)
T ss_dssp HHHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHH
T ss_pred hhhccCcCCccCCcchhcceecCCCChhhHHHHHHHHhhCCCcCcccCCCCChhhccCHHHHHHHHh
Confidence 44557789999999999999999999999999999996 46899999998866554 455555544
No 7
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.22 E-value=1.1e-12 Score=94.52 Aligned_cols=50 Identities=10% Similarity=0.206 Sum_probs=44.6
Q ss_pred cccccccCCcCCCeecC-CCCccccccHHhhhc-cCCCCCCCCCCcCCCCcc
Q 019010 224 LSDPVTGNLMDDAMILP-CGHSFGAAGVQHVIR-MKACYTCSRPVLEDSIAP 273 (347)
Q Consensus 224 L~CPIClell~dPVtl~-CGHsFC~~CL~~~le-~~~CP~Cr~~v~~~~l~p 273 (347)
|.||||+++|.+||.++ |||+||+.||.+|++ ...||.||.++...++.+
T Consensus 1 l~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~~~dLip 52 (56)
T d2baya1 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVE 52 (56)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCEE
T ss_pred CCCccCCchHHhcCccCCCCCcccHHHHHHHHhhccCCCccCCcCCHHhcee
Confidence 57999999999999885 999999999999997 668999999998776654
No 8
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=8e-12 Score=90.32 Aligned_cols=47 Identities=17% Similarity=0.256 Sum_probs=41.4
Q ss_pred cccccccccCCcCCCeecCCCCccccccHHhhhccCCCCCCCCCCcCCC
Q 019010 222 AILSDPVTGNLMDDAMILPCGHSFGAAGVQHVIRMKACYTCSRPVLEDS 270 (347)
Q Consensus 222 e~L~CPIClell~dPVtl~CGHsFC~~CL~~~le~~~CP~Cr~~v~~~~ 270 (347)
+.|.|+||++.+.+|++++|||+||..||.+| ...||.||+.+....
T Consensus 5 ~~l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~--~~~CP~Cr~~~~~~~ 51 (56)
T d1bora_ 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEAS--GMQCPICQAPWPLGA 51 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSS--SSSCSSCCSSSSCCS
T ss_pred CCCCCcccCcccCCCEEecCCCHHhHHHHHcC--CCcCcCCCCcccCCC
Confidence 45789999999999999999999999999875 568999999987543
No 9
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=1.9e-11 Score=93.72 Aligned_cols=46 Identities=17% Similarity=0.259 Sum_probs=41.5
Q ss_pred cccccccCCcCCCeecCCCCccccccHHhhhc--cCCCCCCCCCCcCC
Q 019010 224 LSDPVTGNLMDDAMILPCGHSFGAAGVQHVIR--MKACYTCSRPVLED 269 (347)
Q Consensus 224 L~CPIClell~dPVtl~CGHsFC~~CL~~~le--~~~CP~Cr~~v~~~ 269 (347)
..|+||++.+.+|++++|||.||..||.+|+. ...||+||..+...
T Consensus 24 ~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~ 71 (79)
T d1fbva4 24 QLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT 71 (79)
T ss_dssp TBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCC
T ss_pred CCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCC
Confidence 46999999999999999999999999999996 45799999998744
No 10
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.00 E-value=7.1e-11 Score=87.78 Aligned_cols=43 Identities=28% Similarity=0.448 Sum_probs=38.3
Q ss_pred ccccccCCcCCCee-cCCCCccccccHHhhhc-cCCCCCCCCCCc
Q 019010 225 SDPVTGNLMDDAMI-LPCGHSFGAAGVQHVIR-MKACYTCSRPVL 267 (347)
Q Consensus 225 ~CPIClell~dPVt-l~CGHsFC~~CL~~~le-~~~CP~Cr~~v~ 267 (347)
.||||++.+.++++ ++|||+||..||.+|++ ...||.||.++.
T Consensus 7 ~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~ 51 (68)
T d1chca_ 7 RCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCccCCcCccCCcEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchH
Confidence 49999999988765 78999999999999997 678999999875
No 11
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=1.2e-10 Score=86.01 Aligned_cols=51 Identities=18% Similarity=0.329 Sum_probs=39.6
Q ss_pred cccccccccCCcC-C----CeecCCCCccccccHHhhhc--cCCCCCCCCCCcCCCCc
Q 019010 222 AILSDPVTGNLMD-D----AMILPCGHSFGAAGVQHVIR--MKACYTCSRPVLEDSIA 272 (347)
Q Consensus 222 e~L~CPIClell~-d----PVtl~CGHsFC~~CL~~~le--~~~CP~Cr~~v~~~~l~ 272 (347)
+...||||++.+. . .++++|||.||..||.+|+. ...||.||+++....+.
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~~~~~ 59 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCE
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccccccc
Confidence 3567999998642 2 24568999999999999985 45799999998765543
No 12
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=98.82 E-value=1.2e-09 Score=78.25 Aligned_cols=48 Identities=27% Similarity=0.423 Sum_probs=39.1
Q ss_pred cccccccccccCCcCC---Ceec-CCCCccccccHHhhhc-cCCCCCCCCCCc
Q 019010 220 LRAILSDPVTGNLMDD---AMIL-PCGHSFGAAGVQHVIR-MKACYTCSRPVL 267 (347)
Q Consensus 220 L~e~L~CPIClell~d---PVtl-~CGHsFC~~CL~~~le-~~~CP~Cr~~v~ 267 (347)
+.+...|+||++.+.+ .+++ .|+|.||..||.+|++ ...||.||..+.
T Consensus 2 ~ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~ 54 (55)
T d1iyma_ 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCEeE
Confidence 3456779999998864 3445 4999999999999997 568999999763
No 13
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.80 E-value=7.5e-10 Score=78.24 Aligned_cols=45 Identities=16% Similarity=0.268 Sum_probs=36.5
Q ss_pred cccccccCCcCC----CeecCCCCccccccHHhhhc--cCCCCCCCCCCcC
Q 019010 224 LSDPVTGNLMDD----AMILPCGHSFGAAGVQHVIR--MKACYTCSRPVLE 268 (347)
Q Consensus 224 L~CPIClell~d----PVtl~CGHsFC~~CL~~~le--~~~CP~Cr~~v~~ 268 (347)
+.||||++.|.. ++.++|||.||..||.+|+. ...||+||+++..
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCCC
Confidence 469999997743 34457999999999999997 4479999998753
No 14
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.51 E-value=1.7e-08 Score=81.05 Aligned_cols=44 Identities=14% Similarity=0.144 Sum_probs=35.5
Q ss_pred cccccccCCcCCC------------------eecCCCCccccccHHhhhc------cCCCCCCCCCCc
Q 019010 224 LSDPVTGNLMDDA------------------MILPCGHSFGAAGVQHVIR------MKACYTCSRPVL 267 (347)
Q Consensus 224 L~CPIClell~dP------------------Vtl~CGHsFC~~CL~~~le------~~~CP~Cr~~v~ 267 (347)
-.|+||++.|..+ +.++|+|.||..||..|++ ...||+||..+.
T Consensus 26 ~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T d1v87a_ 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred ccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhc
Confidence 3599999877543 3467999999999999996 237999998875
No 15
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.37 E-value=6.9e-08 Score=74.63 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=35.1
Q ss_pred ccccccCCcCC------------------CeecCCCCccccccHHhhhc-cCCCCCCCCCCc
Q 019010 225 SDPVTGNLMDD------------------AMILPCGHSFGAAGVQHVIR-MKACYTCSRPVL 267 (347)
Q Consensus 225 ~CPIClell~d------------------PVtl~CGHsFC~~CL~~~le-~~~CP~Cr~~v~ 267 (347)
.|+||+..+.+ ++.++|||.||..||.+|++ ...||+||+.+.
T Consensus 23 ~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~ 84 (88)
T d3dplr1 23 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 84 (88)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred cCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHCCcCCCCCCccc
Confidence 48888776643 24467999999999999997 668999999875
No 16
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.20 E-value=2.5e-07 Score=66.36 Aligned_cols=47 Identities=9% Similarity=0.113 Sum_probs=39.0
Q ss_pred cccccccccCCcCCCeecCC-----CCccccccHHhhhc---cCCCCCCCCCCcC
Q 019010 222 AILSDPVTGNLMDDAMILPC-----GHSFGAAGVQHVIR---MKACYTCSRPVLE 268 (347)
Q Consensus 222 e~L~CPIClell~dPVtl~C-----GHsFC~~CL~~~le---~~~CP~Cr~~v~~ 268 (347)
+...|+||++.+.++...+| +|.|+..||.+|+. ...||+||+++..
T Consensus 5 d~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~~ 59 (60)
T d1vyxa_ 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeeec
Confidence 45679999998888877765 49999999999995 4589999998753
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.80 E-value=1.9e-06 Score=66.37 Aligned_cols=43 Identities=12% Similarity=0.159 Sum_probs=32.1
Q ss_pred ccccccccCCcC--C-CeecCCCCccccccHHhhhc---------cCCCCCCCCC
Q 019010 223 ILSDPVTGNLMD--D-AMILPCGHSFGAAGVQHVIR---------MKACYTCSRP 265 (347)
Q Consensus 223 ~L~CPIClell~--d-PVtl~CGHsFC~~CL~~~le---------~~~CP~Cr~~ 265 (347)
...|+||++.+. + +..+.|+|.||..||..|++ ...||.|.-+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C~ 59 (94)
T d1wima_ 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACP 59 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCS
T ss_pred CCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCCC
Confidence 346999998764 3 33457999999999999984 1369986543
No 18
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=78.52 E-value=0.094 Score=38.27 Aligned_cols=41 Identities=20% Similarity=0.338 Sum_probs=31.2
Q ss_pred ccccccccCCcCCCeecCCCCccccccHHhhhccCCCCCCCCCCc
Q 019010 223 ILSDPVTGNLMDDAMILPCGHSFGAAGVQHVIRMKACYTCSRPVL 267 (347)
Q Consensus 223 ~L~CPIClell~dPVtl~CGHsFC~~CL~~~le~~~CP~Cr~~v~ 267 (347)
.+.||.|...|.. .=||.+|..|-..+.....||.|.+++.
T Consensus 2 ~~~CP~C~~eL~~----~~~~~~C~~C~~~~~~~a~CPdC~~~Le 42 (71)
T d2jnea1 2 ELHCPQCQHVLDQ----DNGHARCRSCGEFIEMKALCPDCHQPLQ 42 (71)
T ss_dssp CCBCSSSCSBEEE----ETTEEEETTTCCEEEEEEECTTTCSBCE
T ss_pred CCcCCCccCcccc----cCCCEehhhhhhhheeEEeCCccccHHH
Confidence 3679999976542 2478889999877666678999998864
No 19
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.48 E-value=1.4 Score=32.00 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=27.4
Q ss_pred cccccccccCCcCCCeecCC----CCccccccHHhhhc
Q 019010 222 AILSDPVTGNLMDDAMILPC----GHSFGAAGVQHVIR 255 (347)
Q Consensus 222 e~L~CPIClell~dPVtl~C----GHsFC~~CL~~~le 255 (347)
..|.|.||.+-|.|.-...| +|.||-.|-...++
T Consensus 7 ~~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik 44 (80)
T d2cs3a1 7 GPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIK 44 (80)
T ss_dssp CSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHH
T ss_pred CceeeeeehhhhcCCceEeCCCCcCCceeccccHHHHH
Confidence 34789999999988665554 69999999988874
No 20
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.03 E-value=4.5 Score=29.97 Aligned_cols=44 Identities=14% Similarity=0.219 Sum_probs=31.0
Q ss_pred ccccccccccCCcCCCeecC---CCCccccccHHhhh--c---------------cCCCCCCCCC
Q 019010 221 RAILSDPVTGNLMDDAMILP---CGHSFGAAGVQHVI--R---------------MKACYTCSRP 265 (347)
Q Consensus 221 ~e~L~CPIClell~dPVtl~---CGHsFC~~CL~~~l--e---------------~~~CP~Cr~~ 265 (347)
...-.|+|| +.+..-..+| |+..|...||.+.- . ..+|+.|-..
T Consensus 13 ~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC~~C~nl 76 (89)
T d1wila_ 13 VNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CcCcccccc-CcccccceecceeecchhhHHHHHHhcccccHHHHHHHHhhcCCCCcchhhhcch
Confidence 345579999 5555555566 78899999998863 1 3589999653
No 21
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.83 E-value=6.1 Score=28.03 Aligned_cols=43 Identities=12% Similarity=0.225 Sum_probs=25.2
Q ss_pred cccccccCCcC-CCeecC---CCCccccccHH---hhhc---cCCCCCCCCCCc
Q 019010 224 LSDPVTGNLMD-DAMILP---CGHSFGAAGVQ---HVIR---MKACYTCSRPVL 267 (347)
Q Consensus 224 L~CPIClell~-dPVtl~---CGHsFC~~CL~---~~le---~~~CP~Cr~~v~ 267 (347)
+.| ||..... +-.++. |..-|...|+. .... .+.||.|+....
T Consensus 13 v~C-iC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~g 65 (79)
T d1wepa_ 13 VYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred eEe-ECCCccCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCcC
Confidence 446 9987643 323444 66556666653 2211 479999987544
No 22
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=46.32 E-value=7.9 Score=28.77 Aligned_cols=44 Identities=16% Similarity=0.287 Sum_probs=30.6
Q ss_pred cccccccCCcC-----CCeec--CCCCccccccHHhhhc--cCCCCCCCCCCc
Q 019010 224 LSDPVTGNLMD-----DAMIL--PCGHSFGAAGVQHVIR--MKACYTCSRPVL 267 (347)
Q Consensus 224 L~CPIClell~-----dPVtl--~CGHsFC~~CL~~~le--~~~CP~Cr~~v~ 267 (347)
-.|-||.+-.- ++.+. -|+--.|+.|..=-++ ...||.|+.++.
T Consensus 17 q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Yk 69 (93)
T d1weoa_ 17 QFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp CBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred chhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhh
Confidence 35999987553 22221 2888889999874332 679999998875
No 23
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=42.80 E-value=2.5 Score=25.36 Aligned_cols=29 Identities=7% Similarity=0.079 Sum_probs=20.7
Q ss_pred cccccccCCcCCCe-ecCCCCccccccHHh
Q 019010 224 LSDPVTGNLMDDAM-ILPCGHSFGAAGVQH 252 (347)
Q Consensus 224 L~CPIClell~dPV-tl~CGHsFC~~CL~~ 252 (347)
++|..|..-|.... .-.=|..||..|..+
T Consensus 1 frca~cgk~lestt~adkdgeiyck~cyak 30 (31)
T d1ibia2 1 FRCAKCGKSLESTTLTEKEGEIYCKGCYAK 30 (31)
T ss_dssp EECSSSCCEECSSCSEEETTEEECHHHHHH
T ss_pred CccccccCccccceeeccCCcEEEeeeeec
Confidence 46999988776533 234888999999753
No 24
>d1wd2a_ g.44.1.1 (A:) Ariadne-1 protein homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.21 E-value=4.4 Score=27.79 Aligned_cols=30 Identities=13% Similarity=0.125 Sum_probs=19.6
Q ss_pred ccccccCCcCC-----Ceec---CCCCccccccHHhhh
Q 019010 225 SDPVTGNLMDD-----AMIL---PCGHSFGAAGVQHVI 254 (347)
Q Consensus 225 ~CPIClell~d-----PVtl---~CGHsFC~~CL~~~l 254 (347)
.||-|...+.. -|+- .|++.||+.|...|.
T Consensus 8 ~CP~C~~~ieK~~GCnhM~C~~~~C~~~fCw~C~~~~~ 45 (60)
T d1wd2a_ 8 ECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWE 45 (60)
T ss_dssp CCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSG
T ss_pred CCCCCCCeEEECCCCCCeEeCCCCCCCeEECCCCCccc
Confidence 59999876653 2222 277778888876654
No 25
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.15 E-value=5.6 Score=25.69 Aligned_cols=41 Identities=15% Similarity=0.289 Sum_probs=26.4
Q ss_pred ccccccCCcCCCeec---CCCCccccccHHhhhc-----cCCCCCCCCC
Q 019010 225 SDPVTGNLMDDAMIL---PCGHSFGAAGVQHVIR-----MKACYTCSRP 265 (347)
Q Consensus 225 ~CPIClell~dPVtl---~CGHsFC~~CL~~~le-----~~~CP~Cr~~ 265 (347)
+|.||...-..-.++ .|...|...|+...+. ...||.|+..
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~~ 50 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcCc
Confidence 477887543222223 3888888888876553 4579999753
No 26
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.60 E-value=3.2 Score=24.95 Aligned_cols=10 Identities=40% Similarity=0.418 Sum_probs=4.6
Q ss_pred cccccccCCc
Q 019010 224 LSDPVTGNLM 233 (347)
Q Consensus 224 L~CPIClell 233 (347)
+.||||...|
T Consensus 4 ~~cpic~qrf 13 (32)
T d2epqa1 4 YSCPVCGLRF 13 (32)
T ss_dssp SEETTTTEEC
T ss_pred cccchHHHHh
Confidence 3455554443
No 27
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.77 E-value=7.6 Score=26.55 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=21.5
Q ss_pred cccccccccCCcCCCe----ecCCCCccccccHHhh
Q 019010 222 AILSDPVTGNLMDDAM----ILPCGHSFGAAGVQHV 253 (347)
Q Consensus 222 e~L~CPIClell~dPV----tl~CGHsFC~~CL~~~ 253 (347)
+...|.+|...|.--. --.||++||..|....
T Consensus 7 ~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~~ 42 (64)
T d1joca1 7 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKN 42 (64)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred cCCcCcCcCCcccCCccccchhhhCCeecccccCCc
Confidence 3446999987664221 1249999999997643
No 28
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.92 E-value=7.9 Score=26.71 Aligned_cols=40 Identities=15% Similarity=0.167 Sum_probs=27.5
Q ss_pred ccccccccCCcCCCeec---CCCCccccccHHhhhc-cCCCCCC
Q 019010 223 ILSDPVTGNLMDDAMIL---PCGHSFGAAGVQHVIR-MKACYTC 262 (347)
Q Consensus 223 ~L~CPIClell~dPVtl---~CGHsFC~~CL~~~le-~~~CP~C 262 (347)
...|--|+..+.+.... .|.+.||..|=.=.-+ ...||-|
T Consensus 15 ~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD~fiHe~lh~CpgC 58 (59)
T d1z60a1 15 ERFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CCCccCCCCcCCCCceEECcCCCCccccccchhhhhhhcCCCCC
Confidence 34588888877776543 3889999999432222 4579987
No 29
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.21 E-value=2.3 Score=28.36 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=22.0
Q ss_pred ccccccCCcCCCe----ecCCCCccccccHHhhhc-cCCCCCC
Q 019010 225 SDPVTGNLMDDAM----ILPCGHSFGAAGVQHVIR-MKACYTC 262 (347)
Q Consensus 225 ~CPIClell~dPV----tl~CGHsFC~~CL~~~le-~~~CP~C 262 (347)
.|.+|...|.--. --.||.+||..|...... ...|..|
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C 44 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLC 44 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHH
T ss_pred CccccCCcccCCccCcccccCCcccCccccCCCCCCCeECHhH
Confidence 4778877664211 134999999999754332 3345544
No 30
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.80 E-value=6.1 Score=23.27 Aligned_cols=17 Identities=12% Similarity=0.202 Sum_probs=11.8
Q ss_pred ccccccccccCCcCCCe
Q 019010 221 RAILSDPVTGNLMDDAM 237 (347)
Q Consensus 221 ~e~L~CPIClell~dPV 237 (347)
++.+.|.+|++.|+..+
T Consensus 2 eqvftcs~cqe~f~rrm 18 (30)
T d2dlqa3 2 EQVFTCSVCQETFRRRM 18 (30)
T ss_dssp CCCEECSSSCCEESSHH
T ss_pred cceEEeHHHHHHHHHHH
Confidence 35677888888776543
No 31
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=30.11 E-value=13 Score=26.04 Aligned_cols=29 Identities=10% Similarity=-0.023 Sum_probs=20.3
Q ss_pred ccccccCCcCCC---ee-cCCCCccccccHHhh
Q 019010 225 SDPVTGNLMDDA---MI-LPCGHSFGAAGVQHV 253 (347)
Q Consensus 225 ~CPIClell~dP---Vt-l~CGHsFC~~CL~~~ 253 (347)
.|.+|...|.-- .. -.||+.||..|....
T Consensus 15 ~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~~ 47 (72)
T d1dvpa2 15 VCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 47 (72)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred ccccCCCcccCccccccccccCCeeChhhhCCc
Confidence 599998766421 11 349999999997543
No 32
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=29.89 E-value=6.2 Score=28.72 Aligned_cols=12 Identities=17% Similarity=0.199 Sum_probs=10.5
Q ss_pred ccccccHHhhhc
Q 019010 244 SFGAAGVQHVIR 255 (347)
Q Consensus 244 sFC~~CL~~~le 255 (347)
.||+.||.+|..
T Consensus 39 GFCRNCLskWy~ 50 (79)
T d2o35a1 39 GFCRNCLSNWYR 50 (79)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999984
No 33
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.35 E-value=8.3 Score=26.89 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=21.0
Q ss_pred cccccccccCCcC-C---C-eec-CCCCccccccHHhh
Q 019010 222 AILSDPVTGNLMD-D---A-MIL-PCGHSFGAAGVQHV 253 (347)
Q Consensus 222 e~L~CPIClell~-d---P-Vtl-~CGHsFC~~CL~~~ 253 (347)
....||-|...+. + + ++- .|++.||..|-..|
T Consensus 17 ~~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w 54 (73)
T d2ct7a1 17 KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 54 (73)
T ss_dssp CEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CCCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcch
Confidence 3456898876543 1 1 222 48999999888776
No 34
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=29.32 E-value=8.8 Score=29.45 Aligned_cols=28 Identities=11% Similarity=0.019 Sum_probs=18.9
Q ss_pred cccccccCCcC---CCe--ecCCCCccccccHH
Q 019010 224 LSDPVTGNLMD---DAM--ILPCGHSFGAAGVQ 251 (347)
Q Consensus 224 L~CPIClell~---dPV--tl~CGHsFC~~CL~ 251 (347)
-.|++|...|. ... -..||+.||..|-.
T Consensus 49 ~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~ 81 (124)
T d1zbdb_ 49 NRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 81 (124)
T ss_dssp SBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CcCcccCCcccCCCCCCCcCccCCcccccCCCC
Confidence 35999987654 222 13499999998853
No 35
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.04 E-value=6.8 Score=28.05 Aligned_cols=44 Identities=14% Similarity=0.263 Sum_probs=27.9
Q ss_pred ccccccccccCCcCCC--eec---CCCCccccccHHhhh-----c----cCCCCCCCC
Q 019010 221 RAILSDPVTGNLMDDA--MIL---PCGHSFGAAGVQHVI-----R----MKACYTCSR 264 (347)
Q Consensus 221 ~e~L~CPIClell~dP--Vtl---~CGHsFC~~CL~~~l-----e----~~~CP~Cr~ 264 (347)
...+.|.||....... .++ .|...|...|+...+ . ...||.|..
T Consensus 14 ~~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~ 71 (88)
T d1weva_ 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTR 71 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHH
T ss_pred cCcCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCc
Confidence 4567899998754422 123 388888888875322 1 357888843
No 36
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=26.94 E-value=7.5 Score=33.08 Aligned_cols=22 Identities=23% Similarity=0.449 Sum_probs=13.5
Q ss_pred cccccccCCcC-CCeecCC--CCcc
Q 019010 224 LSDPVTGNLMD-DAMILPC--GHSF 245 (347)
Q Consensus 224 L~CPIClell~-dPVtl~C--GHsF 245 (347)
+.||||...|. ..-.+.| +|+|
T Consensus 2 f~CP~C~~~L~~~~~~l~C~~~h~f 26 (268)
T d1p91a_ 2 FSCPLCHQPLSREKNSYICPQRHQF 26 (268)
T ss_dssp BBCTTTCCBCEEETTEEECTTCCEE
T ss_pred ccCCCCChhhhcCCCeEECCCCCcc
Confidence 68999998664 2223445 4554
No 37
>d2d8xa1 g.39.1.3 (A:33-64) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.08 E-value=10 Score=22.88 Aligned_cols=28 Identities=7% Similarity=0.103 Sum_probs=21.1
Q ss_pred ccccccCCcCCCeecC-CCCccccccHHh
Q 019010 225 SDPVTGNLMDDAMILP-CGHSFGAAGVQH 252 (347)
Q Consensus 225 ~CPIClell~dPVtl~-CGHsFC~~CL~~ 252 (347)
+|-||...|.|--.+. -|...|+.|-.+
T Consensus 1 rC~~C~~~LAD~GFvKnagR~LCrpch~r 29 (32)
T d2d8xa1 1 RCDLCQEVLADIGFVKNAGRHLCRPCHNR 29 (32)
T ss_dssp BCSSSCCBCSSSCCEEETTEEECHHHHHH
T ss_pred CchHHHhHHHHhhhhhcccccccchhhhh
Confidence 4899999888765554 777889888654
No 38
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.26 E-value=7.5 Score=34.54 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=27.9
Q ss_pred cccccccCCcCCCeecC----CC--CccccccHHhhhc-cCCCCCCCCC
Q 019010 224 LSDPVTGNLMDDAMILP----CG--HSFGAAGVQHVIR-MKACYTCSRP 265 (347)
Q Consensus 224 L~CPIClell~dPVtl~----CG--HsFC~~CL~~~le-~~~CP~Cr~~ 265 (347)
-.||||...-.-.+... =| +.+|.-|-..|-- ...||.|...
T Consensus 165 ~~CPvCGs~P~~s~l~~~~~~~G~R~l~C~~C~teW~~~R~~C~~Cg~~ 213 (290)
T d2fiya1 165 TLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES 213 (290)
T ss_dssp SSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC
T ss_pred CcCCCCCCcchhheeeccCCCCCceEEECCCCCCccccccccCCCCCCC
Confidence 46999997544333322 23 4578888888753 4589999765
No 39
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.65 E-value=16 Score=25.09 Aligned_cols=29 Identities=10% Similarity=0.095 Sum_probs=20.1
Q ss_pred ccccccCCcCC---Cee-cCCCCccccccHHhh
Q 019010 225 SDPVTGNLMDD---AMI-LPCGHSFGAAGVQHV 253 (347)
Q Consensus 225 ~CPIClell~d---PVt-l~CGHsFC~~CL~~~ 253 (347)
.|.+|...|.- .-. -.||..||..|....
T Consensus 7 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~ 39 (67)
T d1vfya_ 7 ACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNS 39 (67)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECGGGSCEE
T ss_pred ccccCCCcccCcccccccccCCCEecccccCCc
Confidence 59999876642 111 249999999997544
No 40
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.85 E-value=33 Score=22.58 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=25.8
Q ss_pred ccccccCCcCCCeec--CCCCccccccHHhhhc-----cCCCCCCCCC
Q 019010 225 SDPVTGNLMDDAMIL--PCGHSFGAAGVQHVIR-----MKACYTCSRP 265 (347)
Q Consensus 225 ~CPIClell~dPVtl--~CGHsFC~~CL~~~le-----~~~CP~Cr~~ 265 (347)
.|.+|.+- .-++. .|...|+..|+...+. ...||.|+..
T Consensus 11 ~C~~C~~~--g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~ 56 (61)
T d1mm2a_ 11 FCRVCKDG--GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCTTTCCC--SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCcCCCCC--CeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCc
Confidence 48888752 11221 3888899999865443 4589999765
No 41
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=21.02 E-value=17 Score=22.59 Aligned_cols=9 Identities=33% Similarity=0.973 Sum_probs=6.3
Q ss_pred CCCCCCCCC
Q 019010 257 KACYTCSRP 265 (347)
Q Consensus 257 ~~CP~Cr~~ 265 (347)
..||+|..+
T Consensus 21 ~~CPvCg~~ 29 (37)
T d1nnqa2 21 EYCPVCGAP 29 (37)
T ss_dssp SBCTTTCCB
T ss_pred CcCCCCCCc
Confidence 368888765
No 42
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.67 E-value=11 Score=25.19 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=27.3
Q ss_pred cccccccCCcCCC-eecC---CCCccccccHHhhh------ccCCCCCCCCC
Q 019010 224 LSDPVTGNLMDDA-MILP---CGHSFGAAGVQHVI------RMKACYTCSRP 265 (347)
Q Consensus 224 L~CPIClell~dP-Vtl~---CGHsFC~~CL~~~l------e~~~CP~Cr~~ 265 (347)
..|++|.....+- .++. |+.-|...|+.... ..+.||.|+..
T Consensus 7 ~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 7 GQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 4699998865432 2343 78778888875321 14689999764
No 43
>d2fj8a1 g.3.13.1 (A:64-122) Bowman-Birk inhibitor, BBI {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=20.25 E-value=16 Score=25.14 Aligned_cols=18 Identities=28% Similarity=0.480 Sum_probs=14.2
Q ss_pred CCCccccccccccCCCCCc
Q 019010 20 DPLRSFNCQQHRVGDPGPK 38 (347)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~ 38 (347)
+|-| |-|.-.-.|+|||+
T Consensus 41 ~P~r-~~C~D~~~g~PGP~ 58 (59)
T d2fj8a1 41 RPSR-RVCIDSYFGPVPPR 58 (59)
T ss_dssp STTC-EEECCCEESSCCCC
T ss_pred CCCC-eEEEeeeecCCCCC
Confidence 4566 77887778999997
Done!