BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019012
(347 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 468 bits (1203), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/347 (65%), Positives = 274/347 (78%), Gaps = 4/347 (1%)
Query: 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRG 60
M E+V NKQVI + Y+ G PKE+DMEIK I+LK P+GS+ +VKNLYLSCDPYMR
Sbjct: 1 MAEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSND--VVVKNLYLSCDPYMRS 58
Query: 61 RMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQL 120
RMR SY+ F PG P+ G+GV+KV++S +P F+ GDLV G+TGWEEYS+I T+ L
Sbjct: 59 RMRK-IEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTL 117
Query: 121 RKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
KI D +PLSY+ G+LGMPG TAYAGFHEVCSPK GE VFVSAASGAVGQLVGQ AK+
Sbjct: 118 FKIH-DKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKM 176
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
GCYVVGSAGS +KVDLLK+K GFDEAFNY +E DL AALKR FP GIDIYF+NVGG+ML
Sbjct: 177 LGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKML 236
Query: 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLD 300
DA L+NM+ +GRIAVCGM+S ++ +G+HNLF L+TKRI M+GFL DY HLYP++L+
Sbjct: 237 DAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLE 296
Query: 301 YVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
VI K GK+VYVED+ GLE+AP A VGLFSG+N+GKQVV V+ E
Sbjct: 297 MVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 420 bits (1079), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 264/344 (76%), Gaps = 6/344 (1%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM--RS 64
NKQVI + Y+ G P E+D + + ++L+ P+G++S LVKNLYLSCDPYMR RM
Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNS--VLVKNLYLSCDPYMRIRMGKPD 62
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRK-TEQLRKI 123
T++ + PGQP++G+GVS++++S +P++K GDL+ G+ WEEYS+I T KI
Sbjct: 63 PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122
Query: 124 QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183
Q +PLSY+ GLLGMPG TAYAGF+EVCSPK GE V+VSAASGAVGQLVGQLAK+ GC
Sbjct: 123 Q-HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC 181
Query: 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAA 243
YVVGSAGS +KVDLLK K GFD+AFNY +E+DL AALKRCFP GIDIYF+NVGG+MLDA
Sbjct: 182 YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAV 241
Query: 244 LLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVI 303
L+NM HGRIAVCGM+S ++ + +G+HNL ++ KR ++GF+ SD+ Y +FL++V+
Sbjct: 242 LVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVL 301
Query: 304 SNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+ ++GKI YVED+ +GLE AP A VGLF GKNVGKQVV VA E
Sbjct: 302 PHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 180/303 (59%), Gaps = 6/303 (1%)
Query: 43 GAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLV 102
G LVKN YLS DP MRG M + SYIPP G+ + GV KV+ S +P F+ GD V
Sbjct: 39 GQILVKNEYLSLDPAMRGWMNDA--RSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYV 96
Query: 103 AGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVF 162
G G ++Y I + + K+ P PL ++ LGM G TAY +V PK+GE V
Sbjct: 97 NGALGVQDY-FIGEPKGFYKVDPSRA-PLPRYLSALGMTGMTAYFALLDVGQPKNGETVV 154
Query: 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR 222
+S A+GAVG + GQ+A+L GC VVG AG ++K L +LGFD A +Y +E DL A LKR
Sbjct: 155 ISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKR 213
Query: 223 CFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDP-QGIHNLFTLVTKRI 281
P+GID++FDNVGGE+LD L + RI +CG +S ++ + +G N +L+ R
Sbjct: 214 ECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRA 273
Query: 282 TMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQV 341
M+G + DY +P L + + +GK+ ED+ EGLE P + LFSG+N GK V
Sbjct: 274 RMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLV 333
Query: 342 VRV 344
++V
Sbjct: 334 LKV 336
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 202/347 (58%), Gaps = 30/347 (8%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V+ K + + +G P ++D E+K ++L K +G L++ L+LS DPYMR +
Sbjct: 6 VKAKSWTLKKHFQGKPTQSDFELKT--VELPPLK---NGEVLLEALFLSVDPYMRIASKR 60
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLI--RKTEQLRK 122
G + G V++VV+S N F G +V +GW + + + E+L
Sbjct: 61 ---------LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLT 111
Query: 123 IQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
PD +PLS +G +GMPG TAY G EVC K GE V VSAA+GAVG +VGQ+AKL G
Sbjct: 112 EWPDK-LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKG 170
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
C VVG+AGS +K+ LK ++GFD AFNY L ALK+ P G D YFDNVGGE L+
Sbjct: 171 CKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNT 229
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHD--PQGIHNLFTLVTKRITMKGFL----QSDYLHLYP 296
L M+D G+IA+CG +S+++ D P G + +++ K++ ++GF+ Q D
Sbjct: 230 VLSQMKDFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVREKAL 288
Query: 297 R-FLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
R + +V+ +GKI Y E + +G EN PAAF+ + +G N+GK VV
Sbjct: 289 RDLMKWVL----EGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 186/347 (53%), Gaps = 26/347 (7%)
Query: 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMR 63
Q K + + G P +D E+K S +L K +G L++ L+L+ DPYMR +
Sbjct: 21 QSMTKTWTLKKHFVGYPTNSDFELKTS--ELPPLK---NGEVLLEALFLTVDPYMRVAAK 75
Query: 64 SSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLI--RKTEQLR 121
G + G V+KVV+S N G +V GW +S+ + E+L
Sbjct: 76 R---------LKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLL 126
Query: 122 KIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
PD IPLS +G +GMPG TAY G E+C K GE V V+AA+GAVG +VGQ+AKL
Sbjct: 127 TEWPDT-IPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLK 185
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GC VVG+ GS +KV L+ KLGFD FNY L LK+ P G D YFDNVGGE +
Sbjct: 186 GCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSN 244
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT-KRITMKGFL----QSDYLHLYP 296
+ M+ GRIA+CG +S ++ P +V + + M+ F+ Q D
Sbjct: 245 TVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ--- 301
Query: 297 RFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
+ L ++ +GKI Y E + EG EN PAAF+G+ G N+GK +V+
Sbjct: 302 KALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 348
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 185/344 (53%), Gaps = 26/344 (7%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSF 66
K + + G P +D E+K S +L K +G L++ L+L+ DPYMR +
Sbjct: 3 TKTWTLKKHFVGYPTNSDFELKTS--ELPPLK---NGEVLLEALFLTVDPYMRVAAKR-- 55
Query: 67 TSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLI--RKTEQLRKIQ 124
G + G V+KVV+S N G +V GW +S+ + E+L
Sbjct: 56 -------LKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEW 108
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
PD IPLS +G +GMPG TAY G E+C K GE V V+AA+GAVG +VGQ+AKL GC
Sbjct: 109 PDT-IPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK 167
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
VVG+ GS +KV L+ KLGFD FNY L LK+ P G D YFDNVGGE + +
Sbjct: 168 VVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVI 226
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT-KRITMKGFL----QSDYLHLYPRFL 299
M+ GRIA+CG +S ++ P +V + + M+ F+ Q D + L
Sbjct: 227 GQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KAL 283
Query: 300 DYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
++ +GKI Y E + EG EN PAAF+G+ G N+GK +V+
Sbjct: 284 KDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 327
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 165/321 (51%), Gaps = 13/321 (4%)
Query: 37 PKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNF 96
P + G V+ LYLS DPYMR RM + YI P+ Q V+G G+ + +S + N
Sbjct: 32 PDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNL 91
Query: 97 KPGDLVAGLTGWEEYSLIRKTEQLRKIQP---DHHIPLSYHIGLLGMPGFTAYAGFHEV- 152
GD V + +I L K+ P D H LSY +G +GMPG T+ G E
Sbjct: 92 TKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGH--LSYFLGAIGMPGLTSLIGIQEKG 149
Query: 153 -CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNY 210
+ S + + VS A+GA G + GQ+ GC VVG G+ +K LL ++LGFD A NY
Sbjct: 150 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINY 209
Query: 211 NDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHS----YHD 266
+ ++ L+ P G+D+YFDNVGG + D + M ++ I +CG +S ++ Y
Sbjct: 210 KKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPP 268
Query: 267 PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPA 326
P + IT + FL +Y + + + +K+GK+ E + GLEN A
Sbjct: 269 PLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGA 328
Query: 327 AFVGLFSGKNVGKQVVRVACE 347
AF + +G N+GKQ+V ++ E
Sbjct: 329 AFQSMMTGGNIGKQIVCISEE 349
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 165/321 (51%), Gaps = 13/321 (4%)
Query: 37 PKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNF 96
P + G V+ LYLS DPYMR RM + YI P+ Q V+G G+ + +S + N
Sbjct: 37 PDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNL 96
Query: 97 KPGDLVAGLTGWEEYSLIRKTEQLRKIQP---DHHIPLSYHIGLLGMPGFTAYAGFHEV- 152
GD V + +I L K+ P D H LSY +G +GMPG T+ G E
Sbjct: 97 TKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGH--LSYFLGAIGMPGLTSLIGIQEKG 154
Query: 153 -CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNY 210
+ S + + VS A+GA G + GQ+ GC VVG G+ +K LL ++LGFD A NY
Sbjct: 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINY 214
Query: 211 NDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHS----YHD 266
+ ++ L+ P G+D+YFDNVGG + D + M ++ I +CG +S ++ Y
Sbjct: 215 KKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPP 273
Query: 267 PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPA 326
P + IT + FL +Y + + + +K+GK+ E + GLEN A
Sbjct: 274 PLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGA 333
Query: 327 AFVGLFSGKNVGKQVVRVACE 347
AF + +G N+GKQ+V ++ E
Sbjct: 334 AFQSMMTGGNIGKQIVCISEE 354
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 164/324 (50%), Gaps = 15/324 (4%)
Query: 33 QLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSD 92
+ P + G V+ LYLS DPYMR +M + Y+ P+ Q +G G+ V +S
Sbjct: 29 EFSLPDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESK 88
Query: 93 NPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQP---DHHIPLSYHIGLLGMPGFTAYAGF 149
+ GD V + I L K+ P D H LSY +G +GMPG T+ G
Sbjct: 89 HQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGH--LSYFLGAIGMPGLTSLIGV 146
Query: 150 HEV--CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDE 206
E S S + + VS A+GA G L GQ+ L GC VVG G+ +K L ++LGFD
Sbjct: 147 QEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA 206
Query: 207 AFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHD 266
A NY ++ L+ P G+D+YFDNVGG++ +A + M ++ I +CG +S +S +D
Sbjct: 207 AVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYS-ND 264
Query: 267 PQGIHNLFTLV-----TKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGL 321
L V + IT + F +Y + + + +K+GK+ E M +GL
Sbjct: 265 VPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGL 324
Query: 322 ENAPAAFVGLFSGKNVGKQVVRVA 345
EN AF + +G NVGKQ+V ++
Sbjct: 325 ENMGVAFQSMMTGGNVGKQIVCIS 348
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 153/315 (48%), Gaps = 13/315 (4%)
Query: 41 DSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGD 100
+ G V+ LYLS DPY R + + Y+ P+ Q +G G+ V +S + GD
Sbjct: 47 NEGQVQVRTLYLSVDPYXRCKXNEDTGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGD 106
Query: 101 LVAGLTGWEEYSLIRKTEQLRKIQP---DHHIPLSYHIGLLGMPGFTAYAGFHEV--CSP 155
V + I L K+ P D H LSY +G +G PG T+ G E S
Sbjct: 107 FVTSFYWPWQTKAILDGNGLEKVDPQLVDGH--LSYFLGAIGXPGLTSLIGVQEKGHISA 164
Query: 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214
S + VS A+GA G L GQ+ L GC VVG G+ +K L ++LGFD A NY
Sbjct: 165 GSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYK-TG 223
Query: 215 DLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLF 274
++ L+ P G+D+YFDNVGG++ + + ++ I +CG +S ++ P
Sbjct: 224 NVAEQLREACPGGVDVYFDNVGGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPP 283
Query: 275 TLVTKR----ITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVG 330
+ R IT + F +Y + + + +K+GK+ E + +GLEN AF
Sbjct: 284 AVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQS 343
Query: 331 LFSGKNVGKQVVRVA 345
+G NVGKQ+V ++
Sbjct: 344 XXTGGNVGKQIVCIS 358
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 41/325 (12%)
Query: 43 GAFLVKNLYLSCDP----YMRGRMRSSFTSSYIPPFVPGQPVEGFG-VSKVVDSDNPNFK 97
G LV+N ++ + Y GR + S PPF G EG G V + S + +
Sbjct: 62 GDLLVRNRFVGVNASDINYSAGR----YDPSVKPPFDIG--FEGIGEVVALGLSASARYT 115
Query: 98 PGDLVAGLT--GWEEYSLIRKT--EQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVC 153
G VA + + EY+++ + + ++P++ L + G TAY E+
Sbjct: 116 VGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLL--------VSGTTAYISLKELG 167
Query: 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213
G+ V V+AA+G GQ QL+K C+V+G+ S +K LK+ LG D NY E
Sbjct: 168 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTE 226
Query: 214 TDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL 273
+ LK+ +P+G+D+ +++VGG M D A+ + GR+ V G +S Y P G+ +
Sbjct: 227 -PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS--GYQTPTGLSPV 283
Query: 274 ------FTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE-------- 319
L+ K +++GF + YL Y + +++ G +V D+ +
Sbjct: 284 KAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFT 343
Query: 320 GLENAPAAFVGLFSGKNVGKQVVRV 344
GLE+ A ++ GKN GK VV +
Sbjct: 344 GLESIFRAVNYMYMGKNTGKIVVEL 368
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 41/325 (12%)
Query: 43 GAFLVKNLYLSCDP----YMRGRMRSSFTSSYIPPFVPGQPVEGFG-VSKVVDSDNPNFK 97
G LV+N ++ + Y GR + S PPF G EG G V + S + +
Sbjct: 54 GDLLVRNRFVGVNASDINYSAGR----YDPSVKPPFDIG--FEGIGEVVALGLSASARYT 107
Query: 98 PGDLVAGLT--GWEEYSLIRKT--EQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVC 153
G VA + + EY+++ + + ++P++ L + G TAY E+
Sbjct: 108 VGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLL--------VSGTTAYISLKELG 159
Query: 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213
G+ V V+AA+G GQ QL+K C+V+G+ S +K LK+ LG D NY E
Sbjct: 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTE 218
Query: 214 TDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL 273
+ LK+ +P+G+D+ +++VGG M D A+ + GR+ V G +S Y P G+ +
Sbjct: 219 -PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS--GYQTPTGLSPV 275
Query: 274 ------FTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE-------- 319
L+ K +++GF + YL Y + +++ G +V D+ +
Sbjct: 276 KAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFT 335
Query: 320 GLENAPAAFVGLFSGKNVGKQVVRV 344
GLE+ A ++ GKN GK VV +
Sbjct: 336 GLESIFRAVNYMYMGKNTGKIVVEL 360
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 41/325 (12%)
Query: 43 GAFLVKNLYLSCDP----YMRGRMRSSFTSSYIPPFVPGQPVEGFG-VSKVVDSDNPNFK 97
G LV+N ++ + Y GR + S PPF G EG G V + S + +
Sbjct: 33 GDLLVRNRFVGVNASDINYSAGR----YDPSVKPPFDIG--FEGIGEVVALGLSASARYT 86
Query: 98 PGDLVAGLT--GWEEYSLIRKT--EQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVC 153
G VA + + EY+++ + + ++P++ L + G TAY E+
Sbjct: 87 VGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLL--------VSGTTAYISLKELG 138
Query: 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213
G+ V V+AA+G GQ QL+K C+V+G+ S +K LK+ LG D NY E
Sbjct: 139 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTE 197
Query: 214 TDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL 273
+ LK+ +P+G+D+ +++VGG M D A+ + GR+ V G +S Y P G+ +
Sbjct: 198 -PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS--GYQTPTGLSPV 254
Query: 274 ------FTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE-------- 319
L+ K +++GF + YL Y + +++ G +V D+ +
Sbjct: 255 KAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFT 314
Query: 320 GLENAPAAFVGLFSGKNVGKQVVRV 344
GLE+ A ++ GKN GK VV +
Sbjct: 315 GLESIFRAVNYMYMGKNTGKIVVEL 339
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 45 FLVKNLYLSCDPYMRGRMRSSFTSSYIP---PFVPGQPVEGFGVSKVVDSDNPNFKPGDL 101
L+KN Y + + S F P P+V G+ G V+K NF+ GD
Sbjct: 38 LLIKNKYTGVN-----YIESYFRKGIYPCEKPYVLGREASGTVVAK--GKGVTNFEVGDQ 90
Query: 102 VAGLTG--WEEYSLIRK---TEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPK 156
VA ++ + +YS I +L K D + L Y GLL + TA + +E K
Sbjct: 91 VAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL-YAAGLLQV--LTALSFTNEAYHVK 147
Query: 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDL 216
G+YV + AA+G VG ++ QL K+ G + + A + +K+ + K + G + N + E L
Sbjct: 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKEDIL 206
Query: 217 VAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVS 260
LK +G+D FD+VG + + +L ++ G G S
Sbjct: 207 RQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 54 CDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT----GWE 109
+ Y+R +++ + P+ PG V G V + V + FK GD V + G+
Sbjct: 72 VETYIR---SGTYSRKPLLPYTPGSDVAG--VIEAVGDNASAFKKGDRVFTSSTISGGYA 126
Query: 110 EYSLIRKTEQLRKIQPDHHI-----PLSYHIGL-LGMPGFTAY-AGFHEVCSPKSGEYVF 162
EY+L DH + L + G +G+P FTAY A H C K+GE V
Sbjct: 127 EYAL----------AADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACV-KAGESVL 175
Query: 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSS--QKVDLLKNKLGFDEAFNYNDETDLVAAL 220
V ASG VG Q+A+ +G ++G+AG+ QK+ +L+N G E FN+ + +
Sbjct: 176 VHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQN--GAHEVFNHREVNYIDKIK 232
Query: 221 KRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCG 257
K +GIDI + + L L + GR+ V G
Sbjct: 233 KYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 65 SFTSSYIP-PFVPGQP--VEGFGVSKVVDSDNP---NFKPGDLVAG-LTGWEEYSLIR-- 115
++ + IP P V G+P V GF + VV+ P +F G+ V L YS R
Sbjct: 45 TYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLY 104
Query: 116 KTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVG 175
E+L K+ D + H+ L + G TA H+ K G+YV + AA+G +G ++
Sbjct: 105 PAEKLIKVPKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMV 163
Query: 176 QLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235
A+ G V+G+ + +K + + KLG NY+ + + +G+D+ +D++
Sbjct: 164 PWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSI 222
Query: 236 GGEMLDAALLNMRDHGRIAVCGMVS 260
G + L +L +R G A G S
Sbjct: 223 GKDTLQKSLDCLRPRGMCAAYGHAS 247
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 123/297 (41%), Gaps = 53/297 (17%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVA------GLT---GWEEYSLIRKTEQLRKI 123
PFVPG + G VV S +P F+ GD V G+T G+ EY+ ++
Sbjct: 61 PFVPGIDLAGV----VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYA---------RL 107
Query: 124 QPDHHIPLSYHIGL-----LGMPGFTAYAGFHEV----CSPKSGEYVFVSAASGAVGQL- 173
+ +PL + L +G GFTA H + +P+ G V V+ A+G VG L
Sbjct: 108 HGEWLVPLPKGLTLKEAXAIGTAGFTAALSIHRLEEHGLTPERGP-VLVTGATGGVGSLA 166
Query: 174 VGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP---QGIDI 230
V LAK G V S G + + D L+ LG E D +R P Q
Sbjct: 167 VSXLAK-RGYTVEASTGKAAEHDYLRV-LGAKEVLARED-----VXAERIRPLDKQRWAA 219
Query: 231 YFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290
D VGG L L R G +AV G+ P +H + + +++ G + S
Sbjct: 220 AVDPVGGRTLATVLSRXRYGGAVAVSGLTG--GAEVPTTVHP---FILRGVSLLG-IDSV 273
Query: 291 Y--LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
Y L R + + + K ++++ L P A + G+ G+ VVR+A
Sbjct: 274 YCPXDLRLRIWERLAGDLKPDLERIAQEIS--LAELPQALKRILRGELRGRTVVRLA 328
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 22/223 (9%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPN---FKPGDLVAGLT---GWEEYSLIRKTEQLRKIQP 125
PP P+ G +S + P + GD V GL + EY L+ + L
Sbjct: 80 PPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQIL----- 134
Query: 126 DHHIPLSYH-IGLLGMPG--FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
P Y + +P FT +A + GE V + + +G QLA+ G
Sbjct: 135 --PFPKGYDAVKAAALPETFFTVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFG 192
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
V +AGS+ K + + +LG NY E D A +K QG+DI D +G +
Sbjct: 193 AEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDXIGAAYFER 250
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG 285
+ ++ G +++ + NL + KR+T+ G
Sbjct: 251 NIASLAKDGCLSIIAFLGGAVAEK----VNLSPIXVKRLTVTG 289
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 14/229 (6%)
Query: 37 PKGSDSGAFLVKNLYLS---CDPYMRGRMRSSFTSSYIPPFVP-GQPVEGFGVSKVVDSD 92
P+ A +V+N + D Y R + Y PF+P G EG GV + V +
Sbjct: 23 PEAPGPQAVVVRNKAIGLNFIDTYYRSGL-------YPAPFLPSGLGAEGAGVVEAVGDE 75
Query: 93 NPNFKPGDLVAGLTG-WEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHE 151
FK GD VA TG YS + + ++ + L+ + G T +
Sbjct: 76 VTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALM-LKGLTVQYLLRQ 134
Query: 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYN 211
K GE + AA+G VG L Q AK G ++G+ S +K K LG E +Y+
Sbjct: 135 TYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYS 193
Query: 212 DETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVS 260
E L+ + + +D VG + +L ++ G + G S
Sbjct: 194 HEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNAS 242
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202
TA+ H V + ++G+YV + A VG QL ++ G + +AGS +K+ + KL
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKL 190
Query: 203 GFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259
G FNY E A LK G+++ D +GG + + + GR + G++
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM 247
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202
TA+ H V + ++G+YV + A VG QL ++ G + +AGS +K+ + KL
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKL 206
Query: 203 GFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259
G FNY E A LK G+++ D +GG + + + GR + G++
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM 263
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 12/199 (6%)
Query: 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-GFDEAF--NYND 212
+ GE V + + SG VGQ +A GC V + GS++K L+ + DE N D
Sbjct: 1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRD 1725
Query: 213 ETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHN 272
+ L+ +G+D+ +++ E L A++ + HGR G L + H
Sbjct: 1726 TSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALG---- 1781
Query: 273 LFTLVTKRITMKGFLQSDYLH----LYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAF 328
+ K +T G L + + + + ++G + ++ AAF
Sbjct: 1782 -MAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAF 1840
Query: 329 VGLFSGKNVGKQVVRVACE 347
+ GK++GK V++V E
Sbjct: 1841 RYMAQGKHIGKVVIQVREE 1859
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 31/176 (17%)
Query: 91 SDNPNFKPGDLVAGLTGWEEY-------------SLIRKTEQLRKIQPDHHIPLSYHIGL 137
SD N GD V G+ G+ ++ ++I+K E+L +Q
Sbjct: 84 SDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQA----------AS 133
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
L G TA ++ K G+ V + A +G VG L QLAK G V+ +A S++
Sbjct: 134 LPTAGLTALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA--SKRNHA 190
Query: 198 LKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRI 253
LG ++ NY++E L+A +D D VGG++ ++ +++ G I
Sbjct: 191 FLKALGAEQCINYHEEDFLLA-----ISTPVDAVIDLVGGDVGIQSIDCLKETGCI 241
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 19/195 (9%)
Query: 129 IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS 188
IPL++ TA+ + + G+ V V AA V Q+AKL G V+ +
Sbjct: 147 IPLTF---------LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIAT 197
Query: 189 AGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVGGEMLDAALLNM 247
AGS K+ K LG DE NY D ++R +G D D+ G + +
Sbjct: 198 AGSEDKLRRAK-ALGADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKAT 255
Query: 248 RDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYP--RFLDYVISN 305
+ GRIA+ G S + +G + +++++ G + L+P RF++
Sbjct: 256 ANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK 310
Query: 306 YKQGKIVYVEDMNEG 320
G+++ +E EG
Sbjct: 311 PVVGQVLPLEAAAEG 325
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 108/268 (40%), Gaps = 21/268 (7%)
Query: 88 VVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGL-----LGMPG 142
VV S++P F GD V + S + + D +PL ++ L G G
Sbjct: 73 VVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGTAG 132
Query: 143 FTAYAGFHEV----CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 198
FTA H + SP+ G + A G G V L K G VV S G+ + D L
Sbjct: 133 FTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNK-RGYDVVASTGNREAADYL 191
Query: 199 KNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGM 258
K +LG E + D D LK Q D VGG+ L + L ++ G +AV G+
Sbjct: 192 K-QLGASEVISREDVYD--GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGL 248
Query: 259 VSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPR--FLDYVISNYKQGKIVYVED 316
++ + + +++ G + S Y R + S+ K +++ + D
Sbjct: 249 TGGGEVP-----ATVYPFILRGVSLLG-IDSVYCPXDVRAAVWERXSSDLKPDQLLTIVD 302
Query: 317 MNEGLENAPAAFVGLFSGKNVGKQVVRV 344
LE P A + + G+ +V++
Sbjct: 303 REVSLEETPGALKDILQNRIQGRVIVKL 330
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 112/292 (38%), Gaps = 30/292 (10%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKT--EQLRKIQPDHHIP 130
P VPG E G+ + + ++ GD V + ++ + T E + KI D
Sbjct: 61 PLVPG--FECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFS 118
Query: 131 LSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 190
M TAY EV + + G V V +A G VGQ V QL V
Sbjct: 119 ---EAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA 175
Query: 191 SSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDH 250
S+ K + +K+ + F+ N D V +KR +G+DI D + G+ L ++
Sbjct: 176 STFKHEAIKDSV--THLFDRN--ADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPL 231
Query: 251 GRIAVCGMVSL------------HSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPR- 297
G + G ++ S+ + + N L + + GF + L R
Sbjct: 232 GTYILYGSSNMVTGETKSFFSFAKSWWQVEKV-NPIKLYEENKVIAGFSLLNLLFKQGRA 290
Query: 298 -----FLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
++ +I Y Q KI V D LE A + N+GK ++ V
Sbjct: 291 GLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV 342
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 22/243 (9%)
Query: 55 DPYMRGRMRSSFTSSYIPPFVP-GQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSL 113
D Y+R + Y PP +P G E G+ V S + K GD V S
Sbjct: 44 DTYIRSGL-------YPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVV-----YAQSA 91
Query: 114 IRKTEQLRKIQPDHHIPLSYHIGLLG-----MPGFTAYAGFHEVCSPKSGEYVFVSAASG 168
+ + I D L I + G T Y + K E AA+G
Sbjct: 92 LGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAG 151
Query: 169 AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQG 227
VG + Q AK G ++G+ G++QK K G + NY +E DLV LK +
Sbjct: 152 GVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKK 209
Query: 228 IDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLF-TLVTKRITMKGF 286
+ + +D+VG + + +L ++ G + G S GI N +L R +++G+
Sbjct: 210 VRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGY 269
Query: 287 LQS 289
+ +
Sbjct: 270 ITT 272
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 110/280 (39%), Gaps = 48/280 (17%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVA-------------GLTGWEE-------- 110
PPF+PG EG G V S + K GD V L GWE
Sbjct: 80 PPFIPGH--EGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNT 137
Query: 111 -YSLIRKTEQLRKIQPDH--HIPLSY---HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVS 164
YS+ + P+ H+P + I + G T Y G +V K G++V +S
Sbjct: 138 GYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGL-KVTDTKPGDWVVIS 196
Query: 165 AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF 224
G +G + Q A+ G V +K+DL + +LG N D A +++
Sbjct: 197 GI-GGLGHMAVQYARAMGLNVAAVDIDDRKLDLAR-RLGATVTVNAKTVADPAAYIRKET 254
Query: 225 PQGID-IYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283
G + V + + AL G +A G VSL+ ++F +V +T+
Sbjct: 255 DGGAQGVLVTAVSPKAFEQAL------GMVARGGTVSLNGLPPGDFPLSIFNMVLNGVTV 308
Query: 284 KGFLQSDYLHLYPRFLDY-----VISNYKQGKIVYVEDMN 318
+G + L L LD+ V + + GK+ ED+N
Sbjct: 309 RGSIVGTRLDLQ-ESLDFAADGKVKATIQTGKL---EDIN 344
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 29/308 (9%)
Query: 27 IKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86
+++ ++L A +GSD VK L +P ++ ++ P V G EG
Sbjct: 42 VELKNLELAAVRGSD---VRVKMLAAPINPSDINMIQGNYGLLPELPAVGGN--EGVAQV 96
Query: 87 KVVDSDNPNFKPGDLV----AGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPG 142
V S+ KPGD V AGL W ++ + E L IQ IPL LG+
Sbjct: 97 VAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSE-EAL--IQVPSDIPLQ-SAATLGVNP 152
Query: 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202
TAY + + G+ V +A++ VGQ V Q+A G + + L ++L
Sbjct: 153 CTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRL 212
Query: 203 GFDEAFNYNDETDLVAALKRCF----PQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGM 258
A + E +L + F PQ + + VGG+ L + G + G
Sbjct: 213 KSLGAEHVITEEELRRPEMKNFFKDMPQP-RLALNCVGGKSSTELLRQLARGGTMVTYGG 271
Query: 259 VSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMN 318
++ + ++ L+ K + ++GF S + D+ +K+ + + +
Sbjct: 272 MAKQPV-----VASVSLLIFKDLKLRGFWLSQWKK------DHSPDQFKELILTLCDLIR 320
Query: 319 EGLENAPA 326
G APA
Sbjct: 321 RGQLTAPA 328
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 29/308 (9%)
Query: 27 IKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86
+++ ++L A +GSD VK L +P ++ ++ P V G EG
Sbjct: 29 VELKNLELAAVRGSD---VRVKMLAAPINPSDINMIQGNYGLLPELPAVGGN--EGVAQV 83
Query: 87 KVVDSDNPNFKPGDLV----AGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPG 142
V S+ KPGD V AGL W ++ + E L IQ IPL LG+
Sbjct: 84 VAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSE-EAL--IQVPSDIPLQ-SAATLGVNP 139
Query: 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202
TAY + + G+ V +A++ VGQ V Q+A G + + L ++L
Sbjct: 140 CTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRL 199
Query: 203 GFDEAFNYNDETDLVAALKRCF----PQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGM 258
A + E +L + F PQ + + VGG+ L + G + G
Sbjct: 200 KSLGAEHVITEEELRRPEMKNFFKDMPQP-RLALNCVGGKSSTELLRQLARGGTMVTYGG 258
Query: 259 VSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMN 318
++ + ++ L+ K + ++GF S + D+ +K+ + + +
Sbjct: 259 MAKQPV-----VASVSLLIFKDLKLRGFWLSQWKK------DHSPDQFKELILTLCDLIR 307
Query: 319 EGLENAPA 326
G APA
Sbjct: 308 RGQLTAPA 315
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKN 200
TAY ++ + GE + V +A+G VG QLA+ G Y S Q V+L +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSRE 390
Query: 201 KLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGR 252
L ++ + L +G+D+ +++ GE DA+L + GR
Sbjct: 391 HLASSRTCDFEQQF-----LGATGGRGVDVVLNSLAGEFADASLRMLPRGGR 437
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 107/275 (38%), Gaps = 47/275 (17%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE--EYSLIRKTEQLRKIQPDHHIP 130
P +PG G V S++P F G V LTGW E E+ R ++ D +
Sbjct: 58 PXIPGIDFAG----TVHASEDPRFHAGQEVL-LTGWGVGENHWGGLAERAR-VKGDWLVA 111
Query: 131 L-----SYHIGLLGMPGFTAYAGFHEV----CSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
L S + ++G GFTA + P+ GE V V+ ASG VG L
Sbjct: 112 LPAGLSSRNAXIIGTAGFTAXLCVXALEDAGIRPQDGE-VVVTGASGGVGSTAVALLHKL 170
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
G V +G LK+ LG + + ++ + K+ + ID VG ++L
Sbjct: 171 GYQVAAVSGRESTHGYLKS-LGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLA 225
Query: 242 AALLNMRDHGRIAVCGMV---SLHSYHDP--------QGIHNLFTLVTKRITMKGFLQSD 290
L G +A CG+ +L + P QG+ ++ T +R L D
Sbjct: 226 KVLAQXNYGGCVAACGLAGGFALPTTVXPFILRNVRLQGVDSVXTPPARRAEAWARLVKD 285
Query: 291 Y-------------LHLYPRFLDYVISNYKQGKIV 312
L P+F D +I+N QG+ +
Sbjct: 286 LPESFYAQAATEITLADAPKFADAIINNQVQGRTL 320
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 139 GMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 198
G+ TA+ EV GE V + +A+G VG +AK+ G + +AGS K ++L
Sbjct: 20 GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79
Query: 199 KNKLGFD-----EAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGR 252
++LG + + ++ DE L+ G+D+ +++ GE + + + GR
Sbjct: 80 -SRLGVEYVGDSRSVDFADEI-----LELTDGYGVDVVLNSLAGEAIQRGVQILAPGGR 132
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 19/190 (10%)
Query: 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDL 216
+G +V +S A+G +G L Q AK G V+G G K +L ++ +G + ++ E D+
Sbjct: 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDI 227
Query: 217 VAALKRCFPQGIDIYFD-NVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQG---IHN 272
V A+ + G + +V ++A+ +R +G + GM P G +
Sbjct: 228 VGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM--------PAGAKCCSD 279
Query: 273 LFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLF 332
+F V K I++ G + LD+ + I V GL P + +
Sbjct: 280 VFNQVVKSISIVGSYVGNRADTR-EALDFFARGLVKSPIKVV-----GLSTLPEIYEKME 333
Query: 333 SGKNVGKQVV 342
G+ VG+ VV
Sbjct: 334 KGQIVGRYVV 343
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 22/197 (11%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG---LTGWEEYSLIRKTEQLR---KIQP 125
PPFVPG +E GV + + KPGD V + G+ E + + L ++
Sbjct: 78 PPFVPG--IETAGVVRSA-PEGSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDD 134
Query: 126 DHHIPL--SYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183
+ L +YH T Y + ++GE V V A+G +G Q+AK G
Sbjct: 135 AEAVALIANYH---------TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA 185
Query: 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAA 243
V+ + + +K+ +G D +E A + G+D+ D +GG D A
Sbjct: 186 KVIAVVNRTAATEFVKS-VGADIVLPL-EEGWAKAVREATGGAGVDMVVDPIGGPAFDDA 243
Query: 244 LLNMRDHGRIAVCGMVS 260
+ + GR+ V G +
Sbjct: 244 VRTLASEGRLLVVGFAA 260
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 34/183 (18%)
Query: 107 GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSP-----KSGEYV 161
G E +L++ + + K PDH LS+ PG + ++ S K G+ V
Sbjct: 180 GLAEIALVKSNQLMPK--PDH---LSWEEA--AAPGLVNSTAYRQLVSRNGAGMKQGDNV 232
Query: 162 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL----------KNKLGF----DEA 207
+ ASG +G Q A G + S QK ++ +N G+ DE
Sbjct: 233 LIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDE- 291
Query: 208 FNYNDETDLVAALKRCFP----QGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVS--L 261
N D + KR + IDI F++ G E A++ R G I C S +
Sbjct: 292 -NTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYM 350
Query: 262 HSY 264
H Y
Sbjct: 351 HEY 353
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 142 GFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK 201
G TA+ E ++G+ V V +G V Q+AK G V+ ++ S +K+D
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 202 LGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSL 261
LG D N +E + +G D + GG L +L + GRI+V G++
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 262 HSYHDPQGIHNLFTLVTKRITM 283
P G L + V + I++
Sbjct: 292 FEVSGPVGPLLLKSPVVQGISV 313
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 85/223 (38%), Gaps = 40/223 (17%)
Query: 74 FVPGQPVEGFGVSKVVDS----DNPNFKPGDLVAGLT----GWEEYSLIRKTEQLRKIQP 125
+ PG V +S ++S D+ P + G G E +L+ KT QL +P
Sbjct: 157 WQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGLAEIALV-KTNQLMP-KP 214
Query: 126 DHHIPLSYHIGLLGMPGFTAYAGFHEVCSP-----KSGEYVFVSAASGAVGQLVGQLAKL 180
H L++ PG + ++ S K G+ V + ASG +G Q A
Sbjct: 215 KH---LTWEEA--AAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQFALA 269
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE---------TDLVAALKR--------C 223
G + S QK ++ ++ +G + + N E T KR
Sbjct: 270 GGANPICVVSSPQKAEICRS-MGAEAIIDRNAEGYKFWKDEHTQDPKEWKRFGKRIRELT 328
Query: 224 FPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVS--LHSY 264
+ IDI F++ G E A++ R G I C S +H Y
Sbjct: 329 GGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGYMHEY 371
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 15/144 (10%)
Query: 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202
TA+ G + + G+ V + G VG + Q+A G V +A S ++ +++ L
Sbjct: 136 ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGS-DLEYVRD-L 193
Query: 203 GFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVC-GMVSL 261
G + D A + QG D+ +D +GG +LDA+ ++ G + C G
Sbjct: 194 GATPIDASREPEDYAA--EHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGW--- 248
Query: 262 HSYHDPQGIHNLFTLVTKRITMKG 285
G H L L K+ T G
Sbjct: 249 -------GTHKLAPLSFKQATYSG 265
>pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii
Length = 488
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 176 QLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGID------ 229
++ ++ Y+VG + K GFD FN+ ++A K FP G +
Sbjct: 221 EIEEVKPVYLVGEVWDISETVAPYFKYGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHI 280
Query: 230 --IYFDNVG-GEMLDAALLNMRDHGRI 253
+Y VG G +DA L D RI
Sbjct: 281 YGVYDREVGFGNYIDAPFLTNHDQNRI 307
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 20/196 (10%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTG---WEEYSLIRKTEQLRKIQPDHHI 129
P +PG EG G+ + V + G V L G W+EY K D +
Sbjct: 63 PNIPGY--EGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYV---------KTSADFVV 111
Query: 130 PL-----SYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
P+ + + + TA+ E + + + + V+A A+G L QL+++
Sbjct: 112 PIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFR 171
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
++ +++ + L +LG + + ++ G D D++GG +
Sbjct: 172 LIAVTRNNKHTEELL-RLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELA 230
Query: 245 LNMRDHGRIAVCGMVS 260
++R +G G++S
Sbjct: 231 FSLRPNGHFLTIGLLS 246
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK--------VDLLKNKLGFDEA 207
K G+ V + ASG +G Q K G V S+QK DL+ N+
Sbjct: 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGIT 278
Query: 208 FNYNDETDLVAALKRCFPQGI--------DIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259
+ D+ V R + + DI F++ G +++ R G + CG
Sbjct: 279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSS 338
Query: 260 S--LHSYHD 266
S LH++ +
Sbjct: 339 SGYLHTFDN 347
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
pdb|3VTA|B Chain B, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
Length = 621
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 132 SYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191
SYHIG PG +V P+ AS A G LV Q A L+G + + G
Sbjct: 73 SYHIGRPISPG--------DVNGPRDTNGHGTHTASTAAGGLVSQ-ANLYGLGLGTARGG 123
Query: 192 SQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237
+ K+ +++ + +TD++AA G+DI +VGG
Sbjct: 124 VPLARIAAYKVCWNDGCS---DTDILAAYDDAIADGVDIISLSVGG 166
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ 124
++ + PPF+PG V G + + P + VA G +L+ E L +
Sbjct: 48 AYLTRLHPPFIPGMEVVGVVEGRRYAALVPQGGLAERVAVPKG----ALLPLPEGLSP-E 102
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
P+S+ TAY + + GE V V AA+GA+G Q+A+ G
Sbjct: 103 EAAAFPVSF---------LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLR 152
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
V+ +A +K+ L LG +EA Y + + A G+D+ + G E+ ++
Sbjct: 153 VLAAASRPEKLA-LPLALGAEEAATYAEVPERAKAWG-----GLDLVLEVRGKEVEES-- 204
Query: 245 LNMRDHG 251
L + HG
Sbjct: 205 LGLLAHG 211
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ 124
++ + PPF+PG V G + + P + VA G +L+ E L +
Sbjct: 48 AYLTRLHPPFIPGMEVVGVVEGRRYAALVPQGGLAERVAVPKG----ALLPLPEGLSP-E 102
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
P+S+ TAY + + GE V V AA+GA+G Q+A+ G
Sbjct: 103 EAAAFPVSF---------LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLR 152
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
V+ +A +K+ L LG +EA Y + + A G+D+ + G E+ ++
Sbjct: 153 VLAAASRPEKLA-LPLALGAEEAATYAEVPERAKAWG-----GLDLVLEVRGKEVEES-- 204
Query: 245 LNMRDHG 251
L + HG
Sbjct: 205 LGLLAHG 211
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202
TAY + + GE V V AA+GA+G Q+A+ G V+ +A +K+ L L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLA-LPLAL 169
Query: 203 GFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHG 251
G +EA Y + + A G+D+ + G E+ ++ L + HG
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLEVRGKEVEES--LGLLAHG 211
>pdb|2AEE|A Chain A, Crystal Structure Of Orotate Phosphoribosyltransferase
From Streptococcus Pyogenes
pdb|2AEE|B Chain B, Crystal Structure Of Orotate Phosphoribosyltransferase
From Streptococcus Pyogenes
Length = 211
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 234 NVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRIT----------- 282
+ GG +LDAA R+ V G+V++ +Y P+ N K IT
Sbjct: 128 STGGSVLDAAAAASREGAD--VLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVA 185
Query: 283 -MKGFLQSDYLHLYPRFLDYVISNYKQ 308
++G++ +D LHL +F + + N++Q
Sbjct: 186 KLQGYITNDGLHLLKKFKEDQV-NWQQ 211
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYN 211
+ P +G ++ A G +G L +AK G Y V + S+ L K+G D N
Sbjct: 162 LAGPIAGRSTLITGA-GPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPF 220
Query: 212 DETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGM 258
+E + + G++++ + G + L+ L + GR+++ G+
Sbjct: 221 EEDPVKFVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGL 268
>pdb|3V0A|B Chain B, 2.7 Angstrom Crystal Structure Of BontAI IN COMPLEX WITH
NTNHA
pdb|3V0B|B Chain B, 3.9 Angstrom Crystal Structure Of BontAI IN COMPLEX WITH
NTNHA
Length = 1196
Score = 28.5 bits (62), Expect = 5.3, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 283 MKGFLQSDYLHL-YPRFLDYVISNYKQGKI---VYVEDMNEGLENAPAAFVGLFSGKNV 337
+K F + Y + YP +Y I+ + G+I + + D N+ + N P + L +G NV
Sbjct: 357 LKHFYRKQYYKIDYPE--NYSINGFVNGQINAQLSLSDRNQDIINKPEEIINLLNGNNV 413
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase
Sap
pdb|3FAX|A Chain A, The Crystal Structure Of Gbs Pullulanase Sap In Complex
With Maltotetraose
Length = 877
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 58 MRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFK---PGDLVAGLTGWEEYSL 113
+R ++S F + P F+ G P G+ K + + NF+ PGD+V + + +L
Sbjct: 520 IRNSLKSGFPNEGTPAFITGGPQSLQGIFKNIKAQPGNFEADSPGDVVQYIAAHDNLTL 578
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,040,401
Number of Sequences: 62578
Number of extensions: 492290
Number of successful extensions: 1077
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 977
Number of HSP's gapped (non-prelim): 54
length of query: 347
length of database: 14,973,337
effective HSP length: 100
effective length of query: 247
effective length of database: 8,715,537
effective search space: 2152737639
effective search space used: 2152737639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)