Your job contains 1 sequence.
>019013
MEVVTHQRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAV
YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASP
DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT
FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSY
LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMV
YIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019013
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 1658 1.5e-170 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 1104 7.6e-112 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 1104 7.6e-112 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 1101 1.6e-111 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 1101 1.6e-111 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 1100 2.0e-111 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 1096 5.3e-111 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 1070 3.0e-108 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 1054 1.5e-106 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 988 1.5e-99 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 973 5.8e-98 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 953 7.6e-96 1
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 877 8.6e-88 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 790 1.4e-78 1
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 747 5.1e-74 1
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 687 1.2e-67 1
GENEDB_PFALCIPARUM|MAL8P1.43 - symbol:MAL8P1.43 "u5 snrnp... 550 3.8e-53 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 469 1.5e-44 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 458 2.2e-43 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 458 2.2e-43 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 458 2.2e-43 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 458 2.2e-43 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 457 2.8e-43 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 457 2.8e-43 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 456 3.5e-43 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 448 2.5e-42 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 437 3.6e-41 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 437 3.6e-41 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 421 1.8e-39 1
UNIPROTKB|Q9NSS8 - symbol:DKFZp434D199 "Putative uncharac... 408 4.3e-38 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 392 2.1e-36 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 376 1.1e-34 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 367 2.5e-32 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 351 4.7e-32 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 351 4.7e-32 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 348 9.8e-32 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 345 2.0e-31 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 344 2.6e-31 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 342 4.2e-31 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 342 4.2e-31 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 341 5.4e-31 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 340 6.9e-31 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 340 6.9e-31 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 337 1.4e-30 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 332 4.9e-30 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 331 6.2e-30 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 325 3.9e-29 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 320 9.1e-29 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 318 2.4e-28 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 319 3.1e-28 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 317 3.9e-28 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 313 9.2e-28 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 325 1.2e-27 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 309 2.4e-27 1
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 313 3.1e-27 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 307 1.1e-26 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 303 1.1e-26 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 302 1.5e-26 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 298 1.9e-26 1
DICTYBASE|DDB_G0275323 - symbol:tipD "autophagy protein 1... 305 2.1e-26 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 301 2.2e-26 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 300 2.5e-26 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 299 3.6e-26 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 299 3.8e-26 1
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 298 4.0e-26 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 302 4.3e-26 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 295 4.4e-26 1
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 282 4.5e-26 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 296 7.9e-26 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 294 8.1e-26 1
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 292 8.4e-26 1
ASPGD|ASPL0000008575 - symbol:AN6217 species:162425 "Emer... 298 1.2e-25 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 291 2.7e-25 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 293 3.5e-25 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 283 7.6e-25 1
UNIPROTKB|F1MBS9 - symbol:CDC40 "Uncharacterized protein"... 270 9.5e-25 2
UNIPROTKB|F1RSY9 - symbol:CDC40 "Uncharacterized protein"... 270 9.5e-25 2
MGI|MGI:1918963 - symbol:Cdc40 "cell division cycle 40" s... 270 9.5e-25 2
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 289 9.7e-25 1
UNIPROTKB|E2RSW2 - symbol:CDC40 "Uncharacterized protein"... 270 1.8e-24 2
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 278 2.6e-24 1
UNIPROTKB|O60508 - symbol:CDC40 "Pre-mRNA-processing fact... 266 2.6e-24 2
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 265 3.4e-24 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 275 5.3e-24 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 275 5.3e-24 1
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 281 6.5e-24 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 274 7.8e-24 1
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 276 1.2e-23 1
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 278 1.6e-23 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 273 3.5e-23 1
RGD|1307063 - symbol:Cdc40 "cell division cycle 40" speci... 270 4.2e-23 1
UNIPROTKB|F1LMQ0 - symbol:Cdc40 "Protein Cdc40" species:1... 270 4.4e-23 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 274 4.6e-23 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 267 4.7e-23 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 275 4.7e-23 1
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 266 4.8e-23 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 274 4.9e-23 1
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 265 6.1e-23 1
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 265 6.1e-23 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 272 7.2e-23 1
WARNING: Descriptions of 1799 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 1658 (588.7 bits), Expect = 1.5e-170, P = 1.5e-170
Identities = 301/347 (86%), Positives = 326/347 (93%)
Query: 1 MEVVTHQRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAV 60
ME+++ RENE ALS RPMEWSTVP+SA Q PGPNGK RTSSLE+PIMLL+GH SAV
Sbjct: 1 MEIMS--RENETALS--GPRPMEWSTVPHSASQGPGPNGKNRTSSLEAPIMLLSGHPSAV 56
Query: 61 YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASP 120
YTMKFNPAGT+IASGSHDR+IFLW VHGDCKNFMVLKGHKNAILDLHWT+DGSQI+SASP
Sbjct: 57 YTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASP 116
Query: 121 DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT 180
DKT+RAWDVETGKQIKKMAEH+SFVNSCCP+RRGPPL++SGSDDGTAKLWDMRQRGAIQT
Sbjct: 117 DKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQT 176
Query: 181 FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSY 240
FPDKYQITAVSFSDA+DKI+TGG+DNDVKVWDLRKGE +MTL+GHQD ITGMSLSPDGSY
Sbjct: 177 FPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSY 236
Query: 241 LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMV 300
LLTNGMD KLC+WDMRPYAPQNRCVKI EGHQHNFEKNLLKC WSPDG+KVTAGSSDRMV
Sbjct: 237 LLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMV 296
Query: 301 YIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+IWDTTSRR +YKLPGHTGSVNE VFH TEP+IGSCSSDK IYLGEI
Sbjct: 297 HIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 192/318 (60%), Positives = 252/318 (79%)
Query: 30 SAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD 89
+AP A G R SSL++PIMLL+GH+ VY KF+P G+ +AS DR I LW+V+GD
Sbjct: 40 AAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Query: 90 CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC 149
C N+ LKGH A+++LH+ TDGS + SAS DKT+ WD ETG+++K++ H SFVNSC
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 159
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVK 209
P+RRGP LV +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+K
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
VWDLR+ +++ T++GH D +TG+SLS +GSYLL+N MD + +WD+RP+AP+ RCVKI +
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT 329
G+ HNFEKNLL+C WSPDGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FH
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD 339
Query: 330 EPVIGSCSSDKQIYLGEI 347
EP+I S SSDK++Y+GEI
Sbjct: 340 EPIILSASSDKRLYMGEI 357
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 57/220 (25%), Positives = 92/220 (41%)
Query: 53 LTGHQSAV---YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA--ILDLH 107
L GH S V Y + P ++ +GS D + LW D + ++ +N +L +
Sbjct: 148 LKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVT 201
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ QIIS D ++ WD+ K M H V S G L+ S + D T
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTV 260
Query: 168 KLWDMRQ-----------RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++WD+R +G + F +K + S+S KI G D V VWD
Sbjct: 261 RVWDVRPFAPKERCVKIFQGNVHNF-EK-NLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ L GH I ++ PD +L+ D +L + +++
Sbjct: 319 RILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 192/318 (60%), Positives = 252/318 (79%)
Query: 30 SAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD 89
+AP A G R SSL++PIMLL+GH+ VY KF+P G+ +AS DR I LW+V+GD
Sbjct: 40 AAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Query: 90 CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC 149
C N+ LKGH A+++LH+ TDGS + SAS DKT+ WD ETG+++K++ H SFVNSC
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 159
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVK 209
P+RRGP LV +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+K
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
VWDLR+ +++ T++GH D +TG+SLS +GSYLL+N MD + +WD+RP+AP+ RCVKI +
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT 329
G+ HNFEKNLL+C WSPDGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FH
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD 339
Query: 330 EPVIGSCSSDKQIYLGEI 347
EP+I S SSDK++Y+GEI
Sbjct: 340 EPIILSASSDKRLYMGEI 357
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 57/220 (25%), Positives = 92/220 (41%)
Query: 53 LTGHQSAV---YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA--ILDLH 107
L GH S V Y + P ++ +GS D + LW D + ++ +N +L +
Sbjct: 148 LKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVT 201
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ QIIS D ++ WD+ K M H V S G L+ S + D T
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTV 260
Query: 168 KLWDMRQ-----------RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++WD+R +G + F +K + S+S KI G D V VWD
Sbjct: 261 RVWDVRPFAPKERCVKIFQGNVHNF-EK-NLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ L GH I ++ PD +L+ D +L + +++
Sbjct: 319 RILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 191/318 (60%), Positives = 252/318 (79%)
Query: 30 SAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD 89
+AP A G R SSL++PIMLL+GH+ VY KF+P G+ +AS DR I LW+V+GD
Sbjct: 40 AAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Query: 90 CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC 149
C N+ LKGH A+++LH+ TDGS + SAS DKT+ WD ETG+++K++ H SFVNSC
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 159
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVK 209
P+RRGP LV +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+K
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
VWDLR+ +++ T++GH D +TG+SLS +GSYLL+N MD + +WD+RP+AP+ RCV+I +
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQ 279
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT 329
G+ HNFEKNLL+C WSPDGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FH
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD 339
Query: 330 EPVIGSCSSDKQIYLGEI 347
EP+I S SSDK++Y+GEI
Sbjct: 340 EPIILSASSDKRLYMGEI 357
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 57/220 (25%), Positives = 92/220 (41%)
Query: 53 LTGHQSAV---YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA--ILDLH 107
L GH S V Y + P ++ +GS D + LW D + ++ +N +L +
Sbjct: 148 LKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVT 201
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ QIIS D ++ WD+ K M H V S G L+ S + D T
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTV 260
Query: 168 KLWDMRQ-----------RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++WD+R +G + F +K + S+S KI G D V VWD
Sbjct: 261 RVWDVRPFAPKERCVRIFQGNVHNF-EK-NLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ L GH I ++ PD +L+ D +L + +++
Sbjct: 319 RILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 191/325 (58%), Positives = 253/325 (77%)
Query: 28 PYSAPQAPGPN-----GKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIF 82
P + PQ P G R SSL++PIMLL+GH+ VY KF+P G+ +AS DR I
Sbjct: 33 PGAGPQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 92
Query: 83 LWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
LW+V+GDC N+ LKGH A+++LH+ TDGS + SAS DKT+ WD ETG+++K++ H
Sbjct: 93 LWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT 152
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG 202
SFVNSC P+RRGP LV +GSDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +G
Sbjct: 153 SFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISG 212
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
GIDND+KVWDLR+ +++ T++GH D +TG+SLS +GSYLL+N MD + +WD+RP+AP+
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 263 RCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN 322
RCVKI +G+ HNFEKNLL+C WSPDGSK+ AGS+DR VY+WDTTSRR+LYKLPGH GS+N
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSIN 332
Query: 323 ESVFHATEPVIGSCSSDKQIYLGEI 347
E FH EP+I S SSDK++Y+GEI
Sbjct: 333 EVAFHPDEPIILSASSDKRLYMGEI 357
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/220 (26%), Positives = 92/220 (41%)
Query: 53 LTGHQSAV---YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA--ILDLH 107
L GH S V Y + P ++ +GS D + LW D + ++ +N +L +
Sbjct: 148 LKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW----DIRKKAAVQTFQNTYQVLAVT 201
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ QIIS D ++ WD+ K M H V S G L+ S + D T
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTV 260
Query: 168 KLWDMRQ-----------RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++WD+R +G + F +K + S+S KI G D V VWD
Sbjct: 261 RVWDVRPFAPKERCVKIFQGNVHNF-EK-NLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
V L GH I ++ PD +L+ D +L + +++
Sbjct: 319 RVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 189/309 (61%), Positives = 248/309 (80%)
Query: 39 GKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKG 98
G R SSL++PIMLL+GH+ VY KF+P G+ +AS DR I LW+V+GDC N+ LKG
Sbjct: 48 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG 107
Query: 99 HKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLV 158
H A+++LH+ TDGS + SAS DKT+ WD ETG+++K++ H SFVNSC P+RRGP LV
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167
Query: 159 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
+GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 227
Query: 219 SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278
+ T++GH D +TG+SLS +GSYLL+N MD + +WD+RP+AP+ RCVKI +G+ HNFEKN
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN 287
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
LL+C WSPDGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FH EP+I S SS
Sbjct: 288 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASS 347
Query: 339 DKQIYLGEI 347
DK++Y+GEI
Sbjct: 348 DKRLYMGEI 356
Score = 160 (61.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 56/220 (25%), Positives = 92/220 (41%)
Query: 53 LTGHQSAV---YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA--ILDLH 107
L GH S V Y + P ++ +GS D + LW D + ++ +N +L +
Sbjct: 147 LKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVT 200
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ QIIS D ++ WD+ K M H V S G L+ S + D T
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTV 259
Query: 168 KLWDMRQ-----------RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++WD+R +G + F +K + S+S KI G D V VWD
Sbjct: 260 RVWDVRPFAPKERCVKIFQGNVHNF-EK-NLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 317
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ L GH I ++ PD +++ D +L + +++
Sbjct: 318 RILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 189/310 (60%), Positives = 247/310 (79%)
Query: 38 NGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK 97
+G R SSL++PIMLL+GH+ VY KF+P G +AS DR I LW+V+GDC N+ LK
Sbjct: 74 SGPPRCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLK 133
Query: 98 GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
GH A+++LH+ TDGS + SAS DKT+ WD ETG+++K++ H SFVNSC P+RRGP L
Sbjct: 134 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 193
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGE 217
V +GSDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ +
Sbjct: 194 VCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 253
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
++ T++GH D +TG+SLS +GSYLL+N MD + IWD+RP+AP+ RCVKI +G+ HNFEK
Sbjct: 254 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEK 313
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
NLL+C WSPDGSK+ GS+DR VY+WDTTSRRILYKLPGH GSVNE FH EP+I S S
Sbjct: 314 NLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSAS 373
Query: 338 SDKQIYLGEI 347
SDK++Y+GEI
Sbjct: 374 SDKRLYMGEI 383
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 55/220 (25%), Positives = 92/220 (41%)
Query: 53 LTGHQSAV---YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA--ILDLH 107
L GH S V Y + P ++ +GS D + LW D + ++ +N +L +
Sbjct: 174 LKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW----DIRKKAAVQTFQNTYQVLAVT 227
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ QIIS D ++ WD+ K M H V S G L+ S + D T
Sbjct: 228 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTV 286
Query: 168 KLWDMRQ-----------RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++WD+R +G + F +K + S+S KI G D V VWD
Sbjct: 287 RIWDVRPFAPKERCVKIFQGNVHNF-EK-NLLRCSWSPDGSKIAGGSADRFVYVWDTTSR 344
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ L GH + ++ P+ +L+ D +L + +++
Sbjct: 345 RILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ 384
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 187/341 (54%), Positives = 256/341 (75%)
Query: 7 QRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFN 66
+R + A+ V + V + Q G R+SSL++PIMLL+GH+ VY KF+
Sbjct: 6 KRVADMAVVPVGVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFH 65
Query: 67 PAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRA 126
P G +AS +DR I +W+V+GDC+N+ LKGH A+++LH+ TDGS + SAS DKT+
Sbjct: 66 PNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCV 125
Query: 127 WDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ 186
WD ETG+++K++ H SFVNSC P+RRGP L +GSDDGT KLWD+R++ ++ TF + YQ
Sbjct: 126 WDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQ 185
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM 246
+ +V+F+D SD+I +GGIDND+KVWDLR+ ++ ++QGH D +TG+SLS DGSYLL+N M
Sbjct: 186 VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSM 245
Query: 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306
D + +WD+RP+AP+ RCVKI +G+ HNFEKNLL+C WS DGSK+ AGS+DR VYIWDTT
Sbjct: 246 DNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTT 305
Query: 307 SRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+RRI+YKLPGH GSVNE FH EP++ S SSDK++Y+GEI
Sbjct: 306 TRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 54/216 (25%), Positives = 89/216 (41%)
Query: 53 LTGHQSAVYTMKFNPAGTVIA-SGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
L GH S V + G +A +GS D + LW + ++ +L + +
Sbjct: 137 LKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQ--VLSVTFNDT 194
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
QIIS D ++ WD+ K I M H V S G L+ S S D + ++WD
Sbjct: 195 SDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL-SNSMDNSVRVWD 253
Query: 172 MRQ-----------RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
+R +G + F +K + S+S KI G D V +WD +
Sbjct: 254 IRPFAPKERCVKIFQGNVHNF-EK-NLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVY 311
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
L GH + ++ P+ +L+ D +L I +++
Sbjct: 312 KLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 180/295 (61%), Positives = 236/295 (80%)
Query: 39 GKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKG 98
G R SSL++PIMLL+GH+ VY KF+P G+ +AS DR I LW+V+GDC N+ LKG
Sbjct: 48 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG 107
Query: 99 HKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLV 158
H A+++LH+ TDGS + SAS DKT+ WD ETG+++K++ H SFVNSC P+RRGP LV
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167
Query: 159 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
+GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 227
Query: 219 SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278
+ T++GH D +TG+SLS +GSYLL+N MD + +WD+RP+AP+ RCVKI +G+ HNFEKN
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN 287
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
LL+C WSPDGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FH EP+I
Sbjct: 288 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 342
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 176/310 (56%), Positives = 229/310 (73%)
Query: 39 GKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKG 98
G +RTS LE PIM L GH+ +Y+ KFN GT +ASG D++IFLW+V+G+C N+ VLKG
Sbjct: 44 GTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKG 103
Query: 99 HKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLV 158
HK IL+LHW+TD ++I +A DK++ WD G+ IK++ EH+ VNSCCP+RRGPPLV
Sbjct: 104 HKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLV 163
Query: 159 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
SGSDD +A+++D R +G+ F KY +T+V FSDASD++ TGGIDN ++VWD+R E
Sbjct: 164 ASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQED 223
Query: 219 SM-TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL HQD IT S+S DG+YLL+N MD IWD+RPYAP NR +K G Q+NFEK
Sbjct: 224 PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEK 283
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
NL+K WS DG ++ GSSDR VYIWDT ++++ Y LPGH+G+VNE FH EP+I SCS
Sbjct: 284 NLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCS 343
Query: 338 SDKQIYLGEI 347
SDK IYLGEI
Sbjct: 344 SDKTIYLGEI 353
Score = 160 (61.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 46/197 (23%), Positives = 88/197 (44%)
Query: 71 VIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE 130
++ASGS DR ++ K L HK + + ++ Q+I+ D +R WD+
Sbjct: 162 LVASGSDDRSARIFDTRS--KGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIR 219
Query: 131 TGKQ-IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA----IQTF---P 182
+ + +A H + S S+ G L+ S S D + K+WD+R I+TF
Sbjct: 220 NQEDPLYTLASHQDTITSTSVSKDGAYLL-SNSMDNSCKIWDIRPYAPPNRNIKTFNGAQ 278
Query: 183 DKYQITAVSFSDASD--KIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSY 240
+ ++ + S + D +I G D V +WD ++ L GH + ++ P+
Sbjct: 279 NNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPI 338
Query: 241 LLTNGMDCKLCIWDMRP 257
+ + D + + +++P
Sbjct: 339 IASCSSDKTIYLGEIKP 355
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 175/319 (54%), Positives = 236/319 (73%)
Query: 30 SAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD 89
+ P A G R SSL++PIMLL+GH+ VY KF+P G+ +AS DR I LW V+GD
Sbjct: 40 ATPGALLQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGD 99
Query: 90 CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC 149
C N+ LKGH A+++LH+ TDGS + SAS DKT+ WD ETG+++K++ H SFVNSC
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 159
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVK 209
P+RRGP LV +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+K
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
VWDLR+ +++ T++GH D +TG+SLS +GSYLL+N MD + +WD+RP+AP+ RCVKI +
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT 329
G+ HNFEKNLL+C WSPDGSK+ AGS+D +Y W + S R L ++P H S E
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQ 339
Query: 330 EPV-IGSCSSDKQIYLGEI 347
E + I S SSDK++Y+GEI
Sbjct: 340 EGIXILSASSDKRLYMGEI 358
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 172/342 (50%), Positives = 236/342 (69%)
Query: 7 QRENENALSTVSARPMEWSTVPYS-APQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
+R N + + A+ + + Y+ +A +G +RTS+L++PIM L GH+ ++T +F
Sbjct: 4 KRPNNSVILAQEAKRSKNDLMAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEF 63
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G ++ S DR I++W V+ DC+N M + GH A+++ H+T DGS I + S DKTL
Sbjct: 64 HPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLA 123
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY 185
WD+ TG++ ++ H +FVNS SRRG L+ SGSDD T K+WD R++ A T +
Sbjct: 124 FWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPF 183
Query: 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
Q+TAV F D +++ +GGIDN+VK+WD+RK V L+GH D ITGMSLSP+G ++LTN
Sbjct: 184 QVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNA 243
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
MD L +WD+RPYAP RCVK+ +GHQHNFEKNLL+C WSP K+T+GS+DR VYIWD
Sbjct: 244 MDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDV 303
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+RRILYKLPGH GSVN F EP+I S SSDK +YLGEI
Sbjct: 304 NTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 156/307 (50%), Positives = 214/307 (69%)
Query: 41 QRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK 100
+RTSSL +P M+L GH +YT +F+ G+ +AS +D+ IFLW+V G+C+NF VLKGHK
Sbjct: 20 KRTSSLMAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHK 79
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
AI+++ + D S ++SA DKT+R WD+ETG I+ H VNS +RRGP ++ S
Sbjct: 80 GAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICS 139
Query: 161 GSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
SDDGT + DMR + A + F KYQ TAV+F+DA+D + GGIDN +KVWD+ + +V
Sbjct: 140 ASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRY 199
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
L GH+D IT +S+S +G++LL+N MDC L WD+RP+ P R V +G HNFEKNLL
Sbjct: 200 VLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLL 259
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
KCGWSP + +TAGS+DR VY+W+ SR +YKLPGH GSVN + H T+ ++ S SDK
Sbjct: 260 KCGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDK 319
Query: 341 QIYLGEI 347
I+LGE+
Sbjct: 320 TIFLGEL 326
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 144/307 (46%), Positives = 203/307 (66%)
Query: 42 RTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
RTS L +PIM LTGH V+ ++F+P IASGS DR I LW+ +G C+N+ +L GHK
Sbjct: 51 RTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHKG 110
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
AILDL W+ D I SAS D TL +WD+E+G++I++ H +NS S+RG ++VS
Sbjct: 111 AILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSA 170
Query: 162 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
SDDGT +WD RQ+ AI + ITAV+ S+A +++++GGIDN + VWD+RK + +
Sbjct: 171 SDDGTMGIWDPRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYS 230
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
+ GH D IT + +SPD LL+N D + WD+RP+AP NR ++ +G EKNL++
Sbjct: 231 MAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIR 290
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT-EPVIGSCSSDK 340
W+P G K+ AGS DR V +WD + +ILYKLPGH G+VN+ F EP+I S SSD+
Sbjct: 291 ASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDR 350
Query: 341 QIYLGEI 347
+ LGE+
Sbjct: 351 NLMLGEL 357
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 139/307 (45%), Positives = 197/307 (64%)
Query: 42 RTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
R SSL++P+M L+GH ++ KFN AG IASGS DR I LW +GDC+N+ +L GH+
Sbjct: 45 RLSSLQAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRG 104
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
AILDL W+ D I SAS D L +WD+ TG++I++ H +NS S+RG ++ SG
Sbjct: 105 AILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSG 164
Query: 162 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
SDDGT +WD R++ A + +TAV+ S+A ++IY+GGIDND+KVWD+RK V
Sbjct: 165 SDDGTIGIWDPRKKHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYN 224
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
+ GH+D IT + +SPD LL+ MD WD+RP+AP R ++ +G EKNL++
Sbjct: 225 MAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVR 284
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFH-ATEPVIGSCSSDK 340
GW +G +V G++D V IW + ++ YKLPGH +VN F TEP+I S SSDK
Sbjct: 285 GGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDK 344
Query: 341 QIYLGEI 347
+ +GE+
Sbjct: 345 TLLVGEL 351
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC---KNFMVLKG-----HKNAIL 104
+ GH+ + T+K +P + S + D W + ++ G KN +
Sbjct: 225 MAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVR 284
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP-PLVVSGSD 163
W +G ++ + D T+ W ETGK K+ H + VN C G PL++SGS
Sbjct: 285 G-GWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVN-CVEFSPGTEPLILSGSS 342
Query: 164 DGTAKLWDMR 173
D T + ++R
Sbjct: 343 DKTLLVGELR 352
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 135/307 (43%), Positives = 190/307 (61%)
Query: 41 QRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK 100
QRTS L P + + GH + V +F+P+G+ ASG DR I LW+V GD KN+ VL G K
Sbjct: 34 QRTSDLNVPNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCK 93
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
AI DL W+ D + +S D L +WD +G++I+K H VN+ + G L+ S
Sbjct: 94 GAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTS 153
Query: 161 GSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
SDD T K+WD R + I+T +KY +TAV+ + +++ GGID +K+WDLR S
Sbjct: 154 VSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSH 213
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
L+GH+D+IT +++S DGS LL+N MD + I+D++P+A R ++I EG H E NLL
Sbjct: 214 VLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLL 273
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
WS + V AGSSD+ VY+W T + Y LPGH GSVN FH + +I SCSSD+
Sbjct: 274 GVAWSRNSRFVGAGSSDKNVYVWSATGD-LRYVLPGHEGSVNHVDFHPHQDIILSCSSDR 332
Query: 341 QIYLGEI 347
I+LGE+
Sbjct: 333 TIFLGEL 339
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 106/308 (34%), Positives = 174/308 (56%)
Query: 40 KQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGH 99
++R + L SP ML+ H+ VY++ F+ G IAS S D I + +V+ +C+ VL+GH
Sbjct: 20 EERKTGLFSPTMLINSHKGEVYSINFSSDGKYIASSSFDMTIMVHNVYNECETIGVLRGH 79
Query: 100 KNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
KNA+L W D + I SAS D L WDVE +++ H++ VN L V
Sbjct: 80 KNAVLQAKWLQDDNYICSASADHKLFLWDVECESKLRSFKGHDNIVNGLDIINHN--LFV 137
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS 219
S SDD T K WD+R + A+ + + +V + ++T +DN +K +D + ++
Sbjct: 138 SCSDDNTLKFWDIRSKWAVHIIKHDFPLLSVCSDKKGEFLFTSCVDNTIKKYDCKNYKLK 197
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
T GH+D ITG+ ++ D + L + D +C WD++P++ + + + L ++N + NL
Sbjct: 198 DTFIGHKDYITGLDINKDETMLASISADESICFWDIQPFSCEEKLLFQLNSPKYNIDYNL 257
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
+K ++ D + + GS D +YI+D + + Y LPGHT ++N+ FH E ++ SCSSD
Sbjct: 258 IKLSFNND-NLLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPVEDIVASCSSD 316
Query: 340 KQIYLGEI 347
I+LGEI
Sbjct: 317 HTIFLGEI 324
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 107/299 (35%), Positives = 171/299 (57%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWT 109
+ L GH +A+ ++KF+P G +AS + D I +W + G+CK L GH I D+ W+
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKK--TLYGHSLEISDVAWS 90
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+D S+++SAS DKTL+ WD+ +GK +K + H+ FV CC L+VSGS D + K+
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFV-FCCDFNPPSNLIVSGSFDESVKI 149
Query: 170 WDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL--QGHQ 226
W+++ ++T I+AV+F+ I +G D ++WD G+ TL +G+
Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
++ + SP+G Y+LT +D L +WD Y+ + RC+K GH++ EK L +S
Sbjct: 210 P-VSFVKFSPNGKYILTATLDNTLKLWD---YS-RGRCLKTYTGHKN--EKYCLFASFSV 262
Query: 287 DGSK-VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQI 342
G K V +GS D MVYIW+ ++ I+ +L GHT V + H T+ +I S + +DK I
Sbjct: 263 TGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTI 321
Score = 157 (60.3 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 39/128 (30%), Positives = 63/128 (49%)
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
+TL GH I+ + SP+G +L ++ D + IW A C K L GH + E +
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWG----AYDGNCKKTLYGH--SLE--I 84
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
WS D S++ + S D+ + +WD S + L L GH+ V F+ +I S S D
Sbjct: 85 SDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 340 KQIYLGEI 347
+ + + E+
Sbjct: 145 ESVKIWEV 152
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 113/347 (32%), Positives = 183/347 (52%)
Query: 3 VVTHQRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYT 62
+ T +++ E A+P S+ S P PN +L+ L GH AV +
Sbjct: 1 MATEEKKPET--EAARAQPTPSSSATQSKPTPVKPN-----YALK---FTLAGHTKAVSS 50
Query: 63 MKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK 122
+KF+P G +AS S D+ I +W + D K + GHK I D+ W++D + ++SAS DK
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP 182
TL+ WDV +GK +K + H+++V CC L+VSGS D + ++WD++ ++T P
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 183 DKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMITGMSLSPDGSY 240
++AV F+ I + D ++WD G+ TL ++ + SP+G Y
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 241 LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRM 299
+L +D L +WD Y+ + +C+K GH++ EK + +S G K + +GS D +
Sbjct: 229 ILAATLDNTLKLWD---YS-KGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 300 VYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYL 344
VYIW+ ++ I+ KL GHT V + H TE +I S + +DK I L
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL GH ++ + SP+G +L ++ D + IW A + K + GH+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----L 88
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ WS D + + + S D+ + IWD +S + L L GH+ V F+ +I S S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 338 SDKQIYLGEI 347
D+ + + ++
Sbjct: 149 FDESVRIWDV 158
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 109/337 (32%), Positives = 176/337 (52%)
Query: 14 LSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIML-LTGHQSAVYTMKFNPAGTVI 72
++T +P + AP A K + L GH AV ++KF+P G +
Sbjct: 1 MATEEKKPETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60
Query: 73 ASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG 132
AS S D+ I +W + D K + GHK I D+ W++D + ++SAS DKTL+ WDV +G
Sbjct: 61 ASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 119
Query: 133 KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVS 191
K +K + H+++V CC L+VSGS D + ++WD++ ++T P ++AV
Sbjct: 120 KCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 178
Query: 192 FSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMITGMSLSPDGSYLLTNGMDCKL 250
F+ I + D ++WD G+ TL ++ + SP+G Y+L +D L
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238
Query: 251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRMVYIWDTTSRR 309
+WD Y+ + +C+K GH++ EK + +S G K + +GS D +VYIW+ ++
Sbjct: 239 KLWD---YS-KGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYL 344
I+ KL GHT V + H TE +I S + +DK I L
Sbjct: 293 IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL GH ++ + SP+G +L ++ D + IW A + K + GH+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----L 88
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ WS D + + + S D+ + IWD +S + L L GH+ V F+ +I S S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 338 SDKQIYLGEI 347
D+ + + ++
Sbjct: 149 FDESVRIWDV 158
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 113/347 (32%), Positives = 183/347 (52%)
Query: 3 VVTHQRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYT 62
+ T +++ E A+P S+ S P PN +L+ L GH AV +
Sbjct: 1 MATEEKKPET--EAARAQPTPSSSATQSKPTPVKPN-----YALK---FTLAGHTKAVSS 50
Query: 63 MKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK 122
+KF+P G +AS S D+ I +W + D K + GHK I D+ W++D + ++SAS DK
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP 182
TL+ WDV +GK +K + H+++V CC L+VSGS D + ++WD++ ++T P
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 183 DKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMITGMSLSPDGSY 240
++AV F+ I + D ++WD G+ TL ++ + SP+G Y
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 241 LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRM 299
+L +D L +WD Y+ + +C+K GH++ EK + +S G K + +GS D +
Sbjct: 229 ILAATLDNTLKLWD---YS-KGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 300 VYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYL 344
VYIW+ ++ I+ KL GHT V + H TE +I S + +DK I L
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL GH ++ + SP+G +L ++ D + IW A + K + GH+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----L 88
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ WS D + + + S D+ + IWD +S + L L GH+ V F+ +I S S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 338 SDKQIYLGEI 347
D+ + + ++
Sbjct: 149 FDESVRIWDV 158
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 113/347 (32%), Positives = 183/347 (52%)
Query: 3 VVTHQRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYT 62
+ T +++ E A+P S+ S P PN +L+ L GH AV +
Sbjct: 1 MATEEKKPET--EAARAQPTPSSSATQSKPTPVKPN-----YALK---FTLAGHTKAVSS 50
Query: 63 MKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK 122
+KF+P G +AS S D+ I +W + D K + GHK I D+ W++D + ++SAS DK
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP 182
TL+ WDV +GK +K + H+++V CC L+VSGS D + ++WD++ ++T P
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 183 DKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMITGMSLSPDGSY 240
++AV F+ I + D ++WD G+ TL ++ + SP+G Y
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 241 LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRM 299
+L +D L +WD Y+ + +C+K GH++ EK + +S G K + +GS D +
Sbjct: 229 ILAATLDNTLKLWD---YS-KGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 300 VYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYL 344
VYIW+ ++ I+ KL GHT V + H TE +I S + +DK I L
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL GH ++ + SP+G +L ++ D + IW A + K + GH+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----L 88
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ WS D + + + S D+ + IWD +S + L L GH+ V F+ +I S S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 338 SDKQIYLGEI 347
D+ + + ++
Sbjct: 149 FDESVRIWDV 158
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 103/297 (34%), Positives = 163/297 (54%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV +KF+P G +AS S D+ I +W + D K + GHK I D+ W++D
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 126
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++S S DKTL+ W++ TGK +K + H+++V CC L+VSGS D + ++WD+
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMIT 230
R ++T P ++AV F+ I + D ++WD G+ TL ++
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 245
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+ SP+G Y+L +D L +WD Y+ + +C+K GH++ EK + +S G K
Sbjct: 246 FVKFSPNGKYILAATLDNTLKLWD---YS-KGKCLKTYTGHKN--EKYCIFANFSVTGGK 299
Query: 291 -VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYL 344
+ +GS D MVYIW+ S+ ++ KL GHT +V + H TE +I S + +DK I L
Sbjct: 300 WIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKL 356
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/130 (24%), Positives = 62/130 (47%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL GH ++ + SP+G +L ++ D + IW A + K + GH+
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----L 115
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ WS D + +GS D+ + +W+ ++ + L L GH+ V F+ +I S S
Sbjct: 116 GISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 175
Query: 338 SDKQIYLGEI 347
D+ + + ++
Sbjct: 176 FDESVRIWDV 185
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW-HVHGDC-KNFMVLKGHKNAILDLHWT 109
L+ V +KF+P G I + + D + LW + G C K + K K I
Sbjct: 236 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 295
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFV--NSCCPSRRGPPLVVSGS--DDG 165
T G I+S S D + W++++ + ++K+ H V +C P+ ++ S + +D
Sbjct: 296 TGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTEN---IIASAALENDK 352
Query: 166 TAKLW 170
T KLW
Sbjct: 353 TIKLW 357
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 112/341 (32%), Positives = 179/341 (52%)
Query: 9 ENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPA 68
E + A+P S+ S P PN +L+ L GH AV ++KF+P
Sbjct: 5 EKKPETEAARAQPTPSSSATQSKPTPVKPN-----YALK---FTLAGHTKAVSSVKFSPN 56
Query: 69 GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128
G +AS S D+ I +W + D K + GHK I D+ W++D + ++SAS DKTL+ WD
Sbjct: 57 GEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 115
Query: 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-I 187
V +GK +K + H+++V CC L+VSGS D + ++WD++ ++T P +
Sbjct: 116 VSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174
Query: 188 TAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMITGMSLSPDGSYLLTNGM 246
+AV F+ I + D ++WD G+ TL ++ + SP+G Y+L +
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 234
Query: 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRMVYIWDT 305
D L +WD Y+ + +C+K GH++ EK + +S G K + +GS D +VYIW+
Sbjct: 235 DNTLKLWD---YS-KGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYL 344
++ I+ KL GHT V + H TE +I S + +DK I L
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL GH ++ + SP+G +L ++ D + IW A + K + GH+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----L 88
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ WS D + + + S D+ + IWD +S + L L GH+ V F+ +I S S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 338 SDKQIYLGEI 347
D+ + + ++
Sbjct: 149 FDESVRIWDV 158
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 103/297 (34%), Positives = 165/297 (55%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV ++KF+P G +AS S D+ I +W + D K + GHK I D+ W++D
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 73
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+ ++SAS DKTL+ WDV +GK +K + H+++V CC L+VSGS D + ++WD+
Sbjct: 74 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDV 132
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMIT 230
+ ++T P ++AV F+ I + D ++WD G+ TL ++
Sbjct: 133 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 192
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+ SP+G Y+L +D L +WD Y+ + +C+K GH++ EK + +S G K
Sbjct: 193 FVKFSPNGKYILAATLDNTLKLWD---YS-KGKCLKTYTGHKN--EKYCIFANFSVTGGK 246
Query: 291 -VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYL 344
+ +GS D +VYIW+ ++ I+ KL GHT V + H TE +I S + +DK I L
Sbjct: 247 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 303
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL GH ++ + SP+G +L ++ D + IW A + K + GH+
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----L 62
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ WS D + + + S D+ + IWD +S + L L GH+ V F+ +I S S
Sbjct: 63 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 122
Query: 338 SDKQIYLGEI 347
D+ + + ++
Sbjct: 123 FDESVRIWDV 132
Score = 122 (48.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 36/125 (28%), Positives = 58/125 (46%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW-HVHGDC-KNFMVLKGHKNAILDLHWT 109
L+ V +KF+P G I + + D + LW + G C K + K K I
Sbjct: 183 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 242
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNS--CCPSRRGPPLVVSGS--DDG 165
T G I+S S D + W+++T + ++K+ H V S C P+ ++ S + +D
Sbjct: 243 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN---IIASAALENDK 299
Query: 166 TAKLW 170
T KLW
Sbjct: 300 TIKLW 304
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 107/339 (31%), Positives = 181/339 (53%)
Query: 14 LSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIML---LTGHQSAVYTMKFNPAGT 70
++T +P ++ S P + N + + + ++ L L GH AV ++KF+P G
Sbjct: 1 MATEEKKPETEASKTQSTPSSS--NNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGE 58
Query: 71 VIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE 130
+AS S D+ I +W + D K + GHK I D+ W++D + ++SAS DKTL+ WDV
Sbjct: 59 WLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 117
Query: 131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITA 189
+GK +K + H+++V CC L+VSGS D + ++WD++ ++T P ++A
Sbjct: 118 SGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 190 VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMITGMSLSPDGSYLLTNGMDC 248
V F+ I + D ++WD G+ TL ++ + SP+G Y+L +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 249 KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRMVYIWDTTS 307
L +WD Y+ + +C+K H++ EK + +S G K + +GS D +VYIW+ +
Sbjct: 237 TLKLWD---YS-KGKCLKTYTCHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 308 RRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYL 344
+ ++ KL GHT V + H TE +I S + +DK I L
Sbjct: 291 KEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ TL GH ++ + SP+G +L ++ D + IW A + K + GH+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----L 88
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ WS D + + + S D+ + IWD +S + L L GH+ V F+ +I S S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 338 SDKQIYLGEI 347
D+ + + ++
Sbjct: 149 FDESVRIWDV 158
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 101/326 (30%), Positives = 173/326 (53%)
Query: 28 PYSAPQAPGPN--GKQRTSSLESPIML-LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
P ++ Q P PN G + S +M L GH ++ + KF+P G + + S D+ + +W
Sbjct: 55 PGASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW 114
Query: 85 HV-HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS 143
++ H C+ L GHK + D+ W++D ++SAS DKTL+ +++ T + K + HN+
Sbjct: 115 NMDHMICER--TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNN 172
Query: 144 FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTG 202
+V CC LVVSGS D + ++WD++ I+T P ++AVSF+ I +G
Sbjct: 173 YV-FCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG 231
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDM-ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ 261
D V++WD G+ TL ++ + + SP+G Y+L + +D L +WD +
Sbjct: 232 SYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFS----K 287
Query: 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRMVYIWDTTSRRILYKLPGHTGS 320
+ +K GH+++ K + +S G K + +GS D +YIW+ +R I+ L GHT
Sbjct: 288 GKTLKQYTGHENS--KYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQP 345
Query: 321 VNESVFHATEPVI--GSCSSDKQIYL 344
V S H + +I G+ D +I++
Sbjct: 346 VLASDCHPVQNIIASGALEPDNKIHI 371
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/127 (27%), Positives = 57/127 (44%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL+GH I+ SP G YL T+ D + IW+M C + L GH+
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMI----CERTLTGHKLGVND--- 134
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
WS D V + S D+ + I++ + R+ L GH V F+ ++ S S D+
Sbjct: 135 -IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDE 193
Query: 341 QIYLGEI 347
+ + ++
Sbjct: 194 SVRIWDV 200
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 101/326 (30%), Positives = 173/326 (53%)
Query: 28 PYSAPQAPGPN--GKQRTSSLESPIML-LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
P ++ Q P PN G + S +M L GH ++ + KF+P G + + S D+ + +W
Sbjct: 55 PGASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW 114
Query: 85 HV-HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS 143
++ H C+ L GHK + D+ W++D ++SAS DKTL+ +++ T + K + HN+
Sbjct: 115 NMDHMICER--TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNN 172
Query: 144 FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTG 202
+V CC LVVSGS D + ++WD++ I+T P ++AVSF+ I +G
Sbjct: 173 YV-FCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG 231
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDM-ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ 261
D V++WD G+ TL ++ + + SP+G Y+L + +D L +WD +
Sbjct: 232 SYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFS----K 287
Query: 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRMVYIWDTTSRRILYKLPGHTGS 320
+ +K GH+++ K + +S G K + +GS D +YIW+ +R I+ L GHT
Sbjct: 288 GKTLKQYTGHENS--KYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQP 345
Query: 321 VNESVFHATEPVI--GSCSSDKQIYL 344
V S H + +I G+ D +I++
Sbjct: 346 VLASDCHPVQNIIASGALEPDNKIHI 371
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/127 (27%), Positives = 57/127 (44%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL+GH I+ SP G YL T+ D + IW+M C + L GH+
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMI----CERTLTGHKLGVND--- 134
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
WS D V + S D+ + I++ + R+ L GH V F+ ++ S S D+
Sbjct: 135 -IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDE 193
Query: 341 QIYLGEI 347
+ + ++
Sbjct: 194 SVRIWDV 200
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 102/331 (30%), Positives = 174/331 (52%)
Query: 13 ALSTVS-ARPMEWSTVPYSA-PQAPGPNGKQRTSSLESPIMLLT---GHQSAVYTMKFNP 67
ALS+VS A P P +A P+A P Q ++ + L++ GH ++ +KF+P
Sbjct: 36 ALSSVSPANP------PITAVPEATAPTTSQESTIPGAGYKLISTIEGHTKSISAVKFSP 89
Query: 68 AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127
G + + S D+ + +W++ D L GHK + D W+ D I++AS DKTL+ +
Sbjct: 90 CGKFLGTSSADKTVKIWNM-SDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIY 148
Query: 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ- 186
+V T K K + H ++V CC LVVSGS D + ++WD+R ++T P
Sbjct: 149 EVPTVKMAKTLKGHTNYV-FCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDP 207
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM-ITGMSLSPDGSYLLTNG 245
++AVSF+ I +G D V++WD G+ TL ++ + + SP+G Y+L++
Sbjct: 208 VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSN 267
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK-VTAGSSDRMVYIWD 304
+D L +WD + + +K +GH++N K + +S G K + +GS D +Y+W+
Sbjct: 268 LDNTLKLWDFG----KGKTLKQYQGHENN--KYCIFANFSVTGGKWIISGSEDCKIYVWN 321
Query: 305 TTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
++ ++ L GHT +V S H + +I S
Sbjct: 322 LQTKEVVQSLEGHTQAVIASDCHPMQNMIAS 352
Score = 221 (82.9 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 66/260 (25%), Positives = 118/260 (45%)
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
K ++GH +I + ++ G + ++S DKT++ W++ + + H VN
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
S +V+ SDD T K++++ +T + +F+ S + +G D V+
Sbjct: 130 SADSKS-IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
+WD+R G TL H D ++ +S + DGS + + D + IWD +CVK L
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD----TANGQCVKTLV 244
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT 329
+ N +K +SP+G + + + D + +WD + L + GH N+ A
Sbjct: 245 DDE-NPPVAFVK--FSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHEN--NKYCIFAN 299
Query: 330 EPVIG-----SCSSDKQIYL 344
V G S S D +IY+
Sbjct: 300 FSVTGGKWIISGSEDCKIYV 319
Score = 219 (82.2 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 62/210 (29%), Positives = 99/210 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH + V+ FNP +++ SGS D + +W V G C L H + + + + D
Sbjct: 159 LKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVK--TLPAHSDPVSAVSFNRD 216
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAE-HNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
GS I S S D +R WD G+ +K + + N V S G ++S + D T KLW
Sbjct: 217 GSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGK-YILSSNLDNTLKLW 275
Query: 171 DMRQRGAIQTFP----DKYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQGH 225
D + ++ + +KY I A +FS K I +G D + VW+L+ EV +L+GH
Sbjct: 276 DFGKGKTLKQYQGHENNKYCIFA-NFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGH 334
Query: 226 QDMITGMSLSPDGSYLLTNGM--DCKLCIW 253
+ P + + + + D + IW
Sbjct: 335 TQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/172 (27%), Positives = 84/172 (48%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHW 108
+ L H V + FN G++I SGS+D + +W +G C +V + + +
Sbjct: 198 VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLV-DDENPPVAFVKF 256
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP----SRRGPPLVVSGSDD 164
+ +G I+S++ D TL+ WD GK +K+ H + N C S G ++SGS+D
Sbjct: 257 SPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHEN--NKYCIFANFSVTGGKWIISGSED 314
Query: 165 GTAKLWDMRQRGAIQTFPDKYQITAVSFSDA---SDKIYTGGI--DNDVKVW 211
+W+++ + +Q+ Q AV SD + I +G + DN +++W
Sbjct: 315 CKIYVWNLQTKEVVQSLEGHTQ--AVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/127 (25%), Positives = 59/127 (46%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
T++GH I+ + SP G +L T+ D + IW+M + C + L GH+
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLS----CERTLTGHKLGVND--- 126
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
WS D + S D+ + I++ + ++ L GHT V F+ ++ S S D+
Sbjct: 127 -FAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDE 185
Query: 341 QIYLGEI 347
+ + ++
Sbjct: 186 SVRIWDV 192
>UNIPROTKB|Q9NSS8 [details] [associations]
symbol:DKFZp434D199 "Putative uncharacterized protein
DKFZp434D199" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471059
EMBL:AL451070 EMBL:AC114495 UniGene:Hs.33962 HGNC:HGNC:30857
ChiTaRS:SNRNP40 EMBL:AL157420 IPI:IPI00385642 PIR:T46935 SMR:Q9NSS8
STRING:Q9NSS8 Ensembl:ENST00000373720 Uniprot:Q9NSS8
Length = 127
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 68/96 (70%), Positives = 83/96 (86%)
Query: 252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311
+WD+RP+AP+ RCVKI +G+ HNFEKNLL+C WSPDGSK+ AGS+DR VY+WDTTSRRIL
Sbjct: 31 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL 90
Query: 312 YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
YKLPGH GS+NE FH EP+I S SSDK++Y+GEI
Sbjct: 91 YKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 126
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 98/324 (30%), Positives = 162/324 (50%)
Query: 25 STVPYSAPQAPGPNGKQRTSSL-ESPIMLLT----GHQSAVYTMKFNPAGTVIASGSHDR 79
S+ Y Q P Q+T S+ ++P +L GH ++ ++KF+P G +AS S D+
Sbjct: 12 SSYLYQEQQQQQP---QQTESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADK 68
Query: 80 DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA 139
I +W + D K L+GHK I D+ W+ D I SAS DKT++ WDVE+GK +K +
Sbjct: 69 TIKIWGAY-DGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLK 127
Query: 140 EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDK 198
H +V + + L+VSGS D ++WD+ + +T V F+
Sbjct: 128 GHKEYVFGVSFNPQSN-LIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTL 186
Query: 199 IYTGGIDNDVKVWDLRKGEVSMTLQGHQDM-ITGMSLSPDGSYLLTNGMDCKLCIWDMRP 257
+ +G D V++WD G++ T+ ++ + SP+G ++L +D L +W
Sbjct: 187 VVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWS--- 243
Query: 258 YAPQNRCVKILEGHQHNFEKNLLKCGWSPD-GSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
Y +C+K GH++ EK + +S G + GS D ++YI++ +R I+ L G
Sbjct: 244 YNNNKKCLKTYTGHKN--EKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAG 301
Query: 317 HTGSVNESVFHATEPVIGSCSSDK 340
H V H TE +I S + +K
Sbjct: 302 HEDVVLTVACHPTENIIASGALEK 325
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL+GH I+ + SPDG +L + D + IW A + + LEGH+ + +
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWG----AYDGKFERTLEGHK----EGIS 92
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
WS D + + S D+ + IWD S +++ L GH V F+ +I S S D+
Sbjct: 93 DIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDE 152
Query: 341 QIYLGEI 347
+ + ++
Sbjct: 153 NVRIWDV 159
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 91/297 (30%), Positives = 154/297 (51%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH--GD--CKNFMVLKGHKNAILDLHW 108
LT H AV ++KF+ G ++AS S D+ I + ++ D + GH+N I D+ +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
++D I+SAS DKTL+ WDVETG IK + H ++ C ++VSGS D T +
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYA-FCVNFNPQSNMIVSGSFDETVR 138
Query: 169 LWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
+WD+ ++ P +TAV F+ I + D ++WD G TL ++
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 228 M-ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS- 285
++ + SP+G ++L +D L +W++ + +K GH + + + +S
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNIS----SAKFLKTYTGHVN--AQYCISSAFSV 252
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+G ++ +GS D V++W+ S+++L KL GHT +V H TE +I S S DK +
Sbjct: 253 TNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 70/263 (26%), Positives = 124/263 (47%)
Query: 46 LESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILD 105
+ P+ TGH++ + + F+ I S S D+ + LW V L GH N
Sbjct: 60 IAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSL-IKTLIGHTNYAFC 118
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+++ + I+S S D+T+R WDV TGK +K + H+ V + +R G L+VS S DG
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS-LIVSSSYDG 177
Query: 166 TAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
++WD ++T D ++ V FS I G +DN +++W++ + T
Sbjct: 178 LCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYT 237
Query: 224 GH---QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
GH Q I+ +G +++ D + +W++ + ++ LEGH + ++
Sbjct: 238 GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELN----SKKLLQKLEGHT----ETVM 289
Query: 281 KCGWSPDGSKVTAGSSDRMVYIW 303
P + + +GS D+ V IW
Sbjct: 290 NVACHPTENLIASGSLDKTVRIW 312
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 63/216 (29%), Positives = 109/216 (50%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDL 106
S I L GH + + + FNP +I SGS D + +W V G C VL H + + +
Sbjct: 104 SLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC--LKVLPAHSDPVTAV 161
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAE-HNSFVNSCCPSRRGPPLVVSGSDDG 165
+ DGS I+S+S D R WD TG +K + + N V+ S G ++V G+ D
Sbjct: 162 DFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILV-GTLDN 220
Query: 166 TAKLWDMRQRGAIQTFPD----KYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSM 220
T +LW++ ++T+ +Y I++ +FS + K I +G DN V +W+L ++
Sbjct: 221 TLRLWNISSAKFLKTYTGHVNAQYCISS-AFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ 279
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
L+GH + + ++ P + + + +D + IW +
Sbjct: 280 KLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQK 315
Score = 153 (58.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 40/170 (23%), Positives = 78/170 (45%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
+ +L H V + FN G++I S S+D +W G C ++ + + +
Sbjct: 148 LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI-DDENPPVSFVRF 206
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEH-NS-FVNSCCPSRRGPPLVVSGSDDGT 166
+ +G I+ + D TLR W++ + K +K H N+ + S S +VSGS+D
Sbjct: 207 SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNC 266
Query: 167 AKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
+W++ + +Q + + V+ + I +G +D V++W +K
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 367 (134.2 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 85/290 (29%), Positives = 148/290 (51%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTD 111
L G V ++ F+P G +ASGS + LW+ G+ L+GH ++ + ++ D
Sbjct: 914 LEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGEL--LQTLEGHSQSVRSVAFSPD 971
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G Q+ S+S D T++ W+ TG+ + H+ ++ + S G LV SGSDD T KLWD
Sbjct: 972 GKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLV-SGSDDNTIKLWD 1030
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ Q+ D + + AV+FS ++ + +D+ +K+WD GE+ TL+GH +
Sbjct: 1031 LATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVR 1090
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
++ SPDG L +N D + +W+ P + + + L G + +SPDG +
Sbjct: 1091 SVTFSPDGKLLASNSYDGTIKLWN--PLTGELQ--QTLTGRSDWVDS----VAFSPDGKQ 1142
Query: 291 VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
+ +G D + +WD+ + +L L GH+ + VF ++ S S D+
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQ 1192
Score = 365 (133.5 bits), Expect = 4.0e-32, P = 4.0e-32
Identities = 86/297 (28%), Positives = 146/297 (49%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHW 108
+ L GH V ++ F+P G ++ASGS+D I LW G+ +GH ++I + +
Sbjct: 785 LQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGEL--LQTFEGHPHSIWSVAF 842
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
DG ++ SAS D T++ WD+ TG+ + + H+ V S S G L+ S S D T K
Sbjct: 843 APDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGK-LLASSSLDSTIK 901
Query: 169 LWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
+W+ Q+ + + +V+FS K+ +G N VK+W+ GE+ TL+GH
Sbjct: 902 VWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ ++ SPDG L ++ D + +W+ + + +GH + + +SPD
Sbjct: 962 SVRSVAFSPDGKQLASSSSDTTIKLWN----STTGELQQTFKGH----DLWIRAVAFSPD 1013
Query: 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G + +GS D + +WD + + L H+ SV+ F + + S S D I L
Sbjct: 1014 GKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKL 1070
Score = 336 (123.3 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 86/298 (28%), Positives = 142/298 (47%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHW 108
+ L GH +V ++ F+P G +AS S D I LW+ G+ + KGH I + +
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQ--TFKGHDLWIRAVAF 1010
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ DG ++S S D T++ WD+ T + + + +H+ V++ S L S S D T K
Sbjct: 1011 SPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLA-SSSLDSTIK 1069
Query: 169 LWDMRQRGAIQ-TFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
LWD G +Q T Q + +V+FS + + D +K+W+ GE+ TL G
Sbjct: 1070 LWDSAT-GELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRS 1128
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
D + ++ SPDG L + D + +WD + ++ LEGH + + +SP
Sbjct: 1129 DWVDSVAFSPDGKQLASGYYDSTIKLWD----SATGELLQTLEGHSDRIQSVV----FSP 1180
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
DG + +GS D+ +WD + +L GH+ V F ++ S S + I L
Sbjct: 1181 DGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKL 1238
Score = 328 (120.5 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 77/250 (30%), Positives = 128/250 (51%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+ H + + ++ DG Q++S S D T++ WD TG+ ++ + H+ V S S G
Sbjct: 746 LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGK 805
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLR 214
L+ SGS D T LWD +QTF + I +V+F+ ++ + D+ +K+WDL
Sbjct: 806 -LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
Query: 215 KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274
GE+ TL H + ++ SPDG L ++ +D + +W+ P + + + LEG
Sbjct: 865 TGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN--PATGELQ--QSLEGRS-G 919
Query: 275 FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
+ K++ +SPDG K+ +GS V +W+ + +L L GH+ SV F +
Sbjct: 920 WVKSV---AFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLA 976
Query: 335 SCSSDKQIYL 344
S SSD I L
Sbjct: 977 SSSSDTTIKL 986
Score = 313 (115.2 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 83/271 (30%), Positives = 131/271 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH + + F+P G + SGS D I LW + + L+ H ++ + ++ D Q
Sbjct: 1000 GHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDL-ATSELQQSLEDHSRSVHAVAFSPDDKQ 1058
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
+ S+S D T++ WD TG+ + + H+ V S S G L+ S S DGT KLW+
Sbjct: 1059 LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGK-LLASNSYDGTIKLWNPLT 1117
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
QT + + +V+FS ++ +G D+ +K+WD GE+ TL+GH D I +
Sbjct: 1118 GELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVV 1177
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
SPDG L + D +WD P + ++I EGH E +SPDG + +
Sbjct: 1178 FSPDGKLLASGSYDQTAKLWD--PATGE--LLQIFEGHSKWVES----VAFSPDGKLLAS 1229
Query: 294 GSSDRMVYIWDTTSRRILYKL--PGHT-GSV 321
S + +WD + +L L P + GSV
Sbjct: 1230 SSYGETIKLWDPVTGELLQTLNDPDESAGSV 1260
Score = 263 (97.6 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 78/279 (27%), Positives = 131/279 (46%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKN 101
TS L+ L H +V+ + F+P +AS S D I LW G+ + L+GH
Sbjct: 1033 TSELQQS---LEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQR--TLEGHSQ 1087
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
+ + ++ DG + S S D T++ W+ TG+ + + + +V+S S G L SG
Sbjct: 1088 GVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLA-SG 1146
Query: 162 SDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
D T KLWD +QT +I +V FS + +G D K+WD GE+
Sbjct: 1147 YYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQ 1206
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+GH + ++ SPDG L ++ + +WD P + +L+ ++ +++
Sbjct: 1207 IFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD--PVTGE-----LLQT-LNDPDESAG 1258
Query: 281 KCGWSPDGSKVTAGSSDRM-VYIWDTTSRRILYKLPGHT 318
+SPDG+++ S D IWD + +L L GH+
Sbjct: 1259 SVAFSPDGNRLA--SVDIFDTKIWDPATGELLQALKGHS 1295
Score = 255 (94.8 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 77/250 (30%), Positives = 125/250 (50%)
Query: 37 PNGKQ-RTSSLESPIML-----------LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
P+ KQ +SSL+S I L L GH V ++ F+P G ++AS S+D I LW
Sbjct: 1054 PDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLW 1113
Query: 85 H-VHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS 143
+ + G+ + L G + + + ++ DG Q+ S D T++ WD TG+ ++ + H+
Sbjct: 1114 NPLTGELQQ--TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSD 1171
Query: 144 FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTG 202
+ S S G L+ SGS D TAKLWD +Q F + + +V+FS + +
Sbjct: 1172 RIQSVVFSPDGK-LLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASS 1230
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQ 261
+K+WD GE+ TL + ++ SPDG+ L + + D K IWD P +
Sbjct: 1231 SYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTK--IWD--PATGE 1286
Query: 262 NRCVKILEGH 271
++ L+GH
Sbjct: 1287 --LLQALKGH 1294
Score = 225 (84.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 67/223 (30%), Positives = 107/223 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTD 111
LTG V ++ F+P G +ASG +D I LW G+ L+GH + I + ++ D
Sbjct: 1124 LTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGEL--LQTLEGHSDRIQSVVFSPD 1181
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G + S S D+T + WD TG+ ++ H+ +V S S G L+ S S T KLWD
Sbjct: 1182 GKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGK-LLASSSYGETIKLWD 1240
Query: 172 MRQRGAIQTFPDKYQIT-AVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+QT D + +V+FS +++ + I D K+WD GE+ L+GH +
Sbjct: 1241 PVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIF-DTKIWDPATGELLQALKGHSKWV- 1298
Query: 231 GMSLSPDGSYLLTNGMDC---KLCIWDMRPYAPQNRCVKILEG 270
S + G + + C K +W + Y P C+ + +G
Sbjct: 1299 -WSRTGAGISIFLDQWLCLQEKRILWLPQSYQPF--CISVNDG 1338
Score = 141 (54.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL+ H + + SPDG L++ D + IWD P + ++ L+GH E
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWD--PATGE--LLQTLDGHSGTVES--- 797
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
+SPDG + +GS D + +WD+ + +L GH S+ F + S S D
Sbjct: 798 -LAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDS 856
Query: 341 QIYLGEI 347
I + ++
Sbjct: 857 TIKIWDL 863
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 81/253 (32%), Positives = 127/253 (50%)
Query: 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLW--HVHGDCKNFMVLKGHKNAILDLHWTTD 111
TGH+ AV + F+P+G ++ASGS D+ + +W +V G+ V + H + +H+ +D
Sbjct: 58 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST---VFRAHTATVRSVHFCSD 114
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G ++AS DKT++ W K + +++H ++V C L+VS SDD T KLWD
Sbjct: 115 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 173
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
R + ++ + +T V F + I G+DN VKVWD+R + Q H +
Sbjct: 174 KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 233
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
G+S P G+YL+T D L I D+ + R + L GHQ +S G
Sbjct: 234 GLSFHPSGNYLITASSDSTLKILDLM----EGRLLYTLHGHQGP----ATTVAFSRTGEY 285
Query: 291 VTAGSSDRMVYIW 303
+G SD V +W
Sbjct: 286 FASGGSDEQVMVW 298
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 81/290 (27%), Positives = 127/290 (43%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ AV + F+ +ASGS D + +WH+ + + GHK+A+ ++++ G
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHL 75
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-R 173
+ S S DKT+R W + H + V S G V + SDD T K+W R
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA-SDDKTVKVWATHR 134
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q+ + FS I + D VK+WD E + H +T +
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVD 194
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVT 292
P G+ + GMD + +WD+R + ++L+ +Q H+ N L + P G+ +
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTH-------RLLQHYQLHSAAVNGLS--FHPSGNYLI 245
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
SSD + I D R+LY L GH G F T S SD+Q+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Score = 215 (80.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 60/247 (24%), Positives = 102/247 (41%)
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
KGH++A+ + ++ + Q+ S S D L W ++ + + H V +C
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAV-TCVNFSPSGH 74
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SGS D T ++W +G F + +V F T D VKVW +
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR 134
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +L H + + SPDG +++ D + +WD CV H F
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS----SRECVHSYCEHG-GF 189
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
+ + P G+ + A D V +WD + R+L H+ +VN FH + + +
Sbjct: 190 ---VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 336 CSSDKQI 342
SSD +
Sbjct: 247 ASSDSTL 253
Score = 170 (64.9 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 49/193 (25%), Positives = 84/193 (43%)
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLR-K 215
+ SGS D +W M+ + F K +T V+FS + + +G D V++W K
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
GE S + H + + DG +T D + +W +R + QH
Sbjct: 94 GE-STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW------ATHRQKFLFSLSQHI- 145
Query: 276 EKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
N ++C +SPDG + + S D+ V +WD +SR ++ H G V FH + I
Sbjct: 146 --NWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 335 SCSSDKQIYLGEI 347
+ D + + ++
Sbjct: 204 AAGMDNTVKVWDV 216
Score = 168 (64.2 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 47/161 (29%), Positives = 74/161 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTD 111
L+ H + V KF+P G +I S S D+ + LW +C + G +D H
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFH--PS 198
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G+ I +A D T++ WDV T + ++ H++ VN G L+ + SD T K+ D
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS-TLKILD 257
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ + + T T V+FS + +GG D V VW
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 81/253 (32%), Positives = 127/253 (50%)
Query: 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLW--HVHGDCKNFMVLKGHKNAILDLHWTTD 111
TGH+ AV + F+P+G ++ASGS D+ + +W +V G+ V + H + +H+ +D
Sbjct: 20 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST---VFRAHTATVRSVHFCSD 76
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G ++AS DKT++ W K + +++H ++V C L+VS SDD T KLWD
Sbjct: 77 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 135
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
R + ++ + +T V F + I G+DN VKVWD+R + Q H +
Sbjct: 136 KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 195
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
G+S P G+YL+T D L I D+ + R + L GHQ +S G
Sbjct: 196 GLSFHPSGNYLITASSDSTLKILDLM----EGRLLYTLHGHQGP----ATTVAFSRTGEY 247
Query: 291 VTAGSSDRMVYIW 303
+G SD V +W
Sbjct: 248 FASGGSDEQVMVW 260
Score = 247 (92.0 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 72/267 (26%), Positives = 114/267 (42%)
Query: 78 DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137
D + +WH+ + + GHK+A+ ++++ G + S S DKT+R W +
Sbjct: 2 DSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 60
Query: 138 MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDAS 196
H + V S G V + SDD T K+W RQ+ + FS
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTA-SDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 197 DKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
I + D VK+WD E + H +T + P G+ + GMD + +WD+R
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 257 PYAPQNRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315
+ ++L+ +Q H+ N L + P G+ + SSD + I D R+LY L
Sbjct: 180 TH-------RLLQHYQLHSAAVNGLS--FHPSGNYLITASSDSTLKILDLMEGRLLYTLH 230
Query: 316 GHTGSVNESVFHATEPVIGSCSSDKQI 342
GH G F T S SD+Q+
Sbjct: 231 GHQGPATTVAFSRTGEYFASGGSDEQV 257
Score = 168 (64.2 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 47/161 (29%), Positives = 74/161 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTD 111
L+ H + V KF+P G +I S S D+ + LW +C + G +D H
Sbjct: 103 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFH--PS 160
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G+ I +A D T++ WDV T + ++ H++ VN G L+ + SD T K+ D
Sbjct: 161 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS-TLKILD 219
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ + + T T V+FS + +GG D V VW
Sbjct: 220 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 158 (60.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 46/187 (24%), Positives = 80/187 (42%)
Query: 164 DGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMT 221
D +W M+ + F K +T V+FS + + +G D V++W KGE S
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-STV 60
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
+ H + + DG +T D + +W +R + QH N ++
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVW------ATHRQKFLFSLSQHI---NWVR 111
Query: 282 CG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
C +SPDG + + S D+ V +WD +SR ++ H G V FH + I + D
Sbjct: 112 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 171
Query: 341 QIYLGEI 347
+ + ++
Sbjct: 172 TVKVWDV 178
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 36/141 (25%), Positives = 59/141 (41%)
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
+D+ + VW ++ + GH+D +T ++ SP G L + D + IW P
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV--PNVKGES 58
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
V H +++ C DG S D+ V +W T ++ L+ L H V
Sbjct: 59 TV--FRAHTATV-RSVHFCS---DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRC 112
Query: 324 SVFHATEPVIGSCSSDKQIYL 344
+ F +I S S DK + L
Sbjct: 113 AKFSPDGRLIVSASDDKTVKL 133
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 84/257 (32%), Positives = 126/257 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW--HVHGDCKNFMVLKGHKNAILDLHWTT 110
L GH+ AV ++F+P+G ++ASGS D+ + LW V G+ V K H + +H+++
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGEST---VFKAHTATVRSVHFSS 114
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++AS DKT++ W V K + +++H ++V C L+ S SDD T KLW
Sbjct: 115 DGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVR-CARFSPDGRLIASASDDKTVKLW 173
Query: 171 DMRQRGAIQTFPDKYQITA-VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D R I +F + V F + I G D VKVWD+R + Q H +
Sbjct: 174 DKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAV 233
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDG 288
+S P G+YL+T D L I D+ + R + L GHQ C +S G
Sbjct: 234 NSLSFHPSGNYLITASNDSTLKILDLL----EGRLLYTLHGHQ-----GPATCVAFSRTG 284
Query: 289 SKVTAGSSDRMVYIWDT 305
+G SD V +W T
Sbjct: 285 DFFASGGSDEQVMVWKT 301
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 79/290 (27%), Positives = 127/290 (43%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ A+ ++ F+ +ASGS D + +W + + + ++ GHK+A++ + ++ G
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLV-GHKDAVMCVQFSPSGHL 76
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-R 173
+ S S DKT+ W + H + V S S G LV + SDD T K+W + R
Sbjct: 77 VASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTA-SDDKTIKVWTVHR 135
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q+ + FS I + D VK+WD E + H +
Sbjct: 136 QKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVE 195
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVT 292
P G+ + G D + +WD+R NR +L+ +Q H N L + P G+ +
Sbjct: 196 FHPSGTCIAAAGTDKTVKVWDVR----MNR---LLQHYQVHTAAVNSLS--FHPSGNYLI 246
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
S+D + I D R+LY L GH G F T S SD+Q+
Sbjct: 247 TASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQV 296
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/210 (28%), Positives = 102/210 (48%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S++ + H + V ++ F+ G + + S D+ I +W VH K L H N +
Sbjct: 92 SVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQ-KFLFSLSQHINWVR 150
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
++ DG I SAS DKT++ WD + + I EH F N G + +G+D
Sbjct: 151 CARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDK 210
Query: 165 GTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
T K+WD+R +Q + + ++SF + + + T D+ +K+ DL +G + TL
Sbjct: 211 -TVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLH 269
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
GHQ T ++ S G + + G D ++ +W
Sbjct: 270 GHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 228 (85.3 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 61/247 (24%), Positives = 105/247 (42%)
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
+GH++AI + ++ + Q+ S S D L+ W ++ + + H V C
Sbjct: 17 RGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAV-MCVQFSPSGH 75
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
LV SGS D T LW +G F + +V FS + T D +KVW + +
Sbjct: 76 LVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHR 135
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +L H + + SPDG + + D + +WD C+ H F
Sbjct: 136 QKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKT----SRECIHSFCEHG-GF 190
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
++ + P G+ + A +D+ V +WD R+L HT +VN FH + + +
Sbjct: 191 ANHV---EFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLIT 247
Query: 336 CSSDKQI 342
S+D +
Sbjct: 248 ASNDSTL 254
Score = 192 (72.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 54/193 (27%), Positives = 87/193 (45%)
Query: 158 VVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVW-DLRK 215
+ SGS D K+W M+ Q A K + V FS + + +G D V +W K
Sbjct: 35 LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVK 94
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
GE S + H + + S DG L+T D + +W + +R + QH
Sbjct: 95 GE-STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTV------HRQKFLFSLSQHI- 146
Query: 276 EKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
N ++C +SPDG + + S D+ V +WD TSR ++ H G N FH + I
Sbjct: 147 --NWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIA 204
Query: 335 SCSSDKQIYLGEI 347
+ +DK + + ++
Sbjct: 205 AAGTDKTVKVWDV 217
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 78/253 (30%), Positives = 126/253 (49%)
Query: 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLW--HVHGDCKNFMVLKGHKNAILDLHWTTD 111
TGH+ AV + F+P+G ++ASGS D+ + +W ++ G+ V + H + +H+ +D
Sbjct: 89 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGEST---VFRAHTATVRSVHFCSD 145
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G ++AS DKT++ W K + +++H ++V C L+VS SDD T KLWD
Sbjct: 146 GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 204
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
R + ++ + +T V F + + G+DN VKVWD+R + Q H +
Sbjct: 205 KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 264
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+S P G+YL+T D L I D+ + R + L GHQ +S G
Sbjct: 265 ALSFHPSGNYLVTASSDSTLKILDLM----EGRLLYTLHGHQGP----ATTVAFSRTGEY 316
Query: 291 VTAGSSDRMVYIW 303
+G SD V +W
Sbjct: 317 FASGGSDEQVMVW 329
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 81/290 (27%), Positives = 127/290 (43%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ AV + F+ +ASGS D + +WH+ + + GHK+A+ ++++ G
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHL 106
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-R 173
+ S S DKT+R W + H + V S G V + SDD T K+W R
Sbjct: 107 LASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA-SDDKTIKVWSTHR 165
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q+ + FS I + D VK+WD E + H +T +
Sbjct: 166 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 225
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVT 292
P G+ + GMD + +WD+R + ++L+ +Q H+ N L + P G+ +
Sbjct: 226 FHPSGTCVAAAGMDNTVKVWDVRTH-------RLLQHYQLHSAAVNALS--FHPSGNYLV 276
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
SSD + I D R+LY L GH G F T S SD+Q+
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 326
Score = 216 (81.1 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 60/247 (24%), Positives = 102/247 (41%)
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
KGH++A+ + ++ + Q+ S S D L W ++ + + H V +C
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAV-TCVNFSPSGH 105
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SGS D T ++W +G F + +V F T D +KVW +
Sbjct: 106 LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 165
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +L H + + SPDG +++ D + +WD CV H F
Sbjct: 166 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT----SRECVHSYCEHG-GF 220
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
+ + P G+ V A D V +WD + R+L H+ +VN FH + + +
Sbjct: 221 ---VTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 277
Query: 336 CSSDKQI 342
SSD +
Sbjct: 278 ASSDSTL 284
Score = 175 (66.7 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 49/193 (25%), Positives = 84/193 (43%)
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLR-K 215
+ SGS D +W M+ + F K +T V+FS + + +G D V++W K
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK 124
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
GE S + H + + DG +T D + +W +R + QH
Sbjct: 125 GE-STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWST------HRQKFLFSLSQHI- 176
Query: 276 EKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
N ++C +SPDG + + S D+ V +WD TSR ++ H G V FH + +
Sbjct: 177 --NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVA 234
Query: 335 SCSSDKQIYLGEI 347
+ D + + ++
Sbjct: 235 AAGMDNTVKVWDV 247
Score = 169 (64.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 47/161 (29%), Positives = 75/161 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTD 111
L+ H + V KF+P G +I S S D+ + LW +C + G +D H
Sbjct: 172 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH--PS 229
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G+ + +A D T++ WDV T + ++ H++ VN+ G LV + SD T K+ D
Sbjct: 230 GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS-TLKILD 288
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ + + T T V+FS + +GG D V VW
Sbjct: 289 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 80/253 (31%), Positives = 125/253 (49%)
Query: 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLW--HVHGDCKNFMVLKGHKNAILDLHWTTD 111
TGH+ AV + F+P+G ++ASGS D+ + +W +V G+ V + H + +H+ +D
Sbjct: 58 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST---VFRAHTATVRSVHFCSD 114
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G +++AS DKT++ W + + + +H ++V C L+VS SDD T KLWD
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 173
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
R I ++ + +T V F + I G+DN VKVWD R + Q H +
Sbjct: 174 KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVN 233
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+S P G+YL+T D L I D+ + R + L GHQ +S G
Sbjct: 234 ALSFHPSGNYLITASSDSTLKILDLM----EGRLLYTLHGHQGP----ATTVAFSRTGEY 285
Query: 291 VTAGSSDRMVYIW 303
+G SD V +W
Sbjct: 286 FASGGSDEQVMVW 298
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 83/290 (28%), Positives = 127/290 (43%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ AV + F+ +ASGS D + +WH+ + + GHK+A+ ++++ G
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHL 75
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-R 173
+ S S DKT+R W + H + V S G LV + SDD T K+W R
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA-SDDKTVKVWSTHR 134
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
QR + FS I + D VK+WD E + H +T +
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVD 194
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVT 292
P G+ + GMD + +WD R + ++L+ +Q H+ N L + P G+ +
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDARTH-------RLLQHYQLHSAAVNALS--FHPSGNYLI 245
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
SSD + I D R+LY L GH G F T S SD+Q+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Score = 217 (81.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 59/247 (23%), Positives = 102/247 (41%)
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
KGH++A+ + ++ + + S S D TL W ++ + + H V +C
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAV-TCVNFSPSGH 74
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SGS D T ++W +G F + +V F + T D VKVW +
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+L H + + SPDG +++ D + +WD C+ H F
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT----SRECIHSYCEHG-GF 189
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
+ + P G+ + A D V +WD + R+L H+ +VN FH + + +
Sbjct: 190 ---VTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLIT 246
Query: 336 CSSDKQI 342
SSD +
Sbjct: 247 ASSDSTL 253
Score = 168 (64.2 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 47/161 (29%), Positives = 74/161 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTD 111
LT H + V KF+P G +I S S D+ + LW +C + G +D H
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFH--PS 198
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G+ I +A D T++ WD T + ++ H++ VN+ G L+ + SD T K+ D
Sbjct: 199 GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDS-TLKILD 257
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ + + T T V+FS + +GG D V VW
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/158 (25%), Positives = 69/158 (43%)
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM 246
+T V FS + + +G +D+ + +W ++ + GH+D +T ++ SP G L +
Sbjct: 22 VTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSR 81
Query: 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306
D + IW P V H +++ C DG + S D+ V +W T
Sbjct: 82 DKTVRIWV--PNVKGESTV--FRAHTATV-RSVHFCS---DGQSLVTASDDKTVKVWSTH 133
Query: 307 SRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
+R L+ L H V + F +I S S DK + L
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 80/262 (30%), Positives = 128/262 (48%)
Query: 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLW--HVHGDCKNFMVLKGHKNAILDLHWTTD 111
TGH+ AV + F+P+G ++ASGS D+ + +W +V G+ V + H + +H+ +D
Sbjct: 58 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST---VFRAHTATVRSVHFCSD 114
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G +++AS DKT++ W + + + +H ++V C L+VS SDD T KLWD
Sbjct: 115 GQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 173
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
R + ++ + +T V F + I G+DN VKVWD R + Q H +
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVN 233
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+S P G+YL+T D L I D+ + R + L GHQ +S G
Sbjct: 234 ALSFHPSGNYLITASSDSTLKILDLM----EGRLLYTLHGHQGP----ATTVAFSRTGEY 285
Query: 291 VTAGSSDRMVYIWDTTSRRILY 312
+G SD V +W + + Y
Sbjct: 286 FASGGSDEQVMVWKSNFDTVDY 307
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 82/290 (28%), Positives = 128/290 (44%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ AV + F+ +ASGS D + +WH+ + + GHK+A+ ++++ G
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHL 75
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-R 173
+ S S DKT+R W + H + V S G L+V+ SDD T K+W R
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ-LLVTASDDKTVKVWSTHR 134
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
QR + FS I + D VK+WD E + H +T +
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVT 292
P G+ + GMD + +WD R + ++++ +Q H+ N L + P G+ +
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDTRTH-------RLVQHYQLHSAAVNALS--FHPSGNYLI 245
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
SSD + I D R+LY L GH G F T S SD+Q+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Score = 218 (81.8 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 60/247 (24%), Positives = 103/247 (41%)
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
KGH++A+ + ++ + + S S D TL W ++ + + H V +C
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAV-TCVNFSPSGH 74
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SGS D T ++W +G F + +V F + T D VKVW +
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHR 134
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+L H + + SPDG +++ D + +WD CV H F
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT----SRECVHSYCEHG-GF 189
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
+ + P G+ + A D V +WDT + R++ H+ +VN FH + + +
Sbjct: 190 ---VTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLIT 246
Query: 336 CSSDKQI 342
SSD +
Sbjct: 247 ASSDSTL 253
Score = 170 (64.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 47/161 (29%), Positives = 74/161 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTD 111
LT H + V KF+P G +I S S D+ + LW +C + G +D H
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH--PS 198
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G+ I +A D T++ WD T + ++ H++ VN+ G L+ + SD T K+ D
Sbjct: 199 GTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDS-TLKILD 257
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ + + T T V+FS + +GG D V VW
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/158 (25%), Positives = 69/158 (43%)
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM 246
+T V FS + + +G +D+ + +W ++ + GH+D +T ++ SP G L +
Sbjct: 22 VTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSR 81
Query: 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306
D + IW P V H +++ C DG + S D+ V +W T
Sbjct: 82 DKTVRIWV--PNVKGESTV--FRAHTATV-RSVHFCS---DGQLLVTASDDKTVKVWSTH 133
Query: 307 SRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
+R L+ L H V + F +I S S DK + L
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 92/293 (31%), Positives = 146/293 (49%)
Query: 37 PNGKQRTS-SLESPIML-----------LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
P+GKQ S S+++ +M+ TGH+ AV ++F+P+ ++AS S D+ + LW
Sbjct: 28 PSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLW 87
Query: 85 --HVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
V G+ ++ + H ++ + ++ DG +++AS D++++ W V K I + EHN
Sbjct: 88 VPSVKGES---VLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHN 144
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASDKIY 200
++V C L+VS SDD T KLWD R I TF P Y + V F +S I
Sbjct: 145 NWVR-CARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS-SYVDFHPSSTCIA 202
Query: 201 TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP 260
T DN V+VWD+R + Q H + +S P G++LLT D L I D+
Sbjct: 203 TASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLL---- 258
Query: 261 QNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDTTSRRILY 312
+ R + L GHQ + C +S G + + SD+ V +W T + Y
Sbjct: 259 EGRLLYTLHGHQGS-----ASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDY 306
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 81/304 (26%), Positives = 140/304 (46%)
Query: 43 TSSLESPIML--LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK 100
+S+L+ P + GH+ A+ ++ F+P+G IASGS D + +W++ + + GHK
Sbjct: 2 SSALDDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYR-FTGHK 60
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
+A+ + ++ + S+S DKT+R W + H V S C S G L+ +
Sbjct: 61 DAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTA 120
Query: 161 GSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS 219
SDD + KLW + ++ I T + + FS + + D VK+WD ++
Sbjct: 121 -SDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLI 179
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKN 278
T + + P + + T D + +WD+R + +L+ +Q H+ N
Sbjct: 180 HTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHT-------LLQHYQVHSAAVN 232
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
L + P G+ + SSD + I D R+LY L GH GS + F + S S
Sbjct: 233 ALS--FHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGS 290
Query: 339 DKQI 342
D+Q+
Sbjct: 291 DQQV 294
Score = 201 (75.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 59/212 (27%), Positives = 101/212 (47%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKI 199
H + S S G + SGS D + +W+M+ + F K +T V FS ++ +
Sbjct: 17 HRDAITSLDFSPSGKQ-IASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 200 YTGGIDNDVKVW-DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+ D V++W KGE S+ + H + + S DG LLT D + +W +
Sbjct: 76 ASSSRDKTVRLWVPSVKGE-SVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVH-- 132
Query: 259 APQNRCVKILEGHQHNFEKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL--P 315
+ + + L +HN N ++C +SPDG + + S DR V +WD +SR++++ P
Sbjct: 133 --RQKIICTLR--EHN---NWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEP 185
Query: 316 GHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
G S + FH + I + SSD + + +I
Sbjct: 186 GGYSSYVD--FHPSSTCIATASSDNTVRVWDI 215
Score = 163 (62.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 51/182 (28%), Positives = 81/182 (44%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHW 108
I L H + V +F+P G ++ S S DR + LW + G ++ +D H
Sbjct: 137 ICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFH- 195
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ I +AS D T+R WD+ T ++ H++ VN+ G L+ + SD T K
Sbjct: 196 -PSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDS-TLK 253
Query: 169 LWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV--SMTLQGH 225
+ D+ + + T + VSFS + D+ + G D V VW V S LQ
Sbjct: 254 ILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVLQQK 313
Query: 226 QD 227
+D
Sbjct: 314 RD 315
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 79/252 (31%), Positives = 125/252 (49%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLW--HVHGDCKNFMVLKGHKNAILDLHWTTDG 112
GH+ AV + F+P+G ++ASGS D+ + +W +V G+ V + H + +H+ +DG
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST---VFRAHTATVRSVHFCSDG 115
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++AS DKT++ W K + +++H ++V C L+VS SDD T KLWD
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVR-CAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R + ++ + +T V F + I G+DN VKVWD+R + Q H +
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
+S P G+YL+T D L I D+ + R + L GHQ +S G
Sbjct: 235 LSFHPSGNYLVTASSDSTLKILDLM----EGRLLYTLHGHQGP----ATTVAFSRTGEYF 286
Query: 292 TAGSSDRMVYIW 303
+G SD V +W
Sbjct: 287 ASGGSDEQVMVW 298
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 81/290 (27%), Positives = 128/290 (44%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ AV ++ F+ +ASGS D + +WH+ + + GHK+A+ ++++ G
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYR-FAGHKDAVTCVNFSPSGHL 75
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-R 173
+ S S DKT+R W + H + V S G V + SDD T K+W R
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA-SDDKTVKVWSTHR 134
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q+ + FS I + D VK+WD E + H +T +
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVT 292
P G+ + GMD + +WD+R + ++L+ +Q H+ N L + P G+ +
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTH-------RLLQHYQLHSAAVNALS--FHPSGNYLV 245
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
SSD + I D R+LY L GH G F T S SD+Q+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Score = 225 (84.3 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 61/247 (24%), Positives = 103/247 (41%)
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
KGH++A+ + ++ + Q+ S S D L W ++ + + A H V +C
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAV-TCVNFSPSGH 74
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SGS D T ++W +G F + +V F T D VKVW +
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR 134
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +L H + + SPDG +++ D + +WD CV H F
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT----SRECVHSYCEHG-GF 189
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
+ + P G+ + A D V +WD + R+L H+ +VN FH + + +
Sbjct: 190 ---VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 246
Query: 336 CSSDKQI 342
SSD +
Sbjct: 247 ASSDSTL 253
Score = 174 (66.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 51/193 (26%), Positives = 85/193 (44%)
Query: 158 VVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLR-K 215
+ SGS D +W M+ Q A + K +T V+FS + + +G D V++W K
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
GE S + H + + DG +T D + +W +R + QH
Sbjct: 94 GE-STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST------HRQKFLFSLSQHI- 145
Query: 276 EKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
N ++C +SPDG + + S D+ V +WD TSR ++ H G V FH + I
Sbjct: 146 --NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 335 SCSSDKQIYLGEI 347
+ D + + ++
Sbjct: 204 AAGMDNTVKVWDV 216
Score = 170 (64.9 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 48/161 (29%), Positives = 75/161 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTD 111
L+ H + V KF+P G +I S S D+ + LW +C + G +D H
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH--PS 198
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G+ I +A D T++ WDV T + ++ H++ VN+ G LV + SD T K+ D
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS-TLKILD 257
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ + + T T V+FS + +GG D V VW
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 90/299 (30%), Positives = 143/299 (47%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L H + + N AG+ +GS+DR +W + L+GH+N + + +
Sbjct: 87 VLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASG-EELHTLEGHRNVVYAIAFNNP 145
Query: 112 -GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
G +I + S DKT + W ETGK H + + C +V +GS D TAKLW
Sbjct: 146 YGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEI-VCLSFNPQSTVVATGSMDTTAKLW 204
Query: 171 DMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D++ + T +I ++SF + D+I TG D+ V VWD G TL GH I
Sbjct: 205 DIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEI 264
Query: 230 TGMSLSPDGSYLLTNGMDCKLC-IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ S D S +LT MD K C +WD A +CV L GH ++ L C + G
Sbjct: 265 SSALFSWDCSLILTGSMD-KTCMLWD----ATSGKCVATLTGHD---DEILDSC-FDYTG 315
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ S+D +++ T+R+ + KL GH G +++ F+ + + SSDK + ++
Sbjct: 316 KLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDV 374
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 85/300 (28%), Positives = 140/300 (46%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHK 100
T+S E + L GH++ VY + FN P G IA+GS D+ LW G C + +GH
Sbjct: 121 TASGEE-LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKC--YHTFRGHT 177
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
I+ L + + + + S D T + WD+++G+++ + H + + S G +++
Sbjct: 178 AEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR-IIT 236
Query: 161 GSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS 219
GS D T +WD + T +I++ FS I TG +D +WD G+
Sbjct: 237 GSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCV 296
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
TL GH D I G + T D +++ A +C+ LEGH E +
Sbjct: 297 ATLTGHDDEILDSCFDYTGKLIATASADGTARVYN----ATTRKCITKLEGH----EGEI 348
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
K ++P G+++ GSSD+ IWD + + L L GHT + F+ ++ + S D
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 75/250 (30%), Positives = 120/250 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH + + + FNP TV+A+GS D LW + + + L GH I+ L + T G +
Sbjct: 175 GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG-EEVVTLTGHLAEIISLSFDTSGDR 233
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
II+ S D T+ WD TG+++ + H + ++S S L+++GS D T LWD
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSW-DCSLILTGSMDKTCMLWDATS 292
Query: 175 RGAIQTFPDKYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ T S D + K I T D +V++ + L+GH+ I+ +S
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS 352
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
+P G+ LLT D IWD++ +C+++LEGH + C ++ G+ V
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDVQT----GQCLQVLEGHTDE----IFSCAFNYKGNIVIT 404
Query: 294 GSSDRMVYIW 303
GS D IW
Sbjct: 405 GSKDNSCRIW 414
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 73/248 (29%), Positives = 114/248 (45%)
Query: 93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSR 152
F VL+ H + ++ GS I+ S D+T + WD +G+++ + H + V + +
Sbjct: 85 FKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 153 RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ +GS D T KLW TF +I +SF+ S + TG +D K+W
Sbjct: 145 PYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLW 204
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
D++ GE +TL GH I +S G ++T D + +WD A R V L GH
Sbjct: 205 DIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWD----ASTGRKVHTLIGH 260
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
L W D S + GS D+ +WD TS + + L GH + +S F T
Sbjct: 261 CAEISSALFS--W--DCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK 316
Query: 332 VIGSCSSD 339
+I + S+D
Sbjct: 317 LIATASAD 324
Score = 257 (95.5 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 56/205 (27%), Positives = 103/205 (50%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
++ LTGH + + ++ F+ +G I +GS D + +W K ++ GH I ++
Sbjct: 212 VVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLI-GHCAEISSALFS 270
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
D S I++ S DKT WD +GK + + H+ + C G L+ + S DGTA++
Sbjct: 271 WDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARV 329
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
++ R I + +I+ +SF+ +++ TG D ++WD++ G+ L+GH D
Sbjct: 330 YNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDE 389
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIW 253
I + + G+ ++T D IW
Sbjct: 390 IFSCAFNYKGNIVITGSKDNSCRIW 414
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 80/262 (30%), Positives = 129/262 (49%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLW--HVHGDCKNFMVLKGHKNAILDLHWTTDG 112
GH+ AV + F+P+G ++ASGS D+ + +W +V G+ V + H + +H+ +DG
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGEST---VFRAHTATVRSVHFCSDG 115
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+++AS DKT++ W K + +++H ++V C L+VS SDD T KLWD
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVR-CARFSPDGRLIVSASDDKTVKLWDK 174
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R + ++ + +T V F + I +DN VKVWD+R + Q H +
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
+S P G+YLLT D L I D+ + R + L GHQ +S G
Sbjct: 235 LSFHPSGNYLLTASSDSTLKILDLM----EGRLLYTLHGHQGP----ATTVAFSRTGEYF 286
Query: 292 TAGSSDRMVYIWDTTSRRILYK 313
+G SD V +W + + Y+
Sbjct: 287 ASGGSDEQVMVWKSNFDVVDYR 308
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 80/290 (27%), Positives = 128/290 (44%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ A+ ++ F+ +ASGS D + +WH+ + + GHK+A+ ++++ G
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYR-FAGHKDAVTCVNFSPSGHL 75
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-R 173
+ S S DKT+R W + H + V S G LV + SDD T K+W R
Sbjct: 76 LASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA-SDDKTVKVWSTHR 134
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q+ + FS I + D VK+WD E + H +T +
Sbjct: 135 QKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVT 292
P G+ + MD + +WD+R + ++L+ +Q H+ N L + P G+ +
Sbjct: 195 FHPSGTCIAAASMDNTVKVWDVRTH-------RLLQHYQLHSAAVNALS--FHPSGNYLL 245
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
SSD + I D R+LY L GH G F T S SD+Q+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Score = 231 (86.4 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 63/247 (25%), Positives = 105/247 (42%)
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
KGH++AI + ++ + Q+ S S D L W ++ + + A H V +C
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAV-TCVNFSPSGH 74
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SGS D T ++W +G F + +V F + T D VKVW +
Sbjct: 75 LLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +L H + + SPDG +++ D + +WD CV H F
Sbjct: 135 QKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT----SRECVHSYCEHG-GF 189
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
+ + P G+ + A S D V +WD + R+L H+ +VN FH + + +
Sbjct: 190 ---VTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLT 246
Query: 336 CSSDKQI 342
SSD +
Sbjct: 247 ASSDSTL 253
Score = 183 (69.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 52/193 (26%), Positives = 86/193 (44%)
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLR-K 215
+ SGS D +W M+ + F K +T V+FS + + +G D V++W K
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVK 93
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
GE S + H + + DG L+T D + +W +R + QH
Sbjct: 94 GE-STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST------HRQKFLFSLSQHI- 145
Query: 276 EKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
N ++C +SPDG + + S D+ V +WD TSR ++ H G V FH + I
Sbjct: 146 --NWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 335 SCSSDKQIYLGEI 347
+ S D + + ++
Sbjct: 204 AASMDNTVKVWDV 216
Score = 168 (64.2 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 47/161 (29%), Positives = 76/161 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTD 111
L+ H + V +F+P G +I S S D+ + LW +C + G +D H
Sbjct: 141 LSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH--PS 198
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G+ I +AS D T++ WDV T + ++ H++ VN+ G L+ + SD T K+ D
Sbjct: 199 GTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDS-TLKILD 257
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ + + T T V+FS + +GG D V VW
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 91/292 (31%), Positives = 140/292 (47%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L H + + N +G+ +GS+DR LW + L+GH+N + + +
Sbjct: 87 VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASG-EELNTLEGHRNVVYAIAFNNP 145
Query: 112 -GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
G +I + S DKT + W VETGK H + + C LV +GS D TAKLW
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI-VCLSFNPQSTLVATGSMDTTAKLW 204
Query: 171 DMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D++ + T +I ++SF+ + D+I TG D+ V VWD G L GH I
Sbjct: 205 DIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEI 264
Query: 230 TGMSLSPDGSYLLTNGMDCKLC-IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ S + D S +LT MD K C +WD A +CV L GH ++ L C + G
Sbjct: 265 SSASFNWDCSLILTGSMD-KTCKLWD----ATNGKCVATLTGHD---DEILDSC-FDYTG 315
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
+ S+D I+ +R+ + KL GH G +++ F+ + + SSDK
Sbjct: 316 KLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDK 367
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 87/300 (29%), Positives = 141/300 (47%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHK 100
T+S E + L GH++ VY + FN P G IA+GS D+ LW V G C + +GH
Sbjct: 121 TASGEE-LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC--YHTFRGHT 177
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
I+ L + + + + S D T + WD++ G+++ + H++ + S + G +++
Sbjct: 178 AEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR-IIT 236
Query: 161 GSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS 219
GS D T +WD + +I++ SF+ I TG +D K+WD G+
Sbjct: 237 GSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCV 296
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
TL GH D I G + T D I+ A +C+ LEGH E +
Sbjct: 297 ATLTGHDDEILDSCFDYTGKLIATASADGTARIFS----AATRKCIAKLEGH----EGEI 348
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
K ++P G+ + GSSD+ IWD + + L L GHT + F+ ++ + S D
Sbjct: 349 SKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 74/250 (29%), Positives = 120/250 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH + + + FNP T++A+GS D LW + + L+GH I+ L + T G +
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG-EEVYTLRGHSAEIISLSFNTSGDR 233
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
II+ S D T+ WD +TG+++ + H + ++S L+++GS D T KLWD
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSAS-FNWDCSLILTGSMDKTCKLWDATN 292
Query: 175 RGAIQTFPDKYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ T S D + K I T D +++ + L+GH+ I+ +S
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS 352
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
+P G++LLT D IWD A +C+++LEGH + C ++ G+ V
Sbjct: 353 FNPQGNHLLTGSSDKTARIWD----AQTGQCLQVLEGHTDE----IFSCAFNYKGNIVIT 404
Query: 294 GSSDRMVYIW 303
GS D IW
Sbjct: 405 GSKDNTCRIW 414
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 74/248 (29%), Positives = 118/248 (47%)
Query: 93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSR 152
F VLK H + ++ GS I+ S D+T + WD +G+++ + H + V + +
Sbjct: 85 FKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNN 144
Query: 153 RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ +GS D T KLW + TF +I +SF+ S + TG +D K+W
Sbjct: 145 PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLW 204
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
D++ GE TL+GH I +S + G ++T D + +WD A R V IL GH
Sbjct: 205 DIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD----ADTGRKVNILIGH 260
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
E + W D S + GS D+ +WD T+ + + L GH + +S F T
Sbjct: 261 CA--EISSASFNW--DCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 332 VIGSCSSD 339
+I + S+D
Sbjct: 317 LIATASAD 324
Score = 255 (94.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
+ L GH + + ++ FN +G I +GS D + +W K +L GH I +
Sbjct: 212 VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRK-VNILIGHCAEISSASFN 270
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
D S I++ S DKT + WD GK + + H+ + C G L+ + S DGTA++
Sbjct: 271 WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARI 329
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
+ R I + +I+ +SF+ + + TG D ++WD + G+ L+GH D
Sbjct: 330 FSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIW 253
I + + G+ ++T D IW
Sbjct: 390 IFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 152 (58.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 39/158 (24%), Positives = 70/158 (44%)
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLS-PDGSYLLTNG 245
+T V+ + + TG D K+WD GE TL+GH++++ ++ + P G + T
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGS 154
Query: 246 MDCKLC-IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
D K C +W + +C GH ++ ++P + V GS D +WD
Sbjct: 155 FD-KTCKLWSVET----GKCYHTFRGHT----AEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 305 TTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ +Y L GH+ + F+ + I + S D +
Sbjct: 206 IQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTV 243
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 89/300 (29%), Positives = 147/300 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVL---KGHKNAILDLHWT 109
L GH +A+ +KF+ G ++AS S D+ + LW N+ ++ +GH + I DL W+
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILW----SATNYSLIHRYEGHSSGISDLAWS 94
Query: 110 TDGSQIISASPDKTLRAWDVETGKQ-IKKMAEHNSFVNSCCPSRRGPP-LVVSGSDDGTA 167
+D SAS D TLR WD + + +K + H +FV C + P L+VSGS D T
Sbjct: 95 SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFV--FCVNFNPPSNLIVSGSFDETI 152
Query: 168 KLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGH 225
++W+++ ++ I++V F+ I + D K+WD ++G TL
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK 212
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
++ SP+G ++L +D L + YA + +K+ GH + + +S
Sbjct: 213 SPAVSFAKFSPNGKFILVATLDSTL---KLSNYAT-GKFLKVYTGHTNKVF--CITSAFS 266
Query: 286 -PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS--DKQI 342
+G + +GS D VY+WD +R IL +L GHT +V H + I S + DK I
Sbjct: 267 VTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTI 326
Score = 238 (88.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 64/257 (24%), Positives = 125/257 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH S + + ++ S S D + +W + VL+GH N + +++ +
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNL 142
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
I+S S D+T+R W+V+TGK ++ + H+ ++S +R G L+VS S DG+ K+WD ++
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS-LIVSASHDGSCKIWDAKE 201
Query: 175 RGAIQTFPDKYQITAVSFSDASDK---IYTGGIDNDVKVWDLRKGEVSMTLQGHQDM--- 228
++T D + AVSF+ S I +D+ +K+ + G+ GH +
Sbjct: 202 GTCLKTLIDD-KSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFC 260
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
IT +G Y+++ D + +WD++ ++ LEGH ++ P
Sbjct: 261 ITSAFSVTNGKYIVSGSEDNCVYLWDLQA----RNILQRLEGHTDA----VISVSCHPVQ 312
Query: 289 SKVTAGSS--DRMVYIW 303
+++++ + D+ + IW
Sbjct: 313 NEISSSGNHLDKTIRIW 329
Score = 235 (87.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 61/211 (28%), Positives = 102/211 (48%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
+ +L GH + V+ + FNP +I SGS D I +W V G C ++K H I +H+
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVR--MIKAHSMPISSVHF 178
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
DGS I+SAS D + + WD + G +K + + S S ++ + D T K
Sbjct: 179 NRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLK 238
Query: 169 LWDMRQRGAIQTFP---DKYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQG 224
L + ++ + +K +FS + K I +G DN V +WDL+ + L+G
Sbjct: 239 LSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEG 298
Query: 225 HQDMITGMSLSPDGSYLLTNG--MDCKLCIW 253
H D + +S P + + ++G +D + IW
Sbjct: 299 HTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 217 (81.4 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 66/262 (25%), Positives = 119/262 (45%)
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
++ L+GH AI + ++ DG+ + SAS DKT+ W I + H+S ++
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQR-GAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S S SDD T ++WD R ++ + V+F+ S+ I +G D +
Sbjct: 94 SSDSH-YTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETI 152
Query: 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268
++W+++ G+ ++ H I+ + + DGS +++ D IWD A + C+K L
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD----AKEGTCLKTL 208
Query: 269 EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN--ESVF 326
+ + K +SP+G + + D + + + + + L GHT V S F
Sbjct: 209 IDDKSP-AVSFAK--FSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAF 265
Query: 327 HATE-PVIGSCSSDKQIYLGEI 347
T I S S D +YL ++
Sbjct: 266 SVTNGKYIVSGSEDNCVYLWDL 287
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 88/300 (29%), Positives = 142/300 (47%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHK 100
T+S E + L GH++ VY + FN P G IA+GS D+ LW V G C + +GH
Sbjct: 121 TASGEE-LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC--YHTFRGHT 177
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
I+ L + + + + S D T + WD+++G+++ + H++ + S + G +++
Sbjct: 178 AEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNR-IIT 236
Query: 161 GSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS 219
GS D T +W+ + T +I++ F+ I TG +D K+WD G+
Sbjct: 237 GSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCV 296
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
TL GH D I G + T D I+ A CV LEGH E +
Sbjct: 297 ATLTGHDDEILDSCFDYTGKLIATASADGTARIFS----AATRECVTKLEGH----EGEI 348
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
K ++P G+++ GSSD+ IWD + + L L GHT + F+ +I + S D
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKD 408
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 89/292 (30%), Positives = 139/292 (47%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L H + + N +G+ +GS+DR LW + L+GH+N + + +
Sbjct: 87 VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASG-EELHTLEGHRNVVYAIAFNNP 145
Query: 112 -GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
G +I + S DKT + W VETGK H + + C LV +GS D TAKLW
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI-VCLSFNPQSTLVATGSMDTTAKLW 204
Query: 171 DMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D++ + T +I ++SF+ + ++I TG D+ V VW+ G TL GH I
Sbjct: 205 DIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEI 264
Query: 230 TGMSLSPDGSYLLTNGMDCKLC-IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + D S +LT MD K C +WD A +CV L GH ++ L C + G
Sbjct: 265 SSAVFNWDCSLILTGSMD-KTCKLWD----AVNGKCVATLTGHD---DEILDSC-FDYTG 315
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
+ S+D I+ +R + KL GH G +++ F+ + + SSDK
Sbjct: 316 KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDK 367
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 74/250 (29%), Positives = 119/250 (47%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH + + + FNP T++A+GS D LW + + F L GH I+ L + T G++
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVF-TLTGHSAEIISLSFNTSGNR 233
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
II+ S D T+ W+ +TG+++ + H + ++S L+++GS D T KLWD
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAV-FNWDCSLILTGSMDKTCKLWDAVN 292
Query: 175 RGAIQTFPDKYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ T S D + K I T D +++ E L+GH+ I+ +S
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKIS 352
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
+P G+ LLT D IWD A +C+++LEGH + C ++ G +
Sbjct: 353 FNPQGNRLLTGSSDKTARIWD----AQTGQCLQVLEGHTDE----IFSCAFNYKGDIIIT 404
Query: 294 GSSDRMVYIW 303
GS D IW
Sbjct: 405 GSKDNTCRIW 414
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 69/248 (27%), Positives = 115/248 (46%)
Query: 93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSR 152
F VL+ H + ++ GS I+ S D+T + WD +G+++ + H + V + +
Sbjct: 85 FKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 153 RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
+ +GS D T KLW + TF +I +SF+ S + TG +D K+W
Sbjct: 145 PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLW 204
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
D++ GE TL GH I +S + G+ ++T D + +W+ A R V L GH
Sbjct: 205 DIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE----ADTGRKVYTLIGH 260
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ W D S + GS D+ +WD + + + L GH + +S F T
Sbjct: 261 CAEISSAVFN--W--DCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 332 VIGSCSSD 339
+I + S+D
Sbjct: 317 LIATASAD 324
Score = 263 (97.6 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 56/205 (27%), Positives = 99/205 (48%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
+ LTGH + + ++ FN +G I +GS D + +W K + ++ GH I +
Sbjct: 212 VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI-GHCAEISSAVFN 270
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
D S I++ S DKT + WD GK + + H+ + C G L+ + S DGTA++
Sbjct: 271 WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARI 329
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
+ R + + +I+ +SF+ +++ TG D ++WD + G+ L+GH D
Sbjct: 330 FSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIW 253
I + + G ++T D IW
Sbjct: 390 IFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 40/162 (24%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLS-PDGSYLLTNG 245
+T V+ + + TG D K+WD GE TL+GH++++ ++ + P G + T
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS 154
Query: 246 MDCKLC-IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
D K C +W + +C GH ++ ++P + V GS D +WD
Sbjct: 155 FD-KTCKLWSVET----GKCYHTFRGHT----AEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 305 TTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
S ++ L GH+ + F+ + I + S D + + E
Sbjct: 206 IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 247
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 325 (119.5 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 82/293 (27%), Positives = 138/293 (47%)
Query: 37 PNGKQ-RTSSLESPIML-----------LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
PN KQ T S + +M+ GH + + F P+G+++AS S D+ + LW
Sbjct: 28 PNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLW 87
Query: 85 --HVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
+ G+ V K H ++ +H++ DG ++++AS DK+++ W VE K + + H
Sbjct: 88 TPSIKGEST---VFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHT 144
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIY 200
++V C L+ S DD T +LWD I F D Y T V F+ + I
Sbjct: 145 NWVR-CARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTD-YGGSATFVDFNSSGTCIA 202
Query: 201 TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP 260
+ G DN +K+WD+R ++ + H + S P G+YL++ D + I D+
Sbjct: 203 SSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLL---- 258
Query: 261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313
+ R + L GH+ +L +S DG +G +D V +W T + Y+
Sbjct: 259 EGRLIYTLHGHKGP----VLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYR 307
Score = 279 (103.3 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 78/305 (25%), Positives = 139/305 (45%)
Query: 44 SSLESPIML--LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
S +E P + GH+ + FNP +A+GS D+ + +W++ + F + GH +
Sbjct: 3 SVMEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV-GHTD 61
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
I +++ GS + S+S D+T+R W + H + V S SR G LV +
Sbjct: 62 VITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTA- 120
Query: 162 SDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
SDD + K+W + ++ + + + FS I + G D V++WD +
Sbjct: 121 SDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCIN 180
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNL 279
+ T + + G+ + ++G D + IWD+R N K+++ ++ HN N
Sbjct: 181 IFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRT----N---KLIQHYKVHNAGVNC 233
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
+ P G+ + +GSSD + I D R++Y L GH G V F + S +D
Sbjct: 234 FS--FHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGAD 291
Query: 340 KQIYL 344
Q+ +
Sbjct: 292 SQVLM 296
Score = 161 (61.7 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 50/206 (24%), Positives = 90/206 (43%)
Query: 145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGG 203
V SC + +GS D + +W++ + F IT V+F+ + + +
Sbjct: 20 VISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSS 79
Query: 204 IDNDVKVWDLR-KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D V++W KGE S + H + + S DG L+T D + +W + +
Sbjct: 80 RDQTVRLWTPSIKGE-STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVE----RK 134
Query: 263 RCVKILEGHQHNFEKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+ + L H N ++C +SPDG + + DR V +WDT+S + + + GS
Sbjct: 135 KFLYSLNRHT-----NWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSA 189
Query: 322 NESVFHATEPVIGSCSSDKQIYLGEI 347
F+++ I S +D I + +I
Sbjct: 190 TFVDFNSSGTCIASSGADNTIKIWDI 215
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 88/300 (29%), Positives = 140/300 (46%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHK 100
T+S E + L GH++ VY + FN P G +A+GS D+ LW G C F +GH
Sbjct: 121 TASGEE-LHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKC--FYTFRGHT 177
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
I+ L + + + + S D T + WDVE+G+++ +A H + + S C + G LV +
Sbjct: 178 AEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLV-T 236
Query: 161 GSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS 219
GS D TA LWD+ + + +I+ V F+ I T +D KVWD G+
Sbjct: 237 GSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCL 296
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
TL GH D + + + G + T D ++ + +C+ LEGH+ K
Sbjct: 297 ATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTF----QCLCQLEGHKGEISK-- 350
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
C ++ GS+V S D+ +W + L L GH+ + F+ I + S D
Sbjct: 351 -VC-FNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKD 408
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 81/291 (27%), Positives = 138/291 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD- 111
L H + + FN +G+ +GS+DR +W + L+GH+N + + +
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASG-EELHTLEGHRNVVYAIAFNNPY 146
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G ++ + S DKT + W ETGK H + + C LV +GS D TAKLWD
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEI-VCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ + T + +I ++ F+ D++ TG D+ +WD+ G L GH+ I+
Sbjct: 206 VESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEIS 265
Query: 231 GMSLSPDGSYLLTNGMDCKLC-IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289
+ + D S + T +D K C +WD A +C+ L GH N E +L ++ G
Sbjct: 266 CVQFNWDCSLIATASLD-KSCKVWD----AEGGQCLATLLGH--NDE--VLDVCFNYTGQ 316
Query: 290 KVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
+ S+D ++ T + + L +L GH G +++ F+A + + S DK
Sbjct: 317 LIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDK 367
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 70/248 (28%), Positives = 114/248 (45%)
Query: 93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSR 152
F L+ H + ++ + GS I+ S D+T + WD +G+++ + H + V + +
Sbjct: 85 FRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 153 RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
V +GS D T KLW TF +I ++F+ S + TG +D K+W
Sbjct: 145 PYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW 204
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
D+ GE TL GH I + + G L+T D +WD+ P R V +L GH
Sbjct: 205 DVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDV----PSGRKVHVLSGH 260
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ E + ++ W D S + S D+ +WD + L L GH V + F+ T
Sbjct: 261 RG--EISCVQFNW--DCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ 316
Query: 332 VIGSCSSD 339
+I + S+D
Sbjct: 317 LIATASAD 324
Score = 270 (100.1 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 74/280 (26%), Positives = 125/280 (44%)
Query: 28 PYSAPQAPGPNGKQ-RTSSLESPIMLLT--GHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
PY A G K + S E+ T GH + + + FNP T++A+GS D LW
Sbjct: 145 PYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW 204
Query: 85 HVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSF 144
V + L GH I+ L + T G ++++ S D T WDV +G+++ ++ H
Sbjct: 205 DVESG-EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGE 263
Query: 145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGG 203
+ SC L+ + S D + K+WD + T ++ V F+ I T
Sbjct: 264 I-SCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATAS 322
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D +V+ + L+GH+ I+ + + GS +LT +D +W ++ A
Sbjct: 323 ADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGA---- 378
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW 303
C+++LEGH + C ++ +G + GS D IW
Sbjct: 379 CLQVLEGHSDE----IFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 159 (61.0 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLS-PDGSYLLTNG 245
+T V+F+ + TG D K+WD GE TL+GH++++ ++ + P G + T
Sbjct: 95 LTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGS 154
Query: 246 MDCKLC-IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
D K C +W A +C GH ++ ++P + V GS D +WD
Sbjct: 155 FD-KTCKLWS----AETGKCFYTFRGHT----AEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 305 TTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
S + L GH + F+ T + + S D L ++
Sbjct: 206 VESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDV 248
Score = 114 (45.2 bits), Expect = 0.00092, P = 0.00092
Identities = 34/136 (25%), Positives = 55/136 (40%)
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
D RK + LQ H +T ++ + GS +T D IWD + LEGH
Sbjct: 78 DERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWD----TASGEELHTLEGH 133
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
++ +P G KV GS D+ +W + + Y GHT + F+
Sbjct: 134 RNVVYAIAFN---NPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST 190
Query: 332 VIGSCSSDKQIYLGEI 347
++ + S D L ++
Sbjct: 191 LVATGSMDTTAKLWDV 206
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 318 (117.0 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 82/299 (27%), Positives = 141/299 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV ++ F+P G +ASGS D + W + + +F KGH++ +L + W+ DG
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCKGHRHWVLSISWSPDG 168
Query: 113 SQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
++ S + + WD TGKQ+ + +A H+ ++ P P V S S DG+
Sbjct: 169 RKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSV 228
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD + Q +T + + +Y+ D +KVW G + TLQGH
Sbjct: 229 RIWDTTAGRCERILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ M+LS D Y L G + + P Q ++ E + NL++ G P
Sbjct: 288 HWVNTMALSTD--YALRTGA-FEPAEASVNPQDLQGSLQELKERALSRY--NLVR-GQGP 341
Query: 287 DGSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
+ ++ +GS D +++W ++ L ++ GH +N+ +F ++ S S DK I L
Sbjct: 342 E--RLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKL 398
Score = 233 (87.1 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 73/258 (28%), Positives = 120/258 (46%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+LTGH +V +++ G ++ S S DR I +W H D L+GH + + + +TD
Sbjct: 241 ILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHWVNTMALSTD 298
Query: 112 GSQIISA-SP-DKTLRAWDVETGKQ-IKKMA-EHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ A P + ++ D++ Q +K+ A + V +GP +VSGSDD T
Sbjct: 299 YALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRG-----QGPERLVSGSDDFTL 353
Query: 168 KLWDMRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
LW + T +Q I V FS S + + D +K+WD R G+ +L+GH
Sbjct: 354 FLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGH 413
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+ ++ S D L++ D L +WD++ + L GH + WS
Sbjct: 414 VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA----QKLAMDLPGHADE----VYAVDWS 465
Query: 286 PDGSKVTAGSSDRMVYIW 303
PDG +V +G D+ + IW
Sbjct: 466 PDGQRVASGGKDKCLRIW 483
Score = 232 (86.7 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 69/287 (24%), Positives = 126/287 (43%)
Query: 39 GKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLK 97
GKQ +L +TG + + NP +AS S D + +W G C+ +L
Sbjct: 188 GKQVGRTLAGHSKWITG--LSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCER--ILT 243
Query: 98 GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
GH ++ L W DG + SAS D+T++ W G + + H +VN+ S L
Sbjct: 244 GHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST-DYAL 301
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSF--SDASDKIYTGGIDNDVKVWDLRK 215
+ A + +G++Q ++ ++ + +++ +G D + +W +
Sbjct: 302 RTGAFEPAEASVNPQDLQGSLQELKER-ALSRYNLVRGQGPERLVSGSDDFTLFLWSPAE 360
Query: 216 GEVSMT-LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274
+ +T + GHQ +I + SPD + + D + +WD R + + L GH
Sbjct: 361 DKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT----GKYLASLRGHV-- 414
Query: 275 FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+ + WS D + +GSSD + +WD ++++ LPGH V
Sbjct: 415 --AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEV 459
Score = 202 (76.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 76/314 (24%), Positives = 131/314 (41%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S E+P GH+ V ++ ++P G +ASG + I LW + L GH I
Sbjct: 144 STETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWIT 203
Query: 105 DLHW-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
L W + + S+S D ++R WD G+ + + H V C G L+
Sbjct: 204 GLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVT--CLRWGGDGLLY 261
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDN---DVKVWDLRK 215
S S D T K+W +T + + ++ S + TG + V DL+
Sbjct: 262 SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEASVNPQDLQG 320
Query: 216 G--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
E+ +++ G P+ L++ D L +W P A + + + GHQ
Sbjct: 321 SLQELKERALSRYNLVRGQG--PER--LVSGSDDFTLFLWS--P-AEDKKPLTRMTGHQA 373
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
+ L +SPD V + S D+ + +WD + + L L GH +V + + A ++
Sbjct: 374 LINQVL----FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 334 GSCSSDKQIYLGEI 347
S SSD + + ++
Sbjct: 430 VSGSSDSTLKVWDV 443
Score = 152 (58.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+L+GH + + ++ SP G YL + D + WD+ P C +GH+H +L
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----KGHRHW----VL 160
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHT 318
WSPDG K+ +G + + +WD +T +++ L GH+
Sbjct: 161 SISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHS 199
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 319 (117.4 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 92/328 (28%), Positives = 152/328 (46%)
Query: 8 RENE-NALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFN 66
RE + + + TV E P P P K + + LL GH V ++F+
Sbjct: 127 RERDLDEMDTVGENEPETDPDRSPTPVPPPPPPKPESVNYRQKF-LLRGHLRGVSAVRFS 185
Query: 67 PAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRA 126
P ++IASG D + +W K +GH I + W+ DG+ I S S DKT+R
Sbjct: 186 PDASMIASGGADGAVKVWAASTG-KLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRL 244
Query: 127 WDVETGK-QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY 185
W+V TGK H+++V + S +G ++VSGS D LWD+R +++ P
Sbjct: 245 WNVLTGKAHPTPFIGHHNYVYAIAFSPKGN-MLVSGSYDEAVFLWDVRSARVMKSLPAHS 303
Query: 186 Q-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM--ITGMSLSPDGSYLL 242
++ + I + D V++WD G+ TL H+D ++ + SP+G Y+L
Sbjct: 304 DPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLV-HEDNPPVSSVKFSPNGKYVL 362
Query: 243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC---------GWSPDGSKVTA 293
+D + +WD Y + RC+K +GH N + +L G +P + +
Sbjct: 363 AWTLDDCVRLWD---YV-EGRCLKTYQGHS-NKKYSLSGAFGVYGQSIPGRTPGYAFAVS 417
Query: 294 GSSDRMVYIWDTTSRRILYKLPGHTGSV 321
GS D + WD ++++L ++ H G V
Sbjct: 418 GSEDGAILCWDVVTKKVLQRIEAHDGVV 445
Score = 206 (77.6 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 57/219 (26%), Positives = 107/219 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDG 112
GH + VY + F+P G ++ SGS+D +FLW V + L H + + +D+ W DG
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRS-ARVMKSLPAHSDPVSGIDVVW--DG 315
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMA-EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+ I S + D +R WD TG+ ++ + E N V+S S G V++ + D +LWD
Sbjct: 316 TLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGK-YVLAWTLDDCVRLWD 374
Query: 172 MRQRGAIQTFPD----KYQITAVSFSDASDKI------Y----TGGIDNDVKVWDLRKGE 217
+ ++T+ KY ++ +F I Y +G D + WD+ +
Sbjct: 375 YVEGRCLKTYQGHSNKKYSLSG-AFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKK 433
Query: 218 VSMTLQGHQDMITGMSL--SPDGSYLLTNGMDCKLCIWD 254
V ++ H ++ G+ + +G ++++ G+D + +W+
Sbjct: 434 VLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 202 (76.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 49/155 (31%), Positives = 84/155 (54%)
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM 246
++AV FS + I +GG D VKVW G++ T +GH I+ +S SPDG+ + +
Sbjct: 179 VSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSD 238
Query: 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306
D + +W++ + + GH HN+ + +SP G+ + +GS D V++WD
Sbjct: 239 DKTIRLWNV--LTGKAHPTPFI-GH-HNY---VYAIAFSPKGNMLVSGSYDEAVFLWDVR 291
Query: 307 SRRILYKLPGHTGSVN--ESVFHATEPVIGSCSSD 339
S R++ LP H+ V+ + V+ T +I SC++D
Sbjct: 292 SARVMKSLPAHSDPVSGIDVVWDGT--LIASCATD 324
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 317 (116.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 82/301 (27%), Positives = 142/301 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV ++ F+P G +ASGS D + W + + F KGH++ +L + W+ DG
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTA-KGHRHWVLSIAWSPDG 181
Query: 113 SQIISASPDKTLRAWDVETGKQIKK-MAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
++ S + + WD TG QI + + H+ ++ C P P + S S DG+
Sbjct: 182 KKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSI 241
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD + Q +T V + +Y+ D +KVW + G + TLQGH
Sbjct: 242 RIWDTLMGRCDKILTGHTQSVTCVKWG-GDGLLYSSSQDRTIKVWRSQDGILCRTLQGHA 300
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ M+LS D Y+L G + + P ++ + Q ++K ++ G P
Sbjct: 301 HWVNTMALSTD--YVLRTGA-FEPAEATINPQDMSGSLAELKDKAQQRYDK--VR-GQGP 354
Query: 287 DGSKVTAGSSDRMVYIW-DTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG 345
+ ++ +GS D +++W ++ L ++ GH +N+ +F +I S S DK I L
Sbjct: 355 E--RLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLW 412
Query: 346 E 346
E
Sbjct: 413 E 413
Score = 219 (82.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 72/299 (24%), Positives = 125/299 (41%)
Query: 52 LLTGHQSAVYTM-----KFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILD 105
+LTGH + + NP +AS S D I +W + G C +L GH ++
Sbjct: 207 VLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDK--ILTGHTQSVTC 264
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+ W DG + S+S D+T++ W + G + + H +VN+ S L +
Sbjct: 265 VKWGGDGL-LYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALST-DYVLRTGAFEPA 322
Query: 166 TAKLWDMRQRGAIQTFPDKYQITAVSF-SDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ- 223
A + G++ DK Q +++ +G D + +W R E L+
Sbjct: 323 EATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLW--RPAEDKKPLER 380
Query: 224 --GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
GHQ +I + SPD + + D + +W+ R + + L GH + +
Sbjct: 381 MTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRT----GKYLTSLRGHV----SAVYQ 432
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
WS D + +GSSD + +WD ++++ LPGH V + + + S DK
Sbjct: 433 IAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDK 491
Score = 211 (79.3 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 71/260 (27%), Positives = 115/260 (44%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD--CKNFMVLKGHKNAILDLHWT 109
+LTGH +V +K+ G ++ S S DR I +W C+ L+GH + + + +
Sbjct: 254 ILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRT---LQGHAHWVNTMALS 309
Query: 110 TDGSQIISA-SP-DKTLRAWDVETG-KQIKKMAEHN-SFVNSCCPSRRGPPLVVSGSDDG 165
TD A P + T+ D+ ++K A+ V +GP +VSGSDD
Sbjct: 310 TDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRG-----QGPERLVSGSDDF 364
Query: 166 TAKLW-DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
T LW + ++ I V FS + I + D +K+W+ R G+ +L+
Sbjct: 365 TLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLR 424
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + ++ S D L++ D L +WD A + L GH +
Sbjct: 425 GHVSAVYQIAWSADSRLLVSGSSDSTLKVWD----AETKKLAIDLPGHADE----VFATD 476
Query: 284 WSPDGSKVTAGSSDRMVYIW 303
WSPDG +V +G D+ + IW
Sbjct: 477 WSPDGQRVASGGKDKCLRIW 496
Score = 210 (79.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 80/310 (25%), Positives = 134/310 (43%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S E+P GH+ V ++ ++P G +ASG + IFLW + VL GH I
Sbjct: 157 STETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWIT 216
Query: 105 DLHW-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
L W + + SAS D ++R WD G+ K + H V C G L+
Sbjct: 217 CLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVT--CVKWGGDGLLY 274
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIY-TGGIDN---DVKVWDLR 214
S S D T K+W + +T + + ++ S +D + TG + + D+
Sbjct: 275 SSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALS--TDYVLRTGAFEPAEATINPQDMS 332
Query: 215 KG--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
E+ Q D + G P+ L++ D L +W RP A + ++ + GHQ
Sbjct: 333 GSLAELKDKAQQRYDKVRGQG--PER--LVSGSDDFTLFLW--RP-AEDKKPLERMTGHQ 385
Query: 273 HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPV 332
+ L +SPD + + S D+ + +W+ + + L L GH +V + + A +
Sbjct: 386 ALINQVL----FSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRL 441
Query: 333 IGSCSSDKQI 342
+ S SSD +
Sbjct: 442 LVSGSSDSTL 451
Score = 181 (68.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 42 RTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV-LKGHK 100
R + + P+ +TGHQ+ + + F+P +IAS S D+ I LW G ++ L+GH
Sbjct: 370 RPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWE--GRTGKYLTSLRGHV 427
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
+A+ + W+ D ++S S D TL+ WD ET K + H V + S G V S
Sbjct: 428 SAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQR-VAS 486
Query: 161 GSDDGTAKLW 170
G D ++W
Sbjct: 487 GGKDKCLRIW 496
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+L+GH + + ++ SP G YL + D + WD+ PQ +GH+H +L
Sbjct: 122 SLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTA----KGHRHW----VL 173
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHT 318
WSPDG K+ +G + +++WD T +I L GH+
Sbjct: 174 SIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHS 212
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 313 (115.2 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 85/303 (28%), Positives = 144/303 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV ++ F+P G +ASGS D + W + + +F +GH++ +L + W+ DG
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCQGHRHWVLSISWSPDG 169
Query: 113 SQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
++ S + + WD TGKQ+ + + H+ ++ + P P V S S DG+
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSV 229
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD +T Q +T + + +Y+ D +KVW G + TLQGH
Sbjct: 230 RVWDTTAGRCERTLTGHAQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 288
Query: 227 DMITGMSLSPDGSYLLTNGM----DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ M+LS D Y L G + + D+R + Q + L + NL++
Sbjct: 289 HWVNTMALSTD--YALRTGAFEPAEASVNAQDLRG-SLQELKERALSRY------NLVR- 338
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQ 341
G P+ ++ +GS D +++W ++ L ++ GH +N+ VF VI S S DK
Sbjct: 339 GQGPE--RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKS 396
Query: 342 IYL 344
I L
Sbjct: 397 IKL 399
Score = 231 (86.4 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 67/278 (24%), Positives = 121/278 (43%)
Query: 53 LTGHQSAVYTMKF-----NPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDL 106
LTGH + + + NP +AS S D + +W G C+ L GH ++ L
Sbjct: 196 LTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCER--TLTGHAQSVTCL 253
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
W DG + SAS D+T++ W G + + H +VN+ S L +
Sbjct: 254 RWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST-DYALRTGAFEPAE 311
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSF--SDASDKIYTGGIDNDVKVWDLRKGEVSMT-LQ 223
A + RG++Q ++ ++ + +++ +G D + +W + + + +
Sbjct: 312 ASVNAQDLRGSLQELKER-ALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMT 370
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GHQ +I + SPD + + D + +WD R + + L GH + +
Sbjct: 371 GHQALINQVVFSPDSRVIASASFDKSIKLWDGRT----GKYLASLRGHV----AAVYQIA 422
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
WS D + +GSSD + +WD ++++ LPGH V
Sbjct: 423 WSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEV 460
Score = 230 (86.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 73/257 (28%), Positives = 119/257 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
LTGH +V +++ G ++ S S DR I +W H D L+GH + + + +TD
Sbjct: 243 LTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHWVNTMALSTDY 300
Query: 113 SQIISA-SP-DKTLRAWDVETGKQ-IKKMA-EHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ A P + ++ A D+ Q +K+ A + V +GP +VSGSDD T
Sbjct: 301 ALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRG-----QGPERLVSGSDDFTLF 355
Query: 169 LWDMRQ--RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
LW + + + + I V FS S I + D +K+WD R G+ +L+GH
Sbjct: 356 LWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHV 415
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ ++ S D L++ D L +WD++ + L GH + WSP
Sbjct: 416 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKA----QKLSTDLPGHADE----VYAVDWSP 467
Query: 287 DGSKVTAGSSDRMVYIW 303
DG +V +G D+ + IW
Sbjct: 468 DGQRVASGGKDKCLRIW 484
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 75/314 (23%), Positives = 131/314 (41%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S E+P GH+ V ++ ++P G +ASG + I LW + L GH I
Sbjct: 145 STETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWIT 204
Query: 105 DLHW-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
L W + + S+S D ++R WD G+ + + H V C G L+
Sbjct: 205 ALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVT--CLRWGGDGLLY 262
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDN---DVKVWDLRK 215
S S D T K+W +T + + ++ S + TG + V DLR
Sbjct: 263 SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEASVNAQDLRG 321
Query: 216 G--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
E+ +++ G P+ L++ D L +W P A + + + GHQ
Sbjct: 322 SLQELKERALSRYNLVRGQG--PER--LVSGSDDFTLFLWS--P-AEDKKPLARMTGHQA 374
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
+ + +SPD + + S D+ + +WD + + L L GH +V + + A ++
Sbjct: 375 LINQVV----FSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 430
Query: 334 GSCSSDKQIYLGEI 347
S SSD + + ++
Sbjct: 431 VSGSSDSTLKVWDV 444
Score = 177 (67.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV-LKGHKNAILD 105
+ P+ +TGHQ+ + + F+P VIAS S D+ I LW G ++ L+GH A+
Sbjct: 363 KKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQ 420
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+ W+ D ++S S D TL+ WDV+ K + H V + S G V SG D
Sbjct: 421 IAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQR-VASGGKDK 479
Query: 166 TAKLW 170
++W
Sbjct: 480 CLRIW 484
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+L+GH + + ++ SP G YL + D + WD+ P C +GH+H +L
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHW----VL 161
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHT 318
WSPDG K+ +G + + +WD +T +++ L GH+
Sbjct: 162 SISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHS 200
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 325 (119.5 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 87/300 (29%), Positives = 142/300 (47%)
Query: 46 LESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFM--VLKGHKNAI 103
L SP GH AV ++ F+ ++AS S D + +W +F+ L+GH +
Sbjct: 253 LFSPAQF-KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDT---ATSFLQNTLEGHNEWV 308
Query: 104 LDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSD 163
+ ++ D + SAS D T++ WD TG + + HN V S S L+ SGS+
Sbjct: 309 KSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSR-LIASGSN 367
Query: 164 DGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D T ++W+ TF D + + AVSF+ S ++ + +VK+WD R G + L
Sbjct: 368 DRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVL 427
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+GH D + +S SPD L + D + IW +A + LEGH +++ ++++
Sbjct: 428 EGHDDCVNSVSFSPDSRLLASASDDRTVKIW----HAATGSLQRTLEGH-NDWVRSVV-- 480
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+S D + + S D V IWDT + + L H V VF ++ S S D +
Sbjct: 481 -FSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTV 539
Score = 305 (112.4 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 83/289 (28%), Positives = 131/289 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH V ++ F+ ++AS S D + +W M LKGH +++ + ++ D
Sbjct: 301 LEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRM-LKGHNDSVRSVVFSHDS 359
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
I S S D+T+R W+ TG +H V + + L S SD G K+WD
Sbjct: 360 RLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLA-SASDGGNVKIWDT 418
Query: 173 RQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
R G++Q + + + +VSFS S + + D VK+W G + TL+GH D +
Sbjct: 419 RT-GSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVR 477
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+ S D + + D + IWD QN LE H N+ ++++ +S D
Sbjct: 478 SVVFSHDSRLIASASDDMTVKIWDTATVPLQNN----LESHD-NWVRSVV---FSHDSRL 529
Query: 291 VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
+ + S D V IWDT + + L GH VN F ++ S S D
Sbjct: 530 LASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDD 578
Score = 264 (98.0 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 78/301 (25%), Positives = 136/301 (45%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L GH +V ++ F+ +IASGS+DR + +W + H+++++ + + D
Sbjct: 342 MLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRH-TFEDHEDSVMAVSFAHD 400
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKL 169
++ SAS ++ WD TG + H+ VNS P R L+ S SDD T K+
Sbjct: 401 SRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSR---LLASASDDRTVKI 457
Query: 170 WDMRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
W G++Q + + + +V FS S I + D VK+WD + L+ H +
Sbjct: 458 WHAAT-GSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDN 516
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ + S D L + D + IWD + +N LEGH + + +SPD
Sbjct: 517 WVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENT----LEGH----DDRVNSVSFSPD 568
Query: 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESV-FHATEPVIGSCSSDKQIYLGE 346
+ + S D V IW + + + G +G V S+ F T ++ S D + + +
Sbjct: 569 SRLLASASDDGTVKIWYAATGTVQHTFDG-SGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Query: 347 I 347
+
Sbjct: 628 M 628
Score = 253 (94.1 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 69/222 (31%), Positives = 111/222 (50%)
Query: 42 RTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHK 100
RT SL++ +L GH V ++ F+P ++AS S DR + +WH G + L+GH
Sbjct: 419 RTGSLQN---VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQR--TLEGHN 473
Query: 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
+ + + ++ D I SAS D T++ WD T + H+++V S S L+ S
Sbjct: 474 DWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSR-LLAS 532
Query: 161 GSDDGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
SDD T K+WD G+++ + + ++ +VSFS S + + D VK+W G V
Sbjct: 533 ASDDMTVKIWDTAT-GSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTV 591
Query: 219 SMTLQGHQDMITGMSLSPDGSYLLTNGMDC-KLCIWDMRPYA 259
T G + ++ S S LL + MD + IWDM Y+
Sbjct: 592 QHTFDGSGRVAISLAFSHT-SNLLASAMDDGTVKIWDMEIYS 632
Score = 171 (65.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L H + V ++ F+ ++AS S D + +W G +N L+GH + + + ++ D
Sbjct: 511 LESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLEN--TLEGHDDRVNSVSFSPD 568
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+ SAS D T++ W TG ++ + + V L+ S DDGT K+WD
Sbjct: 569 SRLLASASDDGTVKIWYAATGT-VQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Query: 172 MRQRGAIQTFPDKYQITAVSFSDASDKIYT--GGIDNDVKVWDLRKGEVSMTL-----QG 224
M TF ++I + F + + T G I D + S L QG
Sbjct: 628 MEIYSLRHTFDLDHEIQRIQFDKSMSSLITNVGRIQLDARSKATEGFASSQVLDRSQAQG 687
Query: 225 HQDMITGMSLSPDGSYLLTNG 245
H G LS D S++ NG
Sbjct: 688 HHPRRQGYGLSDDFSWITWNG 708
Score = 126 (49.4 bits), Expect = 0.00030, P = 0.00030
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+GH + +S S D L + D + IWD QN LEGH + + K+++
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNT----LEGH-NEWVKSVV-- 312
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+S D + + S D V IWDT + + L GH SV VF +I S S+D+ +
Sbjct: 313 -FSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTV 371
Query: 343 YLGE 346
+ E
Sbjct: 372 RIWE 375
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 309 (113.8 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 84/292 (28%), Positives = 137/292 (46%)
Query: 37 PNGKQ-RTSSLESPIMLLT-----------GHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
PNGKQ T S ++ +ML + GH+ + +++F+P G ++AS S DR I LW
Sbjct: 28 PNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLW 87
Query: 85 --HVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
G F K H + + ++ DG + SAS DK+++ W++ + + + H
Sbjct: 88 IPDKRGKSSEF---KAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHT 144
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITA-VSFSDASDKIYT 201
+V C L+VS S+D T K+WD + + F D V+F+ I +
Sbjct: 145 HWVR-CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIAS 203
Query: 202 GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ 261
G D+ VK+WD+R ++ Q H + +S P G+YL+T D L I D+ +
Sbjct: 204 AGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLL----E 259
Query: 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313
R + L+GH + +S G T+G +D V +W T + YK
Sbjct: 260 GRLIYTLQGHTGP----VFTVSFSKGGELFTSGGADAQVLLWRTNFDELNYK 307
Score = 300 (110.7 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 84/305 (27%), Positives = 145/305 (47%)
Query: 44 SSLESPIM--LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
SS E P++ GH++A+ ++ F+P G +A+GS D + LW + + F + GHK+
Sbjct: 3 SSPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV-GHKD 61
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
I + ++ G+ + SAS D+T+R W + + + H + V S S G + S
Sbjct: 62 VITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ-FLASA 120
Query: 162 SDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
S+D + K+W+M RQR + + + FS I + D +K+WD +
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNL 279
++ +P+G+ + + G D + IWD+R N K+L+ +Q H+ N
Sbjct: 181 NFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRV----N---KLLQHYQVHSGGVNC 233
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
+ + P G+ + SSD + I D R++Y L GHTG V F + S +D
Sbjct: 234 VS--FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGAD 291
Query: 340 KQIYL 344
Q+ L
Sbjct: 292 AQVLL 296
Score = 188 (71.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKI 199
H + + S S G L +GS D LW +R Q A + K IT+V FS + +
Sbjct: 17 HKAAITSVDFSPNGKQLA-TGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLL 75
Query: 200 YTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYA 259
+ D +++W K S + H + + S DG +L + D + +W+M Y
Sbjct: 76 ASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM--Y- 132
Query: 260 PQNRCVKILEGHQHNFEKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHT 318
+ R + L H H ++C +SPDG + + S D+ + IWDTT+++ +
Sbjct: 133 -RQRFLYSLYRHTH-----WVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFV 186
Query: 319 GSVNESVFHATEPVIGSCSSDKQIYLGEI 347
G N F+ I S SD + + +I
Sbjct: 187 GFANFVAFNPNGTCIASAGSDHTVKIWDI 215
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 313 (115.2 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 81/271 (29%), Positives = 131/271 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWH--VHGDCKNFMVLKGHKNAILDLHWTTDG 112
GH+ AVY +K++P G IAS DR I LW V C ++K H AI + ++ DG
Sbjct: 87 GHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCS---IIKAHCGAIRSMSFSADG 143
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNS--CCPSRRGPPLVVSGSDDGTAKLW 170
++S+S DKTL+ W ++ K + A H ++V S P R LV SGSDD T LW
Sbjct: 144 GYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMR---LVASGSDDKTVMLW 200
Query: 171 DMRQRGAIQ---TFPDKYQITAV-SFSDASDKI------------YTGGIDNDVKVWDLR 214
D+ + + T D +I+ + S+SD D + + D+ +K+ D+R
Sbjct: 201 DLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIR 260
Query: 215 KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274
++ H + +S+ P G +L + G D K+ IWD+R Q R + L ++
Sbjct: 261 SNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLR----QGRQIYTL----YS 312
Query: 275 FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+K++ ++ G G S + +W T
Sbjct: 313 NDKDITTVQFNQSGDYFATGGSQNLCMVWKT 343
Score = 214 (80.4 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 69/276 (25%), Positives = 121/276 (43%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ + F+P +AS S D +++W+ + F + GHK A+ + ++ DG
Sbjct: 45 GHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFV-GHKGAVYCVKYSPDGET 103
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
I S D+ +R W + + H + S S G L+ S SDD T KLW ++
Sbjct: 104 IASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLL-SSSDDKTLKLWRLQD 162
Query: 175 RGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM---TLQG------ 224
+ + +F K + + S + +G D V +WDL ++ TL
Sbjct: 163 KKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQ 222
Query: 225 ------HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278
H D ++ + PDG+ L+++ D K+ I D+R N+ ++ + H+ + N
Sbjct: 223 INSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIR----SNKLIQ--HYNAHDAQVN 276
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+ P G + + SD + IWD R +Y L
Sbjct: 277 SISI--HPTGYFLASAGSDSKIKIWDLRQGRQIYTL 310
Score = 202 (76.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 62/228 (27%), Positives = 100/228 (43%)
Query: 44 SSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV-LKGHKNA 102
++++S ++ H A+ +M F+ G + S S D+ + LW + K FM GHKN
Sbjct: 118 NTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQD--KKFMCSFAGHKNW 175
Query: 103 ILDLHWTTDGSQIISASPDKTLRAWDVETGK---------------QIKKMAEHNSFVNS 147
+ + D + S S DKT+ WD+ K QI ++H V+
Sbjct: 176 VRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQ 235
Query: 148 CCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDN 206
G L+ S S D K+ D+R IQ + Q+ ++S + + G D+
Sbjct: 236 VLFHPDGTCLI-SSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDS 294
Query: 207 DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC-IW 253
+K+WDLR+G TL + IT + + G Y T G LC +W
Sbjct: 295 KIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQ-NLCMVW 341
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 57/260 (21%), Positives = 110/260 (42%)
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
+GH++ I + Q+ S S D + W+ + ++ K H V S G
Sbjct: 44 RGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGET 103
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
+ G D +LW + I ++SFS + + D +K+W L+
Sbjct: 104 IASCGQDR-QIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQD 162
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCK-LCIWDMR------PYAPQNRCVKIL 268
+ + GH++ + +SPD L+ +G D K + +WD+ Y+ + VKI
Sbjct: 163 KKFMCSFAGHKNWVRSGVISPD-MRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKIS 221
Query: 269 EGHQHNFEKNLL-KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFH 327
+ + ++ + + + + PDG+ + + S D + I D S +++ H VN H
Sbjct: 222 QINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIH 281
Query: 328 ATEPVIGSCSSDKQIYLGEI 347
T + S SD +I + ++
Sbjct: 282 PTGYFLASAGSDSKIKIWDL 301
Score = 126 (49.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+S + +GH+D+IT P + + D + +W+ +P Q R K + GH K
Sbjct: 39 LSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKP---QQRPFKFV-GH-----K 89
Query: 278 NLLKC-GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
+ C +SPDG + + DR + +W T + + H G++ F A + S
Sbjct: 90 GAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSS 149
Query: 337 SSDKQIYL 344
S DK + L
Sbjct: 150 SDDKTLKL 157
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 307 (113.1 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 82/275 (29%), Positives = 133/275 (48%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH---WTTD 111
H S V + F+ G +A+G + R ++ V G + V + K+ L + ++ D
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G+ + + + DKT++ WD+ T K H + S S G +VSGS D AK+WD
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGR-FIVSGSGDKKAKIWD 397
Query: 172 MRQRGAIQTFPD-----KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
+ + T + K +T+V+ S + G +DN V++WD + G +GH
Sbjct: 398 IEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHL 457
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
D + ++ SPDG L + +D L +WD+ ++RC GH+ +F +L +SP
Sbjct: 458 DSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHK-DF---VLSVAFSP 513
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
DGS + +GS DR V WD + L GH SV
Sbjct: 514 DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSV 548
Score = 241 (89.9 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 65/210 (30%), Positives = 104/210 (49%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLK--GHKNAILDLHWTTD 111
GH+ +Y++ ++ G I SGS D+ +W + G C + + G KN + + + D
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G + + S D +R WD +TG +++ H V S S G L SGS D + KLWD
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLA-SGSLDKSLKLWD 485
Query: 172 M---RQRGAIQ-TFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
+ R R + TF K + +V+FS + +G D V+ WD R G M LQGH+
Sbjct: 486 LSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHK 545
Query: 227 DMITGMSLSP-DGSY--LLTNGMDCKLCIW 253
+ + ++LSP + S+ T D + +W
Sbjct: 546 NSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 224 (83.9 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 62/215 (28%), Positives = 101/215 (46%)
Query: 140 EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ------ITAVSFS 193
+HNS V CC + ++ + +A+++D+ + F D+ + I +V FS
Sbjct: 279 QHNSVV--CCVNFSNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFS 336
Query: 194 DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
+ + TG D VKVWD+ ++ T GH+ I + S DG ++++ D K IW
Sbjct: 337 PDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIW 396
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKN-LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY 312
D+ + +C L G++ KN + SPDG V AGS D +V +WD + L
Sbjct: 397 DIE----KGKCAFTL-GNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLE 451
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ GH SV F + S S DK + L ++
Sbjct: 452 RYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 303 (111.7 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 71/262 (27%), Positives = 126/262 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ V +++F+P G ++AS S D+ + LW + K+ K H + + ++ DG
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKS-SEFKAHTAPVRSVDFSADGQF 116
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
+++AS DK+++ W + + + + H +V C L+VS S+D T K+WD
Sbjct: 117 LVTASEDKSIKVWSMYRQRFLYSLYRHTHWVR-CAKFSPDGRLIVSCSEDKTIKIWDTTS 175
Query: 175 RGAIQTFPDKYQITA-VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + F D V FS I + G D+ V++WD+R + Q H + +S
Sbjct: 176 KQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLS 235
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
P G+ L+T D + I D+ + R + L+GH + +S DG T+
Sbjct: 236 FHPSGNSLVTASSDGTVKILDL----VEGRLIYTLQGHTGP----VFTVSFSKDGELFTS 287
Query: 294 GSSDRMVYIWDTTSRRILYKLP 315
G +D V +W T+ ++ Y+ P
Sbjct: 288 GGADAQVLVWRTSFNQVHYRDP 309
Score = 301 (111.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 85/303 (28%), Positives = 140/303 (46%)
Query: 44 SSLESPIM--LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
S E PI+ GH++A+ + F+P IA+ S D + LW + + + + GHK+
Sbjct: 3 SGPEDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKD 61
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
+ L ++ G+ + SAS DKT+R W ++ + + H + V S S G +V+
Sbjct: 62 VVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ-FLVTA 120
Query: 162 SDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
S+D + K+W M RQR + + + FS I + D +K+WD +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVN 180
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNL 279
+ SP+G+ + + G D + IWD+R NR +L+ +Q H+ N
Sbjct: 181 NFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR----MNR---LLQHYQVHSCGVNC 233
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
L + P G+ + SSD V I D R++Y L GHTG V F + S +D
Sbjct: 234 LS--FHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGAD 291
Query: 340 KQI 342
Q+
Sbjct: 292 AQV 294
Score = 180 (68.4 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 52/193 (26%), Positives = 88/193 (45%)
Query: 158 VVSGSDDGTAKLWDMRQRG-AIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL-RK 215
+ + S D LW ++ A + K +T++ FS + + + D V++W L RK
Sbjct: 33 IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRK 92
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
G+ S + H + + S DG +L+T D + +W M Y + R + L H H
Sbjct: 93 GK-SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM--Y--RQRFLYSLYRHTH-- 145
Query: 276 EKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
++C +SPDG + + S D+ + IWDTTS++ + G N F I
Sbjct: 146 ---WVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIA 202
Query: 335 SCSSDKQIYLGEI 347
S SD + + +I
Sbjct: 203 SAGSDHAVRIWDI 215
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 302 (111.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 80/282 (28%), Positives = 131/282 (46%)
Query: 37 PNGKQ-RTSSLESPIML-----------LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
PNGKQ T+S ++ +ML GH+ V +++F+P G ++AS S DR + LW
Sbjct: 28 PNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW 87
Query: 85 HVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSF 144
+ F K H + + ++ DG + +AS DK+++ W + + + + H +
Sbjct: 88 -IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW 146
Query: 145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITA-VSFSDASDKIYTGG 203
V C L+VS S+D T K+WD + + F D V F+ + I + G
Sbjct: 147 VR-CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAG 205
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D VKVWD+R ++ Q H + +S P G+YL+T D L I D+ + R
Sbjct: 206 SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLL----EGR 261
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ L+GH + +S G +G +D V +W T
Sbjct: 262 LIYTLQGHTGP----VFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 282 (104.3 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 77/305 (25%), Positives = 140/305 (45%)
Query: 44 SSLESPIM--LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
S+ E P++ GH++A+ ++ +P G +A+ S D + LW+ + + + GHK+
Sbjct: 3 SATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKD 61
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
+ + ++ G+ + SAS D+T+R W + + + H + V S S G + +
Sbjct: 62 VVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ-FLATA 120
Query: 162 SDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
S+D + K+W M RQR + + + FS I + D +K+WD +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNL 279
+ +P G+ + + G D + +WD+R N K+L+ +Q H+ N
Sbjct: 181 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV----N---KLLQHYQVHSGGVNC 233
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
+ + P G+ + SSD + I D R++Y L GHTG V F + S +D
Sbjct: 234 IS--FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Query: 340 KQIYL 344
Q+ L
Sbjct: 292 TQVLL 296
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 53/210 (25%), Positives = 95/210 (45%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG-AIQTFPDKYQITAVSFSDASDKI 199
H + + S S G L + S D LW+ + A + K +T+V FS + +
Sbjct: 17 HKAAITSLDLSPNGKQLATA-SWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 200 YTGGIDNDVKVW-DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+ D V++W ++G+ S + H + + S DG +L T D + +W M Y
Sbjct: 76 ASASRDRTVRLWIPDKRGKFS-EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM--Y 132
Query: 259 APQNRCVKILEGHQHNFEKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH 317
+ R + L H H ++C +SPDG + + S D+ + IWDTT+++ +
Sbjct: 133 --RQRFLYSLYRHTH-----WVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 318 TGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
G N F+ + I S SD+ + + ++
Sbjct: 186 VGFANFVDFNPSGTCIASAGSDQTVKVWDV 215
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 79/299 (26%), Positives = 139/299 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV ++ F+P G +ASGS D + W + + +F +GH++ +L + W+ DG
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCQGHRHWVLSISWSPDG 119
Query: 113 SQIISASPDKTLRAWDVETGKQIKK-MAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
+ S + + WD TGKQ+ + +A H+ ++ P P + S S DG+
Sbjct: 120 KTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSV 179
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD + Q +T + + +Y+ D +KVW G + TLQGH
Sbjct: 180 RVWDTTAGRCERILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 238
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ M+LS D Y L G + + Q ++ + + NL++ G P
Sbjct: 239 HWVNTMALSTD--YALRTGA-FEPAEASINAQDLQGSLQELKDRALRRY--NLVR-GQGP 292
Query: 287 DGSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
+ ++ +GS D +++W ++ L ++ GH +N+ +F +I S S DK I L
Sbjct: 293 E--RLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKL 349
Score = 232 (86.7 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 72/258 (27%), Positives = 120/258 (46%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+LTGH +V +++ G ++ S S DR I +W H D L+GH + + + +TD
Sbjct: 192 ILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHWVNTMALSTD 249
Query: 112 GSQIISA-SP-DKTLRAWDVETGKQ-IKKMA-EHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ A P + ++ A D++ Q +K A + V +GP +VSGSDD T
Sbjct: 250 YALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRG-----QGPERLVSGSDDFTL 304
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
+W + + + + I V FS S I + D +K+WD R G+ +L+GH
Sbjct: 305 FMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGH 364
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+ ++ S D L++ D L +WD++ + L GH + WS
Sbjct: 365 VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA----QKLAADLPGHADE----VYAVDWS 416
Query: 286 PDGSKVTAGSSDRMVYIW 303
PDG +V +G D+ + IW
Sbjct: 417 PDGQRVASGGKDKCLRIW 434
Score = 227 (85.0 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 67/279 (24%), Positives = 121/279 (43%)
Query: 52 LLTGHQSAVYTMKF-----NPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
+L GH + + + NP +AS S D + +W G C+ +L GH ++
Sbjct: 145 VLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCER--ILTGHTQSVTC 202
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
L W DG + SAS D+T++ W G + + H +VN+ S L +
Sbjct: 203 LRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST-DYALRTGAFEPA 260
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT-L 222
A + +G++Q D+ + V +++ +G D + +W + + + +
Sbjct: 261 EASINAQDLQGSLQELKDRALRRYNLVR-GQGPERLVSGSDDFTLFMWSPAEDKKPLARM 319
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
GHQ +I + SPD + + D + +WD R + + L GH + +
Sbjct: 320 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT----GKYLASLRGHV----AAVYQI 371
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
WS D + +GSSD + +WD ++++ LPGH V
Sbjct: 372 AWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEV 410
Score = 203 (76.5 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 75/314 (23%), Positives = 132/314 (42%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S E+P GH+ V ++ ++P G +ASG + I LW + VL GH I
Sbjct: 95 STETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWIT 154
Query: 105 DLHW-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
L W + + S+S D ++R WD G+ + + H V C G L+
Sbjct: 155 GLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVT--CLRWGGDGLLY 212
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDN---DVKVWDLRK 215
S S D T K+W +T + + ++ S + TG + + DL+
Sbjct: 213 SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEASINAQDLQG 271
Query: 216 G--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
E+ +++ G P+ L++ D L +W P A + + + GHQ
Sbjct: 272 SLQELKDRALRRYNLVRGQG--PER--LVSGSDDFTLFMWS--P-AEDKKPLARMTGHQA 324
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
+ L +SPD + + S D+ + +WD + + L L GH +V + + A ++
Sbjct: 325 LINQVL----FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 380
Query: 334 GSCSSDKQIYLGEI 347
S SSD + + ++
Sbjct: 381 VSGSSDSTLKVWDV 394
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+L+GH + + ++ SP G YL + D + WD+ P C +GH+H +L
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHW----VL 111
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHT 318
WSPDG + +G + + +WD +T +++ L GH+
Sbjct: 112 SISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHS 150
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 305 (112.4 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 85/298 (28%), Positives = 139/298 (46%)
Query: 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDG 112
TGH S +Y M FN G ++A+G D+ + +W V G K+ L G +I+ + ++ +
Sbjct: 321 TGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKS--TLLGASQSIVSVSFSPND 378
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEH--NSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I+ S D + R W+ E G+ + H + S R VV+GS D T KLW
Sbjct: 379 ESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSNR----VVTGSHDRTIKLW 434
Query: 171 DMRQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG-HQDM 228
D+++ +T F V + + +G +D+ V+ WD GE + L H+
Sbjct: 435 DLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQ 494
Query: 229 ITGMSLSPDGS-YLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
IT ++ SP + +LTN D L I D+R + ++ + ++ N K WSPD
Sbjct: 495 ITSITNSPTNTNQILTNSRDHTLKIIDIRTFDT----IRTFKDPEYRNGLNWTKASWSPD 550
Query: 288 GSKVTAGSSDRMVYIWDTTSRR---ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
G + +GS D + IWD T+ + +L K+ + SV + + S DK I
Sbjct: 551 GRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPLANIFISADKDKNI 608
Score = 211 (79.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 63/260 (24%), Positives = 121/260 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L G ++ ++ F+P I S+D LW+ G ++ L GH + + +
Sbjct: 362 LLGASQSIVSVSFSPNDESILGTSNDNSARLWNTELGRSRH--TLTGHIGKVYTGKFI-N 418
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+++++ S D+T++ WD++ G + + +S + G L SG D + + WD
Sbjct: 419 SNRVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLA-SGHVDHSVRFWD 477
Query: 172 MRQRGAIQTFPDKY--QITAVSFSDAS-DKIYTGGIDNDVKVWDLRKGEVSMTLQG--HQ 226
Q + QIT+++ S + ++I T D+ +K+ D+R + T + ++
Sbjct: 478 SNAGEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYR 537
Query: 227 DMI--TGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
+ + T S SPDG Y+ + +D +CIWD A + VK+L HN ++ C W
Sbjct: 538 NGLNWTKASWSPDGRYIASGSIDGSICIWD----ATNGKTVKVLT-KVHNNGSSVCCCSW 592
Query: 285 SPDGSKVTAGSSDRMVYIWD 304
SP + + D+ + W+
Sbjct: 593 SPLANIFISADKDKNIIQWE 612
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 301 (111.0 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 79/299 (26%), Positives = 138/299 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV ++ F+P G +ASGS D + W + + +F KGH++ +L + W+ DG
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCKGHRHWVLSISWSPDG 170
Query: 113 SQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
++ S + + WD TG Q+ + + H+ ++ P P V S S DG+
Sbjct: 171 KKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 230
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD + Q +T + + +Y+ D +KVW G + TLQGH
Sbjct: 231 RVWDTTAGRCERILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 289
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ M+LS D Y L G + + Q ++ E + NL++ G P
Sbjct: 290 HWVNTMALSTD--YALRTGA-FEPAEATVNAQDLQGSLKELKERASSRY--NLVR-GQGP 343
Query: 287 DGSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
+ ++ +GS D +++W ++ L ++ GH +N+ +F ++ S S DK I L
Sbjct: 344 E--RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKL 400
Score = 244 (91.0 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 74/257 (28%), Positives = 123/257 (47%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+LTGH +V +++ G ++ S S DR I +W H D L+GH + + + +TD
Sbjct: 243 ILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHWVNTMALSTD 300
Query: 112 GSQIISA-SP-DKTLRAWDVETG-KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ A P + T+ A D++ K++K+ A +S N +GP +VSGSDD T
Sbjct: 301 YALRTGAFEPAEATVNAQDLQGSLKELKERA--SSRYNLV--RGQGPERLVSGSDDFTLF 356
Query: 169 LWDMRQ--RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
LW + + + + I V FS S + + D +K+WD R G+ +L+GH
Sbjct: 357 LWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV 416
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ ++ S D L++ D L +WD++ + L GH + WSP
Sbjct: 417 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKA----QKLTTDLPGHADE----VYAVDWSP 468
Query: 287 DGSKVTAGSSDRMVYIW 303
DG +V +G D+ + IW
Sbjct: 469 DGQRVASGGKDKCLRIW 485
Score = 229 (85.7 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 69/284 (24%), Positives = 123/284 (43%)
Query: 53 LTGHQSAVYTMKF-----NPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDL 106
LTGH + + + NP +AS S D + +W G C+ +L GH ++ L
Sbjct: 197 LTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCER--ILTGHTQSVTCL 254
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPS-----RRG---PPLV 158
W DG + SAS D+T++ W G + + H +VN+ S R G P
Sbjct: 255 RWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 313
Query: 159 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
+ D L ++++R + +Y + +++ +G D + +W + +
Sbjct: 314 TVNAQDLQGSLKELKERAS-----SRYNLVR---GQGPERLVSGSDDFTLFLWSPAEDKK 365
Query: 219 SMT-LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ + GHQ +I + SPD + + D + +WD R + + L GH
Sbjct: 366 PLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT----GKYLASLRGHV----A 417
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+ + WS D + +GSSD + +WD ++++ LPGH V
Sbjct: 418 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEV 461
Score = 208 (78.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 76/314 (24%), Positives = 131/314 (41%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S E+P GH+ V ++ ++P G +ASG + I LW + L GH I
Sbjct: 146 STETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWIT 205
Query: 105 DLHW-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
L W + + S+S D ++R WD G+ + + H V C G L+
Sbjct: 206 GLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT--CLRWGGDGLLY 263
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDN---DVKVWDLRK 215
S S D T K+W +T + + ++ S + TG + V DL+
Sbjct: 264 SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEATVNAQDLQG 322
Query: 216 G--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
E+ +++ G P+ L++ D L +W P A + + + GHQ
Sbjct: 323 SLKELKERASSRYNLVRGQG--PER--LVSGSDDFTLFLWS--P-AEDKKPLARMTGHQA 375
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
+ L +SPD V + S D+ + +WD + + L L GH +V + + A ++
Sbjct: 376 LINQVL----FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 431
Query: 334 GSCSSDKQIYLGEI 347
S SSD + + ++
Sbjct: 432 VSGSSDSTLKVWDV 445
Score = 190 (71.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 48/167 (28%), Positives = 80/167 (47%)
Query: 46 LESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILD 105
L+ + L S+ Y + + SGS D +FLW D K + GH+ I
Sbjct: 320 LQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQ 379
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+ ++ D + SAS DK+++ WD TGK + + H + V S L+VSGS D
Sbjct: 380 VLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDS 438
Query: 166 TAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
T K+WD++ + P ++ AV +S ++ +GG D +++W
Sbjct: 439 TLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+L+GH + + ++ SP G YL + D + WD+ P C +GH+H +L
Sbjct: 111 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----KGHRHW----VL 162
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHT 318
WSPDG K+ +G + + +WD +T ++ L GH+
Sbjct: 163 SISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHS 201
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 300 (110.7 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 84/305 (27%), Positives = 144/305 (47%)
Query: 44 SSLESPIM--LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
S LE PI+ GH++A+ + F+P IA+ S D + LW + + + + GHK+
Sbjct: 3 SGLEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKD 61
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
+ L ++ G+ + SAS D+T+R W ++ + + H + V S S G L+V+
Sbjct: 62 VVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ-LLVTA 120
Query: 162 SDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
S+D + K+W M RQR + + + FS I + D +K+WD +
Sbjct: 121 SEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNL 279
+ +P+G+ + + G D + IWD+R N K+L+ +Q H+ N
Sbjct: 181 NFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIR----MN---KLLQHYQVHSCGVNC 233
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
L + P G+ + SSD V + D R++Y L GHTG V F ++ S +D
Sbjct: 234 LS--FHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGAD 291
Query: 340 KQIYL 344
Q+ +
Sbjct: 292 AQVLI 296
Score = 290 (107.1 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 70/252 (27%), Positives = 122/252 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ V +++F+P G ++AS S DR + LW + K+ K H + + ++ DG
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKS-SEFKAHTAPVRSVDFSADGQL 116
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
+++AS DK+++ W + + + + H +V C L+VS S+D T K+WD
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYSLYRHTHWVR-CAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 175 RGAIQTFPDKYQITA-VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + F D V F+ I + G D+ VK+WD+R ++ Q H + +S
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLS 235
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
P G+ L+T D + + D+ + R + L+GH + +S DG +T+
Sbjct: 236 FHPLGNSLVTASSDGTVKMLDLI----EGRLIYTLQGHTGP----VFTVSFSKDGELLTS 287
Query: 294 GSSDRMVYIWDT 305
G +D V IW T
Sbjct: 288 GGADAQVLIWRT 299
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 50/193 (25%), Positives = 87/193 (45%)
Query: 158 VVSGSDDGTAKLWDMRQRG-AIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL-RK 215
+ + S D LW ++ A + K +T++ FS + + + D V++W L RK
Sbjct: 33 IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRK 92
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
G+ S + H + + S DG L+T D + +W M + R + L H H
Sbjct: 93 GK-SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMF----RQRFLYSLYRHTH-- 145
Query: 276 EKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
++C +SPDG + + S D+ + IWDTT+++ + G N F+ I
Sbjct: 146 ---WVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA 202
Query: 335 SCSSDKQIYLGEI 347
S SD + + +I
Sbjct: 203 SAGSDHAVKIWDI 215
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 299 (110.3 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 79/299 (26%), Positives = 138/299 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV ++ F+P G +ASGS D + W + + +F KGH++ +L + W+ DG
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCKGHRHWVLSISWSPDG 168
Query: 113 SQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
++ S + + WD TG Q+ + + H+ ++ P P V S S DG+
Sbjct: 169 KKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 228
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD + Q +T + + +Y+ D +KVW G + TLQGH
Sbjct: 229 RVWDTTAGRCERILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ M+LS D Y L G + + Q ++ E + NL++ G P
Sbjct: 288 HWVNTMALSTD--YALRTGA-FEPAEATVNAQDLQGSLKELKERASSRY--NLVR-GQGP 341
Query: 287 DGSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
+ ++ +GS D +++W ++ L ++ GH +N+ +F ++ S S DK I L
Sbjct: 342 E--RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKL 398
Score = 244 (91.0 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 74/257 (28%), Positives = 123/257 (47%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+LTGH +V +++ G ++ S S DR I +W H D L+GH + + + +TD
Sbjct: 241 ILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHWVNTMALSTD 298
Query: 112 GSQIISA-SP-DKTLRAWDVETG-KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ A P + T+ A D++ K++K+ A +S N +GP +VSGSDD T
Sbjct: 299 YALRTGAFEPAEATVNAQDLQGSLKELKERA--SSRYNLV--RGQGPERLVSGSDDFTLF 354
Query: 169 LWDMRQ--RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
LW + + + + I V FS S + + D +K+WD R G+ +L+GH
Sbjct: 355 LWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV 414
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ ++ S D L++ D L +WD++ + L GH + WSP
Sbjct: 415 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKA----QKLATDLPGHADE----VYAVDWSP 466
Query: 287 DGSKVTAGSSDRMVYIW 303
DG +V +G D+ + IW
Sbjct: 467 DGQRVASGGKDKCLRIW 483
Score = 229 (85.7 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 69/284 (24%), Positives = 123/284 (43%)
Query: 53 LTGHQSAVYTMKF-----NPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDL 106
LTGH + + + NP +AS S D + +W G C+ +L GH ++ L
Sbjct: 195 LTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCER--ILTGHTQSVTCL 252
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPS-----RRG---PPLV 158
W DG + SAS D+T++ W G + + H +VN+ S R G P
Sbjct: 253 RWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 311
Query: 159 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
+ D L ++++R + +Y + +++ +G D + +W + +
Sbjct: 312 TVNAQDLQGSLKELKERAS-----SRYNLVR---GQGPERLVSGSDDFTLFLWSPAEDKK 363
Query: 219 SMT-LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ + GHQ +I + SPD + + D + +WD R + + L GH
Sbjct: 364 PLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT----GKYLASLRGHV----A 415
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+ + WS D + +GSSD + +WD ++++ LPGH V
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEV 459
Score = 207 (77.9 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 75/314 (23%), Positives = 131/314 (41%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S E+P GH+ V ++ ++P G +ASG + + LW + L GH I
Sbjct: 144 STETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWIT 203
Query: 105 DLHW-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
L W + + S+S D ++R WD G+ + + H V C G L+
Sbjct: 204 GLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT--CLRWGGDGLLY 261
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDN---DVKVWDLRK 215
S S D T K+W +T + + ++ S + TG + V DL+
Sbjct: 262 SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEATVNAQDLQG 320
Query: 216 G--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
E+ +++ G P+ L++ D L +W P A + + + GHQ
Sbjct: 321 SLKELKERASSRYNLVRGQG--PER--LVSGSDDFTLFLWS--P-AEDKKPLARMTGHQA 373
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
+ L +SPD V + S D+ + +WD + + L L GH +V + + A ++
Sbjct: 374 LINQVL----FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 334 GSCSSDKQIYLGEI 347
S SSD + + ++
Sbjct: 430 VSGSSDSTLKVWDV 443
Score = 190 (71.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 48/167 (28%), Positives = 80/167 (47%)
Query: 46 LESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILD 105
L+ + L S+ Y + + SGS D +FLW D K + GH+ I
Sbjct: 318 LQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQ 377
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+ ++ D + SAS DK+++ WD TGK + + H + V S L+VSGS D
Sbjct: 378 VLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDS 436
Query: 166 TAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVW 211
T K+WD++ + P ++ AV +S ++ +GG D +++W
Sbjct: 437 TLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+L+GH + + ++ SP G YL + D + WD+ P C +GH+H +L
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----KGHRHW----VL 160
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHT 318
WSPDG K+ +G + V +WD +T ++ L GH+
Sbjct: 161 SISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHS 199
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 299 (110.3 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 83/302 (27%), Positives = 137/302 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
+ GH AV ++ F+P G +ASGS D + LW ++ + +F GHK +L + W DG
Sbjct: 115 MPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHF-TCTGHKQWVLCVSWAPDG 173
Query: 113 SQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
++ S ++ WD ETG+Q + ++ H +N P R P + S S DG
Sbjct: 174 KRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDC 233
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD++ + +TAV + A IYT D VK+W G + T GH
Sbjct: 234 RIWDVKLGQCLMNIAGHTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSGHA 292
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP-QNRCVKILEGHQHNFEKNLLKCGWS 285
+ ++LS D Y+L G P+ P ++R L +++ LK +
Sbjct: 293 HWVNNIALSTD--YVLRTG-----------PFHPVKDRSKSHLSLSTEELQESALKRYQA 339
Query: 286 --PDG-SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
PD + + S D +Y+W + + ++ GH VN+ + +I S S DK +
Sbjct: 340 VCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSV 399
Query: 343 YL 344
L
Sbjct: 400 RL 401
Score = 219 (82.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 80/305 (26%), Positives = 134/305 (43%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
E+P TGH+ V + + P G +ASG I +W + L GHK I L
Sbjct: 151 ETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCL 210
Query: 107 HWTT-----DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
W + ++ SAS D R WDV+ G+ + +A H + V + G L+ +
Sbjct: 211 AWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAV--RWGGAGLIYTS 268
Query: 162 SDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
S D T K+W +TF + + ++ S +D + G + VK D K +S+
Sbjct: 269 SKDRTVKMWRAADGILCRTFSGHAHWVNNIALS--TDYVLRTGPFHPVK--DRSKSHLSL 324
Query: 221 TLQGHQDMITG--MSLSPDG-SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
+ + Q+ ++ PD L++ D L +W QN+CV+ + GHQ+
Sbjct: 325 STEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNN----QNKCVERMTGHQNVV-- 378
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
N +K +SPD + + S D+ V +W + + + GH +V + A +I S S
Sbjct: 379 NDVK--YSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGS 436
Query: 338 SDKQI 342
D +
Sbjct: 437 KDSTL 441
Score = 207 (77.9 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 68/281 (24%), Positives = 121/281 (43%)
Query: 53 LTGHQSAVYTMKF-----NPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDL 106
L+GH+ + + + +P +AS S D D +W V G C M + GH NA+ +
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQC--LMNIAGHTNAVTAV 257
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPS-----RRGPPLVVSG 161
W G I ++S D+T++ W G + + H +VN+ S R GP V
Sbjct: 258 RWGGAGL-IYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKD 316
Query: 162 SDDGTAKL-WDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
L + Q A++ +YQ AV D + + + DN + +W + +
Sbjct: 317 RSKSHLSLSTEELQESALK----RYQ--AVC-PDEVESLVSCSDDNTLYLWRNNQNKCVE 369
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+ GHQ+++ + SPD + + D + +W A + + GH + +
Sbjct: 370 RMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWR----ASDGQYMATFRGHV----QAVY 421
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
WS D + +GS D + +W ++++ +LPGH V
Sbjct: 422 TVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEV 462
Score = 204 (76.9 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 60/262 (22%), Positives = 115/262 (43%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD--CKNFMVLKGHKNAILDLH 107
+M + GH +AV +++ AG + S S DR + +W C+ F GH + + ++
Sbjct: 244 LMNIAGHTNAVTAVRWGGAGLIYTS-SKDRTVKMWRAADGILCRTF---SGHAHWVNNIA 299
Query: 108 WTTDGSQIISASP-----DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162
+TD ++ P D++ + T +++++ A + CP +VS S
Sbjct: 300 LSTD--YVLRTGPFHPVKDRSKSHLSLST-EELQESALKR--YQAVCPDE--VESLVSCS 352
Query: 163 DDGTAKLWDMRQRGAIQTFPDKYQITA-VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
DD T LW Q ++ + V +S I + D V++W G+ T
Sbjct: 353 DDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMAT 412
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
+GH + ++ S D +++ D L +W ++ + + L GH +
Sbjct: 413 FRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQT----KKLAQELPGHADE----VFG 464
Query: 282 CGWSPDGSKVTAGSSDRMVYIW 303
W+PDGS+V +G D+++ +W
Sbjct: 465 VDWAPDGSRVASGGKDKVIKLW 486
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
++ GH + + ++ SPDG++L + D + +WD+ P C GH K +
Sbjct: 114 SMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCT----GH-----KQWV 164
Query: 281 KC-GWSPDGSKVTAGSSDRMVYIWDT-TSRRILYKLPGHTGSVN 322
C W+PDG ++ +G + IWD T ++ L GH +N
Sbjct: 165 LCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHIN 208
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 298 (110.0 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 87/301 (28%), Positives = 143/301 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
+ GH AV + F+P G +ASGS D + LW ++ + F KGHKN +L + W+ DG
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLF-TCKGHKNWVLTVAWSPDG 163
Query: 113 SQIISASPDKTLRAWDVETGK-QIKKMAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
++S S + W+ + G+ + + H ++ P P V+ S DG A
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 223
Query: 168 KLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD+ + +I +T V + IYTG D +K+W+ +G++ L+GH
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWG-GDGIIYTGSQDCTIKMWETTQGKLIRELKGHG 282
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDM--RPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
I ++LS + Y+L G +D R Y P K LE ++N K G
Sbjct: 283 HWINSLALSTE--YVLRTGA------FDHTGRQYPPNEEKQKALE--RYNKTK-----GD 327
Query: 285 SPDGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
SP+ ++ +GS D +++W+ + S++ +L GH VN F I S S DK +
Sbjct: 328 SPE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 385
Query: 344 L 344
L
Sbjct: 386 L 386
Score = 228 (85.3 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTV-----IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLH 107
LTGH+ + + + P + S D D +W + K+ + L GH A+ +
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLK-KSIICLSGHTLAVTCVK 248
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
W DG I + S D T++ W+ GK I+++ H ++NS S ++ +G+ D T
Sbjct: 249 WGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEY--VLRTGAFDHTG 305
Query: 168 KLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGHQ 226
+ + + Q ++Y T D+ +++ +G D + +W+ + L GHQ
Sbjct: 306 RQYPPNEEK--QKALERYNKTK---GDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQ 360
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
++ + SPDG ++ + D + +W+ + V + GH + + WS
Sbjct: 361 QLVNHVYFSPDGKWIASASFDKSVRLWN----GITGQFVTVFRGHVGP----VYQVSWSA 412
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
D + +GS D + IW+ ++++ LPGH V
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEV 447
Score = 224 (83.9 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 81/290 (27%), Positives = 128/290 (44%)
Query: 22 MEWSTVPYSAP----QAPGPNGKQRT--SSLESPIMLLTGHQSAVYTMKFNPAGTVIASG 75
+ W V S+P +G R +L+ I+ L+GH AV +K+ G +I +G
Sbjct: 200 ISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTG 258
Query: 76 SHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI 135
S D I +W K LKGH + I L +T+ + + + D T R + KQ
Sbjct: 259 SQDCTIKMWETTQG-KLIRELKGHGHWINSLALSTE-YVLRTGAFDHTGRQYPPNEEKQ- 315
Query: 136 KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD--MRQRGAIQTFPDKYQITAVSFS 193
K + +N P R +VSGSDD T LW+ + ++ + + + V FS
Sbjct: 316 KALERYNK-TKGDSPER-----LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFS 369
Query: 194 DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
I + D V++W+ G+ +GH + +S S D LL+ D L IW
Sbjct: 370 PDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIW 429
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW 303
++R + + L GH + WSPDG KV +G DR++ +W
Sbjct: 430 EIRT----KKLKQDLPGHADE----VFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 76/308 (24%), Positives = 141/308 (45%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E+P+ GH++ V T+ ++P G + SGS +I W+ G+ + L GHK I
Sbjct: 141 ETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEG-SPLTGHKKWITG 199
Query: 106 LHW-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
+ W ++ + +++S D R WD+ K I ++ H V C G ++ +
Sbjct: 200 ISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVT--CVKWGGDGIIYT 257
Query: 161 GSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS 219
GS D T K+W+ Q I+ + I +++ S + TG D+ + + + E
Sbjct: 258 GSQDCTIKMWETTQGKLIRELKGHGHWINSLALS-TEYVLRTGAFDHTGRQYPPNE-EKQ 315
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
L+ + + G S P+ L++ D + +W+ P + + K L GHQ ++
Sbjct: 316 KALERY-NKTKGDS--PER--LVSGSDDFTMFLWE--P-SVSKQPKKRLTGHQQ-LVNHV 366
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
+SPDG + + S D+ V +W+ + + + GH G V + + A ++ S S D
Sbjct: 367 Y---FSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKD 423
Query: 340 KQIYLGEI 347
+ + EI
Sbjct: 424 STLKIWEI 431
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/165 (26%), Positives = 74/165 (44%)
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM 246
+ VSFS ++ +G D V++WDL T +GH++ + ++ SPDG +L++
Sbjct: 112 VLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSK 171
Query: 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP-----DGSKVTAGSSDRMVY 301
++C W+ + + L GH+ K + W P + S D
Sbjct: 172 SGEICCWNPKKGELEG---SPLTGHK----KWITGISWEPVHLSSPCRRFVTSSKDGDAR 224
Query: 302 IWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
IWD T ++ + L GHT +V V + +I + S D I + E
Sbjct: 225 IWDITLKKSIICLSGHTLAVT-CVKWGGDGIIYTGSQDCTIKMWE 268
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 219 SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278
S T+ GH + + +S SPDG L + D + +WD+ P C +GH+ N+
Sbjct: 102 SQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTC----KGHK-NW--- 153
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK-LPGH----TGSVNESVFHATEPVI 333
+L WSPDG + +GS + W+ + L GH TG E V H + P
Sbjct: 154 VLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPV-HLSSPCR 212
Query: 334 GSCSSDK 340
+S K
Sbjct: 213 RFVTSSK 219
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 302 (111.4 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 85/283 (30%), Positives = 142/283 (50%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLH-----WTT 110
H+S V ++F+ G +A+G + R ++ V+ K ++ + + DL+ ++
Sbjct: 298 HESVVCCVRFSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 111 DGSQIISASPDKTLRAWDVETGKQIK-KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
DG + + + DK +R WD+ T + I+ + A H + S +R G + SGS D T +L
Sbjct: 357 DGKYLATGAEDKQIRVWDITT-RTIRIQFAGHEQDIYSLDFARDGRT-IASGSGDRTVRL 414
Query: 170 WDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG---HQ 226
WD+ A+ F + +T V+ S + + G +D V+VWDL +G L+G H+
Sbjct: 415 WDIENGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHK 474
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMR-PYAP-QN------RCVKILEGHQHNFEKN 278
D + ++ SP+G L+T +D + +W++ P QN RCVK EGH+ +F
Sbjct: 475 DSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHR-DF--- 530
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+L +PD V +GS DR V WD + L GH SV
Sbjct: 531 VLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSV 573
Score = 266 (98.7 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 69/260 (26%), Positives = 122/260 (46%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMV-LKGHKNAILDLHWTTDGSQIISASPDKT 123
F+P G +A+G+ D+ I +W + + + GH+ I L + DG I S S D+T
Sbjct: 354 FSPDGKYLATGAEDKQIRVWDI--TTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRT 411
Query: 124 LRAWDVETGKQIKKMAEHNSFVN-SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF- 181
+R WD+E G + + + P + V +GS D + ++WD+ Q ++
Sbjct: 412 VRLWDIENGTALTVFTIEDGVTTVAISPDTK---YVAAGSLDKSVRVWDLTQGCPVERLE 468
Query: 182 -PD--KYQITAVSFSDASDKIYTGGIDNDVKVWDL------------RKGEVSMTLQGHQ 226
PD K + +V+FS + TG +D +K+W+L + G T +GH+
Sbjct: 469 GPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHR 528
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
D + ++L+PD ++++ D + WD R + Q +L+GH+++ ++ SP
Sbjct: 529 DFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQ----LMLQGHKNS----VISVAPSP 580
Query: 287 DGSKVTAGSSDRMVYIWDTT 306
G GS D IW T
Sbjct: 581 TGGFFATGSGDMRARIWSYT 600
Score = 227 (85.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 60/216 (27%), Positives = 105/216 (48%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGS 113
GH+ +Y++ F G IASGS DR + LW + +G ++ + + + + D
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIE---DGVTTVAISPDTK 442
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAE---HNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
+ + S DK++R WD+ G ++++ H V S S G LV +GS D T KLW
Sbjct: 443 YVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLV-TGSLDKTIKLW 501
Query: 171 D-------MRQRGA-----IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGE 217
+ M+ +G+ ++TF + +V+ + + + +G D V+ WD R G
Sbjct: 502 ELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGS 561
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
+ LQGH++ + ++ SP G + T D + IW
Sbjct: 562 TQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TLQ H+ ++ + S DG Y+ T G + I+D+ + CV + + +
Sbjct: 295 TLQ-HESVVCCVRFSADGKYVAT-GCNRSAQIFDVN--TGEKVCVLQDDNADTTGDLYIR 350
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
+SPDG + G+ D+ + +WD T+R I + GH + F I S S D+
Sbjct: 351 SVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDR 410
Query: 341 QIYLGEI 347
+ L +I
Sbjct: 411 TVRLWDI 417
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 295 (108.9 bits), Expect = 4.4e-26, P = 4.4e-26
Identities = 71/252 (28%), Positives = 118/252 (46%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ V +++F+P G ++AS S DR + LW + F K H + + ++ DG
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQF 74
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
+ +AS DK+++ W + + + + H +V C L+VS S+D T K+WD
Sbjct: 75 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVR-CAKFSPDGRLIVSCSEDKTIKIWDTTN 133
Query: 175 RGAIQTFPDKYQITA-VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + F D V F+ + I + G D VKVWD+R ++ Q H + +S
Sbjct: 134 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 193
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
P G+YL+T D L I D+ + R + L+GH + +S G +
Sbjct: 194 FHPSGNYLITASSDGTLKILDLL----EGRLIYTLQGHTGP----VFTVSFSKGGELFAS 245
Query: 294 GSSDRMVYIWDT 305
G +D V +W T
Sbjct: 246 GGADTQVLLWRT 257
Score = 229 (85.7 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 66/264 (25%), Positives = 117/264 (44%)
Query: 83 LWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
LW+ + + + GHK+ + + ++ G+ + SAS D+T+R W + + + H
Sbjct: 2 LWNFKPHARAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASDKIYT 201
+ V S S G + + S+D + K+W M RQR + + + FS I +
Sbjct: 61 APVRSVDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 119
Query: 202 GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ 261
D +K+WD + + +P G+ + + G D + +WD+R
Sbjct: 120 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV---- 175
Query: 262 NRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGS 320
N K+L+ +Q H+ N + + P G+ + SSD + I D R++Y L GHTG
Sbjct: 176 N---KLLQHYQVHSGGVNCIS--FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGP 230
Query: 321 VNESVFHATEPVIGSCSSDKQIYL 344
V F + S +D Q+ L
Sbjct: 231 VFTVSFSKGGELFASGGADTQVLL 254
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 46/182 (25%), Positives = 85/182 (46%)
Query: 169 LWDMRQRG-AIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVW-DLRKGEVSMTLQGHQ 226
LW+ + A + K +T+V FS + + + D V++W ++G+ S + H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS-EFKAHT 60
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG-WS 285
+ + S DG +L T D + +W M Y + R + L H H ++C +S
Sbjct: 61 APVRSVDFSADGQFLATASEDKSIKVWSM--Y--RQRFLYSLYRHTH-----WVRCAKFS 111
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG 345
PDG + + S D+ + IWDTT+++ + G N F+ + I S SD+ + +
Sbjct: 112 PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
Query: 346 EI 347
++
Sbjct: 172 DV 173
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 282 (104.3 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 79/300 (26%), Positives = 142/300 (47%)
Query: 54 TGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
TGH V ++ P +G ++ S S D I LW V+ + + GH A+ D+ + G
Sbjct: 284 TGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSG 343
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDGTAKL 169
+Q +SA+ D+ ++ WD ETG+ I + N V C P L+V+G D
Sbjct: 344 TQFLSAAYDRYIKLWDSETGQCISRFT--NRKVPYCVKFNPDEDKQNLLVAGMSDKKIVQ 401
Query: 170 WDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTLQGHQ 226
WD+R +Q + D++ + ++F D + + + D ++VW+ + +
Sbjct: 402 WDIRSGEVVQEY-DRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYIAEPSM 460
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ ++LSP+G +L MD ++ I+ + N+ KI +GH + +SP
Sbjct: 461 HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQVDFSP 517
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDKQIYL 344
D S V +G +D + IWD + ++ +++ H +++H T VI +C D QI L
Sbjct: 518 DMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETSKVI-TCGWDGQIKL 576
Score = 125 (49.1 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 41/204 (20%), Positives = 83/204 (40%)
Query: 61 YTMKFNP---AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIIS 117
Y +KFNP ++ +G D+ I W + + H A+ + + + + +S
Sbjct: 376 YCVKFNPDEDKQNLLVAGMSDKKIVQWDIRSG-EVVQEYDRHLGAVNTITFVDENRRFVS 434
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSF-VNSCCPSRRGPPLVVSGSDD-----GTAKLWD 171
S DK+LR W+ + K +AE + + + S G L D+ G +
Sbjct: 435 TSDDKSLRVWEWDIPADFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 494
Query: 172 MRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
+ ++ + V FS + +G D + +WD + ++ ++ H +
Sbjct: 495 LNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCIS 554
Query: 232 MSLSP-DGSYLLTNGMDCKLCIWD 254
P + S ++T G D ++ +WD
Sbjct: 555 ALWHPHETSKVITCGWDGQIKLWD 578
Score = 42 (19.8 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 13 ALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
AL VS P + T+ AP+ GP R+ + +P +L+G+ + F
Sbjct: 73 ALKEVSYNPT-YETM--FAPEF-GPMNPFRSQQMAAPRNMLSGYAEPAHVNDF 121
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 296 (109.3 bits), Expect = 7.9e-26, P = 7.9e-26
Identities = 82/303 (27%), Positives = 143/303 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV ++ F+P G +ASGS D + W + + +F +GH++ +L + W+ DG
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-TCQGHRHWVLSISWSPDG 168
Query: 113 SQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPPL--VVSGSDDGTA 167
++ S + + WD TGKQ+ + +A H+ ++ + P P V S S DG+
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSV 228
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD + Q +T + + +Y+ D +KVW G + TLQGH
Sbjct: 229 RVWDTTAGRCERILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 227 DMITGMSLSPDGSYLLTNGM----DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ M+LS D Y L G + + D+R + Q + L + NL++
Sbjct: 288 HWVNTMALSTD--YALRTGAFEPAEASVNAQDLRG-SLQELKERALSRY------NLVR- 337
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQ 341
G + ++ +GS D +++W ++ L ++ GH +N+ +F +I S S DK
Sbjct: 338 GRGLE--RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKS 395
Query: 342 IYL 344
I L
Sbjct: 396 IKL 398
Score = 227 (85.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 73/258 (28%), Positives = 119/258 (46%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+LTGH +V +++ G ++ S S DR I +W H D L+GH + + + +TD
Sbjct: 241 ILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHWVNTMALSTD 298
Query: 112 GSQIISA-SP-DKTLRAWDVETGKQ-IKKMA-EHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ A P + ++ A D+ Q +K+ A + V RG +VSGSDD T
Sbjct: 299 YALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRG-----RGLERLVSGSDDFTL 353
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
LW + + + + I V FS S I + D +K+WD R G+ +L+GH
Sbjct: 354 FLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGH 413
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+ ++ S D L++ D L +WD++ + L GH + WS
Sbjct: 414 VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA----QKLAADLPGHADE----VYAVDWS 465
Query: 286 PDGSKVTAGSSDRMVYIW 303
PDG +V +G D+ + IW
Sbjct: 466 PDGQRVASGGKDKCLRIW 483
Score = 227 (85.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 66/278 (23%), Positives = 121/278 (43%)
Query: 53 LTGHQSAVYTMKF-----NPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDL 106
L GH + + + NP +AS S D + +W G C+ +L GH ++ L
Sbjct: 195 LAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCER--ILTGHTQSVTCL 252
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
W DG + SAS D+T++ W G + + H +VN+ S L +
Sbjct: 253 RWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST-DYALRTGAFEPAE 310
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSF--SDASDKIYTGGIDNDVKVWDLRKGEVSMT-LQ 223
A + RG++Q ++ ++ + +++ +G D + +W + + + +
Sbjct: 311 ASVNAQDLRGSLQELKER-ALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMT 369
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GHQ +I + SPD + + D + +WD R + + L GH + +
Sbjct: 370 GHQALINQVLFSPDSRIIASASFDKSIKLWDGRT----GKYLASLRGHV----AAVYQIA 421
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
WS D + +GSSD + +WD ++++ LPGH V
Sbjct: 422 WSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEV 459
Score = 208 (78.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 76/314 (24%), Positives = 130/314 (41%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S E+P GH+ V ++ ++P G +ASG + I LW + L GH I
Sbjct: 144 STETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWIT 203
Query: 105 DLHW-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
L W + + S+S D ++R WD G+ + + H V C G L+
Sbjct: 204 ALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT--CLRWGGDGLLY 261
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDN---DVKVWDLRK 215
S S D T K+W +T + + ++ S + TG + V DLR
Sbjct: 262 SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEASVNAQDLRG 320
Query: 216 G--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
E+ +++ G L L++ D L +W P A + + + GHQ
Sbjct: 321 SLQELKERALSRYNLVRGRGLER----LVSGSDDFTLFLWS--P-AEDKKPLARMTGHQA 373
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
+ L +SPD + + S D+ + +WD + + L L GH +V + + A ++
Sbjct: 374 LINQVL----FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 334 GSCSSDKQIYLGEI 347
S SSD + + ++
Sbjct: 430 VSGSSDSTLKVWDV 443
Score = 177 (67.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV-LKGHKNAILD 105
+ P+ +TGHQ+ + + F+P +IAS S D+ I LW G ++ L+GH A+
Sbjct: 362 KKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQ 419
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+ W+ D ++S S D TL+ WDV+ K + H V + S G V SG D
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQR-VASGGKDK 478
Query: 166 TAKLW 170
++W
Sbjct: 479 CLRIW 483
Score = 154 (59.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+L+GH + + ++ SP G YL + D + WD+ P C +GH+H +L
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC----QGHRHW----VL 160
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHT 318
WSPDG K+ +G + + +WD +T +++ L GH+
Sbjct: 161 SISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHS 199
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 294 (108.6 bits), Expect = 8.1e-26, P = 8.1e-26
Identities = 79/282 (28%), Positives = 130/282 (46%)
Query: 37 PNGKQ-RTSSLESPIML-----------LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
PNGKQ T+S ++ +ML GH+ V +++F+P G ++AS S DR + LW
Sbjct: 28 PNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW 87
Query: 85 HVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSF 144
+ F K H + + ++ DG + +AS DK+++ W + + + + H +
Sbjct: 88 -IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW 146
Query: 145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITA-VSFSDASDKIYTGG 203
V C L+VS S+D T K+WD + + F D V F+ + I + G
Sbjct: 147 VR-CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAG 205
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D VKVWD+R ++ Q H + +S P +YL+T D L I D+ + R
Sbjct: 206 SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLL----EGR 261
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ L+GH + +S G +G +D V +W T
Sbjct: 262 LIYTLQGHTGP----VFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 276 (102.2 bits), Expect = 9.5e-24, P = 9.5e-24
Identities = 76/305 (24%), Positives = 139/305 (45%)
Query: 44 SSLESPIM--LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
S+ E P++ GH++A+ ++ +P G +A+ S D + LW+ + + + GHK+
Sbjct: 3 SATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKD 61
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
+ + ++ G+ + SAS D+T+R W + + + H + V S S G + +
Sbjct: 62 VVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ-FLATA 120
Query: 162 SDDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
S+D + K+W M RQR + + + FS I + D +K+WD +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNL 279
+ +P G+ + + G D + +WD+R N K+L+ +Q H+ N
Sbjct: 181 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV----N---KLLQHYQVHSGGVNC 233
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
+ + P + + SSD + I D R++Y L GHTG V F + S +D
Sbjct: 234 IS--FHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Query: 340 KQIYL 344
Q+ L
Sbjct: 292 TQVLL 296
Score = 172 (65.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 53/210 (25%), Positives = 95/210 (45%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG-AIQTFPDKYQITAVSFSDASDKI 199
H + + S S G L + S D LW+ + A + K +T+V FS + +
Sbjct: 17 HKAAITSLDLSPNGKQLATA-SWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 200 YTGGIDNDVKVW-DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+ D V++W ++G+ S + H + + S DG +L T D + +W M Y
Sbjct: 76 ASASRDRTVRLWIPDKRGKFS-EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM--Y 132
Query: 259 APQNRCVKILEGHQHNFEKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH 317
+ R + L H H ++C +SPDG + + S D+ + IWDTT+++ +
Sbjct: 133 --RQRFLYSLYRHTH-----WVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 318 TGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
G N F+ + I S SD+ + + ++
Sbjct: 186 VGFANFVDFNPSGTCIASAGSDQTVKVWDV 215
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 95/323 (29%), Positives = 140/323 (43%)
Query: 28 PYSAPQAPG-PNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV 86
P PQAP P RT + Q AV ++FN G + + D+ + LW V
Sbjct: 4 PQPRPQAPQLPQHLWRTVDCQ---------QGAVRAVRFNADGNYLLTCGSDKSLKLWSV 54
Query: 87 HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN 146
GH +LD + D SQ+ S S DKT+ WDV +G+ +K+ H VN
Sbjct: 55 SRGTL-LKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVN 113
Query: 147 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA--IQTFPDKYQITAVSFSDASDKIYTGGI 204
C +++SGS DGT + WD R R IQ D+ Q S + ++ TG +
Sbjct: 114 -CVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQIL-DESQDGISSLKVSEHELLTGSV 171
Query: 205 DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC 264
D V+ +DLR G++ + G IT + S DG L++ +D + + D
Sbjct: 172 DGRVRRYDLRMGQLQVDYIGSP--ITCVCFSRDGQCTLSSSLDSTVRLLDKST----GEM 225
Query: 265 VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNES 324
+ GH + K L C + + V + S D VY WD + KLP V
Sbjct: 226 LGEYSGHVNKGYK--LDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSL 283
Query: 325 VFHATEP-VIGSCSSDKQIYLGE 346
FH TEP ++ S Q++ E
Sbjct: 284 SFHPTEPRLLTSMEGRVQVWGAE 306
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 298 (110.0 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 83/291 (28%), Positives = 144/291 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH V+ M P ++ SG DR++ +W++ ++ +L+GH + + L + D
Sbjct: 288 LEGHVMGVWAMV--PWDNILVSGGCDREVRVWNM-ATGESIYLLRGHTSTVRCLKMS-DK 343
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+ IS S D TLR WD+ TG + H + V C + G +VVSGS D TA++W +
Sbjct: 344 NTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVR--CLAVHGD-IVVSGSYDTTARVWSI 400
Query: 173 RQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
+ ++ + QI A++F +I TG +D V++WD G+ LQGH ++
Sbjct: 401 SEGRFLRALSGHFSQIYAIAFDGR--RIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQ 458
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
+ +S G L+T G D + +W + AP +R L H ++ L+ D +++
Sbjct: 459 LQMS--GDTLVTGGSDGSVRVWSLTRMAPIHR----LAAHDNSVTS--LQF----DNNRI 506
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+G SD V +W + ++L +L + +V F + VI S S + +
Sbjct: 507 VSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTV 557
Score = 223 (83.6 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 68/261 (26%), Positives = 119/261 (45%)
Query: 2 EVVTHQRENENALSTVSARPME-WSTVPYSAPQAPGPNGKQ-RTSSLES--PIMLLTGHQ 57
++ + EN T+ M W+ VP+ G ++ R ++ + I LL GH
Sbjct: 274 KIHVYDTNGENQ-KTLEGHVMGVWAMVPWDNILVSGGCDREVRVWNMATGESIYLLRGHT 332
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQII 116
S V +K + T I SGS D + +W + G C++ VL GH+ ++ L G ++
Sbjct: 333 STVRCLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRS--VLVGHQASVRCL--AVHGDIVV 387
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC-PSRRGPPLVVSGSDDGTAKLWDMRQR 175
S S D T R W + G+ ++ ++ H S + + RR + +GS D + ++WD
Sbjct: 388 SGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRR----IATGSLDTSVRIWDPNT- 442
Query: 176 GAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLS 235
G + + D + TGG D V+VW L + L H + +T SL
Sbjct: 443 GQCHAILQGHTSLVGQLQMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVT--SLQ 500
Query: 236 PDGSYLLTNGMDCKLCIWDMR 256
D + +++ G D ++ +W +R
Sbjct: 501 FDNNRIVSGGSDGRVKVWCLR 521
Score = 153 (58.9 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 53/230 (23%), Positives = 96/230 (41%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
I+++ + + +D G+ K + H V + P ++VSG D ++W+M
Sbjct: 266 IVASLDNAKIHVYDTN-GENQKTLEGHVMGVWAMVPWDN---ILVSGGCDREVRVWNMAT 321
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+I + + SD + I +G D +++WDLR G L GHQ +
Sbjct: 322 GESIYLLRGHTSTVRCLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRSVLVGHQASVR--C 378
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
L+ G +++ D +W + + R ++ L GH F + + + DG ++
Sbjct: 379 LAVHGDIVVSGSYDTTARVWSIS----EGRFLRALSGH---FSQ-IYAIAF--DGRRIAT 428
Query: 294 GSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
GS D V IWD + + L GHT V + V G +++
Sbjct: 429 GSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGDTLVTGGSDGSVRVW 478
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 291 (107.5 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 78/284 (27%), Positives = 133/284 (46%)
Query: 37 PNGKQ-RTSSLESPIML-----------LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
P+GKQ T+S ++ +ML GH+ V +++F+P G ++AS S DR + LW
Sbjct: 28 PSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLW 87
Query: 85 --HVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
G F K H + + ++ DG + +AS DK+++ W++ + + + H
Sbjct: 88 IPDKRGKSSEF---KAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHT 144
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITA-VSFSDASDKIYT 201
+V C L+VS S+D T K+WD + + F D V F+ I +
Sbjct: 145 HWVR-CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIAS 203
Query: 202 GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ 261
G D+ VK+WD+R ++ Q H + +S P G+Y++T D L I D+ +
Sbjct: 204 AGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLL----E 259
Query: 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
R + L+GH + +S G ++G +D V +W T
Sbjct: 260 GRLIYTLQGHTGP----VFTVSFSKGGELFSSGGADTQVLLWRT 299
Score = 289 (106.8 bits), Expect = 4.5e-25, P = 4.5e-25
Identities = 79/302 (26%), Positives = 142/302 (47%)
Query: 47 ESPIM--LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
E P++ GH++A+ ++ F+P+G +A+ S D + LW+ + F + GHK+ +
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV-GHKDVVT 64
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
+ ++ G+ + SAS D+T+R W + + + H + V S S G + + S+D
Sbjct: 65 SVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ-FLATASED 123
Query: 165 GTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
+ K+W+M RQR + + + FS I + D +K+WD +
Sbjct: 124 KSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HNFEKNLLKC 282
+ +P+G+ + + G D + IWD+R N K+L+ +Q H+ N +
Sbjct: 184 DSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRV----N---KLLQHYQVHSGGVNCVS- 235
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ P G+ + SSD + I D R++Y L GHTG V F + S +D Q+
Sbjct: 236 -FHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQV 294
Query: 343 YL 344
L
Sbjct: 295 LL 296
Score = 177 (67.4 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKI 199
H + + S S G L + S D LW+ + Q A + K +T+V FS + +
Sbjct: 17 HKAAITSVDFSPSGKQLATA-SWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 200 YTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYA 259
+ D V++W K S + H + + S DG +L T D + +W+M Y
Sbjct: 76 ASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM--Y- 132
Query: 260 PQNRCVKILEGHQHNFEKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHT 318
+ R + L H H ++C +SPDG + + S D+ + IWDTT+++ +
Sbjct: 133 -RQRFLYSLYRHTH-----WVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
Query: 319 GSVNESVFHATEPVIGSCSSDKQIYLGEI 347
G N F+ I S SD + + +I
Sbjct: 187 GFANFVDFNPNGTCIASAGSDHTVKIWDI 215
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 293 (108.2 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 76/254 (29%), Positives = 129/254 (50%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH+ A+L + ++ D + SAS D+T++ WD ETG + H+ V S S
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSR 351
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDL 213
L+ S SD T K+WD G++Q + ++ + +V FS S + + D+ VK+WD
Sbjct: 352 -LLASASDS-TVKIWDTGT-GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 408
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
G + TL+GH+D + + S D L + D + IWD + Q+ LEGH+
Sbjct: 409 GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT----LEGHR- 463
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ ++++ +S D + + S DR V IWDT + L GH+ V F ++
Sbjct: 464 DWVRSVI---FSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLL 520
Query: 334 GSCSSDKQIYLGEI 347
S S+D+ + + +I
Sbjct: 521 ASASNDQTVRIWDI 534
Score = 291 (107.5 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 75/267 (28%), Positives = 135/267 (50%)
Query: 48 SP-IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
SP + L GH++AV ++ ++ ++AS S DR + +W G ++ L+GH + +
Sbjct: 286 SPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQH--TLEGHSDLVRS 343
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+ ++ D S++++++ D T++ WD TG + H +V S S L+ S SDD
Sbjct: 344 VIFSHD-SRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDS 401
Query: 166 TAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
T K+WD G++Q + ++ + +V FS S + + D+ VK+WD G + TL+
Sbjct: 402 TVKIWDTGT-GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE 460
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH+D + + S D L + D + IWD + ++ LEGH +
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHT----LEGHS----SLVTSVS 512
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRI 310
+S D + + S+D+ V IWD +R +
Sbjct: 513 FSHDSRLLASASNDQTVRIWDIEARSL 539
Score = 249 (92.7 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 63/213 (29%), Positives = 106/213 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V ++ F+ ++AS S D + +W G ++ L+GH++ + + ++ D
Sbjct: 334 LEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQH--TLEGHRDWVRSVIFSHD 390
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+ SAS D T++ WD TG + H +V S S L+ S SDD T K+WD
Sbjct: 391 SQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWD 449
Query: 172 MRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
G++Q + ++ + +V FS S + + D V++WD KG TL+GH ++
Sbjct: 450 TGT-GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLV 508
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
T +S S D L + D + IWD+ + Q+
Sbjct: 509 TSVSFSHDSRLLASASNDQTVRIWDIEARSLQH 541
Score = 189 (71.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 48/171 (28%), Positives = 82/171 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH+ V ++ F+ ++AS S D + +W G ++ L+GH++ + + ++ D
Sbjct: 375 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH--TLEGHRDWVRSVIFSHD 432
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+ SAS D T++ WD TG + H +V S S L+ S SDD T ++WD
Sbjct: 433 SQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSR-LLASASDDRTVRIWD 491
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
+ T +T+VSFS S + + D V++WD+ + T
Sbjct: 492 TEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHT 542
Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH+ V ++ F+ ++AS S D + +W G ++ L+GH++ + + ++ D
Sbjct: 417 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH--TLEGHRDWVRSVIFSHD 474
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+ SAS D+T+R WD E G + H+S V S S L+ S S+D T ++WD
Sbjct: 475 SRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSR-LLASASNDQTVRIWD 533
Query: 172 MRQRGAIQTFPDKYQITAVSFSDAS 196
+ R TF I A+ F A+
Sbjct: 534 IEARSLQHTFDLDATIEAMRFDKAT 558
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 82/295 (27%), Positives = 134/295 (45%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L GH+ AV +FN G + DR I LW+ H K H + D+H T+D
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGIL-IKTYKSHGREVRDVHVTSD 71
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
++ S D+ + WDV TG+ I+K H+ VN+ +VVS D + ++WD
Sbjct: 72 NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAV-KFNDSSSVVVSAGFDRSLRVWD 130
Query: 172 MRQRGA--IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGHQDM 228
R +Q D + T +S +I G +D V+ +D+R G E+S L G
Sbjct: 131 CRSHSVEPVQII-DTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNL-GQP-- 186
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH-QHNFEKNLLKCGWSPD 287
+ +S+S DG+ +L +D L + D +++ +GH +F+ + C +
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTT----GELLQVYKGHISKSFKTD---CCLTNS 239
Query: 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ V GS D +V+ WD ++L K H V +H E + + S D I
Sbjct: 240 DAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTI 294
Score = 170 (64.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 57/228 (25%), Positives = 93/228 (40%)
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
K +LKGH+ A+L + DG+ ++ D+T+R W+ G IK H V
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHV 68
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVK 209
+ G D WD+ I+ F ++ AV F+D+S + + G D ++
Sbjct: 69 TSDNAKFCSCGGDR-QVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
VWD R V + T MS+ + ++ +D + +DMR I
Sbjct: 128 VWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMR----------IGR 177
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH 317
N + + S DG+ V AG D + + D T+ +L GH
Sbjct: 178 EMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
Score = 158 (60.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 46/203 (22%), Positives = 89/203 (43%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGS 113
GH V +KFN + +V+ S DR + +W + ++ + ++ + T +
Sbjct: 100 GHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTK--T 157
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
+II S D T+R +D+ G++ M+++ +C V++G D T +L D
Sbjct: 158 EIIGGSVDGTVRTFDMRIGRE---MSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRT 214
Query: 174 QRGAIQTFP---DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+Q + K T +++ + G D V WDL +V + H ++T
Sbjct: 215 TGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVT 274
Query: 231 GMSLSPDGSYLLTNGMDCKLCIW 253
+S P +LT+ +D + +W
Sbjct: 275 SVSYHPKEDCMLTSSVDGTIRVW 297
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 270 (100.1 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 82/304 (26%), Positives = 140/304 (46%)
Query: 50 IMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I + +GH V ++ P +G ++ S S D I LW V+GD + GH A+ D+ +
Sbjct: 281 IHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICF 340
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDG 165
T G+Q +SA+ D+ L+ WD ETG+ I + N V C P L V+G D
Sbjct: 341 NTAGTQFLSAAYDRYLKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDK 398
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTL 222
WD+R +Q + D++ + + F D + + + D ++VW+ +
Sbjct: 399 KIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ + ++LSP+G +L MD ++ I+ + N+ KI +GH +
Sbjct: 458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQV 514
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDK 340
+SPD S V +G + + IWD + ++ + H +V+H T VI +C D
Sbjct: 515 DFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVI-TCGWDG 573
Query: 341 QIYL 344
I L
Sbjct: 574 LIKL 577
Score = 42 (19.8 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 31 APQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
AP+ GP RT + +P +L+G+ + F
Sbjct: 90 APEF-GPENPFRTQQMAAPRNMLSGYAEPAHINDF 123
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 270 (100.1 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 82/304 (26%), Positives = 140/304 (46%)
Query: 50 IMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I + +GH V ++ P +G ++ S S D I LW V+GD + GH A+ D+ +
Sbjct: 281 IHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICF 340
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDG 165
T G+Q +SA+ D+ L+ WD ETG+ I + N V C P L V+G D
Sbjct: 341 NTAGTQFLSAAYDRYLKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDK 398
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTL 222
WD+R +Q + D++ + + F D + + + D ++VW+ +
Sbjct: 399 KIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ + ++LSP+G +L MD ++ I+ + N+ KI +GH +
Sbjct: 458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQV 514
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDK 340
+SPD S V +G + + IWD + ++ + H +V+H T VI +C D
Sbjct: 515 DFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVI-TCGWDG 573
Query: 341 QIYL 344
I L
Sbjct: 574 LIKL 577
Score = 42 (19.8 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 31 APQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
AP+ GP RT + +P +L+G+ + F
Sbjct: 90 APEF-GPENPFRTQQMAAPRNMLSGYAEPAHINDF 123
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 270 (100.1 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 82/304 (26%), Positives = 140/304 (46%)
Query: 50 IMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I + +GH V ++ P +G ++ S S D I LW V+GD + GH A+ D+ +
Sbjct: 281 IHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICF 340
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDG 165
T G+Q +SA+ D+ L+ WD ETG+ I + N V C P L V+G D
Sbjct: 341 NTAGTQFLSAAYDRYLKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDK 398
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTL 222
WD+R +Q + D++ + + F D + + + D ++VW+ +
Sbjct: 399 KIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ + ++LSP+G +L MD ++ I+ + N+ KI +GH +
Sbjct: 458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQV 514
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDK 340
+SPD S V +G + + IWD + ++ + H +V+H T VI +C D
Sbjct: 515 DFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVI-TCGWDG 573
Query: 341 QIYL 344
I L
Sbjct: 574 LIKL 577
Score = 42 (19.8 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 31 APQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
AP+ GP RT + +P +L+G+ + F
Sbjct: 90 APEF-GPENPFRTQQMAAPRNMLSGYAEPAHINDF 123
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 289 (106.8 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 72/283 (25%), Positives = 129/283 (45%)
Query: 54 TGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
+GH + ++++ P ++ SGS D + LW V+G+ + GH+ AI D+ W G
Sbjct: 282 SGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNRG 341
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNS-FVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+ +SAS D+ ++ WD ETG + + F P L V+G+ D WD
Sbjct: 342 TNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTSDKKIICWD 401
Query: 172 MRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM- 228
R +Q + D++ ++ ++F D + + T D +++W+ V M M
Sbjct: 402 TRSGDIVQEY-DRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDI-PVDMKYIADPTMH 459
Query: 229 -ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ ++L+P+G ++ +D K+ I+ NR K GH + +SPD
Sbjct: 460 SMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNR-KKTFTGHM--VSGYACQLDFSPD 516
Query: 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATE 330
S + +G D YIWD + ++ K H G +++H E
Sbjct: 517 MSYLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHE 559
Score = 164 (62.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 64/270 (23%), Positives = 115/270 (42%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
I +GH+ A+ + +N GT S S+DR I LW GD + + + H
Sbjct: 322 IRTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCV-KFHP 380
Query: 109 TTDGSQI-ISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDD 164
+ ++ + DK + WD +G +++ H V++ +RR V+ SDD
Sbjct: 381 DNSKQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGSVSTITFVDDNRR----FVTTSDD 436
Query: 165 GTAKLW--DMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD-LRKGEVSM- 220
+ ++W D+ P + + AV+ + + +DN + ++ L + +++
Sbjct: 437 KSMRIWEWDIPVDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRK 496
Query: 221 -TLQGHQDMITG----MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
T GH M++G + SPD SYL++ D K IWD + + K + H
Sbjct: 497 KTFTGH--MVSGYACQLDFSPDMSYLVSGDGDGKCYIWDWKT----TKMYKKWQAH---- 546
Query: 276 EKNLLKCGWSP-DGSKVTAGSSDRMVYIWD 304
+ + W P + SKV D + WD
Sbjct: 547 DGVCISALWHPHEASKVVTAGWDGQIKYWD 576
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 270 (100.1 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 82/304 (26%), Positives = 140/304 (46%)
Query: 50 IMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I + +GH V ++ P +G ++ S S D I LW V+GD + GH A+ D+ +
Sbjct: 365 IHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICF 424
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDG 165
T G+Q +SA+ D+ L+ WD ETG+ I + N V C P L V+G D
Sbjct: 425 NTAGTQFLSAAYDRYLKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDK 482
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTL 222
WD+R +Q + D++ + + F D + + + D ++VW+ +
Sbjct: 483 KIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 541
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ + ++LSP+G +L MD ++ I+ + N+ KI +GH +
Sbjct: 542 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQV 598
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDK 340
+SPD S V +G + + IWD + ++ + H +V+H T VI +C D
Sbjct: 599 DFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVI-TCGWDG 657
Query: 341 QIYL 344
I L
Sbjct: 658 LIKL 661
Score = 42 (19.8 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 31 APQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
AP+ GP RT + +P +L+G+ + F
Sbjct: 174 APEF-GPENPFRTQQMAAPRNMLSGYAEPAHINDF 207
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 76/271 (28%), Positives = 131/271 (48%)
Query: 53 LTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHG-DC----KNFMVLKGHKNAILDL 106
L GH V ++ +P I S S D+ + +W + D K LKGH + + D+
Sbjct: 17 LVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDV 76
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+ DG +S S D TLR WD+ G + H V S S ++SGS D T
Sbjct: 77 VISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQ-IISGSRDAT 135
Query: 167 AKLWD-MRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
K+W+ + + P+ +Q ++ + FS + I +G DN VK+WD++ + + TL
Sbjct: 136 IKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLT 195
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H + +++SPDGS + G D C+W++ P + LE N L
Sbjct: 196 DHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYK----LEARN---TINAL--A 246
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ ++A + D+++ IWD ++++L ++
Sbjct: 247 FSPNKYWLSAATDDKII-IWDLLTKQVLAEI 276
Score = 241 (89.9 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 70/268 (26%), Positives = 119/268 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH V + + G SGS D + LW + + KGH ++ + +++D
Sbjct: 66 LKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVST-RLFKGHTQDVMSVAFSSDN 124
Query: 113 SQIISASPDKTLRAWDV--ETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
QIIS S D T++ W+ E ++ H +V SC P +VSGS D K+W
Sbjct: 125 RQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWV-SCIRFSPNTPTIVSGSWDNKVKIW 183
Query: 171 DMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D++ T D + V+ S +GG D +W+L G+ L+ ++ I
Sbjct: 184 DIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEA-RNTI 242
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN---------LL 280
++ SP+ Y L+ D K+ IWD+ V ++ + +K L
Sbjct: 243 NALAFSPN-KYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPACL 301
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSR 308
WS DGS + AG +D ++ ++ ++S+
Sbjct: 302 SLAWSADGSVLYAGYNDGLIRVYKSSSQ 329
Score = 192 (72.6 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 52/199 (26%), Positives = 88/199 (44%)
Query: 134 QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK--------- 184
++ + HN FV S S P ++S S D T +W + A T P K
Sbjct: 13 EVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDA--TSPGKAHRSLKGHS 70
Query: 185 YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTN 244
+ + V S +G DN +++WD+ KG + +GH + ++ S D +++
Sbjct: 71 HFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISG 130
Query: 245 GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIW 303
D + +W+ C LEG + + ++ + C +SP+ + +GS D V IW
Sbjct: 131 SRDATIKVWNTL-----GECKFTLEGPEAH--QDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
Query: 304 DTTSRRILYKLPGHTGSVN 322
D S + + L HTG VN
Sbjct: 184 DIKSFKCNHTLTDHTGYVN 202
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 47/171 (27%), Positives = 84/171 (49%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKG---HKNAILDLHW 108
L GH V ++ F+ I SGS D I +W+ G+CK L+G H++ + + +
Sbjct: 107 LFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECK--FTLEGPEAHQDWVSCIRF 164
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ + I+S S D ++ WD+++ K + +H +VN+ S G L SG D A
Sbjct: 165 SPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGS-LCASGGKDTFAC 223
Query: 169 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEV 218
LW++ + + I A++FS +K + + D+ + +WDL +V
Sbjct: 224 LWELSSGKPLYKLEARNTINALAFSP--NKYWLSAATDDKIIIWDLLTKQV 272
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 221 TLQGHQDMITGMSLSPDG-SYLLTNGMDCKLCIWDMRPY--APQNRCVKILEGHQHNFEK 277
+L GH +T +++SP+ ++++ D + +W + P + + L+GH H F +
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSH-FVQ 74
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+++ S DG +GS D + +WD T GHT V F + I S S
Sbjct: 75 DVVI---SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGS 131
Query: 338 SDKQI 342
D I
Sbjct: 132 RDATI 136
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 266 (98.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 81/304 (26%), Positives = 140/304 (46%)
Query: 50 IMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I + +GH V ++ P +G ++ S S D I LW V+G+ + GH A+ D+ +
Sbjct: 281 IHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICF 340
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDG 165
T G+Q +SA+ D+ L+ WD ETG+ I + N V C P L V+G D
Sbjct: 341 NTAGTQFLSAAYDRYLKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDK 398
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTL 222
WD+R +Q + D++ + + F D + + + D ++VW+ +
Sbjct: 399 KIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ + ++LSP+G +L MD ++ I+ + N+ KI +GH +
Sbjct: 458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQV 514
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDK 340
+SPD S V +G + + IWD + ++ + H +V+H T VI +C D
Sbjct: 515 DFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVI-TCGWDG 573
Query: 341 QIYL 344
I L
Sbjct: 574 LIKL 577
Score = 42 (19.8 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 31 APQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
AP+ GP RT + +P +L+G+ + F
Sbjct: 90 APEF-GPENPFRTQQMAAPRNMLSGYAEPAHINDF 123
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 265 (98.3 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 80/304 (26%), Positives = 141/304 (46%)
Query: 50 IMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I + +GH V ++ P +G ++ S S D I LW V+GD + GH A+ D+ +
Sbjct: 282 IHVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICF 341
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDG 165
G++ +SA+ D+ ++ WD ETG+ I + N V C P L V+G D
Sbjct: 342 NNAGTRFLSAAYDRYIKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDK 399
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTL 222
WD+R +Q + D++ + + F D + + + D ++VW+ +
Sbjct: 400 KIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 458
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ + ++LSP+G +L MD ++ I+ + N+ KI +GH +
Sbjct: 459 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQV 515
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDK 340
+SPD S V +G +D + IWD + ++ ++ H +V+H T VI +C D
Sbjct: 516 DFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKVI-TCGWDG 574
Query: 341 QIYL 344
I L
Sbjct: 575 LIKL 578
Score = 42 (19.8 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 31 APQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
AP+ GP RT + +P +L+G+ + F
Sbjct: 91 APEF-GPENPFRTQQMAAPRNMLSGYAEPAHINDF 124
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 70/236 (29%), Positives = 110/236 (46%)
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++ DG +++AS D + W ++G+ + ++A H V SCC S G L+ S S D +
Sbjct: 34 FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGR-LIASSSSDHSI 92
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
+LWD+ + + + + VSFS S ++ +GG D VW+++ G L GH
Sbjct: 93 RLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHC 152
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
D I SP L T D + IWD+R P LEGH N C +S
Sbjct: 153 DSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN-LEGHTGNIS---CLC-YSA 207
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
G + +GS D+ + +W T+ + +L GHT VN F E + S + +
Sbjct: 208 SGL-LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTV 262
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 67/248 (27%), Positives = 118/248 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH+ V + F+P G +IAS S D I LW V K VLKGH+ ++ + ++ D
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDV-ARSKCLHVLKGHQRSVETVSFSPDS 122
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
Q+ S DK W+V++G+++ + H + S S L +GS D T +WD+
Sbjct: 123 KQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLA-TGSWDSTVHIWDL 181
Query: 173 RQRGAIQTFPDKY----QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
R + ++ + I+ + +S AS + +G D + VW + + L+GH
Sbjct: 182 RASTPVVSYHNLEGHTGNISCLCYS-ASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIW 240
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ ++ SPD L + G + +WD +C++ L+G C ++PDG
Sbjct: 241 VNSLAFSPDELKLASAGYSRTVKVWDCLT----GKCLETLKGMLDVAHA----CIFTPDG 292
Query: 289 SKVTAGSS 296
+ +G++
Sbjct: 293 KLLVSGAA 300
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 77/276 (27%), Positives = 119/276 (43%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQI 115
H V F+P G + + S D +++W + L GH+ + ++ DG I
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSG-RLLWRLAGHRGPVKSCCFSPDGRLI 83
Query: 116 ISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR 175
S+S D ++R WDV K + + H V + S L SG D A +W+++
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLA-SGGWDKRAIVWEVQSG 142
Query: 176 GAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGE--VSM-TLQGHQDMITG 231
+ I + FS SD + TG D+ V +WDLR VS L+GH I+
Sbjct: 143 RRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISC 202
Query: 232 MSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+ S G LL +G D +C+W +P N L+GH N L +SPD K
Sbjct: 203 LCYSASG--LLASGSWDKTICVW--KPTT--NNLPLQLKGH--TIWVNSL--AFSPDELK 252
Query: 291 VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVF 326
+ + R V +WD + + L L G + +F
Sbjct: 253 LASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIF 288
Score = 205 (77.2 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 55/198 (27%), Positives = 90/198 (45%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L GHQ +V T+ F+P +ASG D+ +W V + +L GH ++I ++
Sbjct: 105 VLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSG-RRVHLLVGHCDSIQSSDFSPT 163
Query: 112 GSQIISASPDKTLRAWDVETGKQI---KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ + S D T+ WD+ + + H ++ C S G L+ SGS D T
Sbjct: 164 SDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG--LLASGSWDKTIC 221
Query: 169 LWDMRQRGA-IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
+W +Q + +++FS K+ + G VKVWD G+ TL+G D
Sbjct: 222 VWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLD 281
Query: 228 MITGMSLSPDGSYLLTNG 245
+ +PDG LL +G
Sbjct: 282 VAHACIFTPDGK-LLVSG 298
Score = 199 (75.1 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 41/162 (25%), Positives = 79/162 (48%)
Query: 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++ +FS + T D V VW + G + L GH+ + SPDG + ++
Sbjct: 28 EVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSS 87
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
D + +WD+ +++C+ +L+GHQ + E +SPD ++ +G D+ +W+
Sbjct: 88 SDHSIRLWDVA----RSKCLHVLKGHQRSVET----VSFSPDSKQLASGGWDKRAIVWEV 139
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
S R ++ L GH S+ S F T + + S D +++ ++
Sbjct: 140 QSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Score = 133 (51.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
QH+ E N +SPDG + S D VY+W T S R+L++L GH G V F
Sbjct: 24 QHHGEVNC--SAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGR 81
Query: 332 VIGSCSSDKQIYLGEI 347
+I S SSD I L ++
Sbjct: 82 LIASSSSDHSIRLWDV 97
Score = 130 (50.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 38/156 (24%), Positives = 64/156 (41%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCK--NFMVLKGHKNAILDLH 107
+ LL GH ++ + F+P +A+GS D + +W + ++ L+GH I L
Sbjct: 145 VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLC 204
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++ G + S S DKT+ W T ++ H +VNS S L +G T
Sbjct: 205 YSASGL-LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSR-TV 262
Query: 168 KLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGG 203
K+WD ++T + K+ G
Sbjct: 263 KVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSG 298
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 89/302 (29%), Positives = 131/302 (43%)
Query: 37 PNGKQRTSSLESPIM-LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFM 94
P K R L M L Q AV ++FN G + D+ + LW+ + G
Sbjct: 4 PEPKPRAPELPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LR 61
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
GH +LD + D S + S DKT+ WDV TG+ ++K H VN+ +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 155 PPLVVSGSDDGTAKLWDMRQRGA--IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVW 211
+++SGS D + + WD R R +QT + I++V SD +I G +D V+ +
Sbjct: 122 T-VILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSD--HEILAGSVDGRVRRY 178
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
DLR G+VS G IT S DG L + +D L + D V GH
Sbjct: 179 DLRMGQVSSDYVGSP--ITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYV----GH 232
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
++ K L C S + V + S D V+ WD + LP + V +H TEP
Sbjct: 233 KNQQYK--LDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPTEP 290
Query: 332 VI 333
+
Sbjct: 291 CL 292
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL Q + + + DG+Y LT G D L +W+ P + ++ GH +E +L
Sbjct: 20 TLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWN--PL--RGTLLRTYSGH--GYE--VL 71
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
S D S + +G D+ V +WD + +++ K GH G VN F+ VI S S D
Sbjct: 72 DAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 341 QI 342
+
Sbjct: 132 SV 133
Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 52/213 (24%), Positives = 90/213 (42%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-----FMVLKGHKNAILDLHWT 109
GH V T++FN TVI SGS D + W DC++ L ++ I +
Sbjct: 107 GHAGKVNTVQFNEEATVILSGSIDSSVRCW----DCRSRKPEPVQTLDEARDGISSVK-V 161
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+D +I++ S D +R +D+ G+ S + C SR G ++S S D T +L
Sbjct: 162 SD-HEILAGSVDGRVRRYDLRMGQVSSDYV--GSPITCTCFSRDGQCTLIS-SLDSTLRL 217
Query: 170 WDMRQRGAIQTFP----DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
D + + +Y++ S+ + + D V WDL +G +++ L
Sbjct: 218 LDKDTGELLGEYVGHKNQQYKLDCC-LSERDTHVVSCSEDGKVFFWDLVEGALALALPVG 276
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+++ ++ P LLT M + W Y
Sbjct: 277 SNVVQSLAYHPTEPCLLT-AMGGSIQYWREETY 308
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 281 (104.0 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 84/341 (24%), Positives = 149/341 (43%)
Query: 2 EVVTHQRENENALSTVSARPMEWSTVPYS-APQAPGPN-----GKQRTSSLESPIMLLTG 55
EV TH+ + E L R ++ Y P G N G+Q + I G
Sbjct: 207 EVETHRSKEETILH--KDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKG 264
Query: 56 HQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
H + ++F P +G ++ SGS D I +W V+ D +GH I DL ++ DG
Sbjct: 265 HTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRS 324
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL---VVSGSDDGTAKLWD 171
+S S DKT++ WD E GK + ++ + +C + P ++G+ D +D
Sbjct: 325 FLSTSFDKTIKLWDTELGKCLNCF--NSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFD 382
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGHQDMI 229
+R +Q + I +++F + + T D+ ++ W+ + +
Sbjct: 383 IRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSM 442
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289
++L P+G + +D + ++ QN+ K+ +G+ + L+ G+SPDG
Sbjct: 443 PRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNK-KKVFKGYSCSGYS--LEVGFSPDGR 499
Query: 290 KVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATE 330
V +G S WD + +++ KLP H+G V FH E
Sbjct: 500 FVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQE 540
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 274 (101.5 bits), Expect = 7.8e-24, P = 7.8e-24
Identities = 89/337 (26%), Positives = 152/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW-HVHGDC 90
GP G++R + P L+GH+S V + F+P +VI S S D I +W H GD
Sbjct: 83 GPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPD--------------------GSYLLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ G +LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L P G + + + D+ + IWD ++R
Sbjct: 320 IKMWDVSI----GMCLMTLVGHD-NWVRGVLV---HPGGKYIVSCADDKTLRIWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
L H V FH T P + + S D+ + + E
Sbjct: 372 CTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 42/113 (37%), Positives = 57/113 (50%)
Query: 62 TMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASP 120
T K G + SGS D+ I +W V G C M L GH N + + G I+S +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSIGMC--LMTLVGHDNWVRGVLVHPGGKYIVSCAD 358
Query: 121 DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
DKTLR WD + + K ++ H FV S + P VV+GS D T K+W+ R
Sbjct: 359 DKTLRIWDYKNKRCTKTLSAHEHFVTSL-DFHKTAPYVVTGSVDQTVKVWECR 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V I + D +++WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNW-VRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ + TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 276 (102.2 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 81/300 (27%), Positives = 142/300 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
+ GH V + +F+P G +ASGS D+ + +W + + K HK+ +L + W+ D
Sbjct: 101 IPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELP-LHTCKSHKSWVLCIAWSPDA 159
Query: 113 SQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPP--LVVSGSDDGTA 167
++I SA + + W+ +TG+QI K + H ++ S P + P L+ S DG
Sbjct: 160 TKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNI 219
Query: 168 KLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
+WD Q ++ +T + + IY+G D VK+W G + + GH
Sbjct: 220 FIWDTVQGTVVRCLSGHTASVTCLRWG-GEGLIYSGSQDRTVKMWRADDGVMCRNMTGHA 278
Query: 227 DMITGMSLSPDGSYLLTNGMD-CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
I ++L+ D + L T+ + K CI +P + C K+ Q +E L G
Sbjct: 279 HWINTLALNTDYA-LRTSCFEPSKRCI---KPDTVEE-CQKVA---QTRYEAALEIAG-- 328
Query: 286 PDGSKVTAGSSDRMVYIWDTT-SRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G ++ +GS D +++W+ +++ + ++ GH VN+ VF I S S DK + L
Sbjct: 329 --GERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKL 386
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 68/259 (26%), Positives = 121/259 (46%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD--CKNFMVLKGHKNAILDLH 107
+ L+GH ++V +++ G +I SGS DR + +W C+N + GH + I L
Sbjct: 230 VRCLSGHTASVTCLRWGGEG-LIYSGSQDRTVKMWRADDGVMCRN---MTGHAHWINTLA 285
Query: 108 WTTDGSQIISA-SPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
TD + S P K R +T ++ +K+A+ G +VSGSDD T
Sbjct: 286 LNTDYALRTSCFEPSK--RCIKPDTVEECQKVAQTRY---EAALEIAGGERLVSGSDDFT 340
Query: 167 AKLWDMRQ-RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG 224
+W+ ++ + +I Q + V FS + I + D VK+W R G+ +L+G
Sbjct: 341 LFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRG 400
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
H + ++ S D L++ D L +++++ + L GH + W
Sbjct: 401 HVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKS----LYYDLPGHGDE----VFTVDW 452
Query: 285 SPDGSKVTAGSSDRMVYIW 303
SP+G+KV +G D+++ +W
Sbjct: 453 SPEGTKVVSGGKDKVLKLW 471
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 58/261 (22%), Positives = 115/261 (44%)
Query: 63 MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD 121
M +P ++AS D +IF+W V G L GH ++ L W +G I S S D
Sbjct: 201 MHKDPTCRLLASCGKDGNIFIWDTVQGTVVR--CLSGHTASVTCLRWGGEGL-IYSGSQD 257
Query: 122 KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF 181
+T++ W + G + M H ++N+ + L S + + +
Sbjct: 258 RTVKMWRADDGVMCRNMTGHAHWINTLALNT-DYALRTSCFEPSKRCIKPDTVEECQKVA 316
Query: 182 PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT-LQGHQDMITGMSLSPDGSY 240
+Y+ A+ + +++ +G D + +W+ ++ + S+ + GH ++ + SPD Y
Sbjct: 317 QTRYE-AALEIA-GGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRY 374
Query: 241 LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMV 300
+ + D + +W R + + L GH + + WS D + +GS+D +
Sbjct: 375 IASASFDKSVKLWCGRT----GKYLASLRGHVGP----VYQVAWSADSRLLVSGSADSTL 426
Query: 301 YIWDTTSRRILYKLPGHTGSV 321
+++ ++ + Y LPGH V
Sbjct: 427 KVFELKTKSLYYDLPGHGDEV 447
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 78/319 (24%), Positives = 130/319 (40%)
Query: 46 LESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILD 105
LE P+ H+S V + ++P T IAS + +I +W+ + LK HK I
Sbjct: 136 LELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITS 195
Query: 106 LHWTT---DGS--QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS 160
L W D + + S D + WD G ++ ++ H + V C G L+ S
Sbjct: 196 LAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVT--CLRWGGEGLIYS 253
Query: 161 GSDDGTAKLW--D-----MRQRGA---IQTFP--DKYQITAVSFSDASDKIYTGGIDNDV 208
GS D T K+W D G I T Y + F + I ++
Sbjct: 254 GSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRCIKPDTVEECQ 313
Query: 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268
KV R E ++ + G + +++G S D + + N + K I NR +
Sbjct: 314 KVAQTRY-EAALEIAGGERLVSG---SDDFTLFMWNPKETKQSI---------NR----M 356
Query: 269 EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA 328
GH + + +SPD + + S D+ V +W + + L L GH G V + + A
Sbjct: 357 TGHMQLVNQVV----FSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSA 412
Query: 329 TEPVIGSCSSDKQIYLGEI 347
++ S S+D + + E+
Sbjct: 413 DSRLLVSGSADSTLKVFEL 431
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 278 (102.9 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 77/311 (24%), Positives = 154/311 (49%)
Query: 39 GKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFM--VL 96
GK + S + I L H V+ ++F+ G +AS S D+ +W + D + L
Sbjct: 258 GKHQIPSQTAQI--LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTL 315
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRG 154
GH ++ + W+ D Q+++ ++ +R WDV++G + + SC P +G
Sbjct: 316 VGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQG 375
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL 213
+++G D + +WD+ R + Q ++ ++ +D + + D+ + ++D
Sbjct: 376 ---IIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD- 431
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
R+ V ++ +DMIT SLS D Y+L N ++ ++ +W++ P + V +GH+
Sbjct: 432 REATVERLIE-EEDMITSFSLSNDNKYILVNLLNQEIRLWNIEG-DP--KIVSRYKGHKR 487
Query: 274 NFEKNLLK-CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATE-P 331
+ + +++ C + + +GS D VYIW ++ +++ +LPGH G+VN + T
Sbjct: 488 S--RFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLH 545
Query: 332 VIGSCSSDKQI 342
++ S S D I
Sbjct: 546 MLASASDDGTI 556
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/215 (23%), Positives = 92/215 (42%)
Query: 67 PAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA-ILDLHWTTDGSQIISASPDKTLR 125
P G I +G DR I +W + G K KG + + D+ T DG ++S D +
Sbjct: 371 PDGQGIIAGMTDRSICMWDLDGREKECW--KGQRTQKVSDIAMTDDGKWLVSVCKDSVIS 428
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY 185
+D E ++++ E + S S ++V+ + +LW++ I + +
Sbjct: 429 LFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQ-EIRLWNIEGDPKIVSRYKGH 485
Query: 186 Q----ITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSY 240
+ I F I +G D+ V +W G++ + L GH + +S SP +
Sbjct: 486 KRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLH 545
Query: 241 LLTNGMDC-KLCIWDMRPYAPQNRCVKILEGHQHN 274
+L + D + IW + QN+ K+++G N
Sbjct: 546 MLASASDDGTIRIWGLDRINQQNQKKKLVQGSSSN 580
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 273 (101.2 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 83/287 (28%), Positives = 136/287 (47%)
Query: 39 GKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKG 98
GKQ S+L+ +TG + + NP +AS S D I +W CKN M L G
Sbjct: 214 GKQLGSTLKGHTKFITGLSWEPFHL--NPKCVRLASSSKDSTIRIWDTES-CKNLMSLSG 270
Query: 99 HKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLV 158
H ++ L W +G I S S D+T+R ++ G+ ++ + H +VN+ + ++
Sbjct: 271 HTMSVTCLKWGGEGL-IYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNT--DYVL 327
Query: 159 VSGSDDGTAKLWDM---RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
+GS D T K +D QR A++ + D + A S + + +G D V +W+
Sbjct: 328 RTGSYDHTGKEYDTLEEAQRVALERYND---VKAKS--KGMEILISGSDDFTVIMWNPSV 382
Query: 216 GEVSMT-LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274
+ S++ L GHQ +I +S SPDG Y + D + +WD + + GH
Sbjct: 383 TKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWD----GQSGKFLGNFRGHVGA 438
Query: 275 FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+ C WS D + +GS D + IWD ++++ +LPGH V
Sbjct: 439 VYQ---VC-WSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEV 481
Score = 255 (94.8 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 77/263 (29%), Positives = 127/263 (48%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA 102
T S ++ +M L+GH +V +K+ G +I SGS DR + +++ D + VL GH +
Sbjct: 259 TESCKN-LMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTT-DGRLVRVLDGHAHW 315
Query: 103 ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162
+ L TD + + S D T + +D T ++ +++A N +G +++SGS
Sbjct: 316 VNTLALNTD-YVLRTGSYDHTGKEYD--TLEEAQRVALER--YNDVKAKSKGMEILISGS 370
Query: 163 DDGTAKLWDMR-QRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
DD T +W+ + +I Q I VSFS + D +K+WD + G+
Sbjct: 371 DDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLG 430
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
+GH + + S D YL++ D L IWD++ + K L GH +
Sbjct: 431 NFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKT----KKMEKELPGHADE----VY 482
Query: 281 KCGWSPDGSKVTAGSSDRMVYIW 303
WSPDG +V +GS DR++ IW
Sbjct: 483 TVDWSPDGDRVASGSKDRLLRIW 505
Score = 230 (86.0 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 77/302 (25%), Positives = 126/302 (41%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
++GH AV F+P G S D + +W ++ LKGH N +L + W+ D
Sbjct: 136 MSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTH-TLKGHTNWVLQVAWSPDS 194
Query: 113 SQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSRRGPPLV--VSGSDDGTA 167
+I +A + +R W +TGKQ+ + H F+ P P V S S D T
Sbjct: 195 KKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTI 254
Query: 168 KLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++WD + + +T + + IY+G D V+V++ G + L GH
Sbjct: 255 RIWDTESCKNLMSLSGHTMSVTCLKWG-GEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHA 313
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH-NFEK-NLLKCGW 284
+ ++L+ D Y+L G Y + LE Q E+ N +K
Sbjct: 314 HWVNTLALNTD--YVLRTGS-----------YDHTGKEYDTLEEAQRVALERYNDVKA-- 358
Query: 285 SPDGSKVT-AGSSDRMVYIWD-TTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
G ++ +GS D V +W+ + ++ + +L GH +N F S S DK I
Sbjct: 359 KSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSI 418
Query: 343 YL 344
L
Sbjct: 419 KL 420
Score = 225 (84.3 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 76/306 (24%), Positives = 134/306 (43%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLH 107
+P L GH + V + ++P IA+ + DI +W + LKGH I L
Sbjct: 173 TPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLS 232
Query: 108 W-----TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162
W ++ S+S D T+R WD E+ K + ++ H V C G L+ SGS
Sbjct: 233 WEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVT--CLKWGGEGLIYSGS 290
Query: 163 DDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMT 221
D T ++++ G + D + + + +D + TG D+ K +D + +
Sbjct: 291 QDRTVRVFNTTD-GRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVA 349
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
L+ + D+ + S L++ D + +W+ P + + L GHQ NL+
Sbjct: 350 LERYNDV---KAKSKGMEILISGSDDFTVIMWN--PSVTKTS-ISRLTGHQQLI--NLVS 401
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQ 341
+SPDG + S D+ + +WD S + L GH G+V + + + + S S D
Sbjct: 402 --FSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDST 459
Query: 342 IYLGEI 347
+ + +I
Sbjct: 460 LKIWDI 465
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
++ GH + + + SPDG ++ G D + IWD+ P + L+GH N+ +L
Sbjct: 135 SMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHT----LKGHT-NW---VL 186
Query: 281 KCGWSPDGSKVTAGSSDRMVYIW-DTTSRRILYKLPGHTGSVNE---SVFHATEPVIGSC 336
+ WSPD K+ + + IW T +++ L GHT + FH +
Sbjct: 187 QVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLA 246
Query: 337 SSDK 340
SS K
Sbjct: 247 SSSK 250
Score = 117 (46.2 bits), Expect = 0.00058, P = 0.00058
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH AVY + ++ + SGS D + +W + K L GH + + + W+ DG +
Sbjct: 434 GHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTK-KMEKELPGHADEVYTVDWSPDGDR 492
Query: 115 IISASPDKTLRAWDV 129
+ S S D+ LR W V
Sbjct: 493 VASGSKDRLLRIWTV 507
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 270 (100.1 bits), Expect = 4.2e-23, P = 4.2e-23
Identities = 82/304 (26%), Positives = 140/304 (46%)
Query: 50 IMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I + +GH V ++ P +G ++ S S D I LW V+GD + GH A+ D+ +
Sbjct: 146 IHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICF 205
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDG 165
T G+Q +SA+ D+ L+ WD ETG+ I + N V C P L V+G D
Sbjct: 206 NTAGTQFLSAAYDRYLKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDK 263
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTL 222
WD+R +Q + D++ + + F D + + + D ++VW+ +
Sbjct: 264 KIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 322
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ + ++LSP+G +L MD ++ I+ + N+ KI +GH +
Sbjct: 323 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQV 379
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDK 340
+SPD S V +G + + IWD + ++ + H +V+H T VI +C D
Sbjct: 380 DFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVI-TCGWDG 438
Query: 341 QIYL 344
I L
Sbjct: 439 LIKL 442
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 270 (100.1 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 82/304 (26%), Positives = 140/304 (46%)
Query: 50 IMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I + +GH V ++ P +G ++ S S D I LW V+GD + GH A+ D+ +
Sbjct: 149 IHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICF 208
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDG 165
T G+Q +SA+ D+ L+ WD ETG+ I + N V C P L V+G D
Sbjct: 209 NTAGTQFLSAAYDRYLKLWDTETGQCISRFT--NRKVPYCVKFNPDEDKQNLFVAGMSDK 266
Query: 166 TAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTL 222
WD+R +Q + D++ + + F D + + + D ++VW+ +
Sbjct: 267 KIVQWDIRSGEIVQEY-DRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 325
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ + ++LSP+G +L MD ++ I+ + N+ KI +GH +
Sbjct: 326 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKGHM--VAGYACQV 382
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA--TEPVIGSCSSDK 340
+SPD S V +G + + IWD + ++ + H +V+H T VI +C D
Sbjct: 383 DFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVI-TCGWDG 441
Query: 341 QIYL 344
I L
Sbjct: 442 LIKL 445
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 274 (101.5 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 69/256 (26%), Positives = 126/256 (49%)
Query: 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS 119
V ++ F+P G +A+G D+ I +W + + + +L GH+ I L ++ DG ++S S
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDI-AQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 407
Query: 120 PDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ 179
D+T+ WDVE G+Q K + + V + S G + +GS D ++W Q
Sbjct: 408 GDRTVCLWDVEAGEQ-KLILHTDDGVTTVMFSPDGQ-FIAAGSLDKVIRIWTSSGTLVEQ 465
Query: 180 TFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL-----------RKGEV-SMTLQGHQD 227
+ + +V+FS + +G +DN +K+W+L ++G + T GH+D
Sbjct: 466 LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKD 525
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
I +++SPDG ++++ D + W P +P ++ L+GH ++ ++ SP+
Sbjct: 526 FILSVTVSPDGKWIISGSKDRTIQFWS--PDSPHSQLT--LQGHNNS----VISVAVSPN 577
Query: 288 GSKVTAGSSDRMVYIW 303
G GS D IW
Sbjct: 578 GHCFATGSGDLRARIW 593
Score = 259 (96.2 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 80/312 (25%), Positives = 136/312 (43%)
Query: 23 EWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIF 82
+W TV + P P Q +LE H S + ++F+ G +A+G + R
Sbjct: 274 DW-TVTSNVPNKEPPISVQLLHTLE--------HTSVICYVRFSADGKFLATGCN-RAAM 323
Query: 83 LWHVH-GDCKNFMVLKGHKNA----ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137
+++V G + + K + + ++ DG + + D+ +R WD+ + +
Sbjct: 324 VFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRL 383
Query: 138 MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASD 197
+ H + S S+ G LV SGS D T LWD+ +T V FS
Sbjct: 384 LTGHEQEIYSLDFSKDGKTLV-SGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQ 442
Query: 198 KIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR- 256
I G +D +++W G + L GH++ + ++ SPDG YL++ +D + +W+++
Sbjct: 443 FIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQC 501
Query: 257 -----P--YAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
P Y C + GH+ +F +L SPDG + +GS DR + W S
Sbjct: 502 VSNVAPSMYKEGGICKQTFTGHK-DF---ILSVTVSPDGKWIISGSKDRTIQFWSPDSPH 557
Query: 310 ILYKLPGHTGSV 321
L GH SV
Sbjct: 558 SQLTLQGHNNSV 569
Score = 241 (89.9 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 68/216 (31%), Positives = 107/216 (49%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTT 110
LLTGH+ +Y++ F+ G + SGS DR + LW V G+ K ++L + + + ++
Sbjct: 383 LLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQK--LILHTD-DGVTTVMFSP 439
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG I + S DK +R W +G ++++ H V S S G LV SGS D T KLW
Sbjct: 440 DGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEESVYSVAFSPDGKYLV-SGSLDNTIKLW 497
Query: 171 DMR----------QRGAI--QTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGE 217
+++ + G I QTF K I +V+ S I +G D ++ W
Sbjct: 498 ELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPH 557
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
+TLQGH + + +++SP+G T D + IW
Sbjct: 558 SQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Score = 205 (77.2 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 76/314 (24%), Positives = 134/314 (42%)
Query: 6 HQRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKF 65
H R A SA S +P P P + + + +P+++ G S +
Sbjct: 201 HVRPAVGATMAGSAMRTFPSNLPLGHPPPPSDSANSSVTPIAAPLVV-NGKVSG--NPPY 257
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKN------FMVLKG--HKNAILDLHWTTDGSQIIS 117
PA + S +R+ W V + N +L H + I + ++ DG + ++
Sbjct: 258 -PAEIIPTSNVPNREEKDWTVTSNVPNKEPPISVQLLHTLEHTSVICYVRFSADG-KFLA 315
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNS------FVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
++ ++VETGK I + E +S +V S S G L +G +D ++WD
Sbjct: 316 TGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLA-TGVEDQQIRIWD 374
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ Q+ + Q I ++ FS + +G D V +WD+ GE + L D +T
Sbjct: 375 IAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHT-DDGVT 433
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+ SPDG ++ +D + IW V+ L GH E+++ +SPDG
Sbjct: 434 TVMFSPDGQFIAAGSLDKVIRIW-----TSSGTLVEQLHGH----EESVYSVAFSPDGKY 484
Query: 291 VTAGSSDRMVYIWD 304
+ +GS D + +W+
Sbjct: 485 LVSGSLDNTIKLWE 498
Score = 192 (72.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 53/182 (29%), Positives = 88/182 (48%)
Query: 166 TAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
T KL + Q + + D Y + +V+FS + TG D +++WD+ + V L GH
Sbjct: 329 TGKLITLLQEESSKREGDLY-VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGH 387
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+ I + S DG L++ D +C+WD+ A + + + H + + +S
Sbjct: 388 EQEIYSLDFSKDGKTLVSGSGDRTVCLWDVE--AGEQKLIL------HT-DDGVTTVMFS 438
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG 345
PDG + AGS D+++ IW T+S ++ +L GH SV F + S S D I L
Sbjct: 439 PDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 497
Query: 346 EI 347
E+
Sbjct: 498 EL 499
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 267 (99.0 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 76/268 (28%), Positives = 118/268 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH AV + + AG + S S D I LW LKGH++ + + + G
Sbjct: 144 LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTG 203
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++SAS D T++ WD+ TG + HN +V S G L S S D T +W
Sbjct: 204 DFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGT-LFASASLDQTVTVWSF 262
Query: 173 RQRGA-------------IQTFPDK-Y-QITAVSFSDASDKI-YTGGIDNDVKVWDLRKG 216
+ A ++ PD Y +T S I ++G D +K W++ G
Sbjct: 263 ATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTG 322
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276
+V TL H++ + G++ P G YL++ D L +W++ RC+K +E H+H F
Sbjct: 323 DVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSA----QRCMKAIEAHEH-FV 377
Query: 277 KNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
+ SP V GS D +W+
Sbjct: 378 STVAFHQTSPF---VITGSVDMSCKVWE 402
Score = 243 (90.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 76/318 (23%), Positives = 136/318 (42%)
Query: 34 APGPNGKQRTSSLESP--IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
AP + +Q + P LTGH+ + + F+P T++AS S D I +W G
Sbjct: 81 APTRDKRQAADWIPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQL 140
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV-ETGKQIKKMAEHNSFVNSCC 149
+ LKGH +A+ D+ G Q++S S D +++ WD +T +K + H V+S
Sbjct: 141 ER--TLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVT 198
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
G V+S S D T K WD+ + TF + + S+ + +D V
Sbjct: 199 FLPTGD-FVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTV 257
Query: 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268
VW + L+ H+ + + +PD +Y G + + ++R +K
Sbjct: 258 TVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAW 317
Query: 269 EGHQHNFEKNLLKC-GW------SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+ + LL W P G + + + D+ + +W+ +++R + + H V
Sbjct: 318 NINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFV 377
Query: 322 NESVFHATEPVIGSCSSD 339
+ FH T P + + S D
Sbjct: 378 STVAFHQTSPFVITGSVD 395
Score = 237 (88.5 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 67/265 (25%), Positives = 121/265 (45%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L GH+ I + + + + S S D T++ WD ETG+ + + H VN G
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
LV S S D + KLWD Q +++ ++ +++V+F D + + D+ +K WD+
Sbjct: 162 QLV-SCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDI 220
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
G T +GH D + + +S DG+ + +D + +W +A ++ + +L H+H
Sbjct: 221 STGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWS---FATKSAKL-VLRDHEH 276
Query: 274 NFE--------KNLLKCGWSPDGSK---VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN 322
E G P+G+ + +GS DR + W+ + +L+ L H V
Sbjct: 277 AVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVR 336
Query: 323 ESVFHATEPVIGSCSSDKQIYLGEI 347
FH + S + DK + + E+
Sbjct: 337 GLAFHPKGKYLISVADDKTLRVWEL 361
Score = 168 (64.2 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 47/220 (21%), Positives = 92/220 (41%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH+ V ++ F P G + S S D I W + G C +GH + + + + D
Sbjct: 187 LKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYC--VYTFRGHNDWVRMIRISND 244
Query: 112 GSQIISASPDKTLRAWDVET--GKQIKKMAEH----------NSFVNSCC--PSRRGPPL 157
G+ SAS D+T+ W T K + + EH ++ N P +
Sbjct: 245 GTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHI 304
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ SGS D + K W++ + T + + ++F + + D ++VW+L
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQ 364
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
++ H+ ++ ++ +++T +D +W+ R
Sbjct: 365 RCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 275 (101.9 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 65/227 (28%), Positives = 108/227 (47%)
Query: 30 SAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD 89
S+ Q+ GPNG++ + LL GH VY+ F+P G + S S D I LW +
Sbjct: 398 SSDQSIGPNGRRSYT-------LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLN 450
Query: 90 CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC 149
N + KGH + D ++ G S S D+T R W ++ + ++ MA H S V+ C
Sbjct: 451 A-NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVD-CV 508
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDV 208
+ +GS D T +LWD++ ++ F + + +++ S + +G D +
Sbjct: 509 QWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTI 568
Query: 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255
+WDL L GH + +S S +GS L + DC + +WD+
Sbjct: 569 MMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 247 (92.0 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 63/233 (27%), Positives = 107/233 (45%)
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+++ +L GH + ++ G ++S+S D T+R W + + HN V
Sbjct: 409 RSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQF 468
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
S G S S D TA++W M + ++ + V + + I TG D V+
Sbjct: 469 SPFGH-YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVR 527
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
+WD++ GE GH+ M+ +++SPDG Y+ + D + +WD+ RC+ L
Sbjct: 528 LWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA----RCITPLM 583
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN 322
GH + +S +GS + +GS+D V +WD TS L K G+ N
Sbjct: 584 GHN----SCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSN 632
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 52/237 (21%), Positives = 98/237 (41%)
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
GS + A D + ++ + + H+ V S S G V+S S D T +LW
Sbjct: 388 GSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGD-FVLSSSADTTIRLWS 446
Query: 172 MRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ + + Y + FS + D ++W + + + + GH +
Sbjct: 447 TKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVD 506
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+ P+ +Y+ T D + +WD++ CV+I GH+ +L SPDG
Sbjct: 507 CVQWHPNCNYIATGSSDKTVRLWDVQT----GECVRIFIGHR----SMVLSLAMSPDGRY 558
Query: 291 VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +G D + +WD ++ R + L GH V + ++ S S+D + L ++
Sbjct: 559 MASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 85/302 (28%), Positives = 131/302 (43%)
Query: 37 PNGKQRTSSL-ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFM 94
P K R L + L Q AV ++FN G + D+ + LW+ + G
Sbjct: 4 PEPKPRAPELPRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LR 61
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
GH +LD + D S + S DKT+ WDV TG+ ++K H VN+ +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 155 PPLVVSGSDDGTAKLWDMRQRGA--IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVW 211
+++SGS D + + WD R R +QT + I++V SD +I G +D V+ +
Sbjct: 122 T-VILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSD--HEILAGSVDGRVRRY 178
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
DLR G+V+ G IT S DG L + +D L + D V GH
Sbjct: 179 DLRMGQVTSDYVGSP--ITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYV----GH 232
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
++ +K L C S + V + S D V+ WD + LP + V +H +P
Sbjct: 233 KN--QKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYHPADP 290
Query: 332 VI 333
+
Sbjct: 291 CL 292
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL Q + + + DG+Y LT G D L +W+ P + ++ GH +E +L
Sbjct: 20 TLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN--PL--RGTLLRTYSGH--GYE--VL 71
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
S D S + +G D+ V +WD + +++ K GH G VN F+ VI S S D
Sbjct: 72 DAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 341 QI 342
+
Sbjct: 132 SV 133
Score = 131 (51.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 53/213 (24%), Positives = 90/213 (42%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-----FMVLKGHKNAILDLHWT 109
GH V T++FN TVI SGS D + W DC++ L ++ I +
Sbjct: 107 GHAGKVNTVQFNEEATVILSGSIDSSVRCW----DCRSRKPEPVQTLDEARDGISSVK-V 161
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+D +I++ S D +R +D+ G+ S + C SR G ++S S D T +L
Sbjct: 162 SD-HEILAGSVDGRVRRYDLRMGQVTSDYV--GSPITCTCFSRDGQCTLIS-SLDSTLRL 217
Query: 170 WDMRQRGAIQTFP----DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
D + + KY++ S+ + + D V WDL +G +++ L
Sbjct: 218 LDKDTGELLGEYVGHKNQKYKLDCC-LSERDTHVVSCSEDGKVFFWDLVEGSLALALPVG 276
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+++ ++ P LLT M + W Y
Sbjct: 277 SNVVQSLAYHPADPCLLT-AMGGSIQYWREETY 308
Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/145 (24%), Positives = 68/145 (46%)
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177
A P+ RA ++ KQ+K + V + + G + GSD T KLW+ +
Sbjct: 2 AFPEPKPRAPELPR-KQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDK-TLKLWNPLRGTL 59
Query: 178 IQTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236
++T+ Y++ + S + + +GG D V +WD+ G+V +GH + + +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNE 119
Query: 237 DGSYLLTNGMDCKLCIWDMRPYAPQ 261
+ + +L+ +D + WD R P+
Sbjct: 120 EATVILSGSIDSSVRCWDCRSRKPE 144
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 274 (101.5 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 74/256 (28%), Positives = 123/256 (48%)
Query: 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS 119
V T+ F+P G + +G+ DR I LW + + V GH+ I L ++ +G I+S S
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRY-VFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 120 PDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ 179
D+T R WDVETG+ I K+ N V + S + V GS D ++W + +
Sbjct: 422 GDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAV-GSLDQIIRVWSVSGTLVER 479
Query: 180 TFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLR------------KGEVSMTLQGHQD 227
K + +++FS S + +G +D +KVW+L+ +G T GH D
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD 539
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ +++SPD + L+ D + WD++ C +GH+++ + C +SPD
Sbjct: 540 FVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTC----QGHKNSV---ISVC-FSPD 591
Query: 288 GSKVTAGSSDRMVYIW 303
G + +GS D IW
Sbjct: 592 GRQFASGSGDLRARIW 607
Score = 267 (99.0 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 80/298 (26%), Positives = 133/298 (44%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDR-DIFLWHVHGDCKNFMVLKGHKNAILDLHWTT---- 110
H S V +KF+ G +A+G + ++F V K F + + + DL+ T
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCNQAANVF--DVQTGKKLFTLHEESPDPSRDLYVRTIAFS 369
Query: 111 -DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
DG +++ + D+ ++ WD+ T K + H + S S G +VSGS D TA+L
Sbjct: 370 PDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGR-FIVSGSGDRTARL 428
Query: 170 WDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
WD+ I + +TA++ S I G +D ++VW + G + L+GH++ +
Sbjct: 429 WDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESV 487
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMRP--------YAPQNRCVKILEGHQHNFEKNLLK 281
++ SPD S LL+ +D + +W+++ P+ C GH +F +L
Sbjct: 488 YSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHT-DF---VLS 543
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
SPD +GS DR + WD + + GH SV F S S D
Sbjct: 544 VAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGD 601
Score = 217 (81.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 63/224 (28%), Positives = 107/224 (47%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGH-KNAILDLHWT 109
+ +GH+ +Y++ F+ G I SGS DR LW V G C +LK +N + + +
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQC----ILKLEIENGVTAIAIS 452
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+ I S D+ +R W V +G ++++ H V S S +++SGS D T K+
Sbjct: 453 PNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSS-ILLSGSLDKTIKV 510
Query: 170 WDM---RQRGAIQTFPD-----KYQ-----ITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
W++ R G P+ Y + +V+ S S +G D ++ WDL+ G
Sbjct: 511 WELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTG 570
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP 260
+ +T QGH++ + + SPDG + D + IW + P +P
Sbjct: 571 QSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPASP 614
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 56/217 (25%), Positives = 97/217 (44%)
Query: 140 EHNSFVNSCCP--SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF----PDKYQ---ITAV 190
EH S V CC S G L +G + A ++D++ + T PD + + +
Sbjct: 311 EHPSVV--CCVKFSNNGKYLA-TGCNQA-ANVFDVQTGKKLFTLHEESPDPSRDLYVRTI 366
Query: 191 SFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKL 250
+FS + TG D +K+WDL +V GH+ I + S +G ++++ D
Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTA 426
Query: 251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 310
+WD+ +C+ LE E + SP+ + GS D+++ +W + S +
Sbjct: 427 RLWDVET----GQCILKLE-----IENGVTAIAISPNDQFIAVGSLDQIIRVW-SVSGTL 476
Query: 311 LYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +L GH SV F ++ S S DK I + E+
Sbjct: 477 VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 84/302 (27%), Positives = 131/302 (43%)
Query: 37 PNGKQRTSSL-ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFM 94
P K R L + + L Q AV ++FN G + D+ + LW+ + G
Sbjct: 4 PEPKPRGPELPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LR 61
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
GH +LD + D S + S DK + WDV +G+ ++K H VN+ +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 155 PPLVVSGSDDGTAKLWDMRQRGA--IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVW 211
+++SGS D + + WD R R +QT + I++V SD ++ +G +D V+ +
Sbjct: 122 T-VILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKVSD--HEVLSGSVDGRVRRY 178
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
DLR G++ G IT S DG L + +D L + D + GH
Sbjct: 179 DLRMGQLFSDYVGSP--ITCTCFSRDGQCTLVSSLDSTLRLLDK----DTGELLGEYTGH 232
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
++ K L C S + V + S D VY WD + LP G V +H TEP
Sbjct: 233 KNQEYK--LDCCLSERDTHVVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYHPTEP 290
Query: 332 VI 333
+
Sbjct: 291 CL 292
Score = 152 (58.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 57/263 (21%), Positives = 112/263 (42%)
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
K L + A+ + + DG+ ++ DKTL+ W+ G ++ + H V
Sbjct: 16 KRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAG 75
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVK 209
S L SG D LWD+ ++ F ++ V F++ + I +G ID+ ++
Sbjct: 76 SFDNSSLC-SGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIR 134
Query: 210 VWDLR--KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI 267
WD R + E TL +D I+ + +S D +L+ +D ++ +D+R ++
Sbjct: 135 CWDCRSRRPEPVQTLDEARDGISSVKVS-DHE-VLSGSVDGRVRRYDLR-------MGQL 185
Query: 268 LEGHQHNFEKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN--ES 324
++ + + C +S DG S D + + D + +L + GH +
Sbjct: 186 FS----DYVGSPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDC 241
Query: 325 VFHATEPVIGSCSSDKQIYLGEI 347
+ + SCS D ++Y ++
Sbjct: 242 CLSERDTHVVSCSEDGKVYFWDL 264
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 54/213 (25%), Positives = 89/213 (41%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-----FMVLKGHKNAILDLHWT 109
GH V T++FN TVI SGS D I W DC++ L ++ I +
Sbjct: 107 GHAGKVNTVQFNEEATVILSGSIDSSIRCW----DCRSRRPEPVQTLDEARDGISSVK-V 161
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+D +++S S D +R +D+ G+ S + C SR G +VS S D T +L
Sbjct: 162 SD-HEVLSGSVDGRVRRYDLRMGQLFSDYV--GSPITCTCFSRDGQCTLVS-SLDSTLRL 217
Query: 170 WDMRQRGAIQTFP----DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
D + + +Y++ S+ + + D V WDL +G +++ L
Sbjct: 218 LDKDTGELLGEYTGHKNQEYKLDCC-LSERDTHVVSCSEDGKVYFWDLVEGALALALPVG 276
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
++ ++ P LLT M + W Y
Sbjct: 277 PGVVQSLAYHPTEPCLLT-AMGGSVHCWREEAY 308
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 84/302 (27%), Positives = 131/302 (43%)
Query: 37 PNGKQRTSSL-ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFM 94
P K R L + + L Q AV ++FN G + D+ + LW+ + G
Sbjct: 4 PEPKPRGPELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LR 61
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
GH +LD + D S + S DK + WDV +G+ ++K H VN+ +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 155 PPLVVSGSDDGTAKLWDMRQRGA--IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVW 211
+++SGS D T + WD R R +QT + I++V SD ++ G +D V+ +
Sbjct: 122 T-VILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSVKVSD--HEVLAGSVDGRVRRY 178
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
DLR G++ G IT + S DG L + +D L + D + GH
Sbjct: 179 DLRMGQLFSDYVGSP--ITCICFSRDGQCTLVSSLDSTLRLLDK----DTGELLGEYTGH 232
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
++ K L C S + V + S D V+ WD + LP G V +H TEP
Sbjct: 233 KNKEYK--LDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHPTEP 290
Query: 332 VI 333
+
Sbjct: 291 CL 292
Score = 139 (54.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 39/122 (31%), Positives = 58/122 (47%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL Q + + + DG+Y LT G D L +W+ P + ++ GH +E +L
Sbjct: 20 TLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN--PL--RGTLLRTYSGH--GYE--VL 71
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
S D S + +G D+ V +WD S +++ K GH G VN F+ VI S S D
Sbjct: 72 DAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 341 QI 342
I
Sbjct: 132 TI 133
Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 55/213 (25%), Positives = 89/213 (41%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-----FMVLKGHKNAILDLHWT 109
GH V T++FN TVI SGS D I W DC++ L ++ I +
Sbjct: 107 GHAGKVNTVQFNEEATVILSGSIDSTIRCW----DCRSRKPEPVQTLDEARDGISSVK-V 161
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+D ++++ S D +R +D+ G+ S + C SR G +VS S D T +L
Sbjct: 162 SD-HEVLAGSVDGRVRRYDLRMGQLFSDYV--GSPITCICFSRDGQCTLVS-SLDSTLRL 217
Query: 170 WDM---RQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
D G +K Y++ S+ + + D V WDL +G +++ L
Sbjct: 218 LDKDTGELLGEYTGHKNKEYKLDCC-LSERDTHVVSCSEDGKVFFWDLVEGALALALPVG 276
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
++ ++ P LLT M + W Y
Sbjct: 277 PGVVQSLTYHPTEPCLLT-AMGGSIQCWREETY 308
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 272 (100.8 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 77/307 (25%), Positives = 140/307 (45%)
Query: 48 SPIM---LLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNA 102
+PIM +L GH+ V T M+ + V+ +GS D + +W + G+ +V GH
Sbjct: 243 NPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMYTLV--GHTGG 298
Query: 103 ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162
+ + G I+S S D+T++ W G + + H S V C + G ++V+GS
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR--CMAMAGS-ILVTGS 355
Query: 163 DDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
D T ++WD+ + T + + V F + + +GG D VK+W+ G T
Sbjct: 356 RDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRCIRT 413
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKNLL 280
L GH + + + + S + + +D + +WD RP + CV +L+GH L
Sbjct: 414 LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQE--CVALLQGHTS------L 465
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
G G+ + + ++D V +WD ++ L GH ++ + ++ + S D
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDG 524
Query: 341 QIYLGEI 347
+ L +I
Sbjct: 525 TVKLWDI 531
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 43/133 (32%), Positives = 70/133 (52%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV---HG-DCKNFMVLKGHKNAILD 105
I LTGH + VY++ F +++ SGS D I +W G +C +L+GH +
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC--VALLQGHTSLTSG 468
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+ G+ ++S + D +R WD+ G + ++ H S + S G +V + SDDG
Sbjct: 469 MQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSL--QWFGRNMVATSSDDG 524
Query: 166 TAKLWDMRQRGAI 178
T KLWD+ +RGA+
Sbjct: 525 TVKLWDI-ERGAL 536
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 46/169 (27%), Positives = 84/169 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH +AV ++F+ GT + SG +D + +W+ H G C L GH N + L + ++
Sbjct: 374 LHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFESE 429
Query: 112 GSQIISASPDKTLRAWDVET--GKQIKKMAE-HNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
S + S S D ++R WD G++ + + H S + RG ++VS + D +
Sbjct: 430 RSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM--QLRGN-ILVSCNADSHVR 486
Query: 169 LWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+WD+ + + + IT++ + + + T D VK+WD+ +G
Sbjct: 487 VWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLWDIERG 534
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 50/173 (28%), Positives = 75/173 (43%)
Query: 164 DGTAKLWDMR--QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
D K W+ A+ + + IT + D D + TG DN +KVW + KGEV T
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMYT 291
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
L GH + +S G Y+++ D + +W + L+GH + ++
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWS----TVDGSLLHTLQGHT-----STVR 342
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
C + GS + GS D + +WD S R L L GH +V F T V G
Sbjct: 343 C-MAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSG 394
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 31/101 (30%), Positives = 53/101 (52%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
+ LL GH S M+ G ++ S + D + +W +H G C + +L GH++AI L W
Sbjct: 456 VALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVH--MLSGHRSAITSLQW 511
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC 149
+ + ++S D T++ WD+E G I+ + +S N C
Sbjct: 512 F-GRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGC 551
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 42/154 (27%), Positives = 68/154 (44%)
Query: 192 FSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD-MITGMSLSPDGSYLLTNGMDCKL 250
F A+DK D K W+ S L+GH+D +IT M + D L+T D L
Sbjct: 221 FERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD--VLVTGSDDNTL 278
Query: 251 CIWDMRPYAPQNRCVKILEGHQHN-FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+W + + + L GH + + +CG + +GS+DR V +W T
Sbjct: 279 KVWCI----DKGEVMYTLVGHTGGVWTSQISQCG-----RYIVSGSTDRTVKVWSTVDGS 329
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+L+ L GHT +V + V GS + +++
Sbjct: 330 LLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVW 363
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 272 (100.8 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 77/307 (25%), Positives = 140/307 (45%)
Query: 48 SPIM---LLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNA 102
+PIM +L GH+ V T M+ + V+ +GS D + +W + G+ +V GH
Sbjct: 243 NPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMYTLV--GHTGG 298
Query: 103 ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162
+ + G I+S S D+T++ W G + + H S V C + G ++V+GS
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR--CMAMAGS-ILVTGS 355
Query: 163 DDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
D T ++WD+ + T + + V F + + +GG D VK+W+ G T
Sbjct: 356 RDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRCIRT 413
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKNLL 280
L GH + + + + S + + +D + +WD RP + CV +L+GH L
Sbjct: 414 LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQE--CVALLQGHTS------L 465
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
G G+ + + ++D V +WD ++ L GH ++ + ++ + S D
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDG 524
Query: 341 QIYLGEI 347
+ L +I
Sbjct: 525 TVKLWDI 531
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 43/133 (32%), Positives = 70/133 (52%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV---HG-DCKNFMVLKGHKNAILD 105
I LTGH + VY++ F +++ SGS D I +W G +C +L+GH +
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC--VALLQGHTSLTSG 468
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
+ G+ ++S + D +R WD+ G + ++ H S + S G +V + SDDG
Sbjct: 469 MQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSL--QWFGRNMVATSSDDG 524
Query: 166 TAKLWDMRQRGAI 178
T KLWD+ +RGA+
Sbjct: 525 TVKLWDI-ERGAL 536
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 46/169 (27%), Positives = 84/169 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH +AV ++F+ GT + SG +D + +W+ H G C L GH N + L + ++
Sbjct: 374 LHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFESE 429
Query: 112 GSQIISASPDKTLRAWDVET--GKQIKKMAE-HNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
S + S S D ++R WD G++ + + H S + RG ++VS + D +
Sbjct: 430 RSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM--QLRGN-ILVSCNADSHVR 486
Query: 169 LWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+WD+ + + + IT++ + + + T D VK+WD+ +G
Sbjct: 487 VWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLWDIERG 534
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 50/173 (28%), Positives = 75/173 (43%)
Query: 164 DGTAKLWDMR--QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
D K W+ A+ + + IT + D D + TG DN +KVW + KGEV T
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMYT 291
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
L GH + +S G Y+++ D + +W + L+GH + ++
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWS----TVDGSLLHTLQGHT-----STVR 342
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334
C + GS + GS D + +WD S R L L GH +V F T V G
Sbjct: 343 C-MAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSG 394
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 31/101 (30%), Positives = 53/101 (52%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
+ LL GH S M+ G ++ S + D + +W +H G C + +L GH++AI L W
Sbjct: 456 VALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVH--MLSGHRSAITSLQW 511
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC 149
+ + ++S D T++ WD+E G I+ + +S N C
Sbjct: 512 F-GRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGC 551
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 42/154 (27%), Positives = 68/154 (44%)
Query: 192 FSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD-MITGMSLSPDGSYLLTNGMDCKL 250
F A+DK D K W+ S L+GH+D +IT M + D L+T D L
Sbjct: 221 FERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD--VLVTGSDDNTL 278
Query: 251 CIWDMRPYAPQNRCVKILEGHQHN-FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+W + + + L GH + + +CG + +GS+DR V +W T
Sbjct: 279 KVWCI----DKGEVMYTLVGHTGGVWTSQISQCG-----RYIVSGSTDRTVKVWSTVDGS 329
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+L+ L GHT +V + V GS + +++
Sbjct: 330 LLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVW 363
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 71/214 (33%), Positives = 105/214 (49%)
Query: 53 LTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V ++ P ++ SGS D+ I LW++ D N+ V L GH + + D
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDG 165
+ D +SAS DKT+R WD+E G+ + H S V S P R VVSGS D
Sbjct: 71 LSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQ---VVSGSRDK 127
Query: 166 TAKLWDM--RQRGAIQTFPDKYQITAVSFSDASDKI--YTGGIDNDVKVWDLRKGEVSMT 221
T K+W++ + I ++ V FS D + + G D VKVWDL + +
Sbjct: 128 TIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTS 187
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255
GH ++ +++SPDGS + G D L +WD+
Sbjct: 188 HYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDL 221
Score = 212 (79.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 66/261 (25%), Positives = 116/261 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
LTGH V + S S D+ I LW + G+C + V GH + +L + + D
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFV--GHTSDVLSVSISPD 116
Query: 112 GSQIISASPDKTLRAWDVETG-KQIKKMAEHNSFVNSCCPSRRGPPLV--VSGSDDGTAK 168
Q++S S DKT++ W++ K H+ +V SC P + VS D K
Sbjct: 117 NRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWV-SCVRFSPNPDNLTFVSAGWDKAVK 175
Query: 169 LWDMRQRGAIQT--FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
+WD+ + +++T + ++AV+ S +GG D + +WDL + +L+
Sbjct: 176 VWDL-ETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKA 234
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG-HQHNFEKNLLKCGWS 285
+ I + SP+ Y L + I+D+ + G + + E + WS
Sbjct: 235 N-INALVFSPN-RYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWS 292
Query: 286 PDGSKVTAGSSDRMVYIWDTT 306
PDG + +G +D ++ +W T
Sbjct: 293 PDGQTLFSGWTDNLIRVWQVT 313
Score = 196 (74.1 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 61/241 (25%), Positives = 106/241 (43%)
Query: 96 LKGHKNAILDLHWTTDGSQII-SASPDKTLRAW-----DVETGKQIKKMAEHNSFVNSCC 149
L+GH + L + I+ S S DK++ W DV G +++ H+ FV+ C
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S +S S D T +LWD+ + F + +VS S + ++ +G D +
Sbjct: 71 LSFDSH-YALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
Query: 209 KVWDLRKG-EVSMTLQGHQDMITGMSLSP--DGSYLLTNGMDCKLCIWDMRPYAPQNRCV 265
K+W++ + ++T GH D ++ + SP D ++ G D + +WD+ ++ +
Sbjct: 130 KIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHY 189
Query: 266 KILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESV 325
GH + SPDGS +G D + +WD LY L ++N V
Sbjct: 190 ----GHTGYVSAVTI----SPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKA-NINALV 240
Query: 326 F 326
F
Sbjct: 241 F 241
Score = 159 (61.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 49/214 (22%), Positives = 93/214 (43%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSF--SDAS-- 196
H+ +V S + P +++SGS D + LW++ R + + ++T S SD +
Sbjct: 14 HSGWVTSLSTAPENPDILLSGSRDKSIILWNL-VRDDVNYGVAQRRLTGHSHFVSDCALS 72
Query: 197 -DKIY--TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
D Y + D +++WDL KGE + GH + +S+SPD +++ D + IW
Sbjct: 73 FDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIW 132
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313
++ C + H+ + ++ +PD + D+ V +WD + +
Sbjct: 133 NII-----GNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTS 187
Query: 314 LPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG V+ + S D + L ++
Sbjct: 188 HYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDL 221
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 36/130 (27%), Positives = 59/130 (45%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGM-DCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T +S +P+ +L +G D + +W++ R + L GH H F +
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV-NESVFHATEPVIGSCS 337
C S D + S D+ + +WD ++ GHT V + S+ V+ S S
Sbjct: 69 ---CALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVV-SGS 124
Query: 338 SDKQIYLGEI 347
DK I + I
Sbjct: 125 RDKTIKIWNI 134
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 62/224 (27%), Positives = 106/224 (47%)
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177
A+P T AW +++++ H S V+S + L+ +G DD LW + +
Sbjct: 2 ATPVVTKTAW------KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC 55
Query: 178 IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236
I + + +V + + I G ++VWDL ++ TL GH+ I + P
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGS 295
G ++ + D + +WD+R + CV GH ++C +SPDG + + +
Sbjct: 116 YGEFVASGSQDTNIKLWDIR----RKGCVFRYRGHSQ-----AVRCLRFSPDGKWLASAA 166
Query: 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
D V +WD T+ +++ + PGHTG VN FH E ++ S SSD
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 215 (80.7 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 54/196 (27%), Positives = 94/196 (47%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ A G ++A+G D + LW ++ +C M L GH + + + T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNT 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + + FS + + D+ VK+WDL G++ GH +
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 230 TGMSLSPDGSYLLTNG 245
+ P+ YLL +G
Sbjct: 193 NVVEFHPN-EYLLASG 207
Score = 172 (65.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 12 NALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKF 65
N + +++ +V + P+ A +G R LE+ +L T GH++ + ++ F
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G +ASGS D +I LW + F +GH A+ L ++ DG + SA+ D T++
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
WD+ GK + + H VN L+ SGS D
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSD 210
Score = 139 (54.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++++ AS ++ TGG D V +W + K M+L GH + + L+ ++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ +WD+ + ++ L GH+ N+ + P G V +GS D + +WD
Sbjct: 83 QSGSIRVWDLEAA----KILRTLMGHK----ANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +++ GH+ +V F + S + D + L ++
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 225 HQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H ++ + L G L T G DC++ +W + P C+ L GH E L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINK--PN--CIMSLTGHTSPVESVRLN-- 72
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+P+ + AGS + +WD + +IL L GH ++ FH + S S D I
Sbjct: 73 -TPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 344 LGEI 347
L +I
Sbjct: 131 LWDI 134
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 83/302 (27%), Positives = 132/302 (43%)
Query: 37 PNGKQRTSSL-ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFM 94
P K R L + + L Q AV ++FN G + D+ + LW+ + G
Sbjct: 4 PEPKPRPPELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LR 61
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
GH +LD + D S + S DK + WDV +G+ ++K H VN+ +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 155 PPLVVSGSDDGTAKLWDMRQRGA--IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVW 211
+++SGS D + + WD R R +QT + +++V SD +I G +D V+ +
Sbjct: 122 T-VILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKVSD--HEILAGSVDGRVRRY 178
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
DLR G++ G IT S DG L + +D L + D + +GH
Sbjct: 179 DLRMGQLFSDYVGSP--ITCTCFSRDGQCTLVSSLDSTLRLLDK----DTGELLGEYKGH 232
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
++ K L C S + V + S D V+ WD + LP +G V +H TEP
Sbjct: 233 KNQEYK--LDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHPTEP 290
Query: 332 VI 333
+
Sbjct: 291 CL 292
Score = 140 (54.3 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 39/122 (31%), Positives = 58/122 (47%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL Q + + + DG+Y LT G D L +W+ P + ++ GH +E +L
Sbjct: 20 TLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN--PL--RGTLLRTYSGH--GYE--VL 71
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
S D S + +G D+ V +WD S +++ K GH G VN F+ VI S S D
Sbjct: 72 DAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 341 QI 342
I
Sbjct: 132 SI 133
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 53/217 (24%), Positives = 91/217 (41%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-----FMVLKGHKNAILDLHWT 109
GH V T++FN TVI SGS D I W DC++ L ++ + +
Sbjct: 107 GHAGKVNTVQFNEEATVILSGSIDSSIRCW----DCRSRRPEPVQTLDEARDGVSSVK-V 161
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+D +I++ S D +R +D+ G+ S + C SR G +VS S D T +L
Sbjct: 162 SD-HEILAGSVDGRVRRYDLRMGQLFSDYV--GSPITCTCFSRDGQCTLVS-SLDSTLRL 217
Query: 170 WDMRQRGAIQTFP----DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
D + + +Y++ S+ + + D V WDL +G +++ L
Sbjct: 218 LDKDTGELLGEYKGHKNQEYKLDCC-LSERDTHVVSCSEDGKVFFWDLVEGALALALPVG 276
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
++ ++ P LLT M + W Y ++
Sbjct: 277 SGVVQSLAYHPTEPCLLT-AMGGSVQCWREEAYEAED 312
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 18 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 77
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 78 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 135
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 136 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 194
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 195 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 254
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 255 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 306
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 307 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 88/320 (27%), Positives = 143/320 (44%)
Query: 15 STVSARPMEWSTVPYSAPQA-PGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIA 73
S+ +AR S+ P P P + + + + H V ++F+P ++A
Sbjct: 295 SSDAARRRSVSSFPVPQDNVDPHPGAGKEVRVPTTAMSVFDAHDGEVNAVQFSPGSRLLA 354
Query: 74 SGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG 132
+G DR + LW V GD C+ L G I + + + GS +++AS D R W V+
Sbjct: 355 TGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDY 414
Query: 133 KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSF 192
+ + H+ V S +VSGS D T KLWD+R + I+T +
Sbjct: 415 RLRHTLTGHSGKVLSA-KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVC 473
Query: 193 SDASDKIYTGGIDNDVKVWDLRKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKL 250
++ + +G D ++ WD+R + M L G IT + L+P+ + LL+ D L
Sbjct: 474 TEQC--VMSGHFDKKIRFWDIRSESIVREMELLGK---ITALDLNPERTELLSCSRDDLL 528
Query: 251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG--W-----SPDGSKVTAGSSDRMVYIW 303
I D+R + + F KCG W SPDGS V AG+++ +YIW
Sbjct: 529 KIIDLR-----------INAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIW 577
Query: 304 DTTSRRILYKLPGH-TGSVN 322
+ S ++ L H + S+N
Sbjct: 578 NVLSGKVEKVLSKHHSSSIN 597
Score = 228 (85.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 68/256 (26%), Positives = 118/256 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L+G + + +++F+ AG+ + + S+D +W V D + L GH +L + D
Sbjct: 378 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD-DYRLRHTLTGHSGKVLSAKFLLDN 436
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++I+S S D+TL+ WD+ + IK + +S + C + V+SG D + WD+
Sbjct: 437 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQ----CVMSGHFDKKIRFWDI 492
Query: 173 RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ--GHQ---D 227
R ++ +ITA+ + ++ + D+ +K+ DLR V T G + D
Sbjct: 493 RSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSD 552
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
T SPDGSY+ + L IW++ + K+L H H+ N + WSP
Sbjct: 553 W-TRAVFSPDGSYVAAGAAEGSLYIWNVL----SGKVEKVLSKH-HSSSINAV--AWSPA 604
Query: 288 GSKVTAGSSDRMVYIW 303
GS V +W
Sbjct: 605 GSHVVTVDKGSKAVLW 620
Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 27 VPYSAPQAPGPNGKQRTSSLESPIMLLTGHQ 57
VP +PG +G S L+ L HQ
Sbjct: 63 VPNRHEISPGHDGSWNDSQLQEMAQLRIKHQ 93
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 276 (102.2 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 72/255 (28%), Positives = 125/255 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V++ + + G +I SGS DR + +W + G C + L+GH + + +H
Sbjct: 1031 LVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVH--TLQGHTSTVRCMH--LH 1084
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
GS+++S S D TLR WD+E G + + H + V C G L+VSG+ D K+W
Sbjct: 1085 GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVR--CVQYDGK-LIVSGAYDYMVKIWH 1141
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
++ + T ++ ++ F + +G +D ++VWD+ G TL GHQ + +
Sbjct: 1142 PERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDVETGNCKHTLMGHQSLTS 1199
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG-HQHNFEKNLLKCGWSPDGS 289
GM L + L++ D + +WD+ +C++ L G ++H+ L+ +
Sbjct: 1200 GMELRQN--ILVSGNADSTVKVWDITT----GQCLQTLSGPNKHHSAVTCLQF----NSR 1249
Query: 290 KVTAGSSDRMVYIWD 304
V S D V +WD
Sbjct: 1250 FVVTSSDDGTVKLWD 1264
Score = 261 (96.9 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 75/236 (31%), Positives = 114/236 (48%)
Query: 42 RTSSLESPIMLLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGH 99
R+ + P +L GH V T ++F+ G I SGS D + +W V+G C +V GH
Sbjct: 980 RSRPVRKP-KVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLV--GH 1034
Query: 100 KNAILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
+ W++ G+ IIS S D+TL+ WD+++G + + H S V C G
Sbjct: 1035 TGGV----WSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVR--CMHLHGSK- 1087
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKG 216
VVSGS D T ++WD+ Q + + AV K I +G D VK+W +
Sbjct: 1088 VVSGSRDATLRVWDIEQGSCLHVLVG--HLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQ 1145
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
E TLQGH + + SL DG ++++ +D + +WD+ C L GHQ
Sbjct: 1146 ECLHTLQGHTNRV--YSLQFDGLHVVSGSLDTSIRVWDVET----GNCKHTLMGHQ 1195
Score = 236 (88.1 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 65/212 (30%), Positives = 101/212 (47%)
Query: 108 WTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
W++ G+ IIS S D+TL+ WD+++G + + H S V C G VVSGS D
Sbjct: 1039 WSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVR--CMHLHGSK-VVSGSRDA 1095
Query: 166 TAKLWDMRQRGAIQTFPDKYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQG 224
T ++WD+ Q + + AV K I +G D VK+W + E TLQG
Sbjct: 1096 TLRVWDIEQGSCLHVLVG--HLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQG 1153
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
H + + SL DG ++++ +D + +WD+ C L GHQ L G
Sbjct: 1154 HTNRV--YSLQFDGLHVVSGSLDTSIRVWDVET----GNCKHTLMGHQS------LTSGM 1201
Query: 285 SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
+ + +G++D V +WD T+ + L L G
Sbjct: 1202 ELRQNILVSGNADSTVKVWDITTGQCLQTLSG 1233
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 65/250 (26%), Positives = 111/250 (44%)
Query: 95 VLKGHKNAILD-LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRR 153
VLKGH + ++ L ++ G++I+S S D TL+ W GK ++ + H V S S+
Sbjct: 989 VLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS---SQM 1043
Query: 154 GPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
+++SGS D T K+WDM + T S K+ +G D ++VWD+
Sbjct: 1044 SGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGS-KVVSGSRDATLRVWDI 1102
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
+G L GH + + DG +++ D + IW + + C+ L+GH +
Sbjct: 1103 EQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIW----HPERQECLHTLQGHTN 1156
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
L+ DG V +GS D + +WD + + L GH + V
Sbjct: 1157 RVYS--LQF----DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVS 1210
Query: 334 GSCSSDKQIY 343
G+ S +++
Sbjct: 1211 GNADSTVKVW 1220
Score = 227 (85.0 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 57/175 (32%), Positives = 97/175 (55%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDL 106
S + +L GH +AV ++++ G +I SG++D + +WH +C + L+GH N + L
Sbjct: 1106 SCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLH--TLQGHTNRVYSL 1161
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+ DG ++S S D ++R WDVETG + H S + S R+ ++VSG+ D T
Sbjct: 1162 QF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQS-LTSGMELRQN--ILVSGNADST 1216
Query: 167 AKLWDMRQRGAIQTF--PDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGE 217
K+WD+ +QT P+K+ +T + F+ S + T D VK+WD++ G+
Sbjct: 1217 VKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDVKTGD 1269
Score = 210 (79.0 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 63/218 (28%), Positives = 94/218 (43%)
Query: 127 WDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ 186
W ++ K + H+ V +C +VSGSDD T K+W ++T
Sbjct: 979 WRSRPVRKPKVLKGHDDHVITCLQFSGNR--IVSGSDDNTLKVWSAVNGKCLRTLVG--H 1034
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
V S S I +G D +KVWD+ G TLQGH + M L GS +++
Sbjct: 1035 TGGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGS 1092
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
D L +WD+ Q C+ +L GH ++C DG + +G+ D MV IW
Sbjct: 1093 RDATLRVWDIE----QGSCLHVLVGHLA-----AVRCV-QYDGKLIVSGAYDYMVKIWHP 1142
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+ L+ L GHT V F V GS + +++
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVW 1180
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 67/215 (31%), Positives = 109/215 (50%)
Query: 53 LTGHQSAVYTMKFNPAG--TVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDL 106
L GH V ++ + AG ++ S S D+ + W + GD + F V KGH + + D
Sbjct: 13 LEGHNGWVTSLATS-AGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
T DG+ +SAS DKTLR WDV TG+ ++ H S V S ++ +++SGS D T
Sbjct: 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKT 130
Query: 167 AKLWDMRQR--GAIQTFPDKY-QITAVSFSDASDK---IYTGGIDNDVKVWDLRKGEVSM 220
K+W ++ + + D Q+ V A D I + G D VK W+L + ++
Sbjct: 131 IKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA 190
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255
GH I ++ SPDG+ + + G D ++ +W++
Sbjct: 191 DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNL 225
Score = 216 (81.1 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 60/261 (22%), Positives = 110/261 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
P+ GH V G S S D+ + LW V + + GHK+ ++ +
Sbjct: 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDV-ATGETYQRFVGHKSDVMSVDI 115
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPP---LVVSGSD 163
S IIS S DKT++ W ++ G+ + + HN +V+ P+ + ++S +
Sbjct: 116 DKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN 174
Query: 164 DGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K W++ Q F I ++ S I + G D ++ +W+L + TL
Sbjct: 175 DKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
QD + ++ SP+ Y L + ++ + P + G+ E + +
Sbjct: 235 SA-QDEVFSLAFSPN-RYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSL 292
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
WS DG + AG +D ++ +W
Sbjct: 293 AWSADGQTLFAGYTDNVIRVW 313
Score = 208 (78.3 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 62/233 (26%), Positives = 106/233 (45%)
Query: 96 LKGHKNAILDLHWTTDGSQ--IISASPDKTLRAW-----DVETGKQIKKMAEHNSFVNSC 148
L+GH + L T+ G ++SAS DKTL +W D + G ++ H+ V C
Sbjct: 13 LEGHNGWVTSLA-TSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 149 CPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDND 207
+ G +S S D T +LWD+ Q F K + +V + I +G D
Sbjct: 72 TLTADGA-YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130
Query: 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSP------DGSYLLTNGMDCKLCIWDMRPYAPQ 261
+KVW + KG+ TL GH D ++ + + P D +++ G D + W++ + +
Sbjct: 131 IKVWTI-KGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE 189
Query: 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+ GH N N L SPDG+ + + D + +W+ +++ +Y L
Sbjct: 190 ADFI----GHNSNI--NTLTA--SPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234
Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/213 (22%), Positives = 87/213 (40%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLW----DMRQRGA-IQTFPDKYQITAVSFSDA 195
HN +V S S P L++S S D T W D ++ G +++F I +
Sbjct: 16 HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-DCTLT 74
Query: 196 SDKIY--TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
+D Y + D +++WD+ GE GH+ + + + S +++ D + +W
Sbjct: 75 ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW 134
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT--AGSSDRMVYIWDTTSRRIL 311
++ +C+ L GH + + D VT + +D+MV W+ +I
Sbjct: 135 TIK-----GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE 189
Query: 312 YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
GH ++N +I S D +I L
Sbjct: 190 ADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 269 (99.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 63/227 (27%), Positives = 108/227 (47%)
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177
A+P T AW +++++ H S V+S + L+ +G DD LW + +
Sbjct: 2 ATPVVTKTAW------KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC 55
Query: 178 IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236
I + + +V + + I G ++VWDL ++ TL GH+ I + P
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGS 295
G ++ + D + +WD+R + CV GH ++C +SPDG + + +
Sbjct: 116 YGEFVASGSQDTNIKLWDIR----RKGCVFRYRGHSQ-----AVRCLRFSPDGKWLASAA 166
Query: 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
D V +WD T+ +++ + PGHTG VN FH E ++ S SSD+ I
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 228 (85.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 60/222 (27%), Positives = 105/222 (47%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ A G ++A+G D + LW ++ +C M L GH + + + T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNT 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + + FS + + D+ VK+WDL G++ GH +
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 230 TGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEG 270
+ P+ YLL +G D + WD+ + + V +EG
Sbjct: 193 NVVEFHPN-EYLLASGSSDRTIRFWDLEKF----QVVSCIEG 229
Score = 196 (74.1 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 12 NALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKF 65
N + +++ +V + P+ A +G R LE+ +L T GH++ + ++ F
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G +ASGS D +I LW + F +GH A+ L ++ DG + SA+ D T++
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
WD+ GK + + H VN L+ SGS D T + WD+ +
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 196 (74.1 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 51/213 (23%), Positives = 96/213 (45%)
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDDGTAKL 169
G + + D + W + I + H S V S R P L+V+GS G+ ++
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV---RLNTPEELIVAGSQSGSIRV 89
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ ++T K I ++ F + + +G D ++K+WD+R+ +GH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + SPDG +L + D + +WD+ + + GH N+++ + P+
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPGHTGPV--NVVE--FHPNE 201
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+ +GSSDR + WD +++ + G G V
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++++ AS ++ TGG D V +W + K M+L GH + + L+ ++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ +WD+ + ++ L GH+ N+ + P G V +GS D + +WD
Sbjct: 83 QSGSIRVWDLEAA----KILRTLMGHK----ANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +++ GH+ +V F + S + D + L ++
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 225 HQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H ++ + L G L T G DC++ +W + P C+ L GH E L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINK--PN--CIMSLTGHTSPVESVRLN-- 72
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+P+ + AGS + +WD + +IL L GH ++ FH + S S D I
Sbjct: 73 -TPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 344 LGEI 347
L +I
Sbjct: 131 LWDI 134
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 275 (101.9 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 76/252 (30%), Positives = 118/252 (46%)
Query: 88 GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNS 147
GD + +LKGH + + +++D Q+++ S D T+R W+ TG K H V S
Sbjct: 764 GDLQK--ILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLS 821
Query: 148 CCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDND 207
S G +VSGS + KLWD ++T + +V+FS S +I G D
Sbjct: 822 VAISSDGRQ-IVSGSIEAV-KLWDAATGDLLKTLASGFA-GSVAFSPDSRQIAAGFKDGK 878
Query: 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI 267
+ +WD G + TL+ H I ++ SPD L+T D + WD+ Q
Sbjct: 879 IFIWDAA-GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAV--- 934
Query: 268 LEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFH 327
GH + +L SPDG + +GS+D+ + +WD + + L GH +V + VF
Sbjct: 935 --GHSKHVTTMVL----SPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFS 988
Query: 328 ATEPVIGSCSSD 339
I SCSS+
Sbjct: 989 LDNRQIVSCSSE 1000
Score = 254 (94.5 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 71/280 (25%), Positives = 133/280 (47%)
Query: 62 TMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD 121
++ F+P IA+G D IF+W G + L+ H AI+ + ++ D Q+++ S D
Sbjct: 860 SVAFSPDSRQIAAGFKDGKIFIWDAAGTLQK--TLERHPGAIMSIAFSPDVKQLVTCSTD 917
Query: 122 KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF 181
T++ WD+ G +++ H+ V + S G ++ SGS D T KLWD +T
Sbjct: 918 STIKRWDITIGG-VQEAVGHSKHVTTMVLSPDGK-VIASGSADKTIKLWDAATGDLQKTL 975
Query: 182 PDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSY 240
+ V FS + +I + + VK+WD G+V + + D+ T +++SPDG +
Sbjct: 976 TGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNSFES-DDVFTIVAVSPDGKH 1033
Query: 241 LLTNGMDCKLCIWDMRP---------YAPQ-NRCVKI----LEGHQHNFEKNLLKCGWSP 286
+ + + ++ +WDM Y + + V ++ + F + +SP
Sbjct: 1034 IASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSP 1093
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVF 326
D + + S+DR + +WD + + +LP H+ S+ F
Sbjct: 1094 DAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAF 1133
Score = 206 (77.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 69/256 (26%), Positives = 108/256 (42%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH V TM +P G VIASGS D+ I LW L GH + + + ++ D Q
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQ-KTLTGHLDTVEKVVFSLDNRQ 993
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
I+S S + ++ WD TGK ++ E + S G + SG +G KLWDM
Sbjct: 994 IVSCSSE-AVKIWDAATGK-VQNSFESDDVFTIVAVSPDGKH-IASGHCNGRIKLWDMAT 1050
Query: 175 RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSL 234
++T + D + T +V+D++ E Q ITG+
Sbjct: 1051 GSLLKTM--------AGYRSKFDSLVT------TEVFDIQLQEAIFNTQ-----ITGLVF 1091
Query: 235 SPDGSYLLTNGMDCKLCIWDMRPYAPQNR--CVK---ILEGHQHN--FEKNLLKCGWSPD 287
SPD +L+ D + +WD Q R C I + + + + +S D
Sbjct: 1092 SPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSD 1151
Query: 288 GSKVTAGSSDRMVYIW 303
G + A S+D+ + +W
Sbjct: 1152 GQHIAAASADKTIRVW 1167
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 87/323 (26%), Positives = 132/323 (40%)
Query: 41 QRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCK-------- 91
Q+T S P Q V M F P +I SG +D + LW GD +
Sbjct: 655 QKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGI 714
Query: 92 ---NFMVLKGHKNAILDLH---WTTDGSQIISA--SPDKT-LRAWDVETGKQIKKMAEHN 142
N+ L+ + LH ++ D QI + S D T + +D TG K + H+
Sbjct: 715 SKVNYTYLQPPEQGGYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHS 774
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYT 201
++ S LV +GS D T +LW+ +TF + +V+ S +I +
Sbjct: 775 HECSTMAFSSDSRQLV-TGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVS 833
Query: 202 GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ 261
G I+ VK+WD G++ TL ++ SPD + D K+ IWD
Sbjct: 834 GSIEA-VKLWDAATGDLLKTLAS--GFAGSVAFSPDSRQIAAGFKDGKIFIWDAA----- 885
Query: 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
K LE H ++ +SPD ++ S+D + WD T + + GH+ V
Sbjct: 886 GTLQKTLERHPGA----IMSIAFSPDVKQLVTCSTDSTIKRWDITIGGV-QEAVGHSKHV 940
Query: 322 NESVFHATEPVIGSCSSDKQIYL 344
V VI S S+DK I L
Sbjct: 941 TTMVLSPDGKVIASGSADKTIKL 963
Score = 188 (71.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 69/286 (24%), Positives = 112/286 (39%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKN 101
T LE + GH V ++ + G I SGS + + LW GD + G
Sbjct: 805 TGDLEKTFV---GHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGDLLKTLA-SGFAG 859
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
++ ++ D QI + D + WD G K + H + S S LV
Sbjct: 860 SVA---FSPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTC- 914
Query: 162 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
S D T K WD+ G + +T + S I +G D +K+WD G++ T
Sbjct: 915 STDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKT 974
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN--L 279
L GH D + + S D +++ + + IWD QN +FE +
Sbjct: 975 LTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQN-----------SFESDDVF 1022
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESV 325
SPDG + +G + + +WD + +L + G+ + V
Sbjct: 1023 TIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLV 1068
Score = 130 (50.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 56/213 (26%), Positives = 88/213 (41%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGH--------KN 101
I LTGH AV+ + F+P G IASGS I LW + H +
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQE 672
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
+ + + D IIS D ++ WD TG + +++A+H ++ + PP
Sbjct: 673 QVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDR-QEIADHFG-ISKVNYTYLQPP----- 725
Query: 162 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
+ G L GA D QI A +S S I ++D G++
Sbjct: 726 -EQGGYGL----HAGAFSA--DCKQIAAFGWSRDSTCIM---------LFDTATGDLQKI 769
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
L+GH + M+ S D L+T +DC + +W+
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWN 802
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 263 (97.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDIST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDFKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 263 (97.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 86/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 269 (99.8 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 71/299 (23%), Positives = 128/299 (42%)
Query: 54 TGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
TGH V +++ P G ++ S D + +W +GD + GH A+ D+ ++ DG
Sbjct: 301 TGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAVRDICFSNDG 360
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDDGTAKL 169
+ +S D+ R WD ETGK + N + C P + G D
Sbjct: 361 RRFLSCGYDRQTRLWDTETGKILSSFT--NGKIPYCIKFNPDDDKQEQFLCGGSDKKIIQ 418
Query: 170 WDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG-HQ 226
WD++ +Q + D++ + ++F D + + T D ++VWD V +
Sbjct: 419 WDIKSNQIVQEY-DQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPVVIKYISDPSM 477
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ ++L P G + +D ++ I+ R N+ + L GH N + G+SP
Sbjct: 478 HSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFL-GH--NVSGYACQLGFSP 534
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPV-IGSCSSDKQIYL 344
DG + +G S + WD + +I+ + H + EP + +CS + +I L
Sbjct: 535 DGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAPLEPSKVATCSWNNEIKL 593
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 60/273 (21%), Positives = 111/273 (40%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILD--LH 107
I GH AV + F+ G S +DR LW D + +L N + +
Sbjct: 341 IQTYMGHSQAVRDICFSNDGRRFLSCGYDRQTRLW----DTETGKILSSFTNGKIPYCIK 396
Query: 108 WTTDGS---QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSG 161
+ D Q + DK + WD+++ + +++ +H VN+ +RR V+
Sbjct: 397 FNPDDDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRR----FVTS 452
Query: 162 SDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLR---KG 216
SDD + ++WD I+ P + + AV+ +DN + ++ R +
Sbjct: 453 SDDKSLRVWDWGIPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRM 512
Query: 217 EVSMTLQGHQDMITG----MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
GH ++G + SPDG ++ + K WD + ++ +K + H
Sbjct: 513 NKKKRFLGHN--VSGYACQLGFSPDGKFIYSGDSTGKAFFWDWKT----SKIIKTINAH- 565
Query: 273 HNFEKNLLKCGWSP-DGSKVTAGSSDRMVYIWD 304
+N + W+P + SKV S + + +WD
Sbjct: 566 NNV---CIGIEWAPLEPSKVATCSWNNEIKLWD 595
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 271 (100.5 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 74/265 (27%), Positives = 126/265 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V++ + +I SGS DR + +W+ G+C + L GH + + +H
Sbjct: 470 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIH--TLYGHTSTVRCMH--LH 523
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+++S S D TLR WD+ETG+ + + H + V C G VVSG+ D K+WD
Sbjct: 524 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRR-VVSGAYDFMVKVWD 580
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ T ++ ++ F + +G +D ++VWD+ G TL GHQ + +
Sbjct: 581 PETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 638
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG-HQHNFEKNLLKCGWSPDGS 289
GM L + L++ D + IWD++ +C++ L+G H+H L+ + +
Sbjct: 639 GMELKDN--ILVSGNADSTVKIWDIKT----GQCLQTLQGPHKHQSAVTCLQF----NKN 688
Query: 290 KVTAGSSDRMVYIWDTTSRRILYKL 314
V S D V +WD + + L
Sbjct: 689 FVITSSDDGTVKLWDLRTGEFIRNL 713
Score = 248 (92.4 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 74/236 (31%), Positives = 110/236 (46%)
Query: 42 RTSSLESPIMLLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGH 99
R L+SP +L GH V T ++F G I SGS D + +W V G C +V GH
Sbjct: 419 RRGDLKSP-KVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GH 473
Query: 100 KNAILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
+ W++ + IIS S D+TL+ W+ ETG+ I + H S V C
Sbjct: 474 TGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KR 526
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
VVSGS D T ++WD+ + + V + ++ +G D VKVWD
Sbjct: 527 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETE 584
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
TLQGH + + SL DG ++++ +D + +WD+ C+ L GHQ
Sbjct: 585 TCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ 634
Score = 237 (88.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 70/262 (26%), Positives = 118/262 (45%)
Query: 84 WHVHGDCKNFMVLKGHKNAILD-LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
W GD K+ VLKGH + ++ L + G++I+S S D TL+ W TGK ++ + H
Sbjct: 418 WR-RGDLKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 474
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG 202
V S S+ +++SGS D T K+W+ I T + T ++ +G
Sbjct: 475 GGVWS---SQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHEKRVVSG 530
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D ++VWD+ G+ L GH + + DG +++ D + +WD P+
Sbjct: 531 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD-----PET 583
Query: 263 R-CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C+ L+GH + L+ DG V +GS D + +WD + ++ L GH
Sbjct: 584 ETCLHTLQGHTNRVYS--LQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 637
Query: 322 NESVFHATEPVIGSCSSDKQIY 343
+ V G+ S +I+
Sbjct: 638 SGMELKDNILVSGNADSTVKIW 659
Score = 217 (81.4 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 61/203 (30%), Positives = 93/203 (45%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
IIS S D+TL+ W+ ETG+ I + H S V C VVSGS D T ++WD+
Sbjct: 487 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KRVVSGSRDATLRVWDIET 543
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + V + ++ +G D VKVWD TLQGH + + S
Sbjct: 544 GQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTNRV--YS 599
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
L DG ++++ +D + +WD+ C+ L GHQ L G + + +
Sbjct: 600 LQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQS------LTSGMELKDNILVS 649
Query: 294 GSSDRMVYIWDTTSRRILYKLPG 316
G++D V IWD + + L L G
Sbjct: 650 GNADSTVKIWDIKTGQCLQTLQG 672
Score = 173 (66.0 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 42/131 (32%), Positives = 74/131 (56%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E+ + L GH + VY+++F+ G + SGS D I +W V G+C + L GH++
Sbjct: 584 ETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIH--TLTGHQSLTSG 639
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA---EHNSFVNSCCPSRRGPPLVVSGS 162
+ + ++S + D T++ WD++TG+ ++ + +H S V +C + V++ S
Sbjct: 640 ME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAV-TCLQFNKN--FVITSS 694
Query: 163 DDGTAKLWDMR 173
DDGT KLWD+R
Sbjct: 695 DDGTVKLWDLR 705
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 269 (99.8 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 63/227 (27%), Positives = 108/227 (47%)
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177
A+P T AW +++++ H S V+S + L+ +G DD LW + +
Sbjct: 2 ATPVVTKTAW------KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC 55
Query: 178 IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236
I + + +V + + I G ++VWDL ++ TL GH+ I + P
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGS 295
G ++ + D + +WD+R + CV GH ++C +SPDG + + +
Sbjct: 116 YGEFVASGSQDTNIKLWDIR----RKGCVFRYRGHSQ-----AVRCLRFSPDGKWLASAA 166
Query: 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
D V +WD T+ +++ + PGHTG VN FH E ++ S SSD+ I
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 248 (92.4 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 69/257 (26%), Positives = 120/257 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ A G ++A+G D + LW ++ +C M L GH + + + T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNT 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + + FS + + D+ VK+WDL G++ GH +
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 230 TGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ P+ YLL +G D + WD+ + + V +EG L ++PDG
Sbjct: 193 NVVEFHPN-EYLLASGSSDRTIRFWDLEKF----QVVSCIEGEPGPVRSVL----FNPDG 243
Query: 289 SKVTAGSSDRM-VYIWD 304
+ +G D + VY W+
Sbjct: 244 CCLYSGCQDSLRVYGWE 260
Score = 206 (77.6 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 55/236 (23%), Positives = 105/236 (44%)
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDDGTAKL 169
G + + D + W + I + H S V S R P L+V+GS G+ ++
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV---RLNTPEELIVAGSQSGSIRV 89
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ ++T K I ++ F + + +G D ++K+WD+R+ +GH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + SPDG +L + D + +WD+ + + GH N+++ + P+
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPGHTGPV--NVVE--FHPNE 201
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS-CSSDKQIY 343
+ +GSSDR + WD +++ + G G V +F+ + S C ++Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 201 (75.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 56/209 (26%), Positives = 99/209 (47%)
Query: 12 NALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKF 65
N + +++ +V + P+ A +G R LE+ +L T GH++ + ++ F
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G +ASGS D +I LW + F +GH A+ L ++ DG + SA+ D T++
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DK 184
WD+ GK + + H VN L+ SGS D T + WD+ + + +
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 185 YQITAVSFSDASDKIYTGGIDN-DVKVWD 212
+ +V F+ +Y+G D+ V W+
Sbjct: 232 GPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++++ AS ++ TGG D V +W + K M+L GH + + L+ ++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ +WD+ + ++ L GH+ N+ + P G V +GS D + +WD
Sbjct: 83 QSGSIRVWDLEAA----KILRTLMGHK----ANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +++ GH+ +V F + S + D + L ++
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 225 HQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H ++ + L G L T G DC++ +W + P C+ L GH E L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINK--PN--CIMSLTGHTSPVESVRLN-- 72
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+P+ + AGS + +WD + +IL L GH ++ FH + S S D I
Sbjct: 73 -TPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 344 LGEI 347
L +I
Sbjct: 131 LWDI 134
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 269 (99.8 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 63/227 (27%), Positives = 108/227 (47%)
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177
A+P T AW +++++ H S V+S + L+ +G DD LW + +
Sbjct: 2 ATPVVTKTAW------KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC 55
Query: 178 IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236
I + + +V + + I G ++VWDL ++ TL GH+ I + P
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGS 295
G ++ + D + +WD+R + CV GH ++C +SPDG + + +
Sbjct: 116 YGEFVASGSQDTNIKLWDIR----RKGCVFRYRGHSQ-----AVRCLRFSPDGKWLASAA 166
Query: 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
D V +WD T+ +++ + PGHTG VN FH E ++ S SSD+ I
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 248 (92.4 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 69/257 (26%), Positives = 120/257 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ A G ++A+G D + LW ++ +C M L GH + + + T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNT 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + + FS + + D+ VK+WDL G++ GH +
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 230 TGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ P+ YLL +G D + WD+ + + V +EG L ++PDG
Sbjct: 193 NVVEFHPN-EYLLASGSSDRTIRFWDLEKF----QVVSCIEGEPGPVRSVL----FNPDG 243
Query: 289 SKVTAGSSDRM-VYIWD 304
+ +G D + VY W+
Sbjct: 244 CCLYSGCQDSLRVYGWE 260
Score = 206 (77.6 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 55/236 (23%), Positives = 105/236 (44%)
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDDGTAKL 169
G + + D + W + I + H S V S R P L+V+GS G+ ++
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV---RLNTPEELIVAGSQSGSIRV 89
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ ++T K I ++ F + + +G D ++K+WD+R+ +GH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + SPDG +L + D + +WD+ + + GH N+++ + P+
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPGHTGPV--NVVE--FHPNE 201
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS-CSSDKQIY 343
+ +GSSDR + WD +++ + G G V +F+ + S C ++Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 201 (75.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 56/209 (26%), Positives = 99/209 (47%)
Query: 12 NALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKF 65
N + +++ +V + P+ A +G R LE+ +L T GH++ + ++ F
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G +ASGS D +I LW + F +GH A+ L ++ DG + SA+ D T++
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DK 184
WD+ GK + + H VN L+ SGS D T + WD+ + + +
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 185 YQITAVSFSDASDKIYTGGIDN-DVKVWD 212
+ +V F+ +Y+G D+ V W+
Sbjct: 232 GPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++++ AS ++ TGG D V +W + K M+L GH + + L+ ++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ +WD+ + ++ L GH+ N+ + P G V +GS D + +WD
Sbjct: 83 QSGSIRVWDLEAA----KILRTLMGHK----ANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +++ GH+ +V F + S + D + L ++
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 225 HQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H ++ + L G L T G DC++ +W + P C+ L GH E L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINK--PN--CIMSLTGHTSPVESVRLN-- 72
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+P+ + AGS + +WD + +IL L GH ++ FH + S S D I
Sbjct: 73 -TPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 344 LGEI 347
L +I
Sbjct: 131 LWDI 134
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 269 (99.8 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 63/227 (27%), Positives = 108/227 (47%)
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177
A+P T AW +++++ H S V+S + L+ +G DD LW + +
Sbjct: 2 ATPVVTKTAW------KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC 55
Query: 178 IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236
I + + +V + + I G ++VWDL ++ TL GH+ I + P
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGS 295
G ++ + D + +WD+R + CV GH ++C +SPDG + + +
Sbjct: 116 YGEFVASGSQDTNIKLWDIR----RKGCVFRYRGHSQ-----AVRCLRFSPDGKWLASAA 166
Query: 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
D V +WD T+ +++ + PGHTG VN FH E ++ S SSD+ I
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 248 (92.4 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 69/257 (26%), Positives = 120/257 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ A G ++A+G D + LW ++ +C M L GH + + + T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNT 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + + FS + + D+ VK+WDL G++ GH +
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 230 TGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ P+ YLL +G D + WD+ + + V +EG L ++PDG
Sbjct: 193 NVVEFHPN-EYLLASGSSDRTIRFWDLEKF----QVVSCIEGEPGPVRSVL----FNPDG 243
Query: 289 SKVTAGSSDRM-VYIWD 304
+ +G D + VY W+
Sbjct: 244 CCLYSGCQDSLRVYGWE 260
Score = 206 (77.6 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 55/236 (23%), Positives = 105/236 (44%)
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDDGTAKL 169
G + + D + W + I + H S V S R P L+V+GS G+ ++
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV---RLNTPEELIVAGSQSGSIRV 89
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ ++T K I ++ F + + +G D ++K+WD+R+ +GH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + SPDG +L + D + +WD+ + + GH N+++ + P+
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPGHTGPV--NVVE--FHPNE 201
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS-CSSDKQIY 343
+ +GSSDR + WD +++ + G G V +F+ + S C ++Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 201 (75.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 56/209 (26%), Positives = 99/209 (47%)
Query: 12 NALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKF 65
N + +++ +V + P+ A +G R LE+ +L T GH++ + ++ F
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G +ASGS D +I LW + F +GH A+ L ++ DG + SA+ D T++
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DK 184
WD+ GK + + H VN L+ SGS D T + WD+ + + +
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 185 YQITAVSFSDASDKIYTGGIDN-DVKVWD 212
+ +V F+ +Y+G D+ V W+
Sbjct: 232 GPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++++ AS ++ TGG D V +W + K M+L GH + + L+ ++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ +WD+ + ++ L GH+ N+ + P G V +GS D + +WD
Sbjct: 83 QSGSIRVWDLEAA----KILRTLMGHK----ANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +++ GH+ +V F + S + D + L ++
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 225 HQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H ++ + L G L T G DC++ +W + P C+ L GH E L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINK--PN--CIMSLTGHTSPVESVRLN-- 72
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+P+ + AGS + +WD + +IL L GH ++ FH + S S D I
Sbjct: 73 -TPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 344 LGEI 347
L +I
Sbjct: 131 LWDI 134
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 269 (99.8 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 63/227 (27%), Positives = 108/227 (47%)
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177
A+P T AW +++++ H S V+S + L+ +G DD LW + +
Sbjct: 2 ATPVVTKTAW------KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC 55
Query: 178 IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236
I + + +V + + I G ++VWDL ++ TL GH+ I + P
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGS 295
G ++ + D + +WD+R + CV GH ++C +SPDG + + +
Sbjct: 116 YGEFVASGSQDTNIKLWDIR----RKGCVFRYRGHSQ-----AVRCLRFSPDGKWLASAA 166
Query: 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
D V +WD T+ +++ + PGHTG VN FH E ++ S SSD+ I
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 248 (92.4 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 69/257 (26%), Positives = 120/257 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ A G ++A+G D + LW ++ +C M L GH + + + T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNT 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + + FS + + D+ VK+WDL G++ GH +
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 230 TGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ P+ YLL +G D + WD+ + + V +EG L ++PDG
Sbjct: 193 NVVEFHPN-EYLLASGSSDRTIRFWDLEKF----QVVSCIEGEPGPVRSVL----FNPDG 243
Query: 289 SKVTAGSSDRM-VYIWD 304
+ +G D + VY W+
Sbjct: 244 CCLYSGCQDSLRVYGWE 260
Score = 206 (77.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 55/236 (23%), Positives = 105/236 (44%)
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDDGTAKL 169
G + + D + W + I + H S V S R P L+V+GS G+ ++
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV---RLNTPEELIVAGSQSGSIRV 89
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ ++T K I ++ F + + +G D ++K+WD+R+ +GH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + SPDG +L + D + +WD+ + + GH N+++ + P+
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPGHTGPV--NVVE--FHPNE 201
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS-CSSDKQIY 343
+ +GSSDR + WD +++ + G G V +F+ + S C ++Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 201 (75.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 56/209 (26%), Positives = 99/209 (47%)
Query: 12 NALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKF 65
N + +++ +V + P+ A +G R LE+ +L T GH++ + ++ F
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G +ASGS D +I LW + F +GH A+ L ++ DG + SA+ D T++
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DK 184
WD+ GK + + H VN L+ SGS D T + WD+ + + +
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 185 YQITAVSFSDASDKIYTGGIDN-DVKVWD 212
+ +V F+ +Y+G D+ V W+
Sbjct: 232 GPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++++ AS ++ TGG D V +W + K M+L GH + + L+ ++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ +WD+ + ++ L GH+ N+ + P G V +GS D + +WD
Sbjct: 83 QSGSIRVWDLEAA----KILRTLMGHK----ANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +++ GH+ +V F + S + D + L ++
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 225 HQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H ++ + L G L T G DC++ +W + P C+ L GH E L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINK--PN--CIMSLTGHTSPVESVRLN-- 72
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+P+ + AGS + +WD + +IL L GH ++ FH + S S D I
Sbjct: 73 -TPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 344 LGEI 347
L +I
Sbjct: 131 LWDI 134
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 269 (99.8 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 63/227 (27%), Positives = 108/227 (47%)
Query: 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177
A+P T AW +++++ H S V+S + L+ +G DD LW + +
Sbjct: 2 ATPVVTKTAW------KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC 55
Query: 178 IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236
I + + +V + + I G ++VWDL ++ TL GH+ I + P
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGS 295
G ++ + D + +WD+R + CV GH ++C +SPDG + + +
Sbjct: 116 YGEFVASGSQDTNIKLWDIR----RKGCVFRYRGHSQ-----AVRCLRFSPDGKWLASAA 166
Query: 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
D V +WD T+ +++ + PGHTG VN FH E ++ S SSD+ I
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 249 (92.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 69/257 (26%), Positives = 123/257 (47%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ A G ++A+G D + LW ++ +C M L GH + + + T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNT 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + + FS + + D+ VK+WDL G++ GH +
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 230 TGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ P+ YLL +G D + WD+ + + V +EG +++L ++PDG
Sbjct: 193 NVVEFHPN-EYLLASGSSDRTIRFWDLEKF----QVVSCIEGEPGPV-RSIL---FNPDG 243
Query: 289 SKVTAGSSDRM-VYIWD 304
+ +G D + VY W+
Sbjct: 244 CCLYSGCQDSLRVYGWE 260
Score = 206 (77.6 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 55/236 (23%), Positives = 105/236 (44%)
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDDGTAKL 169
G + + D + W + I + H S V S R P L+V+GS G+ ++
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV---RLNTPEELIVAGSQSGSIRV 89
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ ++T K I ++ F + + +G D ++K+WD+R+ +GH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + SPDG +L + D + +WD+ + + GH N+++ + P+
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPGHTGPV--NVVE--FHPNE 201
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS-CSSDKQIY 343
+ +GSSDR + WD +++ + G G V +F+ + S C ++Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVY 257
Score = 200 (75.5 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 55/209 (26%), Positives = 99/209 (47%)
Query: 12 NALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKF 65
N + +++ +V + P+ A +G R LE+ +L T GH++ + ++ F
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G +ASGS D +I LW + F +GH A+ L ++ DG + SA+ D T++
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DK 184
WD+ GK + + H VN L+ SGS D T + WD+ + + +
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 185 YQITAVSFSDASDKIYTGGIDN-DVKVWD 212
+ ++ F+ +Y+G D+ V W+
Sbjct: 232 GPVRSILFNPDGCCLYSGCQDSLRVYGWE 260
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++++ AS ++ TGG D V +W + K M+L GH + + L+ ++
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ +WD+ + ++ L GH+ N+ + P G V +GS D + +WD
Sbjct: 83 QSGSIRVWDLEAA----KILRTLMGHK----ANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +++ GH+ +V F + S + D + L ++
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 225 HQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H ++ + L G L T G DC++ +W + P C+ L GH E L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINK--PN--CIMSLTGHTSPVESVRLN-- 72
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+P+ + AGS + +WD + +IL L GH ++ FH + S S D I
Sbjct: 73 -TPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 344 LGEI 347
L +I
Sbjct: 131 LWDI 134
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 266 (98.7 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 68/221 (30%), Positives = 104/221 (47%)
Query: 38 NGKQRTSSLES--PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G + SL+S PI + GH V + ++P+G + + +D LW + + +
Sbjct: 287 DGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQ-EEILH 345
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
+GH + DLH+ DGS + D R WD+ TG+ + + H + S S G
Sbjct: 346 QEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGF 405
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIY--TGGIDNDVKVWD 212
V +GS D K+WD+RQR I T P +++V F +D Y TG DN K+W
Sbjct: 406 H-VATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQP-NDGHYLLTGAYDNTAKIWT 463
Query: 213 LRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
TL GH+ + G+ LSPDG + T D +W
Sbjct: 464 HPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 262 (97.3 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 76/265 (28%), Positives = 122/265 (46%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
I L GH + V + F+P T+ +AS + D + LW + D + ++GH
Sbjct: 251 IRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSD-EPIADIEGHSM 309
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
+ + W G + + D + R WD+E ++I H+ V+ G L +G
Sbjct: 310 RVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGS-LAGTG 368
Query: 162 SDDGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS 219
D A++WD+R G F + + +I +++FS + TG DN KVWDLR+
Sbjct: 369 GLDSFARVWDLRT-GRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCI 427
Query: 220 MTLQGHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278
T+ HQ++++ + P DG YLLT D IW ++P +K L GH E
Sbjct: 428 YTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSP----LKTLAGH----EGK 479
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIW 303
++ SPDG + S DR +W
Sbjct: 480 VMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 227 (85.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 79/303 (26%), Positives = 127/303 (41%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLH----W 108
G + +F+P ++ + S LW V DC L+GH + + H
Sbjct: 214 GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVP-DCTLIRTLRGHNTNVGAISFHPQATL 272
Query: 109 TTDGSQIISAS--PDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDD 164
T + S + AS D +++ W +++ + I + H+ V PS R + + D
Sbjct: 273 TLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGR---FLGTTCYD 329
Query: 165 GTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
+ +LWD+ Q + + + F TGG+D+ +VWDLR G M L+
Sbjct: 330 HSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLE 389
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC- 282
GH I ++ SP+G ++ T D +WD+R Q RC+ + HQ NL+
Sbjct: 390 GHIKEIYSINFSPNGFHVATGSGDNACKVWDLR----QRRCIYTIPAHQ-----NLVSSV 440
Query: 283 GWSP-DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQ 341
+ P DG + G+ D IW L L GH G V +I +CS D+
Sbjct: 441 KFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRT 500
Query: 342 IYL 344
L
Sbjct: 501 FKL 503
Score = 220 (82.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 64/248 (25%), Positives = 103/248 (41%)
Query: 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPS 151
NF G I ++ + +++AS + W V I+ + HN+ V +
Sbjct: 208 NFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFH 267
Query: 152 RRGPPLVVSGSD--------DGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTG 202
+ L + SD DG+ KLW + I ++ V++ + + T
Sbjct: 268 PQAT-LTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTT 326
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D+ ++WDL E + +GH + + PDGS T G+D +WD+R
Sbjct: 327 CYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRT----G 382
Query: 263 RCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN 322
RCV LEGH K + +SP+G V GS D +WD RR +Y +P H V+
Sbjct: 383 RCVMFLEGHI----KEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVS 438
Query: 323 ESVFHATE 330
F +
Sbjct: 439 SVKFQPND 446
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 261 (96.9 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 85/337 (25%), Positives = 153/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +V+ S S D I +W GD
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS + D T K+W+++ ++TF + + V + I + D V+
Sbjct: 201 MPNGDH-IVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSY--------------------LLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ SY LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + G + + + D+ + +WD ++R
Sbjct: 320 IKMWDVST----GMCLMTLVGHD-NWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH T P + + S D+ + + E
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 42/113 (37%), Positives = 59/113 (52%)
Query: 62 TMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASP 120
T K G + SGS D+ I +W V G C M L GH N + + + + G I+S +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 121 DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
DKTLR WD + + +K + H FV S + P VV+GS D T K+W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSL-DFHKTAPYVVTGSVDQTVKVWECR 410
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F I + D ++VWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 261 (96.9 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 85/337 (25%), Positives = 152/337 (45%)
Query: 36 GPNGKQRTSS--LESPI--MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC 90
GP G++R + P L+GH+S V + F+P +++ S S D I +W GD
Sbjct: 83 GPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDF 142
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150
+ LKGH +++ D+ + G + S S D T++ WD + + I+ M H+ V+S
Sbjct: 143 ER--TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
G +VS S D T K+W++ ++TF + + V + + + D V+
Sbjct: 201 MPNGDH-IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVR 259
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPD--------------------GSYLLTNGMDCK 249
VW + E L+ H+ ++ +S +P+ G +LL+ D
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKT 319
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +WD+ C+ L GH N+ + +L + P G V + + D+ + IWD ++R
Sbjct: 320 IKMWDIST----GMCLMTLVGHD-NWVRGVL---FHPGGRFVVSCADDKTLRIWDYKNKR 371
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L H V FH P + + S D+ + + E
Sbjct: 372 CMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 64 KFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK 122
K G + SGS D+ I +W + G C M L GH N + + + G ++S + DK
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMC--LMTLVGHDNWVRGVLFHPGGRFVVSCADDK 360
Query: 123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
TLR WD + + +K ++ H FV S + P VV+GS D T K+W+ R
Sbjct: 361 TLRIWDYKNKRCMKTLSAHEHFVTSL-DFHKASPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
P ++SGS D T K+WD+ + T D + + V F + + D +++WD
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+ TL H+ +T + Y++T +D + +W+ R
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 266 (98.7 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 73/264 (27%), Positives = 126/264 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V++ + +I SGS DR + +W+ G+C + L GH + + +H
Sbjct: 297 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIH--TLYGHTSTVRCMH--LH 350
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+++S S D TLR WD+ETG+ + + H + V C G VVSG+ D K+WD
Sbjct: 351 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRR-VVSGAYDFMVKVWD 407
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ T ++ ++ F + +G +D ++VWD+ G TL GHQ + +
Sbjct: 408 PETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 465
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
GM L + L++ D + IWD++ +C++ L+G N ++ + C
Sbjct: 466 GMELKDN--ILVSGNADSTVKIWDIKT----GQCLQTLQGP--NKHQSAVTCLQFNKNFV 517
Query: 291 VTAGSSDRMVYIWDTTSRRILYKL 314
+T+ S D V +WD + + L
Sbjct: 518 ITS-SDDGTVKLWDLKTGEFIRNL 540
Score = 248 (92.4 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 74/236 (31%), Positives = 110/236 (46%)
Query: 42 RTSSLESPIMLLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGH 99
R L+SP +L GH V T ++F G I SGS D + +W V G C +V GH
Sbjct: 246 RRGELKSP-KVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GH 300
Query: 100 KNAILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
+ W++ + IIS S D+TL+ W+ ETG+ I + H S V C
Sbjct: 301 TGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KR 353
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
VVSGS D T ++WD+ + + V + ++ +G D VKVWD
Sbjct: 354 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETE 411
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
TLQGH + + SL DG ++++ +D + +WD+ C+ L GHQ
Sbjct: 412 TCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ 461
Score = 233 (87.1 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 69/262 (26%), Positives = 118/262 (45%)
Query: 84 WHVHGDCKNFMVLKGHKNAILD-LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
W G+ K+ VLKGH + ++ L + G++I+S S D TL+ W TGK ++ + H
Sbjct: 245 WR-RGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 301
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG 202
V S S+ +++SGS D T K+W+ I T + T ++ +G
Sbjct: 302 GGVWS---SQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHEKRVVSG 357
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D ++VWD+ G+ L GH + + DG +++ D + +WD P+
Sbjct: 358 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD-----PET 410
Query: 263 R-CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C+ L+GH + L+ DG V +GS D + +WD + ++ L GH
Sbjct: 411 ETCLHTLQGHTNRVYS--LQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 464
Query: 322 NESVFHATEPVIGSCSSDKQIY 343
+ V G+ S +I+
Sbjct: 465 SGMELKDNILVSGNADSTVKIW 486
Score = 217 (81.4 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 61/203 (30%), Positives = 93/203 (45%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
IIS S D+TL+ W+ ETG+ I + H S V C VVSGS D T ++WD+
Sbjct: 314 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KRVVSGSRDATLRVWDIET 370
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + V + ++ +G D VKVWD TLQGH + + S
Sbjct: 371 GQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTNRV--YS 426
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
L DG ++++ +D + +WD+ C+ L GHQ L G + + +
Sbjct: 427 LQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQS------LTSGMELKDNILVS 476
Query: 294 GSSDRMVYIWDTTSRRILYKLPG 316
G++D V IWD + + L L G
Sbjct: 477 GNADSTVKIWDIKTGQCLQTLQG 499
Score = 170 (64.9 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 41/131 (31%), Positives = 74/131 (56%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E+ + L GH + VY+++F+ G + SGS D I +W V G+C + L GH++
Sbjct: 411 ETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIH--TLTGHQSLTSG 466
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA---EHNSFVNSCCPSRRGPPLVVSGS 162
+ + ++S + D T++ WD++TG+ ++ + +H S V +C + V++ S
Sbjct: 467 ME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV-TCLQFNKN--FVITSS 521
Query: 163 DDGTAKLWDMR 173
DDGT KLWD++
Sbjct: 522 DDGTVKLWDLK 532
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 266 (98.7 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 73/264 (27%), Positives = 126/264 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V++ + +I SGS DR + +W+ G+C + L GH + + +H
Sbjct: 337 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIH--TLYGHTSTVRCMH--LH 390
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+++S S D TLR WD+ETG+ + + H + V C G VVSG+ D K+WD
Sbjct: 391 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRR-VVSGAYDFMVKVWD 447
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ T ++ ++ F + +G +D ++VWD+ G TL GHQ + +
Sbjct: 448 PETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 505
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
GM L + L++ D + IWD++ +C++ L+G N ++ + C
Sbjct: 506 GMELKDN--ILVSGNADSTVKIWDIKT----GQCLQTLQGP--NKHQSAVTCLQFNKNFV 557
Query: 291 VTAGSSDRMVYIWDTTSRRILYKL 314
+T+ S D V +WD + + L
Sbjct: 558 ITS-SDDGTVKLWDLKTGEFIRNL 580
Score = 248 (92.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 74/236 (31%), Positives = 110/236 (46%)
Query: 42 RTSSLESPIMLLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGH 99
R L+SP +L GH V T ++F G I SGS D + +W V G C +V GH
Sbjct: 286 RRGELKSP-KVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GH 340
Query: 100 KNAILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
+ W++ + IIS S D+TL+ W+ ETG+ I + H S V C
Sbjct: 341 TGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KR 393
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
VVSGS D T ++WD+ + + V + ++ +G D VKVWD
Sbjct: 394 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETE 451
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
TLQGH + + SL DG ++++ +D + +WD+ C+ L GHQ
Sbjct: 452 TCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ 501
Score = 233 (87.1 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 69/262 (26%), Positives = 118/262 (45%)
Query: 84 WHVHGDCKNFMVLKGHKNAILD-LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
W G+ K+ VLKGH + ++ L + G++I+S S D TL+ W TGK ++ + H
Sbjct: 285 WR-RGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 341
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG 202
V S S+ +++SGS D T K+W+ I T + T ++ +G
Sbjct: 342 GGVWS---SQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHEKRVVSG 397
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D ++VWD+ G+ L GH + + DG +++ D + +WD P+
Sbjct: 398 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD-----PET 450
Query: 263 R-CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C+ L+GH + L+ DG V +GS D + +WD + ++ L GH
Sbjct: 451 ETCLHTLQGHTNRVYS--LQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 504
Query: 322 NESVFHATEPVIGSCSSDKQIY 343
+ V G+ S +I+
Sbjct: 505 SGMELKDNILVSGNADSTVKIW 526
Score = 217 (81.4 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 61/203 (30%), Positives = 93/203 (45%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
IIS S D+TL+ W+ ETG+ I + H S V C VVSGS D T ++WD+
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KRVVSGSRDATLRVWDIET 410
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + V + ++ +G D VKVWD TLQGH + + S
Sbjct: 411 GQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTNRV--YS 466
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
L DG ++++ +D + +WD+ C+ L GHQ L G + + +
Sbjct: 467 LQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQS------LTSGMELKDNILVS 516
Query: 294 GSSDRMVYIWDTTSRRILYKLPG 316
G++D V IWD + + L L G
Sbjct: 517 GNADSTVKIWDIKTGQCLQTLQG 539
Score = 170 (64.9 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 41/131 (31%), Positives = 74/131 (56%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E+ + L GH + VY+++F+ G + SGS D I +W V G+C + L GH++
Sbjct: 451 ETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIH--TLTGHQSLTSG 506
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA---EHNSFVNSCCPSRRGPPLVVSGS 162
+ + ++S + D T++ WD++TG+ ++ + +H S V +C + V++ S
Sbjct: 507 ME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV-TCLQFNKN--FVITSS 561
Query: 163 DDGTAKLWDMR 173
DDGT KLWD++
Sbjct: 562 DDGTVKLWDLK 572
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 265 (98.3 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 77/281 (27%), Positives = 133/281 (47%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDR----DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
H S V ++F+ G +A+G + D+ L ++ V K I + ++ D
Sbjct: 268 HDSVVCCVRFSRDGKYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPD 327
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKM-AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
G + + + DK +R WD+ T + IK + + H + S + G + SGS D T +LW
Sbjct: 328 GKYLATGAEDKQIRVWDIAT-RTIKHIFSGHEQDIYSLDFAGNGR-YIASGSGDKTVRLW 385
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ---GHQD 227
D+ + + T + +T V+ S + G +D V+VWD G + L+ GH+D
Sbjct: 386 DIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKD 445
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMR-PYAPQN------RCVKILEGHQHNFEKNLL 280
+ ++ +P+G L++ +D + +W++ P N +C + EGH+ +F +L
Sbjct: 446 SVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHK-DF---VL 501
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+PDG V +GS DR V WD + L GH SV
Sbjct: 502 SVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSV 542
Score = 261 (96.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 68/254 (26%), Positives = 122/254 (48%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTL 124
F+P G +A+G+ D+ I +W + + GH+ I L + +G I S S DKT+
Sbjct: 324 FSPDGKYLATGAEDKQIRVWDIATRTIKH-IFSGHEQDIYSLDFAGNGRYIASGSGDKTV 382
Query: 125 RAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--P 182
R WD+ GK + ++ + V + S G V +GS D T ++WD ++ P
Sbjct: 383 RLWDIAEGKLVYTLSIEDG-VTTVAMSPDGL-YVAAGSLDKTVRVWDTTTGYLVERLENP 440
Query: 183 D--KYQITAVSFSDASDKIYTGGIDNDVKVWDL-----------RKGEVSMTLQGHQDMI 229
D K + +V+F+ ++ +G +D +K+W+L + G+ T +GH+D +
Sbjct: 441 DGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFV 500
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289
+ L+PDG ++++ D + WD P +L+GH+++ ++ SP G+
Sbjct: 501 LSVCLTPDGHWVMSGSKDRGVQFWD--PIT--GNAQMMLQGHKNS----VISVAPSPTGN 552
Query: 290 KVTAGSSDRMVYIW 303
GS D IW
Sbjct: 553 LFATGSGDMRARIW 566
Score = 232 (86.7 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 66/222 (29%), Positives = 106/222 (47%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+ +GH+ +Y++ F G IASGS D+ + LW + + K L ++ + + + D
Sbjct: 353 IFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDI-AEGKLVYTLS-IEDGVTTVAMSPD 410
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAE---HNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
G + + S DKT+R WD TG ++++ H V S + G LV SGS D T K
Sbjct: 411 GLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELV-SGSLDKTIK 469
Query: 169 LWDM---RQR-------GAI-QTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
LW++ RQ+ G +TF K + +V + + +G D V+ WD G
Sbjct: 470 LWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITG 529
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
M LQGH++ + ++ SP G+ T D + IW Y
Sbjct: 530 NAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYSAY 571
Score = 199 (75.1 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 54/245 (22%), Positives = 118/245 (48%)
Query: 99 HKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS------FVNSCCPSR 152
H + + + ++ DG + + +++ + +DV G+ + + + + ++ S C S
Sbjct: 268 HDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 153 RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVW 211
G L +G++D ++WD+ R F Q I ++ F+ I +G D V++W
Sbjct: 327 DGKYLA-TGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLW 385
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
D+ +G++ TL +D +T +++SPDG Y+ +D + +WD R ++ +GH
Sbjct: 386 DIAEGKLVYTLS-IEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVER-LENPDGH 443
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ + + ++P+G ++ +GS D+ + +W+ R Y G G + + +
Sbjct: 444 KDS----VYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDF 499
Query: 332 VIGSC 336
V+ C
Sbjct: 500 VLSVC 504
Score = 179 (68.1 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 64/220 (29%), Positives = 101/220 (45%)
Query: 141 HNSFVNSCCP--SRRGPPLVVSGSDDGTAKLWDMR--------QRGAIQTFPDKYQITAV 190
H+S V CC SR G L +G + +A+++D+ Q ++ D Y I +V
Sbjct: 268 HDSVV--CCVRFSRDGKYLA-TGCNR-SAQIFDVTLGQNVAVLQDESVDKSGDLY-IRSV 322
Query: 191 SFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKL 250
FS + TG D ++VWD+ + GH+ I + + +G Y+ + D +
Sbjct: 323 CFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTV 382
Query: 251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 310
+WD+ + + V L + E + SPDG V AGS D+ V +WDTT+ +
Sbjct: 383 RLWDIA----EGKLVYTL-----SIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYL 433
Query: 311 LYKL--P-GHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +L P GH SV F + S S DK I L E+
Sbjct: 434 VERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWEL 473
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/182 (23%), Positives = 81/182 (44%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK-----GHKN 101
E ++ + V T+ +P G +A+GS D+ + +W ++V + GHK+
Sbjct: 389 EGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDT---TTGYLVERLENPDGHKD 445
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVET-----------GKQIKKMAEHNSFVNSCCP 150
++ + + +G +++S S DKT++ W++ GK + H FV S C
Sbjct: 446 SVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCL 505
Query: 151 SRRGPPLVVSGSDDGTAKLWD-MRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVK 209
+ G V+SGS D + WD + + K + +V+ S + TG D +
Sbjct: 506 TPDGH-WVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRAR 564
Query: 210 VW 211
+W
Sbjct: 565 IW 566
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 263 (97.6 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 81/304 (26%), Positives = 136/304 (44%)
Query: 53 LTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKN---FMVLKGHKNAILDLHW 108
+ GH A+ F+P + + + SGS D +W DC LKGH + +L + +
Sbjct: 144 IAGHGEAILATSFSPVSSSTMVSGSGDSTARIW----DCDTGTPLHTLKGHTSWVLAVSY 199
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--P---SRRGPPLVVSGS 162
+ +G+ I + S D T+R WD + G+ + + H ++ S P + G P + S S
Sbjct: 200 SPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASAS 259
Query: 163 DDGTAKLWDM-RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
D T ++WD+ +R I K +T V + + KIYT D +KVW+ + G + T
Sbjct: 260 KDSTVRIWDVISKRADIVLSGHKGSVTCVRWG-GTGKIYTSSHDRTIKVWNSQTGTLIQT 318
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
L H + ++LS D ++L + D P++ K+ + FEK
Sbjct: 319 LSAHAHRVNHLALSTD--FIL------RTAYHDHTGKVPESDADKVAMAKKR-FEKAATI 369
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDT-TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
+ K+ + S D +Y+WD +S + + +L GH VN F I S D
Sbjct: 370 NNKIVE--KLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDN 427
Query: 341 QIYL 344
+ L
Sbjct: 428 HVKL 431
Score = 240 (89.5 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 71/257 (27%), Positives = 120/257 (46%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
++L+GH+ +V +++ G + S SHDR I +W+ L H + + L +T
Sbjct: 276 IVLSGHKGSVTCVRWGGTGKIYTS-SHDRTIKVWNSQTGTL-IQTLSAHAHRVNHLALST 333
Query: 111 DGSQIISASPDKTLRAWDVETGK--QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
D + +A D T + + + K KK E + +N+ + +VS SDD T
Sbjct: 334 DFI-LRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEK-----LVSASDDFTMY 387
Query: 169 LWDMRQ--RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
LWD + + + ++ V+FS I + G DN VK+W+ R G+ TL+GH
Sbjct: 388 LWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHV 447
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ S D L+++ D L +W++R + + L GH+ + WSP
Sbjct: 448 GAVYQCCFSADSRLLVSSSKDTTLKVWNVRT----GKLSEDLPGHKDE----VFAVDWSP 499
Query: 287 DGSKVTAGSSDRMVYIW 303
DG KV +G D+ + IW
Sbjct: 500 DGQKVGSGGKDKAIRIW 516
Score = 222 (83.2 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 79/300 (26%), Positives = 134/300 (44%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLH 107
+P+ L GH S V + ++P G +IA+GS D + +W LKGH I L
Sbjct: 182 TPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLA 241
Query: 108 WTT-----DGS-QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
W G ++ SAS D T+R WDV + + ++ H V C G + +
Sbjct: 242 WEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVT--CVRWGGTGKIYTS 299
Query: 162 SDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVS 219
S D T K+W+ + IQT +++ ++ S +D I T D+ KV + +V+
Sbjct: 300 SHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALS--TDFILRTAYHDHTGKVPESDADKVA 357
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
M + + T + + L++ D + +WD P + ++L GHQ K +
Sbjct: 358 MAKKRFEKAATINNKIVEK--LVSASDDFTMYLWD--PESSSKPVARLL-GHQ----KEV 408
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
+SPD + + + D V +W+ + + L GH G+V + F A ++ S S D
Sbjct: 409 NHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKD 468
Score = 218 (81.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 64/272 (23%), Positives = 123/272 (45%)
Query: 72 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131
+AS S D + +W V + +VL GHK ++ + W G +I ++S D+T++ W+ +T
Sbjct: 255 LASASKDSTVRIWDVISKRAD-IVLSGHKGSVTCVRWGGTG-KIYTSSHDRTIKVWNSQT 312
Query: 132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVS 191
G I+ ++ H VN S ++ + D T K+ + + +++ A
Sbjct: 313 GTLIQTLSAHAHRVNHLALSTDF--ILRTAYHDHTGKVPES-DADKVAMAKKRFEKAATI 369
Query: 192 FSDASDKIYTGGIDNDVKVWDLRKGEVSMT-LQGHQDMITGMSLSPDGSYLLTNGMDCKL 250
+ +K+ + D + +WD + L GHQ + ++ SPD +Y+ + G D +
Sbjct: 370 NNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHV 429
Query: 251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 310
+W+ R + + L GH + +C +S D + + S D + +W+ + ++
Sbjct: 430 KLWNGR----DGKFITTLRGHVGA----VYQCCFSADSRLLVSSSKDTTLKVWNVRTGKL 481
Query: 311 LYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
LPGH V + +GS DK I
Sbjct: 482 SEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAI 513
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 41/126 (32%), Positives = 60/126 (47%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
S P+ L GHQ V + F+P IAS D + LW+ D K L+GH A+
Sbjct: 393 SSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGR-DGKFITTLRGHVGAVY 451
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
++ D ++S+S D TL+ W+V TGK + + H V + S G V SG D
Sbjct: 452 QCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQK-VGSGGKD 510
Query: 165 GTAKLW 170
++W
Sbjct: 511 KAIRIW 516
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 266 (98.7 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 73/264 (27%), Positives = 126/264 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V++ + +I SGS DR + +W+ G+C + L GH + + +H
Sbjct: 417 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIH--TLYGHTSTVRCMH--LH 470
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+++S S D TLR WD+ETG+ + + H + V C G VVSG+ D K+WD
Sbjct: 471 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRR-VVSGAYDFMVKVWD 527
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ T ++ ++ F + +G +D ++VWD+ G TL GHQ + +
Sbjct: 528 PETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 585
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
GM L + L++ D + IWD++ +C++ L+G N ++ + C
Sbjct: 586 GMELKDN--ILVSGNADSTVKIWDIKT----GQCLQTLQGP--NKHQSAVTCLQFNKNFV 637
Query: 291 VTAGSSDRMVYIWDTTSRRILYKL 314
+T+ S D V +WD + + L
Sbjct: 638 ITS-SDDGTVKLWDLKTGEFIRNL 660
Score = 248 (92.4 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 74/236 (31%), Positives = 110/236 (46%)
Query: 42 RTSSLESPIMLLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGH 99
R L+SP +L GH V T ++F G I SGS D + +W V G C +V GH
Sbjct: 366 RRGELKSP-KVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GH 420
Query: 100 KNAILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
+ W++ + IIS S D+TL+ W+ ETG+ I + H S V C
Sbjct: 421 TGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KR 473
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
VVSGS D T ++WD+ + + V + ++ +G D VKVWD
Sbjct: 474 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETE 531
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
TLQGH + + SL DG ++++ +D + +WD+ C+ L GHQ
Sbjct: 532 TCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ 581
Score = 233 (87.1 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 69/262 (26%), Positives = 118/262 (45%)
Query: 84 WHVHGDCKNFMVLKGHKNAILD-LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
W G+ K+ VLKGH + ++ L + G++I+S S D TL+ W TGK ++ + H
Sbjct: 365 WR-RGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 421
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG 202
V S S+ +++SGS D T K+W+ I T + T ++ +G
Sbjct: 422 GGVWS---SQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHEKRVVSG 477
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D ++VWD+ G+ L GH + + DG +++ D + +WD P+
Sbjct: 478 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD-----PET 530
Query: 263 R-CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C+ L+GH + L+ DG V +GS D + +WD + ++ L GH
Sbjct: 531 ETCLHTLQGHTNRVYS--LQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 584
Query: 322 NESVFHATEPVIGSCSSDKQIY 343
+ V G+ S +I+
Sbjct: 585 SGMELKDNILVSGNADSTVKIW 606
Score = 217 (81.4 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 61/203 (30%), Positives = 93/203 (45%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
IIS S D+TL+ W+ ETG+ I + H S V C VVSGS D T ++WD+
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KRVVSGSRDATLRVWDIET 490
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + V + ++ +G D VKVWD TLQGH + + S
Sbjct: 491 GQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTNRV--YS 546
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
L DG ++++ +D + +WD+ C+ L GHQ L G + + +
Sbjct: 547 LQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQS------LTSGMELKDNILVS 596
Query: 294 GSSDRMVYIWDTTSRRILYKLPG 316
G++D V IWD + + L L G
Sbjct: 597 GNADSTVKIWDIKTGQCLQTLQG 619
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/131 (31%), Positives = 74/131 (56%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E+ + L GH + VY+++F+ G + SGS D I +W V G+C + L GH++
Sbjct: 531 ETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIH--TLTGHQSLTSG 586
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA---EHNSFVNSCCPSRRGPPLVVSGS 162
+ + ++S + D T++ WD++TG+ ++ + +H S V +C + V++ S
Sbjct: 587 ME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV-TCLQFNKN--FVITSS 641
Query: 163 DDGTAKLWDMR 173
DDGT KLWD++
Sbjct: 642 DDGTVKLWDLK 652
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 266 (98.7 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 73/264 (27%), Positives = 126/264 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V++ + +I SGS DR + +W+ G+C + L GH + + +H
Sbjct: 422 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIH--TLYGHTSTVRCMH--LH 475
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+++S S D TLR WD+ETG+ + + H + V C G VVSG+ D K+WD
Sbjct: 476 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRR-VVSGAYDFMVKVWD 532
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ T ++ ++ F + +G +D ++VWD+ G TL GHQ + +
Sbjct: 533 PETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 590
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
GM L + L++ D + IWD++ +C++ L+G N ++ + C
Sbjct: 591 GMELKDN--ILVSGNADSTVKIWDIKT----GQCLQTLQGP--NKHQSAVTCLQFNKNFV 642
Query: 291 VTAGSSDRMVYIWDTTSRRILYKL 314
+T+ S D V +WD + + L
Sbjct: 643 ITS-SDDGTVKLWDLKTGEFIRNL 665
Score = 248 (92.4 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 74/236 (31%), Positives = 110/236 (46%)
Query: 42 RTSSLESPIMLLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGH 99
R L+SP +L GH V T ++F G I SGS D + +W V G C +V GH
Sbjct: 371 RRGELKSP-KVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GH 425
Query: 100 KNAILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
+ W++ + IIS S D+TL+ W+ ETG+ I + H S V C
Sbjct: 426 TGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KR 478
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
VVSGS D T ++WD+ + + V + ++ +G D VKVWD
Sbjct: 479 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETE 536
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
TLQGH + + SL DG ++++ +D + +WD+ C+ L GHQ
Sbjct: 537 TCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ 586
Score = 233 (87.1 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 69/262 (26%), Positives = 118/262 (45%)
Query: 84 WHVHGDCKNFMVLKGHKNAILD-LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
W G+ K+ VLKGH + ++ L + G++I+S S D TL+ W TGK ++ + H
Sbjct: 370 WR-RGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 426
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG 202
V S S+ +++SGS D T K+W+ I T + T ++ +G
Sbjct: 427 GGVWS---SQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHEKRVVSG 482
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D ++VWD+ G+ L GH + + DG +++ D + +WD P+
Sbjct: 483 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD-----PET 535
Query: 263 R-CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C+ L+GH + L+ DG V +GS D + +WD + ++ L GH
Sbjct: 536 ETCLHTLQGHTNRVYS--LQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 589
Query: 322 NESVFHATEPVIGSCSSDKQIY 343
+ V G+ S +I+
Sbjct: 590 SGMELKDNILVSGNADSTVKIW 611
Score = 217 (81.4 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 61/203 (30%), Positives = 93/203 (45%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
IIS S D+TL+ W+ ETG+ I + H S V C VVSGS D T ++WD+
Sbjct: 439 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KRVVSGSRDATLRVWDIET 495
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + V + ++ +G D VKVWD TLQGH + + S
Sbjct: 496 GQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTNRV--YS 551
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
L DG ++++ +D + +WD+ C+ L GHQ L G + + +
Sbjct: 552 LQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQS------LTSGMELKDNILVS 601
Query: 294 GSSDRMVYIWDTTSRRILYKLPG 316
G++D V IWD + + L L G
Sbjct: 602 GNADSTVKIWDIKTGQCLQTLQG 624
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/131 (31%), Positives = 74/131 (56%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E+ + L GH + VY+++F+ G + SGS D I +W V G+C + L GH++
Sbjct: 536 ETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIH--TLTGHQSLTSG 591
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA---EHNSFVNSCCPSRRGPPLVVSGS 162
+ + ++S + D T++ WD++TG+ ++ + +H S V +C + V++ S
Sbjct: 592 ME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV-TCLQFNKN--FVITSS 646
Query: 163 DDGTAKLWDMR 173
DDGT KLWD++
Sbjct: 647 DDGTVKLWDLK 657
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 267 (99.0 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 55/210 (26%), Positives = 107/210 (50%)
Query: 134 QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSF 192
++++ H++ VN R+ ++V+G +D LW + + AI + + I +V+F
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF 67
Query: 193 SDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCI 252
+ + G +K+WDL + +V TL GH+ ++ P G + + +D L I
Sbjct: 68 DASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKI 127
Query: 253 WDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY 312
WD+R + C+ +GH N+L+ ++PDG + +G D +V +WD T+ ++L+
Sbjct: 128 WDIR----KKGCIHTYKGHTRGV--NVLR--FTPDGRWIVSGGEDNVVKVWDLTAGKLLH 179
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ H G + FH E ++ + S+DK +
Sbjct: 180 EFKSHEGKIQSLDFHPHEFLLATGSADKTV 209
Score = 242 (90.2 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 65/255 (25%), Positives = 113/255 (44%)
Query: 56 HQSAVYTMKFN-PAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
H +AV +K + V+ +G D + LW + G + L GH + I + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEGL 73
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP--PLVVSGSDDGTAKLWDM 172
+ + + T++ WD+E K ++ + H S +C P SGS D K+WD+
Sbjct: 74 VAAGAASGTIKLWDLEEAKVVRTLTGHRS---NCVSVNFHPFGEFFASGSLDTNLKIWDI 130
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R++G I T+ + + + F+ I +GG DN VKVWDL G++ + H+ I
Sbjct: 131 RKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQS 190
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSK 290
+ P L T D + WD+ + L G E ++C ++PDG
Sbjct: 191 LDFHPHEFLLATGSADKTVKFWDLETFE--------LIG-SGGTETTGVRCLTFNPDGKS 241
Query: 291 VTAGSSDRM-VYIWD 304
V G + + ++ W+
Sbjct: 242 VLCGLQESLKIFSWE 256
Score = 185 (70.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
I+ L GH S + ++ F+ + ++A+G+ I LW + + K L GH++ + +++
Sbjct: 52 ILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLE-EAKVVRTLTGHRSNCVSVNFH 110
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
G S S D L+ WD+ I H VN + G +VSG +D K+
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR-WIVSGGEDNVVKV 169
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ + F + +I ++ F + TG D VK WDL E+ +
Sbjct: 170 WDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTG 229
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRP 257
+ ++ +PDG +L G+ L I+ P
Sbjct: 230 VRCLTFNPDGKSVLC-GLQESLKIFSWEP 257
Score = 44 (20.5 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPG 316
T+GS + D +S+ IL KLPG
Sbjct: 318 TSGSGRDQAGLNDNSSKVILGKLPG 342
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 66/211 (31%), Positives = 103/211 (48%)
Query: 53 LTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDCKN-FMV----LKGHKNAILDL 106
L GH V ++ PA ++ SGS D+ + W + G N + + KGH + + D+
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+ DG+ +SAS D+TLR WD+ETG+ ++ H V S ++ +VS S D T
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQ-IVSASRDKT 131
Query: 167 AKLWDM--RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG 224
K+W+ + D +S SD S + + D VK WDL V+ G
Sbjct: 132 VKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIG 191
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255
H I+ ++LSPDGS + G D + +WD+
Sbjct: 192 HTGYISCITLSPDGSLCASAGKDGVIILWDL 222
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 63/253 (24%), Positives = 110/253 (43%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGS 113
GH V + + G S S DR + LW + G+ V GHK +L + +
Sbjct: 64 GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFV--GHKGDVLSVSIAKNLR 121
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWD 171
QI+SAS DKT++ W+ G+ + + HN +V++ PS + V+S S D T K WD
Sbjct: 122 QIVSASRDKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQSST-VISASWDKTVKSWD 179
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ F I+ ++ S + G D + +WDL K + TL+ + +
Sbjct: 180 LADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VH 238
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
++ SP+ Y L + I+ ++ + + + + WS DG
Sbjct: 239 ALAFSPN-RYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQN 297
Query: 291 VTAGSSDRMVYIW 303
+ AG +D ++ +W
Sbjct: 298 LFAGYTDNVIRVW 310
Score = 195 (73.7 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 65/230 (28%), Positives = 97/230 (42%)
Query: 96 LKGHKNAILDLHWT-TDGSQIISASPDKTLRAW------DVETGKQIKKMAEHNSFVNSC 148
L+GH + L T ++S S DKTL W D + G K H+ V
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 149 CPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDND 207
S G +S S D T +LWD+ Q F K + +VS + +I + D
Sbjct: 73 TISADGA-YALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKT 131
Query: 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPD--GSYLLTNGMDCKLCIWDMRPYAPQNRCV 265
VKVW+ GE TL GH D ++ + +SP S +++ D + WD+ Y+ +
Sbjct: 132 VKVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFI 190
Query: 266 KILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
GH + C SPDGS + D ++ +WD + LY L
Sbjct: 191 ----GHT-----GYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTL 231
Score = 158 (60.7 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 53/215 (24%), Positives = 89/215 (41%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDG 112
GH+ V ++ I S S D+ + +W+ G+C L GH + + + + +
Sbjct: 106 GHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGEC--MATLTGHNDWVSAVRISPSDQS 163
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
S +ISAS DKT+++WD+ H ++ SC L S DG LWD+
Sbjct: 164 STVISASWDKTVKSWDLADYSVNADFIGHTGYI-SCITLSPDGSLCASAGKDGVIILWDL 222
Query: 173 RQRGAIQTFPDKYQITAVSFSDASDKIY---TGGID----NDVKVWDLRKGEVSMTLQGH 225
+ + T K ++ A++FS + T GI + + D K E ++
Sbjct: 223 NKNKTLYTLEAKAEVHALAFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAK 282
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWD-MRPYA 259
++ S DG L D + +W M P A
Sbjct: 283 DPEAISLAWSADGQNLFAGYTDNVIRVWQVMTPSA 317
Score = 142 (55.0 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 50/214 (23%), Positives = 87/214 (40%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-----RQRGAIQ-TFPDKYQITA-VSFS 193
HN +V S + P L++SGS D T W + Q G + +F I V+ S
Sbjct: 16 HNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTIS 75
Query: 194 DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
+ D +++WDL GE + GH+ + +S++ + +++ D + +W
Sbjct: 76 ADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVW 135
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313
+ C+ L GH N + ++ S S V + S D+ V WD +
Sbjct: 136 NTI-----GECMATLTGH--NDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNAD 188
Query: 314 LPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG ++ + S D I L ++
Sbjct: 189 FIGHTGYISCITLSPDGSLCASAGKDGVIILWDL 222
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 66/211 (31%), Positives = 103/211 (48%)
Query: 53 LTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDCKN-FMV----LKGHKNAILDL 106
L GH V ++ PA ++ SGS D+ + W + G N + + KGH + + D+
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+ DG+ +SAS D+TLR WD+ETG+ ++ H V S ++ +VS S D T
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQ-IVSASRDKT 131
Query: 167 AKLWDM--RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG 224
K+W+ + D +S SD S + + D VK WDL V+ G
Sbjct: 132 VKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIG 191
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255
H I+ ++LSPDGS + G D + +WD+
Sbjct: 192 HTGYISCITLSPDGSLCASAGKDGVIILWDL 222
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 63/253 (24%), Positives = 110/253 (43%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGS 113
GH V + + G S S DR + LW + G+ V GHK +L + +
Sbjct: 64 GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFV--GHKGDVLSVSIAKNLR 121
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWD 171
QI+SAS DKT++ W+ G+ + + HN +V++ PS + V+S S D T K WD
Sbjct: 122 QIVSASRDKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQSST-VISASWDKTVKSWD 179
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ F I+ ++ S + G D + +WDL K + TL+ + +
Sbjct: 180 LADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VH 238
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
++ SP+ Y L + I+ ++ + + + + WS DG
Sbjct: 239 ALAFSPN-RYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQN 297
Query: 291 VTAGSSDRMVYIW 303
+ AG +D ++ +W
Sbjct: 298 LFAGYTDNVIRVW 310
Score = 195 (73.7 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 65/230 (28%), Positives = 97/230 (42%)
Query: 96 LKGHKNAILDLHWT-TDGSQIISASPDKTLRAW------DVETGKQIKKMAEHNSFVNSC 148
L+GH + L T ++S S DKTL W D + G K H+ V
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 149 CPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDND 207
S G +S S D T +LWD+ Q F K + +VS + +I + D
Sbjct: 73 TISADGA-YALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKT 131
Query: 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPD--GSYLLTNGMDCKLCIWDMRPYAPQNRCV 265
VKVW+ GE TL GH D ++ + +SP S +++ D + WD+ Y+ +
Sbjct: 132 VKVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFI 190
Query: 266 KILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
GH + C SPDGS + D ++ +WD + LY L
Sbjct: 191 ----GHT-----GYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTL 231
Score = 158 (60.7 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 53/215 (24%), Positives = 89/215 (41%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDG 112
GH+ V ++ I S S D+ + +W+ G+C L GH + + + + +
Sbjct: 106 GHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGEC--MATLTGHNDWVSAVRISPSDQS 163
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
S +ISAS DKT+++WD+ H ++ SC L S DG LWD+
Sbjct: 164 STVISASWDKTVKSWDLADYSVNADFIGHTGYI-SCITLSPDGSLCASAGKDGVIILWDL 222
Query: 173 RQRGAIQTFPDKYQITAVSFSDASDKIY---TGGID----NDVKVWDLRKGEVSMTLQGH 225
+ + T K ++ A++FS + T GI + + D K E ++
Sbjct: 223 NKNKTLYTLEAKAEVHALAFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAK 282
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWD-MRPYA 259
++ S DG L D + +W M P A
Sbjct: 283 DPEAISLAWSADGQNLFAGYTDNVIRVWQVMTPSA 317
Score = 142 (55.0 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 50/214 (23%), Positives = 87/214 (40%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-----RQRGAIQ-TFPDKYQITA-VSFS 193
HN +V S + P L++SGS D T W + Q G + +F I V+ S
Sbjct: 16 HNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTIS 75
Query: 194 DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
+ D +++WDL GE + GH+ + +S++ + +++ D + +W
Sbjct: 76 ADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVW 135
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313
+ C+ L GH N + ++ S S V + S D+ V WD +
Sbjct: 136 NTI-----GECMATLTGH--NDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNAD 188
Query: 314 LPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG ++ + S D I L ++
Sbjct: 189 FIGHTGYISCITLSPDGSLCASAGKDGVIILWDL 222
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 263 (97.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 69/259 (26%), Positives = 118/259 (45%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
I +L H+ + F+P +A+ S DR LW G +GH + + + +
Sbjct: 291 IAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTL--LQTFEGHLDRLARVAFH 348
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
G + + S DKT R WD+ TG ++ H+ V + G L S D A++
Sbjct: 349 PSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGA-LAASCGLDSLARV 407
Query: 170 WDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+R +I F + + +V+FS + +GG DN ++WDLR + + H ++
Sbjct: 408 WDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Query: 229 ITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
++ + P +G +L T D K+ IW R ++ VK L GH E + + D
Sbjct: 468 VSQVKYEPQEGYFLATASYDMKVNIWSGRDFS----LVKSLAGH----ESKVASLDITAD 519
Query: 288 GSKVTAGSSDRMVYIWDTT 306
S + S DR + +W ++
Sbjct: 520 SSCIATVSHDRTIKLWTSS 538
Score = 211 (79.3 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 72/284 (25%), Positives = 121/284 (42%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTL 124
F+ G ++A+ S LW + VLK HK D+ ++ + +AS D+T
Sbjct: 263 FSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTA 322
Query: 125 RAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK 184
+ W + G ++ H + G L + S D T +LWD+ GA +
Sbjct: 323 KLWKTD-GTLLQTFEGHLDRLARVAFHPSGKYLGTT-SYDKTWRLWDINT-GAELLLQEG 379
Query: 185 YQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLL 242
+ + ++F + G+D+ +VWDLR G + QGH + ++ SP+G +L
Sbjct: 380 HSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLA 439
Query: 243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL-KCGWSP-DGSKVTAGSSDRMV 300
+ G D + IWD+R + + I+ H NL+ + + P +G + S D V
Sbjct: 440 SGGEDNQCRIWDLR----MRKSLYIIPAHA-----NLVSQVKYEPQEGYFLATASYDMKV 490
Query: 301 YIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
IW ++ L GH V A I + S D+ I L
Sbjct: 491 NIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKL 534
Score = 174 (66.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 120 PDKTLRAWDVETGKQIKKMA-EHNSF-----VNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
PD+ + A K K MA + ++F + C SR G ++ + S G KLW+M
Sbjct: 227 PDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGK-ILATCSLSGVTKLWEMP 285
Query: 174 Q-RGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
Q I D K + T V FS D + T D K+W G + T +GH D +
Sbjct: 286 QVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLAR 344
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
++ P G YL T D +WD+ A + + EGH +++ + DG+
Sbjct: 345 VAFHPSGKYLGTTSYDKTWRLWDINTGAE----LLLQEGHS----RSVYGIAFQQDGALA 396
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ D + +WD + R + GH V F + S D Q + ++
Sbjct: 397 ASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 266 (98.7 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 74/277 (26%), Positives = 126/277 (45%)
Query: 44 SSLESPIMLLTGHQSA--VYTMKFNPAGTVIASGSHDRDIFLWHV-------------HG 88
+SL S + + T H + + ++FN T++A+G D I LW + H
Sbjct: 447 ASLPS-VCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHK 505
Query: 89 DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC 148
+N L GH + + ++ D ++S S DKT+R W ++T + H V
Sbjct: 506 PQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDV 565
Query: 149 CPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDND 207
S G V+ S D TA+LW ++ F + V F S+ ++TG D
Sbjct: 566 KFSPLGH-YFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKT 624
Query: 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI 267
++WD+ G GH + + +++SPDG +L + G D +C+WD+ R +K
Sbjct: 625 CRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIG----SGRRLKS 680
Query: 268 LEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
+ GH +L +S DG+ + +G +D V +WD
Sbjct: 681 MRGHAR---ASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 224 (83.9 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/207 (26%), Positives = 100/207 (48%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV-LKGHKNAILDLHWTTD 111
L GH VY + F+P + S S D+ + LW + D +V KGH + D+ ++
Sbjct: 513 LIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSL--DTYTALVSYKGHTQPVWDVKFSPL 570
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G ++AS D+T R W + ++ A H + V+ C V +GS D T ++WD
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHINDVD-CVEFHPNSNYVFTGSSDKTCRMWD 629
Query: 172 MRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH-QDMI 229
+ ++ F + ++ S + +GG D + VWD+ G +++GH + +
Sbjct: 630 VHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASL 689
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMR 256
++ S DG+ L++ D + +WD++
Sbjct: 690 YSLAFSRDGTVLVSGCADNSVRVWDVK 716
Score = 211 (79.3 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 55/207 (26%), Positives = 99/207 (47%)
Query: 42 RTSSLESPIMLLT--GHQSAVYTMKFNPAGTVIASGSHDRDIFLW---HVHGDCKNFMVL 96
R SL++ L++ GH V+ +KF+P G + SHD+ LW H++ +
Sbjct: 542 RLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYP----LRIF 597
Query: 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
GH N + + + + + + + S DKT R WDV TG ++ H + VN S G
Sbjct: 598 AGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRW 657
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPD--KYQITAVSFSDASDKIYTGGIDNDVKVWDLR 214
L SG +DG +WD+ +++ + + +++FS + +G DN V+VWD++
Sbjct: 658 LA-SGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVK 716
Query: 215 KG--EVSMTLQGHQDMITGMSLSPDGS 239
K + + + + G + DG+
Sbjct: 717 KNTNDAGPEPEAFNNNVNGNETNSDGT 743
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 61/259 (23%), Positives = 111/259 (42%)
Query: 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN--SCCPS 151
+V G +++ + L W+ DG + S L+ + + +K+ H+ V S P
Sbjct: 475 LVAAGFQDSYIKL-WSLDGKPLKSV-----LKRDRHKPQENTRKLIGHSGPVYGVSFSPD 528
Query: 152 RRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKV 210
+ ++S S+D T +LW + A+ ++ Q + V FS T D ++
Sbjct: 529 NK---YLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARL 585
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC-IWDMRPYAPQNRCVKILE 269
W GH + + + P+ +Y+ T D K C +WD+ CV++
Sbjct: 586 WATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSD-KTCRMWDVHT----GNCVRVFL 640
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHT-GSVNESVFHA 328
GH ++ N L SPDG + +G D ++ +WD S R L + GH S+ F
Sbjct: 641 GHTNSV--NCLAV--SPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSR 696
Query: 329 TEPVIGSCSSDKQIYLGEI 347
V+ S +D + + ++
Sbjct: 697 DGTVLVSGCADNSVRVWDV 715
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 262 (97.3 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 81/300 (27%), Positives = 137/300 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTV-IASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTT 110
+ GH + +F+PA + +A+GS D +W G K+ LKGH +L + W+
Sbjct: 148 IPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKH--TLKGHAGWVLGVSWSP 205
Query: 111 DGSQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PS---RRGPPLVVSGSDD 164
DG+++ + S DKT+R WD ETGKQ+ ++ H +V P R G P +VS S D
Sbjct: 206 DGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKD 265
Query: 165 GTAKLWDMRQRGAIQTFPD-KYQITAVSFS--DASDKIYTGGIDNDVKVWDLRKGEVSMT 221
TA++W + K ++ V + + + +YT D VKVWD KG +
Sbjct: 266 FTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHD 325
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
L+ H + ++LS D ++ C+ +D P K + + +EK
Sbjct: 326 LKSHAHWVNHLALSTD--FV------CRTGFFDHTKTVPATAEEKTAKAKER-YEKAARV 376
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTTS--RRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
G + ++ + S D +Y++D + + + ++ GH VN F +I S D
Sbjct: 377 GGKIVE--RLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWD 434
Score = 218 (81.8 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 75/259 (28%), Positives = 118/259 (45%)
Query: 52 LLTGHQSAVYTMKFNPA-GT-VIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHW 108
+L+GH+ +V +++ GT V+ + SHD+ + +W V G + LK H + + L
Sbjct: 281 VLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHD--LKSHAHWVNHLAL 338
Query: 109 TTDG-SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+TD + KT+ A E + K+ E + V R +VS SDD T
Sbjct: 339 STDFVCRTGFFDHTKTVPATAEEKTAKAKERYEKAARVGGKIVER-----LVSASDDFTM 393
Query: 168 KLWDMRQRGA---IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG 224
L+D G + + Q+ V+FS I + G DN K+W+ R G+ TL+G
Sbjct: 394 YLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRG 453
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
H + S S D L+T D L +W++R + L GH E + W
Sbjct: 454 HVAPVYQCSFSADSRLLVTASKDTTLKVWNVRT----GKLATDLPGH----EDEVYGVDW 505
Query: 285 SPDGSKVTAGSSDRMVYIW 303
SPDG +V +G D+ V +W
Sbjct: 506 SPDGQRVGSGGRDKAVRLW 524
Score = 199 (75.1 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 71/302 (23%), Positives = 129/302 (42%)
Query: 53 LTGHQSAVYTMKFNPA-----GTV-IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
L GH V + + P GT + S S D +W V+ + VL GHK ++ +
Sbjct: 234 LKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTG-RTEHVLSGHKGSVSCV 292
Query: 107 HWTT-DGSQII-SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
W +G+ ++ +AS DKT++ WD G + + H +VN S + +G D
Sbjct: 293 RWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTDF--VCRTGFFD 350
Query: 165 GTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD-LRKGEVSMT-L 222
T + + + ++Y+ A +++ + D + ++D L G + +
Sbjct: 351 HTKTVPATAEEKTAKA-KERYEKAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARM 409
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
GHQ + ++ SPDGS + + G D +W+ R + + L GH + +C
Sbjct: 410 IGHQKQVNHVTFSPDGSMIASAGWDNATKLWNAR----DGKFINTLRGHV----APVYQC 461
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+S D + S D + +W+ + ++ LPGH V + +GS DK +
Sbjct: 462 SFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAV 521
Query: 343 YL 344
L
Sbjct: 522 RL 523
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 41/122 (33%), Positives = 58/122 (47%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
PI + GHQ V + F+P G++IAS D LW+ D K L+GH + +
Sbjct: 405 PIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNAR-DGKFINTLRGHVAPVYQCSF 463
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ D +++AS D TL+ W+V TGK + H V S G V SG D +
Sbjct: 464 SADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQR-VGSGGRDKAVR 522
Query: 169 LW 170
LW
Sbjct: 523 LW 524
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLH 107
+P L GH V + ++P GT +A+ S D+ + +W + LKGH + +
Sbjct: 186 TPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIA 245
Query: 108 WTT-----DGS-QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP--SRRGPPLVV 159
W DG+ +++SAS D T R W V TG+ ++ H V SC + G +V
Sbjct: 246 WEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSV-SCVRWGAGNGTGVVY 304
Query: 160 SGSDDGTAKLWD 171
+ S D T K+WD
Sbjct: 305 TASHDKTVKVWD 316
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 263 (97.6 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 72/264 (27%), Positives = 126/264 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V++ + +I SGS DR + +W+ G+C + L GH + + +H
Sbjct: 339 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIH--TLYGHTSTVRCMH--LH 392
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+++S S D TLR WD+ETG+ + + H + V C G VVSG+ D K+WD
Sbjct: 393 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRR-VVSGAYDFMVKVWD 449
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ T ++ ++ F + +G +D ++VWD+ G TL GHQ + +
Sbjct: 450 PETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 507
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
GM L + L++ D + IWD++ +C++ L+G + ++ + C
Sbjct: 508 GMELKDN--ILVSGNADSTVKIWDIKT----GQCLQTLQGPSKH--QSAVTCLQFNKNFV 559
Query: 291 VTAGSSDRMVYIWDTTSRRILYKL 314
+T+ S D V +WD + + L
Sbjct: 560 ITS-SDDGTVKLWDLKTGEFIRNL 582
Score = 247 (92.0 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 74/236 (31%), Positives = 109/236 (46%)
Query: 42 RTSSLESPIMLLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGH 99
R L SP +L GH V T ++F G I SGS D + +W V G C +V GH
Sbjct: 288 RRGELRSP-KVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GH 342
Query: 100 KNAILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
+ W++ + IIS S D+TL+ W+ ETG+ I + H S V C
Sbjct: 343 TGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KR 395
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
VVSGS D T ++WD+ + + V + ++ +G D VKVWD
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETE 453
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
TLQGH + + SL DG ++++ +D + +WD+ C+ L GHQ
Sbjct: 454 TCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ 503
Score = 230 (86.0 bits), Expect = 9.1e-17, P = 9.1e-17
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 84 WHVHGDCKNFMVLKGHKNAILD-LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
W G+ ++ VLKGH + ++ L + G++I+S S D TL+ W TGK ++ + H
Sbjct: 287 WR-RGELRSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 343
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG 202
V S S+ +++SGS D T K+W+ I T + T ++ +G
Sbjct: 344 GGVWS---SQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHEKRVVSG 399
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D ++VWD+ G+ L GH + + DG +++ D + +WD P+
Sbjct: 400 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD-----PET 452
Query: 263 R-CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C+ L+GH + L+ DG V +GS D + +WD + ++ L GH
Sbjct: 453 ETCLHTLQGHTNRVYS--LQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 506
Query: 322 NESVFHATEPVIGSCSSDKQIY 343
+ V G+ S +I+
Sbjct: 507 SGMELKDNILVSGNADSTVKIW 528
Score = 217 (81.4 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 61/203 (30%), Positives = 93/203 (45%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
IIS S D+TL+ W+ ETG+ I + H S V C VVSGS D T ++WD+
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KRVVSGSRDATLRVWDIET 412
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + V + ++ +G D VKVWD TLQGH + + S
Sbjct: 413 GQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTNRV--YS 468
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
L DG ++++ +D + +WD+ C+ L GHQ L G + + +
Sbjct: 469 LQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQS------LTSGMELKDNILVS 518
Query: 294 GSSDRMVYIWDTTSRRILYKLPG 316
G++D V IWD + + L L G
Sbjct: 519 GNADSTVKIWDIKTGQCLQTLQG 541
Score = 172 (65.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 41/131 (31%), Positives = 75/131 (57%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E+ + L GH + VY+++F+ G + SGS D I +W V G+C + L GH++
Sbjct: 453 ETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIH--TLTGHQSLTSG 508
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKM---AEHNSFVNSCCPSRRGPPLVVSGS 162
+ + ++S + D T++ WD++TG+ ++ + ++H S V +C + V++ S
Sbjct: 509 ME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAV-TCLQFNKN--FVITSS 563
Query: 163 DDGTAKLWDMR 173
DDGT KLWD++
Sbjct: 564 DDGTVKLWDLK 574
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 268 (99.4 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 68/262 (25%), Positives = 124/262 (47%)
Query: 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRR 153
+V++ H +A+ ++ DG +I S DKTL+ + ETG+++ ++ H V CC
Sbjct: 609 LVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV-LCCAFST 667
Query: 154 GPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIY--TGGIDNDVKV 210
+ + S D K+W+ + T+ + Q+ F+++S + TG D +K+
Sbjct: 668 DDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKL 727
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI--- 267
WDL + E T+ GH + + SPD L + D L +WD A + + + +
Sbjct: 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATS-ANERKSINVKQF 786
Query: 268 ---LEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNES 324
LE Q + E + C WS DG+++ + ++ +++W+T SR + GH V+
Sbjct: 787 FLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNK-IFLWNTDSRSKVADCRGHLSWVHGV 845
Query: 325 VFHATEPVIGSCSSDKQIYLGE 346
+F + S D+ I L E
Sbjct: 846 MFSPDGSSFLTSSDDQTIRLWE 867
Score = 200 (75.5 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 72/272 (26%), Positives = 123/272 (45%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
+++ H AVY F+ G IAS D+ + ++ K + +K H++ +L ++T
Sbjct: 609 LVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEK-LLEIKAHEDEVLCCAFST 667
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDDGTAK 168
D I + S DK ++ W+ TG+ + EH+ VN CC L+ +GS D K
Sbjct: 668 DDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVN-CCHFTNSSHHLLLATGSSDCFLK 726
Query: 169 LWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTG-GIDNDVKVWDL-----RKG----E 217
LWD+ Q+ T F + FS DK+ D +K+WD RK +
Sbjct: 727 LWDLNQKECRNTMFGHTNSVNHCRFSP-DDKLLASCSADGTLKLWDATSANERKSINVKQ 785
Query: 218 VSMTLQGHQ-DM---ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
+ L+ Q DM + S S DG+ ++ + K+ +W+ + C GH
Sbjct: 786 FFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKN-KIFLWNTDSRSKVADC----RGHL- 839
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
++ ++ +SPDGS S D+ + +W+T
Sbjct: 840 SWVHGVM---FSPDGSSFLTSSDDQTIRLWET 868
Score = 174 (66.3 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 62/261 (23%), Positives = 123/261 (47%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH S V+ + F+P G+ + S D+ I LW CKN V+ + +D+ + +
Sbjct: 837 GHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQE---VDVVFQENEVM 893
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL--VVSGSDDGTAKLWDM 172
+++ + L+ + TG QI + E V+ CC S P L + G ++G ++ ++
Sbjct: 894 VLAVDHIRRLQLINGRTG-QIDYLTEAQ--VSCCCLS---PHLQYIAFGDENGAIEILEL 947
Query: 173 RQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
Q+ F K + + F+ + + D +++VW+ + + + L+GHQ+ +
Sbjct: 948 VNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKC-IFLRGHQETVKD 1006
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
L + S LL+ D + +W++ N+ K HQ +L C S D +K
Sbjct: 1007 FRLLKN-SRLLSWSFDGTVKVWNI---ITGNK-EKDFVCHQGT----VLSCDISHDATKF 1057
Query: 292 TAGSSDRMVYIWDTTSRRILY 312
++ S+D+ IW+ ++ +L+
Sbjct: 1058 SSTSADKTAKIWNVSNGELLH 1078
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 61/248 (24%), Positives = 105/248 (42%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHW 108
++ + H+ V F+ IA+ S D+ + +W+ + G+ + H + H+
Sbjct: 650 LLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVH--TYDEHSEQVNCCHF 707
Query: 109 TTDGSQIISA--SPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDD 164
T ++ A S D L+ WD+ + M H + VN C R P L+ S S D
Sbjct: 708 TNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHC---RFSPDDKLLASCSAD 764
Query: 165 GTAKLWDM---RQRGAI---QTF---PDKYQ-----ITAVSFSDASDKIYTGGIDNDVKV 210
GT KLWD +R +I Q F D + + S+S +I N + +
Sbjct: 765 GTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAA-KNKIFL 823
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
W+ +GH + G+ SPDGS LT+ D + +W+ + +N V + +
Sbjct: 824 WNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVC-KNSAVMLKQE 882
Query: 271 HQHNFEKN 278
F++N
Sbjct: 883 VDVVFQEN 890
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQI 115
H+ V+ ++F + S S D +I +W+ D + L+GH+ + D + S++
Sbjct: 959 HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLD--KCIFLRGHQETVKDFRLLKN-SRL 1015
Query: 116 ISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR 175
+S S D T++ W++ TG + K H V SC S S S D TAK+W++
Sbjct: 1016 LSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFS-STSADKTAKIWNVSNG 1074
Query: 176 GAIQTFPDKYQ---------ITAVSFS-DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
+ + +T + FS D I GG +K W++ GE S T +
Sbjct: 1075 ELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAGGY---IKWWNVVTGESSQTFYTN 1131
Query: 226 QDMITGMSLSPD 237
+ + +SPD
Sbjct: 1132 GTNLKKIHVSPD 1143
>UNIPROTKB|B4DXK8 [details] [associations]
symbol:UTP15 "cDNA FLJ57656, highly similar to U3 small
nucleolar RNA-associated protein 15 homolog" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 HOGENOM:HOG000185028
HOVERGEN:HBG080690 EMBL:AC010279 UniGene:Hs.406703 HGNC:HGNC:25758
ChiTaRS:UTP15 IPI:IPI00967090 EMBL:AK302021 SMR:B4DXK8
STRING:B4DXK8 Ensembl:ENST00000508491 UCSC:uc011cso.1
Uniprot:B4DXK8
Length = 499
Score = 261 (96.9 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 63/270 (23%), Positives = 125/270 (46%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ PI + + Y F G ++ +GS D + L+ + G +GH A+ +
Sbjct: 51 QEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHTV 109
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ P L ++GS D T
Sbjct: 110 DFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHT 169
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R ++ + + +V + + + G VKVWD+ KG ++ ++L+ H
Sbjct: 170 VKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQLLVSLKNH 228
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+T + LS G LL+ +D K+ ++ Y K++ H ++ ++L +
Sbjct: 229 HKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSY-------KVV--HSFDYAASILSLALA 279
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315
+ + G ++ ++ + S LP
Sbjct: 280 HEDETIVVGMTNGILSVKHRKSEAKKESLP 309
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 56/225 (24%), Positives = 103/225 (45%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++ S D ++ +D+ +++ H V++ VVSG+DD T KLW
Sbjct: 72 DGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV-DFTADKYHVVSGADDYTVKLW 130
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + D TG D+ VK++D R E ++++ H
Sbjct: 131 DIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSESVLSVE-HGQP 189
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L++ G + +WDM + + L+ H H L C S G
Sbjct: 190 VESVLLFPSGGLLVSAG-GRYVKVWDM---LKGGQLLVSLKNH-HKTVTCL--C-LSSSG 241
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ +GS DR V ++ TTS ++++ ++ ++ H E ++
Sbjct: 242 QRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALAHEDETIV 286
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 263 (97.6 bits), Expect = 7.5e-22, P = 7.5e-22
Identities = 84/299 (28%), Positives = 137/299 (45%)
Query: 35 PGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNF 93
PG + R + + + + H V ++F+P ++A+G DR + LW V G+ C+
Sbjct: 302 PGSGKEVRVPA--TALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFK 359
Query: 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRR 153
L G I + + + GS +++AS D R W V+ + + H+ V S
Sbjct: 360 GSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSA-KFLL 418
Query: 154 GPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
+VSGS D T KLWD+R + I+T + ++ + +G D ++ WD+
Sbjct: 419 DNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQC--VMSGHFDKKIRFWDI 476
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R + M L G IT + L+P+ + LL+ D L + D+R A +K
Sbjct: 477 RSESIVREMELLGK---ITALDLNPERTELLSCSRDDLLKVIDLRTNA-----IK----- 523
Query: 272 QHNFEKNLLKCG--W-----SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG-HTGSVN 322
F KCG W SPDGS V AGS++ +YIW + ++ L H+ S+N
Sbjct: 524 -QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSIN 581
Score = 230 (86.0 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 68/256 (26%), Positives = 119/256 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L+G + + +++F+ AG+ + + S+D +W V D + L GH +L + D
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD-DYRLRHTLTGHSGKVLSAKFLLDN 420
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++I+S S D+TL+ WD+ + IK + +S + C + V+SG D + WD+
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQ----CVMSGHFDKKIRFWDI 476
Query: 173 RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ--GHQ---D 227
R ++ +ITA+ + ++ + D+ +KV DLR + T G + D
Sbjct: 477 RSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSD 536
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
T + SPDGSY+ + L IW + + K+L QH+ N + WSP
Sbjct: 537 W-TRVVFSPDGSYVAAGSAEGSLYIWSVLT----GKVEKVLS-KQHSSSINAV--AWSPS 588
Query: 288 GSKVTAGSSDRMVYIW 303
GS V + +W
Sbjct: 589 GSHVVSVDKGCKAVLW 604
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 263 (97.6 bits), Expect = 7.5e-22, P = 7.5e-22
Identities = 84/299 (28%), Positives = 135/299 (45%)
Query: 35 PGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNF 93
PG + + R + + + + H V ++F+P ++A+G DR + LW V GD C+
Sbjct: 302 PGSSKEVRVPT--TAMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFK 359
Query: 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRR 153
L G I + + + GS +++AS D R W V+ + + H+ V S
Sbjct: 360 GSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSA-KFLL 418
Query: 154 GPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
+VSGS D T KLWD+R + I+T + ++ + +G D ++ WD+
Sbjct: 419 DNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQC--VMSGHFDKKIRFWDI 476
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R + M L G IT + L+P+ + LL+ D L I D+R +
Sbjct: 477 RSESIVREMELLGK---ITALDLNPERTELLSCSRDDLLKIIDLR-----------INAV 522
Query: 272 QHNFEKNLLKCG--W-----SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG-HTGSVN 322
+ F KCG W SPDG V AGS++ +YIW S ++ L H S+N
Sbjct: 523 RQTFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSIN 581
Score = 225 (84.3 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 67/256 (26%), Positives = 117/256 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L+G + + +++F+ AG+ + + S+D +W V D + L GH +L + D
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD-DYRLRHTLTGHSGKVLSAKFLLDN 420
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++I+S S D+TL+ WD+ + IK + +S + C + V+SG D + WD+
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQ----CVMSGHFDKKIRFWDI 476
Query: 173 RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ--GHQ---D 227
R ++ +ITA+ + ++ + D+ +K+ DLR V T G + D
Sbjct: 477 RSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSD 536
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
T + SPDG Y+ + L IW + + K+L QH N + WSP
Sbjct: 537 W-TRVVFSPDGGYVAAGSAEGSLYIWSVL----SGKVEKVLS-KQHGSSINAV--AWSPS 588
Query: 288 GSKVTAGSSDRMVYIW 303
GS V + +W
Sbjct: 589 GSHVVSVDKGSKAVLW 604
>UNIPROTKB|Q8TED0 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 EMBL:AK022849
EMBL:AK074217 EMBL:AC010279 EMBL:BC013064 EMBL:CR457295
IPI:IPI00152708 RefSeq:NP_115551.2 UniGene:Hs.406703
ProteinModelPortal:Q8TED0 SMR:Q8TED0 STRING:Q8TED0
PhosphoSite:Q8TED0 DMDM:296452998 SWISS-2DPAGE:Q8TED0 PaxDb:Q8TED0
PRIDE:Q8TED0 DNASU:84135 Ensembl:ENST00000296792 GeneID:84135
KEGG:hsa:84135 UCSC:uc003kcw.1 GeneCards:GC05P072898
HGNC:HGNC:25758 neXtProt:NX_Q8TED0 PharmGKB:PA142670631
InParanoid:Q8TED0 ChiTaRS:UTP15 GenomeRNAi:84135 NextBio:73441
ArrayExpress:Q8TED0 Bgee:Q8TED0 CleanEx:HS_UTP15
Genevestigator:Q8TED0 GermOnline:ENSG00000164338 Uniprot:Q8TED0
Length = 518
Score = 261 (96.9 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 63/270 (23%), Positives = 125/270 (46%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ PI + + Y F G ++ +GS D + L+ + G +GH A+ +
Sbjct: 70 QEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHTV 128
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ P L ++GS D T
Sbjct: 129 DFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHT 188
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R ++ + + +V + + + G VKVWD+ KG ++ ++L+ H
Sbjct: 189 VKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQLLVSLKNH 247
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+T + LS G LL+ +D K+ ++ Y K++ H ++ ++L +
Sbjct: 248 HKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSY-------KVV--HSFDYAASILSLALA 298
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315
+ + G ++ ++ + S LP
Sbjct: 299 HEDETIVVGMTNGILSVKHRKSEAKKESLP 328
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 56/225 (24%), Positives = 103/225 (45%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++ S D ++ +D+ +++ H V++ VVSG+DD T KLW
Sbjct: 91 DGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV-DFTADKYHVVSGADDYTVKLW 149
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + D TG D+ VK++D R E ++++ H
Sbjct: 150 DIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSESVLSVE-HGQP 208
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L++ G + +WDM + + L+ H H L C S G
Sbjct: 209 VESVLLFPSGGLLVSAG-GRYVKVWDM---LKGGQLLVSLKNH-HKTVTCL--C-LSSSG 260
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ +GS DR V ++ TTS ++++ ++ ++ H E ++
Sbjct: 261 QRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALAHEDETIV 305
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 263 (97.6 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 72/264 (27%), Positives = 126/264 (47%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L GH V++ + +I SGS DR + +W+ G+C + L GH + + +H
Sbjct: 339 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIH--TLYGHTSTVRCMH--LH 392
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
+++S S D TLR WD+ETG+ + + H + V C G VVSG+ D K+WD
Sbjct: 393 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRR-VVSGAYDFMVKVWD 449
Query: 172 MRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ T ++ ++ F + +G +D ++VWD+ G TL GHQ + +
Sbjct: 450 PETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 507
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
GM L + L++ D + IWD++ +C++ L+G + ++ + C
Sbjct: 508 GMELKDN--ILVSGNADSTVKIWDIKT----GQCLQTLQGPSKH--QSAVTCLQFNKNFV 559
Query: 291 VTAGSSDRMVYIWDTTSRRILYKL 314
+T+ S D V +WD + + L
Sbjct: 560 ITS-SDDGTVKLWDLKTGEFIRNL 582
Score = 248 (92.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 74/236 (31%), Positives = 110/236 (46%)
Query: 42 RTSSLESPIMLLTGHQSAVYT-MKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGH 99
R L+SP +L GH V T ++F G I SGS D + +W V G C +V GH
Sbjct: 288 RRGELKSP-KVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GH 342
Query: 100 KNAILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
+ W++ + IIS S D+TL+ W+ ETG+ I + H S V C
Sbjct: 343 TGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KR 395
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
VVSGS D T ++WD+ + + V + ++ +G D VKVWD
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETE 453
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
TLQGH + + SL DG ++++ +D + +WD+ C+ L GHQ
Sbjct: 454 TCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ 503
Score = 233 (87.1 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 69/262 (26%), Positives = 118/262 (45%)
Query: 84 WHVHGDCKNFMVLKGHKNAILD-LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
W G+ K+ VLKGH + ++ L + G++I+S S D TL+ W TGK ++ + H
Sbjct: 287 WR-RGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 343
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG 202
V S S+ +++SGS D T K+W+ I T + T ++ +G
Sbjct: 344 GGVWS---SQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHEKRVVSG 399
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
D ++VWD+ G+ L GH + + DG +++ D + +WD P+
Sbjct: 400 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD-----PET 452
Query: 263 R-CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C+ L+GH + L+ DG V +GS D + +WD + ++ L GH
Sbjct: 453 ETCLHTLQGHTNRVYS--LQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 506
Query: 322 NESVFHATEPVIGSCSSDKQIY 343
+ V G+ S +I+
Sbjct: 507 SGMELKDNILVSGNADSTVKIW 528
Score = 217 (81.4 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 61/203 (30%), Positives = 93/203 (45%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
IIS S D+TL+ W+ ETG+ I + H S V C VVSGS D T ++WD+
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KRVVSGSRDATLRVWDIET 412
Query: 175 RGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+ + V + ++ +G D VKVWD TLQGH + + S
Sbjct: 413 GQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTNRV--YS 468
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
L DG ++++ +D + +WD+ C+ L GHQ L G + + +
Sbjct: 469 LQFDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQS------LTSGMELKDNILVS 518
Query: 294 GSSDRMVYIWDTTSRRILYKLPG 316
G++D V IWD + + L L G
Sbjct: 519 GNADSTVKIWDIKTGQCLQTLQG 541
Score = 172 (65.6 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 41/131 (31%), Positives = 75/131 (57%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E+ + L GH + VY+++F+ G + SGS D I +W V G+C + L GH++
Sbjct: 453 ETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIH--TLTGHQSLTSG 508
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKM---AEHNSFVNSCCPSRRGPPLVVSGS 162
+ + ++S + D T++ WD++TG+ ++ + ++H S V +C + V++ S
Sbjct: 509 ME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAV-TCLQFNKN--FVITSS 563
Query: 163 DDGTAKLWDMR 173
DDGT KLWD++
Sbjct: 564 DDGTVKLWDLK 574
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 262 (97.3 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 70/292 (23%), Positives = 130/292 (44%)
Query: 54 TGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
+GH V ++F P G ++ S D + +W V+ K GH A+ D+ ++ DG
Sbjct: 279 SGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDG 338
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHN-SFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
S+ ++A DK ++ WD ETG+ I + +V P ++++G D WD
Sbjct: 339 SKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 398
Query: 172 MRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDM 228
+ Q + D++ + ++F D + + T D ++VW+ V + + H
Sbjct: 399 INTGEVTQEY-DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 457
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ +S+ P+G++L +D ++ I+ R N+ K GH + +SPDG
Sbjct: 458 MPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHI--VAGYACQVNFSPDG 514
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPV-IGSCSSD 339
V +G + + WD S ++ L H G + +H E + +C D
Sbjct: 515 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWD 566
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/165 (24%), Positives = 68/165 (41%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDL-RKGEVSMTLQGHQDMITGMSLSPDGSYLLTN 244
++A+ F + + G+D VK+WD+ G+ T GH + + S DGS LT
Sbjct: 285 VSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTA 344
Query: 245 GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK---VTAGSSDRMVY 301
G D + WD + + + + L +PD K + AG SD+ +
Sbjct: 345 GYDKNIKYWDTET----GQVISTFSTGKIPYVVKL-----NPDDDKQNILLAGMSDKKIV 395
Query: 302 IWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
WD + + + H G+VN F + S DK + + E
Sbjct: 396 QWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 262 (97.3 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 61/213 (28%), Positives = 106/213 (49%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
+L + + +L GH VY+ +F + + S S D I W + G N ++ +GH +
Sbjct: 326 NLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVW 384
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
DL + SAS D+T R W + ++ A H + V+ C + +GS D
Sbjct: 385 DLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVD-CVKFHPNSNYLATGSTD 443
Query: 165 GTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
T +LW +Q +++ F + + +++FS + + G D +K+WDL G + L+
Sbjct: 444 KTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 503
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
GH D IT ++ SPD S + + MD + +WD+R
Sbjct: 504 GHTDNITSLTFSPDSSLVASASMDNSVRVWDIR 536
Score = 223 (83.6 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 59/214 (27%), Positives = 93/214 (43%)
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
VL+GH + + D S ++S S D ++R WD+ + H V S
Sbjct: 333 VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHS 392
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDL 213
S S D TA+LW + ++ + + V F S+ + TG D V++W
Sbjct: 393 L-YFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWST 451
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
++G GH+ + ++ SP+G YL + G D +L +WD+ K L GH
Sbjct: 452 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA----SGTLYKELRGHTD 507
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307
N + +SPD S V + S D V +WD S
Sbjct: 508 N----ITSLTFSPDSSLVASASMDNSVRVWDIRS 537
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 53/203 (26%), Positives = 84/203 (41%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
+L GH V+ + +P AS SHDR LW + GH + + +
Sbjct: 374 VLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYP-LRIYAGHLADVDCVKFHP 432
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
+ + + + S DKT+R W + G ++ H V S S G L +G D KLW
Sbjct: 433 NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ-RLKLW 491
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+ + IT+++FS S + + +DN V+VWD+R S G +
Sbjct: 492 DLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSEL 551
Query: 230 TGMSLSPDGSYLLTNGMDCKLCI 252
G+ + L M C L +
Sbjct: 552 VGVYTGQMSNVLSVQFMACNLLL 574
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 39/191 (20%), Positives = 79/191 (41%)
Query: 158 VVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++S S+D + + WD+ + Y + + S S + D ++W +
Sbjct: 353 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRT 412
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276
GH + + P+ +YL T D + +W + Q V++ GH+
Sbjct: 413 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQ----QGNSVRLFTGHRGP-- 466
Query: 277 KNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
+L +SP+G + + D+ + +WD S + +L GHT ++ F ++ S
Sbjct: 467 --VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASA 524
Query: 337 SSDKQIYLGEI 347
S D + + +I
Sbjct: 525 SMDNSVRVWDI 535
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 82/302 (27%), Positives = 130/302 (43%)
Query: 37 PNGKQRTSSL-ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFM 94
P K R L + + L Q AV ++FN G + D+ + LW+ + G
Sbjct: 4 PEPKPRGPELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LR 61
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
GH +LD + D S + S DK + WDV +G+ ++K H VN+ +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 155 PPLVVSGSDDGTAKLWDMRQRGA--IQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVW 211
+++SGS D + + WD R R +QT + I++V SD ++ G +D V+ +
Sbjct: 122 T-VILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSD--HEVLAGSVDGRVRRY 178
Query: 212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
DLR G++ G IT S DG L + +D L + D + GH
Sbjct: 179 DLRMGQLFSDYVGSP--ITCTCFSRDGQCTLVSSLDSTLRLLDK----DTGELLGEYTGH 232
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
++ K L C S + V + S D V+ WD ++ LP V +H TEP
Sbjct: 233 KNQEYK--LDCCLSERDTHVVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYHPTEP 290
Query: 332 VI 333
+
Sbjct: 291 CL 292
Score = 139 (54.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 38/122 (31%), Positives = 58/122 (47%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL Q + + + DG+Y LT G D L +W+ P + ++ GH +E +L
Sbjct: 20 TLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN--PL--RGTLLRTYSGH--GYE--VL 71
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
S D S + +G D+ V +WD S +++ K GH G VN F+ VI S S D
Sbjct: 72 DAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 341 QI 342
+
Sbjct: 132 SV 133
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 52/213 (24%), Positives = 88/213 (41%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-----FMVLKGHKNAILDLHWT 109
GH V T++FN TVI SGS D + W DC++ L ++ I +
Sbjct: 107 GHAGKVNTVQFNEEATVILSGSIDSSVRCW----DCRSRKPEPVQTLDEARDGISSVK-V 161
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+D ++++ S D +R +D+ G+ S + C SR G +VS S D T +L
Sbjct: 162 SD-HEVLAGSVDGRVRRYDLRMGQLFSDYV--GSPITCTCFSRDGQCTLVS-SLDSTLRL 217
Query: 170 WDMRQRGAIQTFP----DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
D + + +Y++ S+ + + D V WDL +G + + L
Sbjct: 218 LDKDTGELLGEYTGHKNQEYKLDCC-LSERDTHVVSCSEDGKVFFWDLVEGVLVLALPVG 276
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
++ ++ P LLT M + W Y
Sbjct: 277 PSVVQSLAYHPTEPCLLT-AMGGSVQCWREEAY 308
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 265 (98.3 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 69/254 (27%), Positives = 126/254 (49%)
Query: 57 QSAVYTMKFNPAGTVIASGSHDR-DIFLWHVHGDCKNFMVLK--GHKNAILDLHWTTDGS 113
QS + T+ N G IA GS + +W + VLK H +A+ L +++DG
Sbjct: 296 QSNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSES---YVLKQQSHYDALSTLQYSSDGQ 352
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
+II+ + D ++ WD+ +G I +H S V+ C S+RG L S S DG+ + WD+
Sbjct: 353 RIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLF-SSSLDGSVRAWDLI 411
Query: 174 QRGAIQTF--PDKYQITAVSFSDASDKIYTGGIDN-DVKVWDLRKGEVSMTLQGHQDMIT 230
+ +TF P + Q + ++ + + + G D+ ++ +W ++ G++ TL GH+ ++
Sbjct: 412 RYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVS 471
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
+S + GS L + D + IWD+ ++ V+ L ++L + PDG +
Sbjct: 472 SLSFNSSGSLLASGSWDKTVRIWDI---FSRSGIVEPLP-----IPSDVLSLAFHPDGKE 523
Query: 291 VTAGSSDRMVYIWD 304
V S D + W+
Sbjct: 524 VCVASLDGQLTFWN 537
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 63/285 (22%), Positives = 131/285 (45%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
ES ++ H A+ T++++ G I +G+ D I +W ++ G C + H +A+
Sbjct: 329 ESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFC--IVTFTQHTSAVSG 386
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
L ++ G+ + S+S D ++RAWD+ + + + SC +V +GS D
Sbjct: 387 LCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDS 446
Query: 166 -TAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDL--RKGEVSMT 221
+W ++ ++T + ++++SF+ + + +G D V++WD+ R G V
Sbjct: 447 FEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVE-P 505
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCV---KILEGHQH----- 273
L D+++ ++ PDG + +D +L W+++ Q + K L G +
Sbjct: 506 LPIPSDVLS-LAFHPDGKEVCVASLDGQLTFWNVQE-GKQTSLIDGRKDLSGGRRFDDAR 563
Query: 274 -----NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313
+ K +S DGS V + + + V ++D + ++ K
Sbjct: 564 TAENSSLNKTFTSICYSADGSCVLSAGTSKYVCLYDIITGVLIKK 608
Score = 183 (69.5 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 48/208 (23%), Positives = 92/208 (44%)
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYT 201
S +++ + G + + S G +W+ + + Y ++ + +S +I T
Sbjct: 297 SNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIIT 356
Query: 202 GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ 261
G D +KVWD+ G +T H ++G+ S G+ L ++ +D + WD+ Y
Sbjct: 357 GADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRY--- 413
Query: 262 NRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRM-VYIWDTTSRRILYKLPGHTG 319
R + + C P G V AGS D +++W + ++L L GH G
Sbjct: 414 -RNFRTFTAPS----RVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEG 468
Query: 320 SVNESVFHATEPVIGSCSSDKQIYLGEI 347
V+ F+++ ++ S S DK + + +I
Sbjct: 469 PVSSLSFNSSGSLLASGSWDKTVRIWDI 496
Score = 175 (66.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 49/199 (24%), Positives = 92/199 (46%)
Query: 38 NGKQRTSSLESP--IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+GK + + S I+ T H SAV + F+ G V+ S S D + W + +NF
Sbjct: 360 DGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIR-YRNFRT 418
Query: 96 LKGHKNAILDLHWTTDGSQIISA-SPDK-TLRAWDVETGKQIKKMAEHNSFVNSCCPSRR 153
+I+ A S D + W V+TG+ ++ +A H V+S +
Sbjct: 419 FTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSS 478
Query: 154 GPPLVVSGSDDGTAKLWDMRQR-GAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD 212
G L+ SGS D T ++WD+ R G ++ P + +++F ++ +D + W+
Sbjct: 479 GS-LLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDGQLTFWN 537
Query: 213 LRKGEVSMTLQGHQDMITG 231
+++G+ + + G +D+ G
Sbjct: 538 VQEGKQTSLIDGRKDLSGG 556
Score = 171 (65.3 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 55/231 (23%), Positives = 101/231 (43%)
Query: 116 ISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR 175
I +S L W+ ++ + K H +++ S G +++G+DDG K+WDM
Sbjct: 313 IGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQR-IITGADDGKIKVWDMNSG 371
Query: 176 GAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM-ITGMS 233
I TF ++ + FS + +++ +D V+ WDL + T + + ++
Sbjct: 372 FCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIA 431
Query: 234 LSPDGSYLLTNGMDC-KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292
+ P G + D ++ +W ++ + ++ L GH E + ++ GS +
Sbjct: 432 VDPSGEIVCAGSQDSFEIFMWSVQT----GQLLETLAGH----EGPVSSLSFNSSGSLLA 483
Query: 293 AGSSDRMVYIWDTTSRR-ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+GS D+ V IWD SR I+ LP V FH + S D Q+
Sbjct: 484 SGSWDKTVRIWDIFSRSGIVEPLP-IPSDVLSLAFHPDGKEVCVASLDGQL 533
Score = 62 (26.9 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 31/124 (25%), Positives = 52/124 (41%)
Query: 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-----FMVLK---GHKNAILDLHW 108
+S V ++F+P G A S + I +W + F++ + GH + I+ + W
Sbjct: 96 KSPVGAIEFSPNGKFFAV-SLGKLIQVWRTPNSLEEREFAPFVLHREYTGHFDDIVSISW 154
Query: 109 TTDGSQIISASPDKTLRAWDVET--GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+ D IS S D T R V+ G + H + V S S+ + + S DG
Sbjct: 155 SADSRFFISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVSGFFSK-DQQTIYTVSKDGA 213
Query: 167 AKLW 170
+W
Sbjct: 214 LFVW 217
Score = 49 (22.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW 84
LTGH++ V + F+ I + S D +F+W
Sbjct: 186 LTGHKNTVVSGFFSKDQQTIYTVSKDGALFVW 217
>UNIPROTKB|H0Y8P4 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
OMA:QFEGHTK EMBL:AC010279 HGNC:HGNC:25758 ChiTaRS:UTP15
Ensembl:ENST00000509005 Uniprot:H0Y8P4
Length = 545
Score = 261 (96.9 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 63/270 (23%), Positives = 125/270 (46%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ PI + + Y F G ++ +GS D + L+ + G +GH A+ +
Sbjct: 97 QEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHTV 155
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ P L ++GS D T
Sbjct: 156 DFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHT 215
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R ++ + + +V + + + G VKVWD+ KG ++ ++L+ H
Sbjct: 216 VKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQLLVSLKNH 274
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+T + LS G LL+ +D K+ ++ Y K++ H ++ ++L +
Sbjct: 275 HKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSY-------KVV--HSFDYAASILSLALA 325
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315
+ + G ++ ++ + S LP
Sbjct: 326 HEDETIVVGMTNGILSVKHRKSEAKKESLP 355
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 56/225 (24%), Positives = 103/225 (45%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++ S D ++ +D+ +++ H V++ VVSG+DD T KLW
Sbjct: 118 DGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV-DFTADKYHVVSGADDYTVKLW 176
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + D TG D+ VK++D R E ++++ H
Sbjct: 177 DIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSESVLSVE-HGQP 235
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L++ G + +WDM + + L+ H H L C S G
Sbjct: 236 VESVLLFPSGGLLVSAG-GRYVKVWDM---LKGGQLLVSLKNH-HKTVTCL--C-LSSSG 287
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ +GS DR V ++ TTS ++++ ++ ++ H E ++
Sbjct: 288 QRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALAHEDETIV 332
>MGI|MGI:2145443 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2145443
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
ChiTaRS:UTP15 EMBL:AY151261 EMBL:AK049186 EMBL:AK162794
EMBL:BC034372 EMBL:BC065057 IPI:IPI00226889 RefSeq:NP_849249.1
UniGene:Mm.28221 ProteinModelPortal:Q8C7V3 SMR:Q8C7V3 STRING:Q8C7V3
PhosphoSite:Q8C7V3 PaxDb:Q8C7V3 PRIDE:Q8C7V3
Ensembl:ENSMUST00000040972 GeneID:105372 KEGG:mmu:105372
UCSC:uc007rom.1 InParanoid:Q8C7V3 NextBio:357640 Bgee:Q8C7V3
Genevestigator:Q8C7V3 GermOnline:ENSMUSG00000041747 Uniprot:Q8C7V3
Length = 528
Score = 260 (96.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 64/270 (23%), Positives = 123/270 (45%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ P+ + + Y F G ++ +GS D + L+ ++G +GH A+ +
Sbjct: 70 QEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDINGRAP-LRQFEGHTKAVHTV 128
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ P L V+GS D T
Sbjct: 129 DFTADNYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHT 188
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R + + +V + + + G VKVWD+ KG ++ ++L+ H
Sbjct: 189 VKIFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQLLVSLKNH 247
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+T + LS G LL+ +D K+ ++ Y K++ H ++ ++L S
Sbjct: 248 HKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSY-------KVV--HSFDYAASILSLALS 298
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315
+ G ++ ++ + S LP
Sbjct: 299 HQDETIVVGMTNGILSVKHRKSEAKKTSLP 328
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 55/225 (24%), Positives = 103/225 (45%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++ S D ++ +D+ +++ H V++ + VVSG+DD T KLW
Sbjct: 91 DGQLLVAGSEDGVVQLFDINGRAPLRQFEGHTKAVHTVDFTADNYH-VVSGADDYTVKLW 149
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + D TG D+ VK++D R + + ++ H
Sbjct: 150 DIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDARTNKNVLCVE-HGQP 208
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L++ G + +WDM + + L+ H H L C S G
Sbjct: 209 VESVLLFPSGGLLVSAG-GRYVKVWDM---LKGGQLLVSLKNH-HKTVTCL--C-LSSSG 260
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ +GS DR V ++ TTS ++++ ++ ++ H E ++
Sbjct: 261 QRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHQDETIV 305
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 259 (96.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 78/305 (25%), Positives = 134/305 (43%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKN---FMVLKGHKNAILDLHW 108
+ GH + + +F+P+ + + +GS D LW DC +KGH N + + W
Sbjct: 130 MNGHDGTIISAQFSPSTSSRLVTGSGDFTARLW----DCDTQTPIATMKGHTNWVSCVAW 185
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PSR----RGPPLVVSG 161
D S I + S D T+R WD + G I + H + + C P GP L+ SG
Sbjct: 186 APDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASG 245
Query: 162 SDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220
S D T ++W+++ R + T IT V + + IY+ D +++WD + G+
Sbjct: 246 SKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKTIRIWDAKDGKCLH 304
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
L+GH + +SLS + ++L +G +D + P K + ++
Sbjct: 305 ILKGHAARVNHLSLSTE--HVLRSGA------YDHTDFKP-----KSFSDERRKAKERYE 351
Query: 281 KCGWSPDGSKVTAGSSDRMVYIWDTT-SRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
C G ++ + S D + +WD S + + K+ GH VN + F I + S D
Sbjct: 352 AC-LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFD 410
Query: 340 KQIYL 344
+ L
Sbjct: 411 SSVRL 415
Score = 247 (92.0 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 75/278 (26%), Positives = 127/278 (45%)
Query: 71 VIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ--IISASPDKTLRAWD 128
++ASGS D + +W+V F L GH I + W G Q I S+S DKT+R WD
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLF-TLSGHTAPITCVRW---GGQNWIYSSSYDKTIRIWD 296
Query: 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT---AKLWDMRQRGAIQTFPDKY 185
+ GK + + H + VN S ++ SG+ D T K + +R A ++Y
Sbjct: 297 AKDGKCLHILKGHAARVNHLSLSTEH--VLRSGAYDHTDFKPKSFSDERRKA----KERY 350
Query: 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT-LQGHQDMITGMSLSPDGSYLLTN 244
+ + +++ + D + +WD +K +T + GHQ ++ S SPDG + T
Sbjct: 351 E---ACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATA 407
Query: 245 GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
D + +WD + + + L GH + +C WS D + + S D + +WD
Sbjct: 408 SFDSSVRLWDGKT----GKFLATLRGHV----AAVYQCAWSTDSRLLVSSSQDTTLKVWD 459
Query: 305 TTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
S+++ + LPGH V + + S +DK +
Sbjct: 460 VRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAV 497
Score = 225 (84.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 72/261 (27%), Positives = 123/261 (47%)
Query: 46 LESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILD 105
L + + L+GH + + +++ + +S S+D+ I +W D K +LKGH +
Sbjct: 258 LRTLLFTLSGHTAPITCVRWGGQNWIYSS-SYDKTIRIWDAK-DGKCLHILKGHAARVNH 315
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
L +T+ + S + D T + ++ ++ A+ C + G LV S SDD
Sbjct: 316 LSLSTE-HVLRSGAYDHT--DFKPKSFSDERRKAKERY---EACLKQSGERLV-SASDDL 368
Query: 166 TAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
LWD ++ T +Q + SFS I T D+ V++WD + G+ TL+
Sbjct: 369 QLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLR 428
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI-LEGHQHNFEKNLLKC 282
GH + + S D L+++ D L +WD+R ++ +K L GH E +
Sbjct: 429 GHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVR-----SKKMKFDLPGH----EDQVFAV 479
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
WSPDG +V +G +D+ V IW
Sbjct: 480 DWSPDGQRVASGGADKAVRIW 500
Score = 202 (76.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 71/309 (22%), Positives = 128/309 (41%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
++PI + GH + V + + P ++IA+GS D I W L+ H I+ L
Sbjct: 167 QTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMAL 226
Query: 107 HWTT------DGSQII-SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
W G ++ S S D T+R W+V+ + ++ H + + C G +
Sbjct: 227 CWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPIT--CVRWGGQNWIY 284
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
S S D T ++WD + + ++ +S S + +G D+ D +
Sbjct: 285 SSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLS-TEHVLRSGAYDHT----DFKPKSF 339
Query: 219 SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278
S + ++ L G L++ D +L +WD PQ I + H H +K
Sbjct: 340 SDERRKAKERYEAC-LKQSGERLVSASDDLQLILWD-----PQKSTKPITKMHGH--QKV 391
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
+ +SPDG + S D V +WD + + L L GH +V + + ++ S S
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQ 451
Query: 339 DKQIYLGEI 347
D + + ++
Sbjct: 452 DTTLKVWDV 460
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 259 (96.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 70/258 (27%), Positives = 120/258 (46%)
Query: 64 KFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKT 123
++N +GT+ +G DR + +W + L G ILD+ T D +I+A+
Sbjct: 234 EYN-SGTLF-TGGQDRAVKMWDTNSGTL-IKSLYGSLGNILDMAVTHDNKSVIAATSSNN 290
Query: 124 LRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD 183
L WDV +G+ + H V + S+ VVS + D T KLWD+ + T
Sbjct: 291 LFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLF 350
Query: 184 KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLT 243
A+ S +++G +D ++++WD++ G++ + GH +T +SLS +G+ +LT
Sbjct: 351 TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILT 410
Query: 244 NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW 303
+G D ++D R C L + N + SPD V AGS+D V++W
Sbjct: 411 SGRDNVHNVFDTRTL---EIC-GTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVW 466
Query: 304 DTTSRRILYKLPGHTGSV 321
+ I+ L T +
Sbjct: 467 SLSKGNIVSILKEQTSPI 484
Score = 212 (79.7 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 66/212 (31%), Positives = 96/212 (45%)
Query: 53 LTGHQS---AVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
LTGH AV KF+ V S ++DR I LW +H G C N ++ + NAI
Sbjct: 305 LTGHTDKVCAVDVSKFSSRHVV--SAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC---L 359
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ DG + S D LR WD++TGK + ++A H+S V S SR G ++ SG D+
Sbjct: 360 SIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDN-VHN 418
Query: 169 LWDMRQ-------RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
++D R R + + + +S D D + G D V VW L KG +
Sbjct: 419 VFDTRTLEICGTLRASGNRLASNWSRSCISPDD--DYVAAGSADGSVHVWSLSKGNIVSI 476
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
L+ I S S G L + + +C W
Sbjct: 477 LKEQTSPILCCSWSGIGKPLASADKNGYVCTW 508
Score = 189 (71.6 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 65/242 (26%), Positives = 111/242 (45%)
Query: 70 TVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQ-IISASPDKTLRAW 127
+VIA+ S + ++F+W V G ++ L GH + + + + S+ ++SA+ D+T++ W
Sbjct: 281 SVIAATSSN-NLFVWDVSSGRVRH--TLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 337
Query: 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI--QTFPDKY 185
D+ G + S N+ C S G V SG DG +LWD+ Q G + +
Sbjct: 338 DLHKGYCTNTVL-FTSNCNAICLSIDGLT-VFSGHMDGNLRLWDI-QTGKLLSEVAGHSS 394
Query: 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG----MSLSPDGSYL 241
+T+VS S ++I T G DN V+D R E+ TL+ + + +SPD Y+
Sbjct: 395 AVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYV 454
Query: 242 LTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVY 301
D + +W + + V IL+ +L C WS G + + + V
Sbjct: 455 AAGSADGSVHVWSLS----KGNIVSILKEQT----SPILCCSWSGIGKPLASADKNGYVC 506
Query: 302 IW 303
W
Sbjct: 507 TW 508
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 45/220 (20%), Positives = 92/220 (41%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPS-RRG 154
+ H+ + + + + + D+ ++ WD +G IK + + S N +
Sbjct: 221 IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSL--YGSLGNILDMAVTHD 278
Query: 155 PPLVVSGSDDGTAKLWDM---RQRGAIQTFPDKYQITAVSFSDASDK-IYTGGIDNDVKV 210
V++ + +WD+ R R + DK + AV S S + + + D +K+
Sbjct: 279 NKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDK--VCAVDVSKFSSRHVVSAAYDRTIKL 336
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WDL KG + T+ + + LS DG + + MD L +WD++ + + + G
Sbjct: 337 WDLHKGYCTNTVLFTSNC-NAICLSIDGLTVFSGHMDGNLRLWDIQT----GKLLSEVAG 391
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 310
H + S +G+++ D + ++DT + I
Sbjct: 392 HS----SAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEI 427
>UNIPROTKB|F1S2K2 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GeneTree:ENSGT00390000004228
OMA:QFEGHTK EMBL:CU694283 Ensembl:ENSSSCT00000015368 Uniprot:F1S2K2
Length = 518
Score = 259 (96.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 57/213 (26%), Positives = 104/213 (48%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ PI + + Y F G ++ +GS D + L+ + G +GH A+ +
Sbjct: 70 QEPIKTFSRFKDTAYCATFRQDGRLLIAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHTV 128
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ P L V+GS D T
Sbjct: 129 DFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHT 188
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R ++ + + +V + + + G VKVWD+ KG ++ ++L+ H
Sbjct: 189 VKMFDARTNQSVISVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDVLKGGQLLVSLKNH 247
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+T + LS G LL+ +D K+ ++ Y
Sbjct: 248 HKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSY 280
Score = 170 (64.9 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 55/225 (24%), Positives = 103/225 (45%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +I+ S D ++ +D+ +++ H V++ VVSG+DD T KLW
Sbjct: 91 DGRLLIAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV-DFTADKYHVVSGADDYTVKLW 149
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + D TG D+ VK++D R + ++++ H
Sbjct: 150 DIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNQSVISVE-HGQP 208
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L++ G + +WD+ + + L+ H H L C S G
Sbjct: 209 VESVLLFPSGGLLVSAG-GRYVKVWDV---LKGGQLLVSLKNH-HKTVTCL--C-LSSSG 260
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ +GS DR V ++ TTS ++++ ++ ++ H E ++
Sbjct: 261 QRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALAHEDETIV 305
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 259 (96.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 65/220 (29%), Positives = 102/220 (46%)
Query: 38 NGKQRTSSLES--PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G + SLES P+ + GH V + ++P+G + + +D LW + + +
Sbjct: 301 DGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQ-EEILH 359
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
+GH + D+ + TDGS + D R WD+ TG+ I + H + S G
Sbjct: 360 QEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGY 419
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFS-DASDKIYTGGIDNDVKVWDL 213
V +GS D T K+WD+RQR I T P +T V F + + + TG DN K+W
Sbjct: 420 H-VATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTH 478
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
TL GH+ + G+ +S DG + T D +W
Sbjct: 479 PGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 249 (92.7 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 73/261 (27%), Positives = 117/261 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
L GH + V + F+P TV +AS + D + LW + D + ++GH +
Sbjct: 268 LRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESD-EPVADIEGHSMRVA 326
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
+ W G + + D + R WD+E ++I H+ V G L +G D
Sbjct: 327 RVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGS-LAGTGGLD 385
Query: 165 GTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
++WD+R I +I ++FS + TG DN KVWDLR+ + T+
Sbjct: 386 AFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIP 445
Query: 224 GHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
HQ+++TG+ P+ G++LLT D IW ++P +K L GH E ++
Sbjct: 446 AHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSP----LKTLAGH----EGKVMGL 497
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
S DG + S DR +W
Sbjct: 498 DISLDGQLIATCSYDRTFKLW 518
Score = 215 (80.7 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 75/293 (25%), Positives = 124/293 (42%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDGS------QII 116
F+P ++A+ LW V DC L+GH + + H S +
Sbjct: 238 FSPNSKLLATACWSGLCKLWSVP-DCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLA 296
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMR- 173
S + D +++ W +E+ + + + H+ V PS R + + D + +LWD+
Sbjct: 297 SCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGR---FLGTTCYDHSWRLWDLEA 353
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q + + ++F TGG+D +VWDLR G M L+GH I G++
Sbjct: 354 QEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLN 413
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSPD-GSKV 291
SP+G ++ T D +WD+R Q +C+ + HQ NL+ + P+ G+ +
Sbjct: 414 FSPNGYHVATGSGDNTCKVWDLR----QRKCIYTIPAHQ-----NLVTGVKFEPNHGNFL 464
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G+ D IW L L GH G V +I +CS D+ L
Sbjct: 465 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKL 517
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 87/293 (29%), Positives = 146/293 (49%)
Query: 38 NGKQRTSSLESPIMLLTGHQSAVYTMKF--NPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
N K+ SL +L GH V ++ +P I S S D+ + +W+++ D + +
Sbjct: 4 NIKEAEISLRG--VLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEI 61
Query: 96 ------LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS--FVNS 147
L GH AI D+ ++DG +S S D ++R WD+ G+ I+ H S F S
Sbjct: 62 GTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVS 121
Query: 148 CCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ---ITAVSFSDASDK--IYTG 202
P R +VS S D T KLW+ + T D+ IT V FS + ++ I +
Sbjct: 122 FSPDNRQ---IVSASRDKTIKLWNTLAQ-CKYTITDQQHTDWITCVRFSPSPNQAIIVSC 177
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
G D VKVW+L+ +++ L+GH ++ +++SPDGS + G D +WD++ +
Sbjct: 178 GWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVK----EG 233
Query: 263 RCVKILE-GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+ + LE G N +L C +SP + A ++DR + IW+ S+ I+ ++
Sbjct: 234 KHLYSLETGSTIN---SL--C-FSPCDYWLCA-ATDRFIRIWNLESKLIISEI 279
Score = 189 (71.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 64/268 (23%), Positives = 122/268 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC-KNFMVLKGHKNAILDLHWTT 110
LTGH A+ + + G SGS D + LW + G+ ++F+ GH + + + ++
Sbjct: 68 LTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFI---GHTSDVFSVSFSP 124
Query: 111 DGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCCPSRRGP--PLVVSGSDDGTA 167
D QI+SAS DKT++ W+ + K +H ++ +C P ++VS D
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWI-TCVRFSPSPNQAIIVSCGWDKLV 183
Query: 168 KLWDMRQRGAIQTFPDKYQI-TAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
K+W+++ + + V+ S +GG D K+WD+++G+ +L+
Sbjct: 184 KVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGS 243
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLKCG-- 283
I + SP Y L D + IW++ +++ + I E + K + C
Sbjct: 244 T-INSLCFSPC-DYWLCAATDRFIRIWNL-----ESKLI-ISEIYPVKQSKIGVPWCTSL 295
Query: 284 -WSPDGSKVTAGSSDRMVYIWDTTSRRI 310
WS +G + GS+D +Y+++ +
Sbjct: 296 TWSANGQLLYCGSTDGNIYVYEVKKHSV 323
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 45/191 (23%), Positives = 86/191 (45%)
Query: 141 HNSFVNSCC-PSRRGPPLVVSGSDDGTAKLWDMR---QRGAIQTFPDKYQITAVSFSD-- 194
H+ +V S P+ +VS S D +W++ G I T + + +D
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS 79
Query: 195 -ASDKIY--TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC 251
+SD ++ +G D+ V++WDL GE + GH + +S SPD +++ D +
Sbjct: 80 ISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIK 139
Query: 252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311
+W+ +C + QH ++ SP+ + + + D++V +W+ + +
Sbjct: 140 LWNTLA-----QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 312 YKLPGHTGSVN 322
L GHTG +N
Sbjct: 195 KNLEGHTGVLN 205
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 87/293 (29%), Positives = 146/293 (49%)
Query: 38 NGKQRTSSLESPIMLLTGHQSAVYTMKF--NPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
N K+ SL +L GH V ++ +P I S S D+ + +W+++ D + +
Sbjct: 4 NIKEAEISLRG--VLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEI 61
Query: 96 ------LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS--FVNS 147
L GH AI D+ ++DG +S S D ++R WD+ G+ I+ H S F S
Sbjct: 62 GTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVS 121
Query: 148 CCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ---ITAVSFSDASDK--IYTG 202
P R +VS S D T KLW+ + T D+ IT V FS + ++ I +
Sbjct: 122 FSPDNRQ---IVSASRDKTIKLWNTLAQ-CKYTITDQQHTDWITCVRFSPSPNQAIIVSC 177
Query: 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262
G D VKVW+L+ +++ L+GH ++ +++SPDGS + G D +WD++ +
Sbjct: 178 GWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVK----EG 233
Query: 263 RCVKILE-GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+ + LE G N +L C +SP + A ++DR + IW+ S+ I+ ++
Sbjct: 234 KHLYSLETGSTIN---SL--C-FSPCDYWLCA-ATDRFIRIWNLESKLIISEI 279
Score = 189 (71.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 64/268 (23%), Positives = 122/268 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDC-KNFMVLKGHKNAILDLHWTT 110
LTGH A+ + + G SGS D + LW + G+ ++F+ GH + + + ++
Sbjct: 68 LTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFI---GHTSDVFSVSFSP 124
Query: 111 DGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCCPSRRGP--PLVVSGSDDGTA 167
D QI+SAS DKT++ W+ + K +H ++ +C P ++VS D
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWI-TCVRFSPSPNQAIIVSCGWDKLV 183
Query: 168 KLWDMRQRGAIQTFPDKYQI-TAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
K+W+++ + + V+ S +GG D K+WD+++G+ +L+
Sbjct: 184 KVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGS 243
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLKCG-- 283
I + SP Y L D + IW++ +++ + I E + K + C
Sbjct: 244 T-INSLCFSPC-DYWLCAATDRFIRIWNL-----ESKLI-ISEIYPVKQSKIGVPWCTSL 295
Query: 284 -WSPDGSKVTAGSSDRMVYIWDTTSRRI 310
WS +G + GS+D +Y+++ +
Sbjct: 296 TWSANGQLLYCGSTDGNIYVYEVKKHSV 323
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 45/191 (23%), Positives = 86/191 (45%)
Query: 141 HNSFVNSCC-PSRRGPPLVVSGSDDGTAKLWDMR---QRGAIQTFPDKYQITAVSFSD-- 194
H+ +V S P+ +VS S D +W++ G I T + + +D
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS 79
Query: 195 -ASDKIY--TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC 251
+SD ++ +G D+ V++WDL GE + GH + +S SPD +++ D +
Sbjct: 80 ISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIK 139
Query: 252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311
+W+ +C + QH ++ SP+ + + + D++V +W+ + +
Sbjct: 140 LWNTLA-----QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 312 YKLPGHTGSVN 322
L GHTG +N
Sbjct: 195 KNLEGHTGVLN 205
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 261 (96.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 53/219 (24%), Positives = 110/219 (50%)
Query: 131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITA 189
T +++++ H+S V+S + L+ +G +D +W + + I + +
Sbjct: 9 TSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGC 68
Query: 190 VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCK 249
+ F+ + +++ G + +++WDL ++ TL GH+ I+ + P G YL + +D
Sbjct: 69 IQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSN 128
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDTTSR 308
+ +WD+R + CV +GH ++C +SPDG + + S D V +WD +
Sbjct: 129 IKLWDVR----RKGCVFRYKGHTQ-----AVRCLAFSPDGKWLASASDDSTVKLWDLIAG 179
Query: 309 RILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+++ + HT +VN FH E ++ S S+D+ + L ++
Sbjct: 180 KMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 244 (91.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 67/257 (26%), Positives = 128/257 (49%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ + G ++A+G D + +W V +C M L GH +A+ + + +
Sbjct: 16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNC--IMSLTGHTSAVGCIQFNS 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
++++ S +LR WD+E K ++ + H + ++S G L SGS D KLW
Sbjct: 74 SEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLA-SGSVDSNIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + ++FS + + D+ VK+WDL G++ H +
Sbjct: 133 DVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAV 192
Query: 230 TGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ P+ YLL +G D + +WD+ + + EG + +++L ++PDG
Sbjct: 193 NVVQFHPN-EYLLASGSADRTVKLWDLEKF----NMIGSSEG-ETGVVRSVL---FNPDG 243
Query: 289 SKVTAGSSDRM-VYIWD 304
S + +GS + + VY W+
Sbjct: 244 SCLYSGSENTLRVYGWE 260
Score = 236 (88.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 66/220 (30%), Positives = 99/220 (45%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
IM LTGH SAV ++FN + + +GS + LW + K L GHK +I L +
Sbjct: 56 IMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA-AKILRTLMGHKASISSLDFH 114
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
G + S S D ++ WDV + + H V S G L S SDD T KL
Sbjct: 115 PMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLA-SASDDSTVKL 173
Query: 170 WDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ I F + V F + +G D VK+WDL K + + +G +
Sbjct: 174 WDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGV 233
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268
+ + +PDGS L + G + L ++ P +RC ++
Sbjct: 234 VRSVLFNPDGSCLYS-GSENTLRVYGWEP----DRCFDVV 268
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 59/177 (33%), Positives = 93/177 (52%)
Query: 38 NGKQRTSSLESPIMLLT--GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G R LE+ +L T GH++++ ++ F+P G +ASGS D +I LW V F
Sbjct: 84 SGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRY 143
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
KGH A+ L ++ DG + SAS D T++ WD+ GK I + H S VN
Sbjct: 144 -KGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVN-VVQFHPNE 201
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQIT-AVSFSDASDKIYTGGIDNDVKVW 211
L+ SGS D T KLWD+ + I + + + +V F+ +Y+G +N ++V+
Sbjct: 202 YLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257
Score = 221 (82.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 58/228 (25%), Positives = 105/228 (46%)
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+ G + + D + W V I + H S V C VV+GS G+ +L
Sbjct: 31 SSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVG-CIQFNSSEERVVAGSLSGSLRL 89
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ ++T K I+++ F + + +G +D+++K+WD+R+ +GH
Sbjct: 90 WDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQA 149
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ ++ SPDG +L + D + +WD+ A + I E H N+++ + P+
Sbjct: 150 VRCLAFSPDGKWLASASDDSTVKLWDL--IAGK----MITEFTSHTSAVNVVQ--FHPNE 201
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
+ +GS+DR V +WD ++ G TG V +F+ GSC
Sbjct: 202 YLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPD----GSC 245
>UNIPROTKB|F6XII0 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
GeneTree:ENSGT00390000004228 OMA:QFEGHTK Ensembl:ENSCAFT00000013108
EMBL:AAEX03001524 Uniprot:F6XII0
Length = 517
Score = 258 (95.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 56/213 (26%), Positives = 104/213 (48%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ PI + + Y F G ++ +GS D + L+ + G +GH A+ +
Sbjct: 70 QEPIKTFSRFKDTAYCATFRQDGKLLVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHTV 128
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ P L V+GS D T
Sbjct: 129 DFTADKYHVVSGADDYTVKLWDIPNSKEIVTFKEHSDYVRCGCASKLNPDLFVTGSYDHT 188
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R ++ + + +V + + + G VK+WD+ KG ++ ++L+ H
Sbjct: 189 VKMFDARTNQSVISVEHGQPVESVLLFPSGGLLASAG-GRYVKIWDMLKGGQLLVSLKNH 247
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+T + LS G LL+ +D K+ ++ Y
Sbjct: 248 HKTVTCLYLSSSGQRLLSGSLDRKVKVYSTTSY 280
Score = 173 (66.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 55/225 (24%), Positives = 102/225 (45%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++ S D ++ +D+ +++ H V++ VVSG+DD T KLW
Sbjct: 91 DGKLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV-DFTADKYHVVSGADDYTVKLW 149
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + D TG D+ VK++D R + ++++ H
Sbjct: 150 DIPNSKEIVTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNQSVISVE-HGQP 208
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L + G + IWDM + + L+ H H K + S G
Sbjct: 209 VESVLLFPSGGLLASAG-GRYVKIWDM---LKGGQLLVSLKNH-H---KTVTCLYLSSSG 260
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ +GS DR V ++ TTS ++++ ++ ++ H E ++
Sbjct: 261 QRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALAHEDETIV 305
>ZFIN|ZDB-GENE-030131-3831 [details] [associations]
symbol:utp15 "utp15, U3 small nucleolar
ribonucleoprotein, homolog" species:7955 "Danio rerio" [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-3831
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0045766 InterPro:IPR018391
SMART:SM00564 GO:GO:0006364 CTD:84135 GeneTree:ENSGT00390000004228
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 EMBL:AY398371 EMBL:BC045308 IPI:IPI00491201
RefSeq:NP_955998.1 UniGene:Dr.78694 ProteinModelPortal:Q7ZW33
STRING:Q7ZW33 Ensembl:ENSDART00000127397 Ensembl:ENSDART00000148774
GeneID:325106 KEGG:dre:325106 InParanoid:Q7ZW33 NextBio:20809122
Bgee:Q7ZW33 Uniprot:Q7ZW33
Length = 517
Score = 258 (95.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 71/260 (27%), Positives = 123/260 (47%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ PI T Y F G ++ +GS + I L+ + G + KGH A+
Sbjct: 70 QEPIRNFTRFHDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRV-SLRQFKGHSKAVHAT 128
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+ +DG +++S S D T R WDV + ++ + EH ++ + PS+ P + V+GS D T
Sbjct: 129 SFLSDGFRVLSGSDDLTCRVWDVASAVELSSITEHTDYIRAIAPSKLNPDVFVTGSYDHT 188
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVS-FSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQG 224
K++D+R ++ T + V + + + TGG VKVWDL KG + ++L+
Sbjct: 189 VKMFDVRSGNSVMTMQHGQPVECVLLYPSEALLVSTGG--RYVKVWDLLKGGQQLVSLKN 246
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE--KNLLKC 282
H +T LS LLT +D + ++ N K++ HNF+ ++L
Sbjct: 247 HHKTVTCACLSSSNK-LLTASLDRHVKVY--------NSSYKVV----HNFDCASSILSL 293
Query: 283 GWSPDGSKVTAGSSDRMVYI 302
+PD V G ++ ++ I
Sbjct: 294 AVAPDDEAVAVGMTNGVLSI 313
>UNIPROTKB|E2QVD0 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
Ensembl:ENSCAFT00000013108 Uniprot:E2QVD0
Length = 518
Score = 258 (95.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 56/213 (26%), Positives = 104/213 (48%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ PI + + Y F G ++ +GS D + L+ + G +GH A+ +
Sbjct: 70 QEPIKTFSRFKDTAYCATFRQDGKLLVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHTV 128
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ P L V+GS D T
Sbjct: 129 DFTADKYHVVSGADDYTVKLWDIPNSKEIVTFKEHSDYVRCGCASKLNPDLFVTGSYDHT 188
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R ++ + + +V + + + G VK+WD+ KG ++ ++L+ H
Sbjct: 189 VKMFDARTNQSVISVEHGQPVESVLLFPSGGLLASAG-GRYVKIWDMLKGGQLLVSLKNH 247
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+T + LS G LL+ +D K+ ++ Y
Sbjct: 248 HKTVTCLYLSSSGQRLLSGSLDRKVKVYSTTSY 280
Score = 173 (66.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 55/225 (24%), Positives = 102/225 (45%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++ S D ++ +D+ +++ H V++ VVSG+DD T KLW
Sbjct: 91 DGKLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV-DFTADKYHVVSGADDYTVKLW 149
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + D TG D+ VK++D R + ++++ H
Sbjct: 150 DIPNSKEIVTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNQSVISVE-HGQP 208
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L + G + IWDM + + L+ H H K + S G
Sbjct: 209 VESVLLFPSGGLLASAG-GRYVKIWDM---LKGGQLLVSLKNH-H---KTVTCLYLSSSG 260
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ +GS DR V ++ TTS ++++ ++ ++ H E ++
Sbjct: 261 QRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALAHEDETIV 305
>RGD|1310992 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310992 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:BC131851 IPI:IPI00360292 RefSeq:NP_001101117.1 UniGene:Rn.7959
ProteinModelPortal:A2RRU3 STRING:A2RRU3 PRIDE:A2RRU3
Ensembl:ENSRNOT00000022259 GeneID:310019 KEGG:rno:310019
UCSC:RGD:1310992 InParanoid:A2RRU3 NextBio:661554
ArrayExpress:A2RRU3 Genevestigator:A2RRU3 Uniprot:A2RRU3
Length = 528
Score = 258 (95.9 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 66/270 (24%), Positives = 122/270 (45%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ P+ + + Y F G ++ +GS D + L+ + G +GH A+ +
Sbjct: 70 QEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAP-LRQFEGHTKAVHTV 128
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ P L V+GS D T
Sbjct: 129 DFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHT 188
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R + + +V + + + G VKVWD+ KG ++ ++L+ H
Sbjct: 189 VKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQLLVSLKNH 247
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+T + LS G LL+ +D K+ I+ Y K++ H ++ ++L S
Sbjct: 248 HKTVTCLCLSSSGQRLLSGSLDRKVKIYSTTSY-------KVV--HSFDYAASILSLALS 298
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315
V G ++ ++ + S LP
Sbjct: 299 HQDETVVVGMTNGILSVKHRKSEAKKESLP 328
Score = 175 (66.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 57/225 (25%), Positives = 102/225 (45%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++ S D ++ +D+ +++ H V++ VVSG+DD T KLW
Sbjct: 91 DGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTV-DFTADKYHVVSGADDYTVKLW 149
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + D TG D+ VK++D R + + ++ H
Sbjct: 150 DIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVE-HGQP 208
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L++ G + +WDM + + L+ H H L C S G
Sbjct: 209 VESVLLFPSGGLLVSAG-GRYVKVWDM---LKGGQLLVSLKNH-HKTVTCL--C-LSSSG 260
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
++ +GS DR V I+ TTS ++++ ++ ++ H E V+
Sbjct: 261 QRLLSGSLDRKVKIYSTTSYKVVHSFDYAASILSLALSHQDETVV 305
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 76/299 (25%), Positives = 148/299 (49%)
Query: 56 HQSAVYTMKFNPA---GT-VIASGSHDRDIFLWHVHGDCKNFM-VLKGHKNAILDLHWTT 110
H+ A++T + + G+ I +GS D + +W + L+GH+ ++ ++ +
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ 74
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKM--AEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+G+ S+S D +R WD+ETGKQIK M +++ + P + + +GS G
Sbjct: 75 NGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSK---YIATGSHLGKVN 131
Query: 169 LWDM---RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
++ + ++ ++ T K+ I ++++S + +G ID + ++D+ G++ TL+GH
Sbjct: 132 IFGVESGKKEHSLDT-RGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
I ++ SPD L+T D + I+D++ +A L GH +L +S
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HA---NLAGTLSGHG----SWVLSVAFS 241
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
PD + + SSD+ + +WDT+SR + H V ++ T I S D+ I++
Sbjct: 242 PDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHI 300
Score = 226 (84.6 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 66/257 (25%), Positives = 114/257 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT-- 110
L GHQ V ++ + G + AS S D I LW D + +K +D WT
Sbjct: 60 LEGHQLGVVSVNISQNGAIAASSSLDAHIRLW----DLETGKQIKSMDAGPVDA-WTVAF 114
Query: 111 --DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
D I + S + + VE+GK+ + F+ S S G L SG+ DG
Sbjct: 115 SPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLA-SGAIDGIIN 173
Query: 169 LWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
++D+ + T I +++FS S + T D +K++D++ ++ TL GH
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGS 233
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ ++ SPD ++ +++ D + +WD CV HQ + ++P
Sbjct: 234 WVLSVAFSPDDTHFVSSSSDKSIKVWD----TSSRSCVNTFFDHQDQ----VWSVKYNPT 285
Query: 288 GSKVTAGSSDRMVYIWD 304
GSK+ + DR ++I+D
Sbjct: 286 GSKIVSAGDDRAIHIYD 302
Score = 142 (55.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 45/198 (22%), Positives = 93/198 (46%)
Query: 154 GPPLVVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIY--TGGIDNDVKV 210
G +V+GS D K+W ++ +Q + +Q+ VS + + + + +D +++
Sbjct: 31 GSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRL 90
Query: 211 WDLRKGEVSMTLQ-GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
WDL G+ ++ G D T ++ SPD Y+ T K+ I+ + ++ L+
Sbjct: 91 WDLETGKQIKSMDAGPVDAWT-VAFSPDSKYIATGSHLGKVNIFGVESGKKEHS----LD 145
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT 329
K +L +SPDG + +G+ D ++ I+D + ++L+ L GH + F
Sbjct: 146 TRG----KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 201
Query: 330 EPVIGSCSSDKQIYLGEI 347
++ + S D I + ++
Sbjct: 202 SQLLVTASDDGYIKIYDV 219
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 259 (96.2 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 83/295 (28%), Positives = 131/295 (44%)
Query: 35 PGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNF 93
P P + + I + H V ++F+P ++A+G DR + LW V GD C+
Sbjct: 300 PHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPK 359
Query: 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRR 153
L G I + + + GS +++AS D R W V+ + + H+ V S
Sbjct: 360 GSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSA-KFLL 418
Query: 154 GPPLVVSGSDDGTAKLWDMRQRGA-IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD 212
+VSGS D T KLWD+R + I+T + ++ + +G D ++ WD
Sbjct: 419 DNARIVSGSHDRTLKLWDLRSKVCNIKTVFAGSSCNDIVCTEQC--VMSGHFDKKIRFWD 476
Query: 213 LRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
+R + L+ IT + L+ + + LLT D L I D+R A VK
Sbjct: 477 IRTESIVKELE-LLGRITALDLNSERTELLTCSRDDLLKIIDLRVGA-----VK------ 524
Query: 273 HNFEKNLLKCG--W-----SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGS 320
F KCG W SPDG+ V AGS+D +Y+W+ + ++ L H S
Sbjct: 525 QTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSS 579
Score = 228 (85.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 67/256 (26%), Positives = 120/256 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L+G + + +++F+ AG+ + + S+D +W V D + L GH +L + D
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD-DNRLRHTLTGHSGKVLSAKFLLDN 420
Query: 113 SQIISASPDKTLRAWDVETGK-QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
++I+S S D+TL+ WD+ + IK + +S + C + V+SG D + WD
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCNIKTVFAGSSCNDIVCTEQ----CVMSGHFDKKIRFWD 476
Query: 172 MRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL--QGHQ--D 227
+R ++ +ITA+ + ++ T D+ +K+ DLR G V T QG +
Sbjct: 477 IRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGS 536
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
T + SPDG+Y+ D L +W++ + + L H H+ N + WSP
Sbjct: 537 DWTRVVFSPDGNYVAAGSADGALYVWNVLT----GKLERTLAKH-HSSPINAV--AWSPA 589
Query: 288 GSKVTAGSSDRMVYIW 303
G+ V + +W
Sbjct: 590 GAHVVSVDKGNKAVLW 605
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 257 (95.5 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 63/220 (28%), Positives = 101/220 (45%)
Query: 38 NGKQRTSSLES--PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G + SL+S P+ + GH V + ++P+G + + +DR LW + + +
Sbjct: 301 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ-EEILH 359
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
+GH + D+ + DGS + D R WD+ TG+ I + H + S G
Sbjct: 360 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGY 419
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDA-SDKIYTGGIDNDVKVWDL 213
+ +GS D T K+WD+RQR + T P +T V F D + TG DN K+W
Sbjct: 420 H-IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTH 478
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
TL GH+ + G+ +S DG + T D +W
Sbjct: 479 PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 254 (94.5 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 75/261 (28%), Positives = 116/261 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
L GH + V + F+P TV +AS + D + LW + D + ++GH +
Sbjct: 268 LRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSD-EPVADIEGHTVRVA 326
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
+ W G + + D++ R WD+E ++I H+ V + G L +G D
Sbjct: 327 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLD 385
Query: 165 GTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
++WD+R I +I +SFS I TG DN KVWDLR+ T+
Sbjct: 386 AFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIP 445
Query: 224 GHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
HQ+++TG+ P G +LLT D IW ++P +K L GH E ++
Sbjct: 446 AHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSP----LKTLAGH----EGKVMGL 497
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
S DG + S DR +W
Sbjct: 498 DISSDGQLIATCSYDRTFKLW 518
Score = 220 (82.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 77/293 (26%), Positives = 123/293 (41%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDGS------QII 116
F+P ++A+ LW V DC L+GH + + H + S +
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVP-DCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 296
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMR- 173
S + D +++ W +++ + + + H V PS R + + D + +LWD+
Sbjct: 297 SCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR---FLGTTCYDRSWRLWDLEA 353
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q + + ++F TGG+D +VWDLR G M L+GH I G+S
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIS 413
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSP-DGSKV 291
SP+G ++ T D +WD+R Q RCV + HQ NL+ + P G +
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLR----QRRCVYTIPAHQ-----NLVTGVKFEPIHGDFL 464
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G+ D IW L L GH G V + +I +CS D+ L
Sbjct: 465 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Score = 198 (74.8 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 61/251 (24%), Positives = 101/251 (40%)
Query: 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC-- 149
NF G I H++ + + +A + W V + + HN+ V +
Sbjct: 222 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFH 281
Query: 150 PSR-----RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGG 203
P + + S + DG+ KLW + + ++ V + + + T
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 341
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D ++WDL E + +GH + ++ DGS T G+D +WD+R R
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT----GR 397
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
C+ LEGH K + +SP+G + GS D +WD RR +Y +P H V
Sbjct: 398 CIMFLEGHL----KEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTG 453
Query: 324 SVFHATEPVIG 334
F EP+ G
Sbjct: 454 VKF---EPIHG 461
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 75/278 (26%), Positives = 126/278 (45%)
Query: 72 IASGSHDRDIFLWHVHGD--CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV 129
+ +G D + +W + D K LKGH ++ + ++DG I S+S D T+ WD
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 130 ETG--KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP---DK 184
+G K + + + P + V+SG +DG ++ + A QT K
Sbjct: 115 RSGDKKHLLSFGPVDLWTVQFSPCNK---YVISGLNDGKISMYSVETGKAEQTLDAQNGK 171
Query: 185 YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTN 244
Y ++ +++S I +G ID + ++D+ G+V TL+GH + + SP+ LLT
Sbjct: 172 YTLS-IAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTA 230
Query: 245 GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
D + ++D+ + V L GH +L +S DG + SSD V IWD
Sbjct: 231 SDDGHMKLYDVT----HSDVVGTLSGHA----SWVLCVAFSEDGKHFASSSSDNSVKIWD 282
Query: 305 TTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
T+ R+ L+ HT V + + S S DK +
Sbjct: 283 TSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSL 320
Score = 203 (76.5 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 56/208 (26%), Positives = 95/208 (45%)
Query: 60 VYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISA 118
++T++F+P + SG +D I ++ V G + + + K L + ++ DG I S
Sbjct: 130 LWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYT-LSIAYSPDGKYIASG 188
Query: 119 SPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI 178
+ D + +DV GK ++ + H V S C S L+++ SDDG KL+D+ +
Sbjct: 189 AIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQ-LLLTASDDGHMKLYDVTHSDVV 247
Query: 179 QTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPD 237
T + V+FS+ + DN VK+WD + + T H D + G+ SP
Sbjct: 248 GTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPG 307
Query: 238 GSYLLTNGMDCKLCIWDMRPYAPQNRCV 265
+ + D L I+ Y P N V
Sbjct: 308 NDKVASASEDKSLNIY----YCPPNAIV 331
Score = 203 (76.5 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 66/257 (25%), Positives = 112/257 (43%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH V ++ + G IAS S D + LW K ++ G +DL WT
Sbjct: 81 LKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGP----VDL-WTVQF 135
Query: 113 SQ----IISASPDKTLRAWDVETGKQIKKM-AEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
S +IS D + + VETGK + + A++ + S S G + SG+ DG
Sbjct: 136 SPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGK-YIASGAIDGII 194
Query: 168 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
++D+ +QT + ++ FS S + T D +K++D+ +V TL GH
Sbjct: 195 TIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHA 254
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ ++ S DG + ++ D + IWD + +C+ H + +SP
Sbjct: 255 SWVLCVAFSEDGKHFASSSSDNSVKIWD----TSERKCLHTFAEHTDQ----VWGVRYSP 306
Query: 287 DGSKVTAGSSDRMVYIW 303
KV + S D+ + I+
Sbjct: 307 GNDKVASASEDKSLNIY 323
Score = 150 (57.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 47/196 (23%), Positives = 93/196 (47%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDK--YQITAVSFSDASD--KIYTGGIDNDVKVWD 212
LV G DD K+WD+++ ++ + + VS + +SD I + +D+ + +WD
Sbjct: 55 LVTGGLDD-LVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWD 113
Query: 213 LRKGEVSMTLQ-GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R G+ L G D+ T + SP Y+++ D K+ ++ + + + L+
Sbjct: 114 ARSGDKKHLLSFGPVDLWT-VQFSPCNKYVISGLNDGKISMYSVET----GKAEQTLDA- 167
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
Q+ K L +SPDG + +G+ D ++ I+D + +++ L GH V F
Sbjct: 168 QNG--KYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQ 225
Query: 332 VIGSCSSDKQIYLGEI 347
++ + S D + L ++
Sbjct: 226 LLLTASDDGHMKLYDV 241
Score = 122 (48.0 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHW 108
+ L GH V ++ F+P ++ + S D + L+ V H D L GH + +L + +
Sbjct: 205 VQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVG--TLSGHASWVLCVAF 262
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ DG S+S D +++ WD K + AEH V S G V S S+D +
Sbjct: 263 SEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSP-GNDKVASASEDKSLN 321
Query: 169 LW 170
++
Sbjct: 322 IY 323
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 197 DKIYTGGIDNDVKVWDLRKG---EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
D + TGG+D+ VKVWDL++ ++ L+GH + +++S DG + ++ +D +C+W
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 254 DMR 256
D R
Sbjct: 113 DAR 115
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 259 (96.2 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 59/204 (28%), Positives = 98/204 (48%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTD 111
L GH VY F P ++ S S D I LW + C + +GH + D+ +
Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSC--VVTYRGHVYPVWDVRFAPH 503
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G +S S DKT R W ++ + ++ H S V+ C V +GS D T +LWD
Sbjct: 504 GYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVD-CVQFHPNSNYVATGSSDRTVRLWD 562
Query: 172 MRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+++ K +++++FS + +G +D+++ +WDL G + TL H +T
Sbjct: 563 NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVT 622
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWD 254
++ S DG+ L G+D L +WD
Sbjct: 623 TITFSRDGTVLAAAGLDNNLTLWD 646
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLH 107
S ++ GH V+ ++F P G S S+D+ LW + + V GH + + +
Sbjct: 483 SCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSN-QALRVFVGHLSDVDCVQ 541
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ + + + + S D+T+R WD TG+ ++ M H V+S S G L SGS D
Sbjct: 542 FHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLA-SGSVDHNI 600
Query: 168 KLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK---GEVS--MT 221
+WD+ + T +T ++FS + G+DN++ +WD K +S +T
Sbjct: 601 IIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNHIT 660
Query: 222 LQGHQD 227
+ HQD
Sbjct: 661 VSHHQD 666
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 54/212 (25%), Positives = 88/212 (41%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L GH + + + + ++S S D T+R W + T + H V R P
Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGH---VYPVWDVRFAP 502
Query: 156 P--LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWD 212
VS S D TA+LW A++ F + V F S+ + TG D V++WD
Sbjct: 503 HGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWD 562
Query: 213 LRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
G+ + GH+ ++ ++ S G YL + +D + IWD+ V L H
Sbjct: 563 NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLS----NGSLVTTLLRHT 618
Query: 273 HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
+ +S DG+ + A D + +WD
Sbjct: 619 ----STVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 167 (63.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 43/153 (28%), Positives = 72/153 (47%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLW-HVHGDCKNFMVLKGHKNAILDLHW 108
+ + GH S V ++F+P +A+GS DR + LW ++ G M GHK ++ L +
Sbjct: 527 LRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMT--GHKGSVSSLAF 584
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ G + S S D + WD+ G + + H S V + SR G L +G D+
Sbjct: 585 SACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLT- 643
Query: 169 LWDMRQRGAIQTFPDKYQITAVSFSDASDK-IY 200
LWD + + + + IT D +D+ +Y
Sbjct: 644 LWDFHK--VTEDYISNH-ITVSHHQDENDEDVY 673
Score = 162 (62.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 48/227 (21%), Positives = 92/227 (40%)
Query: 119 SPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI 178
S D +R D +G+ + + H V C + L++S S+D T +LW + +
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPE-MNLLLSCSEDSTIRLWSLLTWSCV 485
Query: 179 QTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPD 237
T+ Y + V F+ + D ++W + GH + + P+
Sbjct: 486 VTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPN 545
Query: 238 GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD 297
+Y+ T D + +WD + V+++ GH+ + +S G + +GS D
Sbjct: 546 SNYVATGSSDRTVRLWDNMT----GQSVRLMTGHKGSVSS----LAFSACGRYLASGSVD 597
Query: 298 RMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
+ IWD ++ ++ L HT +V F V+ + D + L
Sbjct: 598 HNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTL 644
Score = 143 (55.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 36/144 (25%), Positives = 67/144 (46%)
Query: 205 DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC 264
D+ +++W L +T +GH + + +P G Y ++ D +W N+
Sbjct: 471 DSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWA----TDSNQA 526
Query: 265 VKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
+++ GH + + C + P+ + V GSSDR V +WD + + + + GH GSV+
Sbjct: 527 LRVFVGHLSDVD-----CVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSS 581
Query: 324 SVFHATEPVIGSCSSDKQIYLGEI 347
F A + S S D I + ++
Sbjct: 582 LAFSACGRYLASGSVDHNIIIWDL 605
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 43/198 (21%), Positives = 85/198 (42%)
Query: 147 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDN 206
+C ++ G D + ++W + ++T D +D+ ++ D
Sbjct: 381 TCAEISDDSTMLACGFGDSSVRIWSLTP-AKLRTLKD---------ADSLRELDKESADI 430
Query: 207 DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 266
+V++ D R GEV+ +L GH + + +P+ + LL+ D + +W + ++ CV
Sbjct: 431 NVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWS----CVV 486
Query: 267 ILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVF 326
GH + + ++P G + S D+ +W T S + L GH V+ F
Sbjct: 487 TYRGHVYP----VWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQF 542
Query: 327 HATEPVIGSCSSDKQIYL 344
H + + SSD+ + L
Sbjct: 543 HPNSNYVATGSSDRTVRL 560
Score = 48 (22.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL 213
D T + +Q +T SD S + G D+ V++W L
Sbjct: 363 DQLPSAVFYTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSL 406
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 71/263 (26%), Positives = 124/263 (47%)
Query: 46 LESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAIL 104
LE+ L + + + +K+N G + + ++R + LW+V G C + GH + IL
Sbjct: 3 LEAKTKLSSKAKEPINVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYA--GHGHEIL 60
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
DL D ++ S DK ++ WDV TGK +++ H + +N+ ++ SGS D
Sbjct: 61 DLDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTI-RYNEDSSILASGSFD 119
Query: 165 GTAKLWDMRQRG--AIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
+LWD R IQ D K ++++ A I TG D ++ +D+RKG +S
Sbjct: 120 SKVRLWDCRSNSFSPIQVLADAKDSVSSIDI--AEHLIVTGSTDGTLRTYDIRKGTLSSD 177
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
H IT + S S+ L + ++ + + D + +K G + N E + +
Sbjct: 178 YFSHP--ITSVKTSKSASFSLISSLNSSIHLLDQET----GKILKSYIGLK-NMEYRV-R 229
Query: 282 CGWSPDGSKVTAGSSDRMVYIWD 304
++ + V +GS D VY+WD
Sbjct: 230 SSFNQSETIVFSGSEDGKVYLWD 252
Score = 130 (50.8 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 43/190 (22%), Positives = 89/190 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-FMVLKGHKNAILDLHWTTD 111
L GH + + T+++N +++ASGS D + LW + + VL K+++ +
Sbjct: 94 LGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSSIDIAEH 153
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
I++ S D TLR +D+ G H + S S+ ++S S + + L D
Sbjct: 154 --LIVTGSTDGTLRTYDIRKGTLSSDYFSHP--ITSVKTSKSASFSLIS-SLNSSIHLLD 208
Query: 172 MRQRGAIQTFPD----KYQITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTLQGHQ 226
++++ +Y++ + SF+ + +++G D V +WDL + +++ T
Sbjct: 209 QETGKILKSYIGLKNMEYRVRS-SFNQSETIVFSGSEDGKVYLWDLENETQITSTSVVGT 267
Query: 227 DMITGMSLSP 236
++T +S P
Sbjct: 268 PIVTDISCHP 277
Score = 112 (44.5 bits), Expect = 0.00085, P = 0.00085
Identities = 50/254 (19%), Positives = 106/254 (41%)
Query: 100 KNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
K I + + G +++A ++ +R W+V++G I + A H +
Sbjct: 14 KEPINVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFAS 73
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGE 217
G D ++WD+ G + + QI + +++ S + +G D+ V++WD R
Sbjct: 74 CGGDK-FIQVWDVNT-GKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNS 131
Query: 218 VS--MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
S L +D ++ + ++ ++T D L +D+R L +
Sbjct: 132 FSPIQVLADAKDSVSSIDIAEH--LIVTGSTDGTLRTYDIRKGT--------LSSDYFSH 181
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE--SVFHATEPVI 333
+K S S +++ +S +++ D + +IL G S F+ +E ++
Sbjct: 182 PITSVKTSKSASFSLISSLNSS--IHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIV 239
Query: 334 GSCSSDKQIYLGEI 347
S S D ++YL ++
Sbjct: 240 FSGSEDGKVYLWDL 253
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 257 (95.5 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 81/278 (29%), Positives = 128/278 (46%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQ 114
H V ++F+P ++A+G DR + LW GD C+ L G I + + + G+
Sbjct: 321 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAY 380
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
+++AS D R W V+ + + H+ V S +VSGS D T KLWD+R
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSA-KFLLDNARIVSGSHDRTLKLWDLRS 439
Query: 175 RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV--SMTLQGHQDMITGM 232
+ I+T + ++ + +G D ++ WD+R V M L G IT +
Sbjct: 440 KVCIKTVFAGSSCNDIVCTEQC--VMSGHFDKKIRFWDIRSESVVREMELLGK---ITAL 494
Query: 233 SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG--W-----S 285
L+P+ + LL+ D L + D+R A VK F KCG W S
Sbjct: 495 DLNPERTELLSCSRDDLLKVIDLRTNA-----VK------QTFSAPGFKCGSDWTRVVFS 543
Query: 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPG-HTGSVN 322
PDGS V AGS++ +Y+W + ++ L H+ S+N
Sbjct: 544 PDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSIN 581
Score = 223 (83.6 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 66/256 (25%), Positives = 117/256 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L+G + + +++F+ AG + + S+D +W V D + L GH +L + D
Sbjct: 362 LSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVD-DYRLRHTLTGHSGKVLSAKFLLDN 420
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++I+S S D+TL+ WD+ + IK + +S + C + V+SG D + WD+
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQ----CVMSGHFDKKIRFWDI 476
Query: 173 RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ--GHQ---D 227
R ++ +ITA+ + ++ + D+ +KV DLR V T G + D
Sbjct: 477 RSESVVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSD 536
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
T + SPDGSY+ + L +W + + K+L QH+ N + W+P
Sbjct: 537 W-TRVVFSPDGSYVAAGSAEGSLYVWSVLT----GKVEKVLS-KQHSSSINAV--AWAPS 588
Query: 288 GSKVTAGSSDRMVYIW 303
G V + +W
Sbjct: 589 GLHVVSVDKGSRAVLW 604
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 256 (95.2 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 61/218 (27%), Positives = 105/218 (48%)
Query: 40 KQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGH 99
++ S + + +L GH VY+ +F + + S S D I W + N ++ +GH
Sbjct: 325 EEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRS-FTNTVLYQGH 383
Query: 100 KNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
+ DL + SAS D+T R W + ++ A H V+ C +
Sbjct: 384 AYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVD-CVKFHPNSNYLA 442
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
+GS D T +LW +Q +++ F + + A++FS + + G D +K+WDL G +
Sbjct: 443 TGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 219 SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
L+GH D IT ++ SPD S + + MD + +WD+R
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 48/183 (26%), Positives = 78/183 (42%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
+L GH V+ + +P AS SHDR LW + GH + + +
Sbjct: 378 VLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYP-LRIYAGHLLDVDCVKFHP 436
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
+ + + + S DKT+R W + G ++ H V + S G L +G D KLW
Sbjct: 437 NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQ-RLKLW 495
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+ + IT+++FS S I + +DN V+VWD+R + G +
Sbjct: 496 DLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSEL 555
Query: 230 TGM 232
G+
Sbjct: 556 VGV 558
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 41/191 (21%), Positives = 80/191 (41%)
Query: 158 VVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++S S+D + + WD+R + Y + + S S + D ++W +
Sbjct: 357 LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRT 416
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276
GH + + P+ +YL T D + +W + Q V++ GH+
Sbjct: 417 YPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQ----QGNSVRLFTGHRGP-- 470
Query: 277 KNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
+L +SP+G + + D+ + +WD S + +L GHT ++ F +I S
Sbjct: 471 --VLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASA 528
Query: 337 SSDKQIYLGEI 347
S D + + +I
Sbjct: 529 SMDNSVRVWDI 539
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 255 (94.8 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 89/304 (29%), Positives = 136/304 (44%)
Query: 53 LTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFM-VLKGHKNAILDLHWTT 110
+ GH S + F P + + +G+ D +W D + M LKGH N +L + W+
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDC--DTQTPMHTLKGHYNWVLCVSWSP 196
Query: 111 DGSQIISASPDKTLRAWDVETGKQI-KKMAEHNSFVNSCC--PS---RRGP-PLVVSGSD 163
DG I + S D T+R WD ++G+ + + H+ ++ S P + G P + S S
Sbjct: 197 DGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSK 256
Query: 164 DGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMT 221
DGT K+WD R T ++ V + +Y+G D V+VWD+ +G
Sbjct: 257 DGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSGSHDRTVRVWDINSQGRCINI 315
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
L+ H + +SLS D Y L G +P P+ K LE N+EK K
Sbjct: 316 LKSHAHWVNHLSLSTD--YALRIGAFDHT---GKKPSTPEEAQKKALE----NYEKICKK 366
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT-SRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340
G S + VTA S D +++W+ S + + ++ GH VN F I S S D
Sbjct: 367 NGNSEE-MMVTA-SDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDN 424
Query: 341 QIYL 344
I L
Sbjct: 425 SIKL 428
Score = 252 (93.8 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 71/254 (27%), Positives = 124/254 (48%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
++GH ++V +K+ G ++ SGSHDR + +W ++ + +LK H + + L +TD
Sbjct: 274 MSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDY 332
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD- 171
+ I A D T + T ++ +K A N + C + ++V+ SDD T LW+
Sbjct: 333 ALRIGAF-DHTGKK--PSTPEEAQKKALEN-YEKICKKNGNSEEMMVTASDDYTMFLWNP 388
Query: 172 MRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
++ I + + V+FS I + DN +K+WD R G+ T +GH +
Sbjct: 389 LKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVY 448
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI-LEGHQHNFEKNLLKCGWSPDGS 289
++ S D L++ D L +WD+R R + + L GH+ + WS DG
Sbjct: 449 QVAWSSDCRLLVSCSKDTTLKVWDVR-----TRKLSVDLPGHKDE----VYTVDWSVDGK 499
Query: 290 KVTAGSSDRMVYIW 303
+V +G D+MV +W
Sbjct: 500 RVCSGGKDKMVRLW 513
Score = 235 (87.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 77/310 (24%), Positives = 136/310 (43%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
++P+ L GH + V + ++P G VIA+GS D I LW G C L+GH I
Sbjct: 176 QTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGD-ALRGHSKWITS 234
Query: 106 LHW-----TTDGSQ--IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLV 158
L W GS+ + S+S D T++ WD + M+ H + V+ C G L+
Sbjct: 235 LSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVS--CVKWGGQGLL 292
Query: 159 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASD-KIYTGGIDNDVKVWDLRKGE 217
SGS D T ++WD+ +G + S ++D + G D+ K +
Sbjct: 293 YSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEA 352
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
L+ ++ + S + ++T D + +W+ P + + + GHQ K
Sbjct: 353 QKKALENYEKICKKNGNSEE--MMVTASDDYTMFLWN--PLK-STKPIARMTGHQ----K 403
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+ +SPDG + + S D + +WD + + GH SV + + + ++ SCS
Sbjct: 404 LVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCS 463
Query: 338 SDKQIYLGEI 347
D + + ++
Sbjct: 464 KDTTLKVWDV 473
Score = 228 (85.3 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 72/302 (23%), Positives = 130/302 (43%)
Query: 53 LTGHQSAVYTMKFNPAGTV-------IASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAIL 104
L GH + ++ + P V +AS S D I +W V C+ M GH N++
Sbjct: 225 LRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTM--SGHTNSVS 282
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVET-GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSD 163
+ W G + S S D+T+R WD+ + G+ I + H +VN S + G+
Sbjct: 283 CVKWGGQGL-LYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRI--GAF 339
Query: 164 DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD-LRKGEVSMTL 222
D T K + + + Y+ ++ + + T D + +W+ L+ + +
Sbjct: 340 DHTGKKPSTPEEAQKKAL-ENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARM 398
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
GHQ ++ ++ SPDG Y+++ D + +WD R + + GH ++ +
Sbjct: 399 TGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGR----DGKFISTFRGHV----ASVYQV 450
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
WS D + + S D + +WD +R++ LPGH V + + S DK +
Sbjct: 451 AWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMV 510
Query: 343 YL 344
L
Sbjct: 511 RL 512
Score = 184 (69.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 52/160 (32%), Positives = 78/160 (48%)
Query: 196 SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255
S ++ TG DN ++WD TL+GH + + +S SPDG + T MD + +WD
Sbjct: 156 SSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWD- 214
Query: 256 RPYAPQNRCV-KILEGHQHNFEKNLLKCGWSP-----DGSK--VTAGSSDRMVYIWDTTS 307
P + Q C+ L GH K + W P GSK + + S D + IWDT S
Sbjct: 215 -PKSGQ--CLGDALRGHS----KWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVS 267
Query: 308 RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
R Y + GHT SV+ V + ++ S S D+ + + +I
Sbjct: 268 RVCQYTMSGHTNSVS-CVKWGGQGLLYSGSHDRTVRVWDI 306
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 255 (94.8 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 63/220 (28%), Positives = 101/220 (45%)
Query: 38 NGKQRTSSLES--PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G + SL+S P+ + GH V + ++P+G + + +DR LW + + +
Sbjct: 301 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ-EEILH 359
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
+GH + D+ + DGS + D R WD+ TG+ I + H + S G
Sbjct: 360 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 419
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDA-SDKIYTGGIDNDVKVWDL 213
+ +GS D T K+WD+RQR + T P +T V F D + TG DN K+W
Sbjct: 420 H-IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTH 478
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
TL GH+ + G+ +S DG + T D +W
Sbjct: 479 PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 251 (93.4 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 74/261 (28%), Positives = 116/261 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
L GH + V + F+P TV +AS + D + LW + D + ++GH +
Sbjct: 268 LRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSD-EPVADIEGHTVRVA 326
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
+ W G + + D++ R WD+E ++I H+ V + G L +G D
Sbjct: 327 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLD 385
Query: 165 GTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
++WD+R I +I ++FS I TG DN KVWDLR+ T+
Sbjct: 386 AFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIP 445
Query: 224 GHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
HQ+++TG+ P G +LLT D IW ++P +K L GH E ++
Sbjct: 446 AHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSP----LKTLAGH----EGKVMGL 497
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
S DG + S DR +W
Sbjct: 498 DISSDGQLIATCSYDRTFKLW 518
Score = 217 (81.4 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 76/293 (25%), Positives = 123/293 (41%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDGS------QII 116
F+P ++A+ LW V DC L+GH + + H + S +
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVP-DCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 296
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMR- 173
S + D +++ W +++ + + + H V PS R + + D + +LWD+
Sbjct: 297 SCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR---FLGTTCYDRSWRLWDLEA 353
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q + + ++F TGG+D +VWDLR G M L+GH I G++
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 413
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSP-DGSKV 291
SP+G ++ T D +WD+R Q RCV + HQ NL+ + P G +
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLR----QRRCVYTIPAHQ-----NLVTGVKFEPIHGDFL 464
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G+ D IW L L GH G V + +I +CS D+ L
Sbjct: 465 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Score = 198 (74.8 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 61/251 (24%), Positives = 101/251 (40%)
Query: 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC-- 149
NF G I H++ + + +A + W V + + HN+ V +
Sbjct: 222 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFH 281
Query: 150 PSR-----RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGG 203
P + + S + DG+ KLW + + ++ V + + + T
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 341
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D ++WDL E + +GH + ++ DGS T G+D +WD+R R
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT----GR 397
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
C+ LEGH K + +SP+G + GS D +WD RR +Y +P H V
Sbjct: 398 CIMFLEGHL----KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTG 453
Query: 324 SVFHATEPVIG 334
F EP+ G
Sbjct: 454 VKF---EPIHG 461
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 258 (95.9 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 57/211 (27%), Positives = 108/211 (51%)
Query: 134 QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSF 192
++++ H++ VN R+ ++V+G +D LW + + AI + + I +V+F
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF 67
Query: 193 SDASDKIYTGGI-DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC 251
DAS+ + G +K+WDL + ++ TL GH+ + P G + + +D L
Sbjct: 68 -DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311
IWD+R + C+ +GH N+L+ ++PDG V +G D +V +WD T+ ++L
Sbjct: 127 IWDIR----KKGCIHTYKGHTRGV--NVLR--FTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Query: 312 YKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ H G + FH E ++ + S+D+ +
Sbjct: 179 TEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Score = 240 (89.5 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 68/257 (26%), Positives = 117/257 (45%)
Query: 56 HQSAVYTMKFN-PAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
H +AV +K + V+ +G D + LW + G + L GH + I + T D S+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSV--TFDASE 71
Query: 115 IISAS--PDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP--PLVVSGSDDGTAKLW 170
++ A+ T++ WD+E K ++ + H S +C P SGS D K+W
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G I T+ + + + F+ + +GG DN VKVWDL G++ + H+ I
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQI 188
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDG 288
+ P L T D + WD+ + L G E ++C ++PDG
Sbjct: 189 QSLDFHPHEFLLATGSADRTVKFWDLETFE--------LIG-SGGPETAGVRCLSFNPDG 239
Query: 289 SKVTAGSSDRM-VYIWD 304
V G + + ++ W+
Sbjct: 240 KTVLCGLQESLKIFSWE 256
Score = 191 (72.3 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 57/209 (27%), Positives = 93/209 (44%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
I+ L GH S + ++ F+ + ++A+G+ I LW + + K L GH++ + + +
Sbjct: 52 ILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
G S S D L+ WD+ I H VN + G VVSG +D K+
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR-WVVSGGEDNIVKV 169
Query: 170 WDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
WD+ + F + QI ++ F + TG D VK WDL E+ +
Sbjct: 170 WDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAG 229
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRP 257
+ +S +PDG +L G+ L I+ P
Sbjct: 230 VRCLSFNPDGKTVLC-GLQESLKIFSWEP 257
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 256 (95.2 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 55/215 (25%), Positives = 108/215 (50%)
Query: 130 ETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-IT 188
+T +++++ H+S V+S + L+ +G DD +W + + + + I
Sbjct: 8 KTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIE 67
Query: 189 AVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC 248
++ S + I G ++VWDL ++ TL GH+ I + P GS++ + +D
Sbjct: 68 SLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDT 127
Query: 249 KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDTTS 307
+ +WD+R + C+ + H ++C +SPDG + + + D V +WD T+
Sbjct: 128 DIKLWDVR----RKGCIFKYKSHTQ-----AVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 308 RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+++++ GH+G VN FH +E ++ S SSD+ I
Sbjct: 179 GKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTI 213
Score = 235 (87.8 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 71/258 (27%), Positives = 118/258 (45%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ + G ++A+G D + +W V+ +C M L GH I L +
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNC--VMSLTGHTTPIESLQISA 73
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 74 KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDIKLW 132
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G I + Q + + FS + + D+ VK+WDL G+V GH +
Sbjct: 133 DVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPV 192
Query: 230 TGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG-WSPD 287
+ P YLL +G D + WD+ + V +E E ++C ++PD
Sbjct: 193 NVVEFHPS-EYLLASGSSDRTIRFWDLEKF----HVVSCIEE-----EATPVRCILFNPD 242
Query: 288 GSKVTAGSSDRM-VYIWD 304
G + G D + VY W+
Sbjct: 243 GCCLYGGFQDSLRVYGWE 260
Score = 203 (76.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/181 (29%), Positives = 90/181 (49%)
Query: 34 APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCK 91
A +G R LE+ +L T GH++ + ++ F+P G+ +ASGS D DI LW V
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGC 139
Query: 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPS 151
F K H A+ L ++ DG + SA+ D T++ WD+ GK + + H+ VN
Sbjct: 140 IFKY-KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVN-VVEF 197
Query: 152 RRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKV 210
L+ SGS D T + WD+ + + ++ + + F+ +Y GG + ++V
Sbjct: 198 HPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY-GGFQDSLRV 256
Query: 211 W 211
+
Sbjct: 257 Y 257
Score = 198 (74.8 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 61/227 (26%), Positives = 95/227 (41%)
Query: 45 SLESP--IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA 102
S+ P +M LTGH + + +++ + +I +GS I +W + K L GHK
Sbjct: 49 SVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA-AKILRTLLGHKAN 107
Query: 103 ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162
I L + GS + S S D ++ WDV I K H V S G L S +
Sbjct: 108 ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLA-SAA 166
Query: 163 DDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
DD T KLWD+ + F + V F + + +G D ++ WDL K V
Sbjct: 167 DDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSC 226
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268
++ + + +PDG L G L ++ P RC ++
Sbjct: 227 IEEEATPVRCILFNPDGCCLY-GGFQDSLRVYGWEP----ERCFDVV 268
Score = 144 (55.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 37/147 (25%), Positives = 64/147 (43%)
Query: 201 TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP 260
TGG D V VW + K M+L GH I + +S ++ + +WD+
Sbjct: 38 TGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA-- 95
Query: 261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGS 320
+ ++ L GH+ N+ + P GS V +GS D + +WD + ++K HT +
Sbjct: 96 --KILRTLLGHK----ANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQA 149
Query: 321 VNESVFHATEPVIGSCSSDKQIYLGEI 347
V F + S + D + L ++
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDL 176
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 255 (94.8 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 70/295 (23%), Positives = 132/295 (44%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHW 108
+M H++ + ++++P ++A+G DR + LW + + VL G I + +
Sbjct: 311 LMKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDF 370
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ G+ I+ S D R W V + + H+ V + + P VV+GS D T K
Sbjct: 371 DSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQE-PIKVVTGSHDRTLK 429
Query: 169 LWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLR-KGEVSMTLQGHQ 226
+WD+R I+T F V+ I +G D ++ WD+R + + L +
Sbjct: 430 IWDLRSIACIETKFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRTEKQADDVLMPAK 489
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
IT + LS D +YL+ + D + + D+R +N+ + + + ++
Sbjct: 490 --ITSLDLSKDCNYLICSVRDDTIKLLDLR----KNQVISTFTNEHFKISCDFARASFNS 543
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQ 341
G K+ GS+D +YIW+ + L GH+ +VN + ++ S +K+
Sbjct: 544 SGLKIACGSADGAIYIWNVNGF-LEATLKGHSTAVNAVSWSPNNNMLASVGKNKR 597
Score = 208 (78.3 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 66/207 (31%), Positives = 102/207 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTD 111
LTGH V K+ + +GSHDR + +W + C + K ++ DL TTD
Sbjct: 400 LTGHSGKVMAAKYVQEPIKVVTGSHDRTLKIWDLRSIAC---IETKFAGSSCNDLV-TTD 455
Query: 112 --GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
GS IIS DK +R WD+ T KQ + + S S+ L+ S DD T KL
Sbjct: 456 SLGSTIISGHYDKKIRFWDIRTEKQADDVLMPAK-ITSLDLSKDCNYLICSVRDD-TIKL 513
Query: 170 WDMRQRGAIQTFPDK-YQITA----VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG 224
D+R+ I TF ++ ++I+ SF+ + KI G D + +W++ G + TL+G
Sbjct: 514 LDLRKNQVISTFTNEHFKISCDFARASFNSSGLKIACGSADGAIYIWNVN-GFLEATLKG 572
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLC 251
H + +S SP+ + L + G + K C
Sbjct: 573 HSTAVNAVSWSPNNNMLASVGKN-KRC 598
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/256 (22%), Positives = 109/256 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
P +L+G + + ++ F+ G I S+D +W V D + L GH ++ +
Sbjct: 354 PRAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVM-DNRLRHTLTGHSGKVMAAKY 412
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIK-KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ ++++ S D+TL+ WD+ + I+ K A S N + ++SG D
Sbjct: 413 VQEPIKVVTGSHDRTLKIWDLRSIACIETKFA--GSSCNDLVTTDSLGSTIISGHYDKKI 470
Query: 168 KLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
+ WD+R +IT++ S + + D+ +K+ DLRK +V T
Sbjct: 471 RFWDIRTEKQADDVLMPAKITSLDLSKDCNYLICSVRDDTIKLLDLRKNQVISTFTNEHF 530
Query: 228 MIT----GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
I+ S + G + D + IW++ + L+GH + N +
Sbjct: 531 KISCDFARASFNSSGLKIACGSADGAIYIWNVNGFLEAT-----LKGH--STAVNAVS-- 581
Query: 284 WSPDGSKVTA-GSSDR 298
WSP+ + + + G + R
Sbjct: 582 WSPNNNMLASVGKNKR 597
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV-ETGKQIKKMAEHNSF-VNSC 148
K M + H+N + W+ + + D+ ++ WD+ + + + + +S +NS
Sbjct: 309 KILMKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSV 368
Query: 149 CPSRRGPPLVVSGSDDGTAKLW---DMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID 205
G ++ + +D G A++W D R R + K + A + K+ TG D
Sbjct: 369 DFDSTGAYILGTSNDYG-ARVWTVMDNRLRHTLTGHSGK--VMAAKYVQEPIKVVTGSHD 425
Query: 206 NDVKVWDLRKG---EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
+K+WDLR E D++T SL GS +++ D K+ WD+R
Sbjct: 426 RTLKIWDLRSIACIETKFAGSSCNDLVTTDSL---GSTIISGHYDKKIRFWDIR 476
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 255 (94.8 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 59/206 (28%), Positives = 101/206 (49%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L GH VY+ +F + + S S D I W + G N ++ +GH + DL +
Sbjct: 355 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDLDISPY 413
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
S S D+T R W + ++ A H + V+ C + +GS D T +LW
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVD-CVKFHPNSNYLATGSTDKTVRLWS 472
Query: 172 MRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+Q +++ F + + +++FS + + G D +K+WDL G + L+GH D IT
Sbjct: 473 AQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNIT 532
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMR 256
++ SPD S + + MD + +WD+R
Sbjct: 533 SLTFSPDSSLIASASMDNSVRVWDIR 558
Score = 224 (83.9 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 59/228 (25%), Positives = 98/228 (42%)
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
+L+GH + + D S ++S S D ++R WD+ + H V S
Sbjct: 355 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS 414
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDL 213
SGS D TA+LW + ++ + + V F S+ + TG D V++W
Sbjct: 415 L-YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 473
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
++G GH+ + ++ SP+G YL + G D +L +WD+ K L GH
Sbjct: 474 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA----SGTLYKELRGHTD 529
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
N + +SPD S + + S D V +WD + G +G +
Sbjct: 530 N----ITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGEL 573
Score = 205 (77.2 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 55/203 (27%), Positives = 85/203 (41%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
+L GH V+ + +P ASGSHDR LW + GH + + +
Sbjct: 396 VLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYP-LRIYAGHLADVDCVKFHP 454
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
+ + + + S DKT+R W + G ++ H V S S G L +G D KLW
Sbjct: 455 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ-RLKLW 513
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+ + IT+++FS S I + +DN V+VWD+R S G +
Sbjct: 514 DLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGEL 573
Query: 230 TGMSLSPDGSYLLTNGMDCKLCI 252
G+ + L M C L +
Sbjct: 574 VGVYTGQMSNVLSVQFMACNLLL 596
Score = 183 (69.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 45/151 (29%), Positives = 76/151 (50%)
Query: 28 PYSAPQAPGPNGKQRTSSLES-----PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIF 82
PYS A G + RT+ L S P+ + GH + V +KF+P +A+GS D+ +
Sbjct: 412 PYSLYFASGSH--DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 469
Query: 83 LWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
LW + + GH+ +L L ++ +G + SA D+ L+ WD+ +G K++ H
Sbjct: 470 LWSAQQG-NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 528
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
+ S S L+ S S D + ++WD+R
Sbjct: 529 DNITSLTFSPDSS-LIASASMDNSVRVWDIR 558
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 42/191 (21%), Positives = 80/191 (41%)
Query: 158 VVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++S S+D + + WD+ + Y + + S S +G D ++W +
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRT 434
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276
GH + + P+ +YL T D + +W A Q V++ GH+
Sbjct: 435 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS----AQQGNSVRLFTGHRGP-- 488
Query: 277 KNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
+L +SP+G + + D+ + +WD S + +L GHT ++ F +I S
Sbjct: 489 --VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASA 546
Query: 337 SSDKQIYLGEI 347
S D + + +I
Sbjct: 547 SMDNSVRVWDI 557
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 80/317 (25%), Positives = 135/317 (42%)
Query: 2 EVVTHQRENENALSTVSARP--MEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSA 59
++ T+ R ++ + + S + W V AP GP G+ P+ LTGH
Sbjct: 21 QIATYTRNDKTTVLSSSRDKTILVWD-VDSVAPVDEGPIGR--------PVRSLTGHNHF 71
Query: 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS 119
V + + G SGS D+ + LW ++ + H +L + ++ D QI+S S
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAFSADNRQIVSGS 130
Query: 120 PDKTLRAWDVETGKQIKKMAE---HNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDMRQ 174
DK+++ W+ T Q K H +V++ PS R P ++VS D K+W++
Sbjct: 131 RDKSIKLWN--TLAQCKYTITDDCHTDWVSTVRFSPSNRDP-VIVSAGWDKVVKVWNLGN 187
Query: 175 -RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
R + V+ S +GG D +WDL +G+ TL G+ D+I MS
Sbjct: 188 CRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMS 246
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL--EGHQHNFEKNLLKCGWSPDGSKV 291
SP+ Y L + + IWD+ + G + WS DG +
Sbjct: 247 FSPN-RYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTL 305
Query: 292 TAGSSDRMVYIWDTTSR 308
AG +D ++ ++ + R
Sbjct: 306 FAGYTDNIIRVYQVSIR 322
Score = 221 (82.9 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 90/318 (28%), Positives = 144/318 (45%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-------HGDC-KNFM 94
T +LE +T Q A YT N TV++S S D+ I +W V G +
Sbjct: 9 TGTLEGHTGWVT--QIATYTR--NDKTTVLSS-SRDKTILVWDVDSVAPVDEGPIGRPVR 63
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
L GH + + D+ ++DG +S S DKTLR WD+ G ++ H V S S
Sbjct: 64 SLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADN 123
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDAS-DK-IYTGGIDNDVKV 210
+VSGS D + KLW+ + D + ++ V FS ++ D I + G D VKV
Sbjct: 124 RQ-IVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKV 182
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
W+L + GH + +++SPDGS + G D + +WD+ + + + L G
Sbjct: 183 WNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLPG 238
Query: 271 HQHNFEKNLLKCGWSPDGSKVTA--GSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA 328
N N + +SP+ + A GSS + IWD ++ + +L S S +
Sbjct: 239 ---NDVINAMS--FSPNRYWLCAAVGSS---IKIWDLEDKKEIEELKPEIASSGSSRGSS 290
Query: 329 TEPVIGSCSSDKQ-IYLG 345
+ + + S D Q ++ G
Sbjct: 291 PQCISLAWSQDGQTLFAG 308
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 80/317 (25%), Positives = 135/317 (42%)
Query: 2 EVVTHQRENENALSTVSARP--MEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSA 59
++ T+ R ++ + + S + W V AP GP G+ P+ LTGH
Sbjct: 21 QIATYTRNDKTTVLSSSRDKTILVWD-VDSVAPVDEGPIGR--------PVRSLTGHNHF 71
Query: 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS 119
V + + G SGS D+ + LW ++ + H +L + ++ D QI+S S
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAFSADNRQIVSGS 130
Query: 120 PDKTLRAWDVETGKQIKKMAE---HNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDMRQ 174
DK+++ W+ T Q K H +V++ PS R P ++VS D K+W++
Sbjct: 131 RDKSIKLWN--TLAQCKYTITDDCHTDWVSTVRFSPSNRDP-VIVSAGWDKVVKVWNLGN 187
Query: 175 -RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
R + V+ S +GG D +WDL +G+ TL G+ D+I MS
Sbjct: 188 CRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMS 246
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL--EGHQHNFEKNLLKCGWSPDGSKV 291
SP+ Y L + + IWD+ + G + WS DG +
Sbjct: 247 FSPN-RYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTL 305
Query: 292 TAGSSDRMVYIWDTTSR 308
AG +D ++ ++ + R
Sbjct: 306 FAGYTDNIIRVYQVSIR 322
Score = 221 (82.9 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 90/318 (28%), Positives = 144/318 (45%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-------HGDC-KNFM 94
T +LE +T Q A YT N TV++S S D+ I +W V G +
Sbjct: 9 TGTLEGHTGWVT--QIATYTR--NDKTTVLSS-SRDKTILVWDVDSVAPVDEGPIGRPVR 63
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
L GH + + D+ ++DG +S S DKTLR WD+ G ++ H V S S
Sbjct: 64 SLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADN 123
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDAS-DK-IYTGGIDNDVKV 210
+VSGS D + KLW+ + D + ++ V FS ++ D I + G D VKV
Sbjct: 124 RQ-IVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKV 182
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
W+L + GH + +++SPDGS + G D + +WD+ + + + L G
Sbjct: 183 WNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLPG 238
Query: 271 HQHNFEKNLLKCGWSPDGSKVTA--GSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA 328
N N + +SP+ + A GSS + IWD ++ + +L S S +
Sbjct: 239 ---NDVINAMS--FSPNRYWLCAAVGSS---IKIWDLEDKKEIEELKPEIASSGSSRGSS 290
Query: 329 TEPVIGSCSSDKQ-IYLG 345
+ + + S D Q ++ G
Sbjct: 291 PQCISLAWSQDGQTLFAG 308
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 253 (94.1 bits), Expect = 6.6e-21, P = 6.6e-21
Identities = 71/291 (24%), Positives = 132/291 (45%)
Query: 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
TGH + ++F P G IA+ S D + LW+++ + H + + W+ G+
Sbjct: 15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLN-QAARCIRFASHSAPVNGVAWSPKGN 73
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
+ SA D+T++ W+ + + H+ V S G L+++ SDD +AK+W +
Sbjct: 74 LVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGH-LMLTASDDKSAKIWRVA 132
Query: 174 QRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGM 232
+R + +F + + + FS + T D V+++D+ GE T + +
Sbjct: 133 RRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQL 192
Query: 233 SLSPDGSYLLTNGMDC-KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
+ P G+ +L + C ++ I+D+ Q + ++ H+ N + P G +
Sbjct: 193 AWHPWGN-MLAVALGCNRIKIFDVS--GSQLLQLYVV----HSAPVN--DVAFHPSGHFL 243
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+GS DR + I D R +Y L GHT +VN F + SD+Q+
Sbjct: 244 LSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQL 294
Score = 192 (72.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 72/294 (24%), Positives = 134/294 (45%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA-ILDLHWTTDGSQ 114
H AV ++ F+ G ++ + S D+ +W V + F+ +N + ++ +G
Sbjct: 101 HSKAVRSVDFDSTGHLMLTASDDKSAKIWRVAR--RQFVSSFAQQNNWVRSAKFSPNGKL 158
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVS-GSDDGTAKLWDMR 173
+ +AS DK++R +DV++G+ ++ E + G L V+ G + K++D+
Sbjct: 159 VATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCN--RIKIFDVS 216
Query: 174 QRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGM 232
+Q + + V+F + + +G D +++ DL +G TL GH D + +
Sbjct: 217 GSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAV 276
Query: 233 SLSPDGSYLLTNGMDCKLCIW--DMRPY-APQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289
+ S DG T G D +L +W ++ Y A Q L + E + + S +GS
Sbjct: 277 AFSRDGDKFATGGSDRQLLVWQSNLHTYDASQFEAKSALASS--SCESSGVSSKQS-EGS 333
Query: 290 KVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP--VIGSCSSDKQ 341
T+ S+D + I S + Y+L V +S H+T+P V+G KQ
Sbjct: 334 S-TSKSNDLSIRIDPRQS--LAYQLSEENFQVLDSK-HSTQPEKVLGHGMDFKQ 383
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
+ L H + V + F+P+G + SGS DR I + + + + L GH +A+ + ++
Sbjct: 221 LQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLL-EGRPIYTLTGHTDAVNAVAFS 279
Query: 110 TDGSQIISASPDKTLRAW--DVET--GKQI--KKMAEHNSFVNSCCPSRRGPPLVVSGSD 163
DG + + D+ L W ++ T Q K +S +S S++ S S+
Sbjct: 280 RDGDKFATGGSDRQLLVWQSNLHTYDASQFEAKSALASSSCESSGVSSKQSEGSSTSKSN 339
Query: 164 DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID 205
D + ++ D RQ A Q + +Q+ S +K+ G+D
Sbjct: 340 DLSIRI-DPRQSLAYQLSEENFQVLDSKHSTQPEKVLGHGMD 380
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 261 (96.9 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 76/269 (28%), Positives = 123/269 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GD-CKNFMVLKGHKNAILDLHWTT 110
L GH + V +KF P G +A+GS DR + +W++ G+ C +F KGH ++ +
Sbjct: 1250 LEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSF---KGHTAPVVKVVVLM 1306
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKM-AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
D ++IS D L W +G ++ + + S S + R VS + D T K+
Sbjct: 1307 DSLRVISTDRDSMLLVWMAHSGNLLQTIQGPYKSL--SVTNNMR---FAVSTNGDNTLKI 1361
Query: 170 WDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
W + Q + +IT S S I +G D +KVW G++S L GH D +
Sbjct: 1362 WSLTQEDEKYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSDAV 1421
Query: 230 TGMSLS-PDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
T +++S + + +L+ D L +WD+ V L GH ++ S DG
Sbjct: 1422 TCVAVSVTNKTQVLSGSKDMNLILWDLLT----GEEVHTLAGHLGP----VIGVKVSADG 1473
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGH 317
S +GS D+ + +W+T L L H
Sbjct: 1474 STAVSGSDDKTLIVWETKRGLALTSLQMH 1502
Score = 176 (67.0 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 79/296 (26%), Positives = 126/296 (42%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK--NAIL--DLHW 108
+T H+ V + A V+ SG DR I +W D NF +L + +A+L D+ W
Sbjct: 1022 ITHHRGPVSGIVVAGACDVLISGGLDRTICVW----DLDNFTLLNTMQMTSAVLRIDISW 1077
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ +++ D L + TGK++ + H S + S + VV G DD A
Sbjct: 1078 NS--VFLLALCEDNALYVRTLATGKELHTLKGHKSKIRSISIGKDSQRCVV-GCDDTRAL 1134
Query: 169 LWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM------- 220
++DM +++ P + +TAV D D + T G N + + R E+ +
Sbjct: 1135 IYDMHAGKLVRSLPPNPGPVTAVHAMDNDDFLVTVG-GNKITFYSFRNEELYVNPYSRHP 1193
Query: 221 ----TLQGHQDM----------ITGMSLSPDGSYL-LTNGMDCKLCIWDMRPYAPQNRCV 265
+L+ H IT LS D + + +G L MR P+ +C
Sbjct: 1194 RRKRSLKRHAQAQRSPSTTLPPITCFDLSRDSQQMAIASGRHVHL----MRINTPEYQCT 1249
Query: 266 KILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
LEGH + LK ++P+G + GS DR+V+IW+ I GHT V
Sbjct: 1250 --LEGHTAGV--SCLK--FAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPV 1299
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 62/275 (22%), Positives = 114/275 (41%)
Query: 72 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131
IASG H + L ++ + L+GH + L + +G + + S D+ + W++
Sbjct: 1230 IASGRH---VHLMRINTP-EYQCTLEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLAL 1285
Query: 132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVS 191
G+ H + V V+S D +W +QT Y+ +V+
Sbjct: 1286 GEICNSFKGHTAPVVKVVVLMDSLR-VISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVT 1344
Query: 192 FSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC 251
++ + T G DN +K+W L + + ++ H D IT +S D ++++ D L
Sbjct: 1345 -NNMRFAVSTNG-DNTLKIWSLTQEDEKYSVS-HSDEITCFEISADSVHIISGSRDMSLK 1401
Query: 252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311
+W A + ++L GH + + ++V +GS D + +WD + +
Sbjct: 1402 VWQ----ATGGKLSQVLVGHSDAVTCVAVSV---TNKTQVLSGSKDMNLILWDLLTGEEV 1454
Query: 312 YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346
+ L GH G V A S S DK + + E
Sbjct: 1455 HTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVWE 1489
Score = 151 (58.2 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 48/206 (23%), Positives = 88/206 (42%)
Query: 52 LLTGHQSAVYTMKFNPAGT--VIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
+ GH +AV + P ++ +GS D + +WHV + + H I +
Sbjct: 934 IFKGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVGLRERRAHIKNAHTAPITGVAAG 993
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169
+ + IIS+S D ++ D+ +GK ++ H V+ + +++SG D T +
Sbjct: 994 ANNTLIISSSEDASIAITDLASGKLRHRITHHRGPVSGIVVAG-ACDVLISGGLDRTICV 1052
Query: 170 WDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
WD+ + T + + S S + DN + V L G+ TL+GH+ I
Sbjct: 1053 WDLDNFTLLNTMQMTSAVLRIDISWNSVFLLALCEDNALYVRTLATGKELHTLKGHKSKI 1112
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDM 255
+S+ D + D + I+DM
Sbjct: 1113 RSISIGKDSQRCVVGCDDTRALIYDM 1138
Score = 123 (48.4 bits), Expect = 0.00065, P = 0.00065
Identities = 44/240 (18%), Positives = 97/240 (40%)
Query: 108 WTTDGSQ-IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP-LVVSGSDDG 165
W Q +I A+ ++ W + + H + V + + L+++GS+D
Sbjct: 904 WLAPSKQHLILATSSGDVQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDA 963
Query: 166 TAKLWD--MRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
T +W +R+R A IT V+ + I + D + + DL G++ +
Sbjct: 964 TVLVWHVGLRERRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAITDLASGKLRHRIT 1023
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H+ ++G+ ++ L++ G+D +C+WD+ + +L Q +
Sbjct: 1024 HHRGPVSGIVVAGACDVLISGGLDRTICVWDLDNFT-------LLNTMQMTSAVLRIDIS 1076
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE-SVFHATEPVIGSCSSDKQI 342
W+ + A D +Y+ + + L+ L GH + S+ ++ + C + +
Sbjct: 1077 WN--SVFLLALCEDNALYVRTLATGKELHTLKGHKSKIRSISIGKDSQRCVVGCDDTRAL 1134
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 247 (92.0 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 80/257 (31%), Positives = 118/257 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ + L GH + + D +Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQ 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q H V S P R L VSG+ D +AKLWD+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR---LFVSGACDASAKLWDV 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R+ QTF + I A+ F + TG D +++DLR + MT H ++I G
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICG 272
Query: 232 M---SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
+ S S G LL D +WD +R +L GH N + C G + D
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDA---LKADRA-GVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 212 (79.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F ++ S S D LW + + GH ++ L D
Sbjct: 139 LAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDT 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WDV G + H S +N+ C G +GSDD T +L+D+
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + T+ D IT+VSFS + + G D + VWD K + + L GH + +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 209 (78.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 55/214 (25%), Positives = 99/214 (46%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPDKY----QITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ + ++ F D ++I T D +
Sbjct: 111 -YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SL+PD ++ D +WD+R + C + G
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H+ + N + C + P+G+ GS D ++D
Sbjct: 225 HESDI--NAI-C-FFPNGNAFATGSDDATCRLFD 254
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/188 (21%), Positives = 73/188 (38%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ D + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIET----GQQTTTFTGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ +PD +G+ D +WD GH +N F
Sbjct: 184 TGD----VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 247 (92.0 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 80/257 (31%), Positives = 118/257 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ + L GH + + D +Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQ 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q H V S P R L VSG+ D +AKLWD+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR---LFVSGACDASAKLWDV 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R+ QTF + I A+ F + TG D +++DLR + MT H ++I G
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICG 272
Query: 232 M---SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
+ S S G LL D +WD +R +L GH N + C G + D
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDA---LKADRA-GVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 212 (79.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F ++ S S D LW + + GH ++ L D
Sbjct: 139 LAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDT 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WDV G + H S +N+ C G +GSDD T +L+D+
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + T+ D IT+VSFS + + G D + VWD K + + L GH + +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 209 (78.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 55/214 (25%), Positives = 99/214 (46%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPDKY----QITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ + ++ F D ++I T D +
Sbjct: 111 -YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SL+PD ++ D +WD+R + C + G
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H+ + N + C + P+G+ GS D ++D
Sbjct: 225 HESDI--NAI-C-FFPNGNAFATGSDDATCRLFD 254
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/188 (21%), Positives = 73/188 (38%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ D + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIET----GQQTTTFTGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ +PD +G+ D +WD GH +N F
Sbjct: 184 TGD----VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 247 (92.0 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 80/257 (31%), Positives = 118/257 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ + L GH + + D +Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQ 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q H V S P R L VSG+ D +AKLWD+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR---LFVSGACDASAKLWDV 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R+ QTF + I A+ F + TG D +++DLR + MT H ++I G
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICG 272
Query: 232 M---SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
+ S S G LL D +WD +R +L GH N + C G + D
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDA---LKADRA-GVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 212 (79.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F ++ S S D LW + + GH ++ L D
Sbjct: 139 LAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDT 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WDV G + H S +N+ C G +GSDD T +L+D+
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + T+ D IT+VSFS + + G D + VWD K + + L GH + +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 209 (78.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 55/214 (25%), Positives = 99/214 (46%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPDKY----QITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ + ++ F D ++I T D +
Sbjct: 111 -YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SL+PD ++ D +WD+R + C + G
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H+ + N + C + P+G+ GS D ++D
Sbjct: 225 HESDI--NAI-C-FFPNGNAFATGSDDATCRLFD 254
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/188 (21%), Positives = 73/188 (38%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ D + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIET----GQQTTTFTGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ +PD +G+ D +WD GH +N F
Sbjct: 184 TGD----VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 247 (92.0 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 80/257 (31%), Positives = 118/257 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ + L GH + + D +Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQ 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q H V S P R L VSG+ D +AKLWD+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR---LFVSGACDASAKLWDV 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R+ QTF + I A+ F + TG D +++DLR + MT H ++I G
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICG 272
Query: 232 M---SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
+ S S G LL D +WD +R +L GH N + C G + D
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDA---LKADRA-GVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 212 (79.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F ++ S S D LW + + GH ++ L D
Sbjct: 139 LAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDT 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WDV G + H S +N+ C G +GSDD T +L+D+
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + T+ D IT+VSFS + + G D + VWD K + + L GH + +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 209 (78.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 55/214 (25%), Positives = 99/214 (46%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPDKY----QITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ + ++ F D ++I T D +
Sbjct: 111 -YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SL+PD ++ D +WD+R + C + G
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H+ + N + C + P+G+ GS D ++D
Sbjct: 225 HESDI--NAI-C-FFPNGNAFATGSDDATCRLFD 254
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/188 (21%), Positives = 73/188 (38%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ D + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIET----GQQTTTFTGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ +PD +G+ D +WD GH +N F
Sbjct: 184 TGD----VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 247 (92.0 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 80/257 (31%), Positives = 118/257 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ + L GH + + D +Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQ 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q H V S P R L VSG+ D +AKLWD+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR---LFVSGACDASAKLWDV 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R+ QTF + I A+ F + TG D +++DLR + MT H ++I G
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICG 272
Query: 232 M---SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
+ S S G LL D +WD +R +L GH N + C G + D
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDA---LKADRA-GVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 212 (79.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F ++ S S D LW + + GH ++ L D
Sbjct: 139 LAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDT 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WDV G + H S +N+ C G +GSDD T +L+D+
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + T+ D IT+VSFS + + G D + VWD K + + L GH + +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 209 (78.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 55/214 (25%), Positives = 99/214 (46%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPDKY----QITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ + ++ F D ++I T D +
Sbjct: 111 -YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SL+PD ++ D +WD+R + C + G
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H+ + N + C + P+G+ GS D ++D
Sbjct: 225 HESDI--NAI-C-FFPNGNAFATGSDDATCRLFD 254
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/188 (21%), Positives = 73/188 (38%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ D + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIET----GQQTTTFTGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ +PD +G+ D +WD GH +N F
Sbjct: 184 TGD----VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>UNIPROTKB|A7MB12 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006364 EMBL:BC151279 IPI:IPI00703711 RefSeq:NP_001094598.1
UniGene:Bt.13342 ProteinModelPortal:A7MB12 STRING:A7MB12
Ensembl:ENSBTAT00000036838 GeneID:526343 KEGG:bta:526343 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 InParanoid:A7MB12 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 NextBio:20874350 Uniprot:A7MB12
Length = 519
Score = 254 (94.5 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 56/213 (26%), Positives = 103/213 (48%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
+ PI + + Y F G ++ +GS D + L+ + G +GH A+ +
Sbjct: 70 QEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAP-LRQFEGHTKAVHSV 128
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+T D ++S + D T++ WD+ K+I EH+ +V C S+ L V+GS D T
Sbjct: 129 DFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNTDLFVTGSYDHT 188
Query: 167 AKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGH 225
K++D R ++ + + +V + + + G VKVWD+ KG ++ ++L+ H
Sbjct: 189 VKMFDARTNQSVISVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQLLVSLKNH 247
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
+T + LS G LL+ +D K+ ++ Y
Sbjct: 248 HKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSY 280
Score = 180 (68.4 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 58/226 (25%), Positives = 107/226 (47%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
DG +++ S D ++ +D+ +++ H V+S VVSG+DD T KLW
Sbjct: 91 DGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHSV-DFTADKYHVVSGADDYTVKLW 149
Query: 171 DMRQRGAIQTFPDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
D+ I TF + + +D TG D+ VK++D R + ++++ H
Sbjct: 150 DIPNSKEILTFKEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDARTNQSVISVE-HGQP 208
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ + L P G L++ G + +WDM + + L+ H H L C S G
Sbjct: 209 VESVLLFPSGGLLVSAG-GRYVKVWDM---LKGGQLLVSLKNH-HKTVTCL--C-LSSSG 260
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV-NESVFHATEPVI 333
++ +GS DR V ++ TTS ++++ +T S+ + ++ H E ++
Sbjct: 261 QRLLSGSLDRKVKVYSTTSYKVVHSFD-YTASILSLALAHEDETIV 305
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 135 IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFS 193
++++ H S V+S + L+ +G DD LW + + I + + +V +
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 194 DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
+ I G ++VWDL ++ TL GH+ I + P G ++ + D + +W
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDTTSRRILY 312
D+R + CV GH ++C +SPDG + + + D V +WD T+ +++
Sbjct: 137 DIR----RKGCVFRYRGHSQ-----AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 187
Query: 313 KLPGHTGSVNESVFHATE 330
+ PGHTG VN FH E
Sbjct: 188 EFPGHTGPVNVVEFHPNE 205
Score = 208 (78.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 53/193 (27%), Positives = 92/193 (47%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTT 110
+ H S V ++ A G ++A+G D + LW ++ +C M L GH + + + T
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNT 77
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
I++ S ++R WD+E K ++ + H + + S G V SGS D KLW
Sbjct: 78 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLW 136
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+R++G + + Q + + FS + + D+ VK+WDL G++ GH +
Sbjct: 137 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 196
Query: 230 TGMSLSPDGSYLL 242
+ P+ YLL
Sbjct: 197 NVVEFHPN-EYLL 208
Score = 167 (63.8 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 41/141 (29%), Positives = 71/141 (50%)
Query: 12 NALSTVSARPMEWSTVPYSAPQ----APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKF 65
N + +++ +V + P+ A +G R LE+ +L T GH++ + ++ F
Sbjct: 58 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 117
Query: 66 NPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
+P G +ASGS D +I LW + F +GH A+ L ++ DG + SA+ D T++
Sbjct: 118 HPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVK 176
Query: 126 AWDVETGKQIKKMAEHNSFVN 146
WD+ GK + + H VN
Sbjct: 177 LWDLTAGKMMSEFPGHTGPVN 197
Score = 139 (54.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/162 (21%), Positives = 72/162 (44%)
Query: 187 ITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG 245
++++ AS ++ TGG D V +W + K M+L GH + + L+ ++
Sbjct: 27 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 86
Query: 246 MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305
+ +WD+ + ++ L GH+ N+ + P G V +GS D + +WD
Sbjct: 87 QSGSIRVWDLEAA----KILRTLMGHK----ANICSLDFHPYGEFVASGSQDTNIKLWDI 138
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ +++ GH+ +V F + S + D + L ++
Sbjct: 139 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 180
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 225 HQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
H ++ + L G L T G DC++ +W + P C+ L GH E L
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINK--PN--CIMSLTGHTSPVESVRLN-- 76
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343
+P+ + AGS + +WD + +IL L GH ++ FH + S S D I
Sbjct: 77 -TPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 134
Query: 344 LGEI 347
L +I
Sbjct: 135 LWDI 138
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 81/272 (29%), Positives = 124/272 (45%)
Query: 53 LTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGD-CKNFMV----LKGHKNAILDL 106
L GH V + NP I S S D+ + +W + D N+ L GH + I D+
Sbjct: 11 LIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDV 70
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
++DG+ +S S D+TLR WD+ GK ++ H V S S +VSGS D T
Sbjct: 71 VLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQ-IVSGSRDKT 129
Query: 167 AKLWDMRQRGAIQTFPDKYQ--ITAVSFS-DASDKIYTG-GIDNDVKVWDLRKGEVSMTL 222
KLW+ D + ++ V FS + S+ I G D VKVW+L ++
Sbjct: 130 IKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNH 189
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
GH + +++SPDGS + G D K +WD+ + + LE HN N L C
Sbjct: 190 HGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLN----DGKNLYTLE---HNDIINAL-C 241
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + + IWD ++ + +L
Sbjct: 242 -FSPNRYWLCVAYGPS-IKIWDLACKKTVEEL 271
Score = 224 (83.9 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 68/265 (25%), Positives = 115/265 (43%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
P L GH + + + G SGS D+ + LW + K +GH +L + +
Sbjct: 56 PQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAG-KTTRRFEGHTKDVLSVAF 114
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAE-HNSFVNSCC---PSRRGPPLVVSGSDD 164
+ D QI+S S DKT++ W+ + + H +V SC P+ P ++VS D
Sbjct: 115 SADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWV-SCVRFSPNHSNP-IIVSCGWD 172
Query: 165 GTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
T K+W++ + + V+ S +GG D+ +WDL G+ TL+
Sbjct: 173 RTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE 232
Query: 224 GHQDMITGMSLSPDGSYL-LTNGMDCKLCIWDMR-PYAPQNRCVKILEGHQHNFEKNLLK 281
H D+I + SP+ +L + G K IWD+ + +++ + L
Sbjct: 233 -HNDIINALCFSPNRYWLCVAYGPSIK--IWDLACKKTVEELRPEVVSPTSKADQPQCLS 289
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG SD + +W +
Sbjct: 290 LAWSTDGQTLFAGYSDNTIRVWQVS 314
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/192 (22%), Positives = 83/192 (43%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM-RQRGAIQTFPDKYQITAVSF-SD---A 195
HN +V + + P ++S S D T +W + R +P K F SD +
Sbjct: 14 HNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLS 73
Query: 196 SDKIY--TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
SD Y +G D +++WDL G+ + +GH + ++ S D +++ D + +W
Sbjct: 74 SDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLW 133
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSK--VTAGSSDRMVYIWDTTSRRI 310
+ C ++ H + + C +SP+ S + + DR V +W+ + ++
Sbjct: 134 NTLA-----ECKFTIQEDGHT---DWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKL 185
Query: 311 LYKLPGHTGSVN 322
GH G +N
Sbjct: 186 KNNHHGHNGYLN 197
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 221 TLQGHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCV--KILEGHQHNFEK 277
TL GH +T ++ +P D +++ D L +W + N K L GH H
Sbjct: 10 TLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISD 69
Query: 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS 337
+L S DG+ +GS D+ + +WD + + + GHT V F A I S S
Sbjct: 70 VVL----SSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGS 125
Query: 338 SDKQIYL 344
DK I L
Sbjct: 126 RDKTIKL 132
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 83/302 (27%), Positives = 139/302 (46%)
Query: 51 MLLTGHQSAVYTMKF---NPAGTVIASGSHDRDIFLWHVHGDCKNFM-VLKGHKNAILDL 106
++ +GH V + F N G+ I S D L + G+ +++ +GHK A+
Sbjct: 5 LICSGHSRPVSDLSFSNENSDGSFIVSACLDGSPMLRN--GENGDWIGTFEGHKGAVWSS 62
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+ + SQ ++AS D T++ WD G +I + EH S V + S +V GS+
Sbjct: 63 RFNSTASQALTASADYTVKLWDTLNGSEILSI-EHQSIVKTADFSNNNSRVVTGGSEK-I 120
Query: 167 AKLWDMRQRG--AIQTFPDKYQITAVSFSDASDKIY-TGGIDNDVKVWDLRKG-EVSMTL 222
+++D+ + +Q I ++S +D I +GG+D +++WDLR G +VS+
Sbjct: 121 LRIFDLERPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLRSGTQVSLCA 180
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ IT M S D +L+T + ++ WD + + P L+ + F+ N
Sbjct: 181 KSS---ITSMEFSKDRRFLVTTAGN-EVTFWDAQSFYP-------LKVYSLPFDVNCASL 229
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
PD SK AG SD V+++D ++ + GH G VN F S S D I
Sbjct: 230 --HPDNSKFIAGGSDFWVHVYDFSTGNEIEVNKGHHGPVNCCRFSPDGASFASGSLDGTI 287
Query: 343 YL 344
L
Sbjct: 288 RL 289
Score = 210 (79.0 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 62/251 (24%), Positives = 118/251 (47%)
Query: 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
GH+ AV++ +FN + + S D + LW + + H++ + ++ + S+
Sbjct: 54 GHKGAVWSSRFNSTASQALTASADYTVKLWDTLNGSEILSI--EHQSIVKTADFSNNNSR 111
Query: 115 IISASPDKTLRAWDVETGKQ-IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
+++ +K LR +D+E + +++ H + + + S +V+SG D ++WD+R
Sbjct: 112 VVTGGSEKILRIFDLERPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLR 171
Query: 174 QRGAIQTFPDKYQITAVSFS-DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGM 232
G + K IT++ FS D + T G N+V WD + D +
Sbjct: 172 S-GTQVSLCAKSSITSMEFSKDRRFLVTTAG--NEVTFWDAQSFYPLKVYSLPFD-VNCA 227
Query: 233 SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292
SL PD S + G D + ++D ++ N +++ +GH H N C +SPDG+
Sbjct: 228 SLHPDNSKFIAGGSDFWVHVYD---FSTGNE-IEVNKGH-HG-PVNC--CRFSPDGASFA 279
Query: 293 AGSSDRMVYIW 303
+GS D + +W
Sbjct: 280 SGSLDGTIRLW 290
Score = 178 (67.7 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 48/210 (22%), Positives = 90/210 (42%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
+L +L HQS V T F+ + + +G ++ + ++ + + + GH N I
Sbjct: 85 TLNGSEILSIEHQSIVKTADFSNNNSRVVTGGSEKILRIFDLERPNDPLLQISGHTNTIK 144
Query: 105 DLHWTTDGSQII-SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSD 163
W+ I+ S D+ +R WD+ +G Q+ A+ S + S S+ LV + +
Sbjct: 145 TATWSVHNDDIVLSGGLDEVIRIWDLRSGTQVSLCAK--SSITSMEFSKDRRFLVTTAGN 202
Query: 164 DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
+ T WD + ++ + + + S + K GG D V V+D G +
Sbjct: 203 EVT--FWDAQSFYPLKVYSLPFDVNCASLHPDNSKFIAGGSDFWVHVYDFSTGNEIEVNK 260
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
GH + SPDG+ + +D + +W
Sbjct: 261 GHHGPVNCCRFSPDGASFASGSLDGTIRLW 290
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 232 (86.7 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 68/256 (26%), Positives = 115/256 (44%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
+ L GH V ++F P+G + S S D+ I +W G C +V GH++ + +
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLV--GHEDWVRKITV 240
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ DGS I S S D+T++ W++ G+ + EH S V C + + GS T +
Sbjct: 241 SEDGSCIASCSNDQTIKTWNIVKGECLATYREH-SHVVECLAFSTANIIDIPGSLLSTPE 299
Query: 169 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
+ ++ P + + + TG D +K+W+L G T GH +
Sbjct: 300 -----GKSKVKQGPGGNLVGQCGY------LATGSRDKTIKIWELATGRCLATYIGHDNW 348
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL-EGHQHNFEKNLLKCGWSPD 287
+ + P G +LL+ G D + +WD+ Q RC+K + E H H F L C +P
Sbjct: 349 VRAVRFHPCGKFLLSVGDDKTIRVWDIA----QGRCIKTINEAHTH-FISCLDFCLHNPH 403
Query: 288 GSKVTAGSSDRMVYIW 303
+ G D ++ +W
Sbjct: 404 ---IATGGVDDVIKVW 416
Score = 228 (85.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 56/204 (27%), Positives = 102/204 (50%)
Query: 36 GPNGKQRTSSLESPIM--LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKN 92
G G+ + +L P +LTGH++ + ++KF+P+ +++ S S D I +W G+ +
Sbjct: 83 GGRGRGKEDALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFER 142
Query: 93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSR 152
LKGH NA+ D+ + G+ + S S D T++ WD +T +K + H+ V SC
Sbjct: 143 --TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNV-SCVRFT 199
Query: 153 RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVW 211
++S S D T K+W+ I+T + ++ S+ I + D +K W
Sbjct: 200 PSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Query: 212 DLRKGEVSMTLQGHQDMITGMSLS 235
++ KGE T + H ++ ++ S
Sbjct: 260 NIVKGECLATYREHSHVVECLAFS 283
Score = 223 (83.6 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 51/183 (27%), Positives = 91/183 (49%)
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
+L GH+N I + + S ++SAS D T++ WD E+G+ + + H + V + G
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDL 213
L+ S S D T KLWD + ++T + ++ V F+ + D++ + D +KVW+
Sbjct: 161 N-LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEA 219
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
G TL GH+D + +++S DGS + + D + W++ + C+ H H
Sbjct: 220 ATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI----VKGECLATYREHSH 275
Query: 274 NFE 276
E
Sbjct: 276 VVE 278
Score = 206 (77.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 64/223 (28%), Positives = 102/223 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTD 111
L GH +AV + F+ G ++AS S D I LW DC L GH + + + +T
Sbjct: 144 LKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVK--TLHGHDHNVSCVRFTPS 201
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
G Q+IS+S DKT++ W+ TG IK + H +V S G + S S+D T K W+
Sbjct: 202 GDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGS-CIASCSNDQTIKTWN 260
Query: 172 MRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+ + + T+ + + + ++FS A+ ID + +G+ S QG +
Sbjct: 261 IVKGECLATYREHSHVVECLAFSTANI------IDIPGSLLSTPEGK-SKVKQGPGGNLV 313
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
G YL T D + IW++ RC+ GH +
Sbjct: 314 GQC-----GYLATGSRDKTIKIWELAT----GRCLATYIGHDN 347
Score = 198 (74.8 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 44/157 (28%), Positives = 73/157 (46%)
Query: 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM 246
I +V F + + + D +KVWD GE TL+GH + + + G+ L +
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSA 168
Query: 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDT 305
D + +WD + Y CVK L GH HN + C ++P G ++ + S D+ + +W+
Sbjct: 169 DLTIKLWDFQTYD----CVKTLHGHDHN-----VSCVRFTPSGDQLISSSRDKTIKVWEA 219
Query: 306 TSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ + L GH V + I SCS+D+ I
Sbjct: 220 ATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTI 256
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 44/178 (24%), Positives = 80/178 (44%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+VS S+D T K+WD +T + + F + + + D +K+WD +
Sbjct: 120 LMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQT 179
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ TL GH ++ + +P G L+++ D + +W+ A C+K L GH+
Sbjct: 180 YDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE----AATGYCIKTLVGHEDWV 235
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
K + S DGS + + S+D+ + W+ L H+ V E + +T +I
Sbjct: 236 RKITV----SEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVV-ECLAFSTANII 288
Score = 159 (61.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 53/211 (25%), Positives = 94/211 (44%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWH-VHGDCKNFMVLKGHKNAILDLHW 108
I L GH+ V + + G+ IAS S+D+ I W+ V G+C + H + + L +
Sbjct: 225 IKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGEC--LATYREHSHVVECLAF 282
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+T + II P L GK K + V C G + +GS D T K
Sbjct: 283 ST--ANIIDI-PGSLL---STPEGKSKVKQGPGGNLVGQC-----G--YLATGSRDKTIK 329
Query: 169 LWDMRQRGAIQTF--PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGH 225
+W++ + T+ D + + AV F + + G D ++VWD+ +G T+ + H
Sbjct: 330 IWELATGRCLATYIGHDNW-VRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAH 388
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
I+ + ++ T G+D + +W ++
Sbjct: 389 THFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 69 (29.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 278 NLL-KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
NL+ +CG+ + GS D+ + IW+ + R L GH V FH + S
Sbjct: 311 NLVGQCGY------LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSV 364
Query: 337 SSDKQIYLGEI 347
DK I + +I
Sbjct: 365 GDDKTIRVWDI 375
Score = 63 (27.2 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 26/113 (23%), Positives = 45/113 (39%)
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290
G +L YL T D + IW++ RC+ GH N+ + + + P G
Sbjct: 309 GGNLVGQCGYLATGSRDKTIKIWELAT----GRCLATYIGHD-NWVRAVR---FHPCGKF 360
Query: 291 VTAGSSDRMVYIWDTTSRRILYKL-PGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ + D+ + +WD R + + HT ++ F P I + D I
Sbjct: 361 LLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVI 413
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 78/253 (30%), Positives = 116/253 (45%)
Query: 62 TMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQIISA 118
T + P+G +A G D ++++ G+ + L GH + + D +QI+++
Sbjct: 2 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTS 60
Query: 119 SPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDMRQRG 176
S D T WD+ETG+Q H V S P R L VSG+ D +AKLWD+R+
Sbjct: 61 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR---LFVSGACDASAKLWDVREGM 117
Query: 177 AIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGM--- 232
QTF + I A+ F + TG D +++DLR + MT H ++I G+
Sbjct: 118 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSV 176
Query: 233 SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKV 291
S S G LL D +WD +R +L GH N + C G + DG V
Sbjct: 177 SFSKSGRLLLAGYDDFNCNVWDA---LKADRA-GVLAGHD-----NRVSCLGVTDDGMAV 227
Query: 292 TAGSSDRMVYIWD 304
GS D + IW+
Sbjct: 228 ATGSWDSFLKIWN 240
Score = 212 (79.7 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F ++ S S D LW + + GH ++ L D
Sbjct: 39 LAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDT 96
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WDV G + H S +N+ C G +GSDD T +L+D+
Sbjct: 97 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDL 155
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + T+ D IT+VSFS + + G D + VWD K + + L GH + +
Sbjct: 156 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 215
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 216 SCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 158 (60.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/189 (25%), Positives = 78/189 (41%)
Query: 136 KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSD 194
+++A H ++ SCC +V S S D T LWD+ TF + ++S +
Sbjct: 37 RELAGHTGYL-SCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 94
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+ +G D K+WD+R+G T GH+ I + P+G+ T D ++D
Sbjct: 95 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 154
Query: 255 MRPYAPQNRCVKILEGHQH-NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313
+R A Q L + H N + +S G + AG D +WD
Sbjct: 155 LR--ADQE-----LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV 207
Query: 314 LPGHTGSVN 322
L GH V+
Sbjct: 208 LAGHDNRVS 216
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 254 (94.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 87/323 (26%), Positives = 143/323 (44%)
Query: 12 NALSTVSARPMEWSTVPYSAPQA-----PGPNGKQRTSSLESPIMLLTGHQSAVYTMKFN 66
++++ + R +S+VP APQ PG + + R + + + H V ++F+
Sbjct: 277 DSITNIFGR-RSFSSVP--APQDNVDTHPGSSKEVRVPV--TAVCVFDAHDGEVNAVQFS 331
Query: 67 PAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125
P ++A+G DR + LW V GD C+ L G I + + + GS +++AS D R
Sbjct: 332 PGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASR 391
Query: 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY 185
W V+ + + H+ V S +VSGS D T KLWD+R + I+T
Sbjct: 392 IWTVDDYRLRHTLTGHSGKVLSA-KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGS 450
Query: 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-DMITGMSLSPDGSYLLTN 244
+ ++ + +G D ++ WD+R S+ G T +P+ + LL+
Sbjct: 451 SCNDIVCTEQC--VMSGHFDKKIRFWDIRYNTRSLVSLGQLLGKQTASRFNPERTELLSC 508
Query: 245 GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG--W-----SPDGSKVTAGSSD 297
D L I D+R + + F KCG W SPDGS V AGS++
Sbjct: 509 SRDDLLKIIDLR-----------INAVRQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAE 557
Query: 298 RMVYIWDTTSRRILYKLPGHTGS 320
+Y+W S ++ L H S
Sbjct: 558 GSLYVWSVLSGKVEKVLSKHHSS 580
Score = 205 (77.2 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 66/248 (26%), Positives = 116/248 (46%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L+G + + +++F+ AG+ + + S+D +W V D + L GH +L + D
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD-DYRLRHTLTGHSGKVLSAKFLLDN 420
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++I+S S D+TL+ WD+ + IK + +S + C + V+SG D + WD+
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQ----CVMSGHFDKKIRFWDI 476
Query: 173 RQ--RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ--GHQ-- 226
R R + + TA F+ ++ + D+ +K+ DLR V T G +
Sbjct: 477 RYNTRSLVSLGQLLGKQTASRFNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCG 536
Query: 227 -DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
D T + SPDGSY+ + L +W + + K+L H H+ N + WS
Sbjct: 537 SDW-TRVVFSPDGSYVAAGSAEGSLYVWSVL----SGKVEKVLSKH-HSSPINAV--AWS 588
Query: 286 PDGSKVTA 293
P G+ V +
Sbjct: 589 PSGAHVAS 596
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 80/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + IQ ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGD---TINAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 208 (78.3 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 69/265 (26%), Positives = 110/265 (41%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
++ D QI+S S DKT++ W+ + K + H +V SC P+ P ++VS
Sbjct: 113 FSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK-ILEGHQHNFEKNLLK 281
G D I + SP+ Y L + IWD+ + + I+ +
Sbjct: 231 DGG-DTINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D ++ +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLIRVWQVT 313
Score = 206 (77.6 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 132 (51.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 41/215 (19%), Positives = 88/215 (40%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
H+ +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H + ++ +SP+ S + + D+MV +W+ + ++
Sbjct: 134 TLGV-----CKYTIQDDSHTEWVSCVR--FSPNSSNPIIVSCGWDKMVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 37/126 (29%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F A I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 72/279 (25%), Positives = 126/279 (45%)
Query: 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII 116
Q AV +++N GT S D+ I LW+ GH + + D + D S I+
Sbjct: 17 QGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLL-LKTYGGHADEVTDAAGSCDSSYIV 75
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR- 175
SAS DK++ WDV TG ++++ H V C + +SG D WD+R R
Sbjct: 76 SASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVC-FNEDSSIAISGGRDNAVMCWDIRTRR 134
Query: 176 -GAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
+Q + IT V+ ++ ++IY +D V+ +D+R GE++ G + IT ++
Sbjct: 135 LDPVQVMKEARDCITTVATNE--NRIYAASLDGCVRTYDIRVGELTCDKIG--EPITYLA 190
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293
+ D L+ D + + D + E H + ++CG + +++
Sbjct: 191 QTRDEQCLVAGCQDSVVRLLDCETGG------LLSEYRGHRGDDYHIECGILSNDAQIVT 244
Query: 294 GSSDRMVYIWDTTSRRILYKLP-GHTGSVNESVFHATEP 331
GSSD +++D ++L ++ G V S+ AT P
Sbjct: 245 GSSDGDAFVYDLLDGKVLQRIRISDNGGVVHSL--ATHP 281
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-FMVLKGHKNAI 103
S +P+ L H V + FN ++ SG D + W + + V+K ++ I
Sbjct: 89 STGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPVQVMKEARDCI 148
Query: 104 LDLHWTTDGSQIISASPDKTLRAWDVETGK-QIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162
+ T+ ++I +AS D +R +D+ G+ K+ E +++ R +V+G
Sbjct: 149 TTV--ATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYL----AQTRDEQCLVAGC 202
Query: 163 DDGTAKLWDMRQRGAIQTFP----DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV 218
D +L D G + + D Y I S+ + +I TG D D V+DL G+V
Sbjct: 203 QDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDA-QIVTGSSDGDAFVYDLLDGKV 261
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 254 (94.5 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 64/261 (24%), Positives = 129/261 (49%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDR-DIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I L+ Q+ + + N +G +A G+ + +W + + +GH +++ L +
Sbjct: 293 IHTLSISQNGIDFVSINKSGEWLAFGASKLGQLLVWEWQSE-SYILKQQGHFDSMNALAY 351
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ DG +I++A+ D L+ WD+E+G I EH S V +C +++G L + S DG+ +
Sbjct: 352 SPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTA-SLDGSIR 410
Query: 169 LWDMRQRGAIQTF--PDKYQITAVSFSDASDKIYTGGIDN-DVKVWDLRKGEVSMTLQGH 225
WD+ + +TF P + + ++ + + + G +D+ DV +W ++ G++ L GH
Sbjct: 411 AWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGH 470
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285
+ ++ ++ +PDG L++ D IW + NR + E Q + ++L
Sbjct: 471 EGPVSAVAFAPDGGLLVSGSWDKTARIWSVF-----NR-TQTSEPLQ--LQADVLSVAVR 522
Query: 286 PDGSKVTAGSSDRMVYIWDTT 306
PD S++ + D + W T
Sbjct: 523 PDSSQLAVSTLDGQISFWSVT 543
Score = 184 (69.8 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 69/307 (22%), Positives = 135/307 (43%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
ES I+ GH ++ + ++P G I + + D + +W + G C + H + +
Sbjct: 333 ESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFC--IVTFTEHTSGVTA 390
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS-DD 164
+ G+ + +AS D ++RAWD+ + + SC +V +GS D
Sbjct: 391 CQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDS 450
Query: 165 GTAKLWDMRQRGAI--QTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL-RKGEVSMT 221
+W + Q G + Q + ++AV+F+ + +G D ++W + + + S
Sbjct: 451 FDVHIWSV-QTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWSVFNRTQTSEP 509
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK----ILEGHQHNFEK 277
LQ D+++ +++ PD S L + +D ++ W + A Q V + G + +
Sbjct: 510 LQLQADVLS-VAVRPDSSQLAVSTLDGQISFWSVTE-AQQVSGVDGRRDVSGGRKITDRR 567
Query: 278 NLLKCG---------WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA 328
G +S DGS + AG + + + ++ TT+ +L K T SVN S+
Sbjct: 568 TAANAGGTKAFHTIQYSMDGSCLIAGGNSKYMCLYSTTTMVLLKKF---TVSVNLSL-SG 623
Query: 329 TEPVIGS 335
T+ + S
Sbjct: 624 TQEFLNS 630
Score = 167 (63.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 46/188 (24%), Positives = 84/188 (44%)
Query: 124 LRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD 183
L W+ ++ I K H +N+ S G +V+ +DDG K+WD+ I TF +
Sbjct: 325 LLVWEWQSESYILKQQGHFDSMNALAYSPDGKR-IVTAADDGKLKVWDIESGFCIVTFTE 383
Query: 184 KYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM-ITGMSLSPDGSYL 241
+TA F+ + ++T +D ++ WDL + T + + M++ P G +
Sbjct: 384 HTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVV 443
Query: 242 LTNGMDC-KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMV 300
+D + IW ++ + + L GH E + ++PDG + +GS D+
Sbjct: 444 AAGSLDSFDVHIWSVQT----GQLLDQLSGH----EGPVSAVAFAPDGGLLVSGSWDKTA 495
Query: 301 YIWDTTSR 308
IW +R
Sbjct: 496 RIWSVFNR 503
Score = 152 (58.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 49/193 (25%), Positives = 79/193 (40%)
Query: 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVK 209
++ G L S G +W+ + I + + A+++S +I T D +K
Sbjct: 309 NKSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKLK 368
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
VWD+ G +T H +T + G+ L T +D + WD+ Y R +
Sbjct: 369 VWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRY----RNFRTFT 424
Query: 270 GHQHNFEKNLLKC-GWSPDGSKVTAGSSDRM-VYIWDTTSRRILYKLPGHTGSVNESVFH 327
+ C P G V AGS D V+IW + ++L +L GH G V+ F
Sbjct: 425 APT----RLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFA 480
Query: 328 ATEPVIGSCSSDK 340
++ S S DK
Sbjct: 481 PDGGLLVSGSWDK 493
Score = 62 (26.9 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 24/87 (27%), Positives = 38/87 (43%)
Query: 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVH--------GDCKNFM-VLKGHKNA----- 102
++AV + F+P+G A G R I +W V D F ++ H +A
Sbjct: 96 RTAVTALSFSPSGRHFAVGI-GRRIEVWQVPQTPDSATGDDGLEFAPFVRHHSHAAHFDE 154
Query: 103 ILDLHWTTDGSQIISASPDKTLRAWDV 129
+ + W+ D +SAS D T R W +
Sbjct: 155 VRHIEWSRDSRFFLSASKDLTARIWSL 181
Score = 59 (25.8 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 25/116 (21%), Positives = 46/116 (39%)
Query: 24 WSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFL 83
W VP + A G +G + + H V ++++ S S D +
Sbjct: 122 WQ-VPQTPDSATGDDGLEFAPFVRHHSH--AAHFDEVRHIEWSRDSRFFLSASKDLTARI 178
Query: 84 WHVHGDCKNFM--VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137
W ++ + + F VL GH+ ++ ++ D I + S D + W G Q K+
Sbjct: 179 WSLNQE-EGFTPTVLSGHRQGVVGAWFSMDQETIYTVSKDGAVFDWQY-VGPQDKE 232
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 252 (93.8 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 86/309 (27%), Positives = 133/309 (43%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCK-NFMVLKGHKNAILDL 106
S I L H+ V + F+ G ++A+ S D+ I ++ + F L GH +
Sbjct: 3 SLICTLQSHRDDVNCVAFS--GDLLATCSADKSICVYSSRDFSELPFSPLSGHGYGVHCC 60
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEH--NSFVNSCCPSRRGPPLVVSGSDD 164
++ G + S S D T W ++TG +I+ + EH S V C S LV SG D
Sbjct: 61 CFSACGQYLASCSTDATTMVWSMDTG-EIEAVLEHPGRSPVRVCAFSPDSSHLV-SGGSD 118
Query: 165 GTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
G+ LWD R +T + I A SF+ TG D+++WDL +
Sbjct: 119 GSIALWDFTSRTLRRTGVVNDTSIVACSFTPCGQMFITGSTYGDLRLWDLNMNHLHAEKN 178
Query: 224 GHQDMITGMSLSP------DGSY---LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274
H ++ +P DG L + G D L IW + P + +K+ H
Sbjct: 179 AHDLGVSCAQFAPKMMKGTDGCVQFRLASCGQDSLLKIWIVS-LLP-SAGIKMQLAHTLT 236
Query: 275 FEKN-LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333
+ +L C +SPDG + +GS D+ V ++ +LY L H V F T P+I
Sbjct: 237 GQSAPVLSCAYSPDGQMLVSGSVDKTVTVYQADEGVLLYTLHQHDRYVTACAFSPTAPLI 296
Query: 334 GSCSSDKQI 342
+ S DK +
Sbjct: 297 ATGSMDKSV 305
Score = 172 (65.6 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 62/277 (22%), Positives = 119/277 (42%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILD 105
E P L+GH V+ F+ G +AS S D +W + G+ + + G ++ +
Sbjct: 44 ELPFSPLSGHGYGVHCCCFSACGQYLASCSTDATTMVWSMDTGEIEAVLEHPG-RSPVRV 102
Query: 106 LHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165
++ D S ++S D ++ WD T + +++ N C + ++GS G
Sbjct: 103 CAFSPDSSHLVSGGSDGSIALWDF-TSRTLRRTGVVNDTSIVACSFTPCGQMFITGSTYG 161
Query: 166 TAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG------------GIDNDVKVWDL 213
+LWD+ + + + + VS + + K+ G G D+ +K+W +
Sbjct: 162 DLRLWDLNMNH-LHAEKNAHDL-GVSCAQFAPKMMKGTDGCVQFRLASCGQDSLLKIWIV 219
Query: 214 R-------KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 266
K +++ TL G + + SPDG L++ +D + ++ A + +
Sbjct: 220 SLLPSAGIKMQLAHTLTGQSAPVLSCAYSPDGQMLVSGSVDKTVTVYQ----ADEGVLLY 275
Query: 267 ILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW 303
L HQH ++ + C +SP + GS D+ V IW
Sbjct: 276 TL--HQH--DRYVTACAFSPTAPLIATGSMDKSVNIW 308
Score = 124 (48.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 51/180 (28%), Positives = 80/180 (44%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLW-----HVHGDCKNFMVLKGHKNAIL--DLHW 108
+ +++ F P G + +GS D+ LW H+H + KN L G A +
Sbjct: 138 NDTSIVACSFTPCGQMFITGSTYGDLRLWDLNMNHLHAE-KNAHDL-GVSCAQFAPKMMK 195
Query: 109 TTDGS---QIISASPDKTLRAWDVET--GKQIKKMAEH-----NSFVNSCCPSRRGPPLV 158
TDG ++ S D L+ W V IK H ++ V SC S G ++
Sbjct: 196 GTDGCVQFRLASCGQDSLLKIWIVSLLPSAGIKMQLAHTLTGQSAPVLSCAYSPDGQ-ML 254
Query: 159 VSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
VSGS D T ++ + + T D+Y +TA +FS + I TG +D V +W + +G
Sbjct: 255 VSGSVDKTVTVYQADEGVLLYTLHQHDRY-VTACAFSPTAPLIATGSMDKSVNIWRMEEG 313
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L G +L ++ DG ++S S DKT+ + + G + + +H+ +V +C S P
Sbjct: 235 LTGQSAPVLSCAYSPDGQMLVSGSVDKTVTVYQADEGVLLYTLHQHDRYVTACAFSPTAP 294
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQ 179
L+ +GS D + +W M + + Q
Sbjct: 295 -LIATGSMDKSVNIWRMEEGSSAQ 317
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 14 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 73
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 74 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 132
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 133 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 192
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 193 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 243
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 244 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 273
Score = 214 (80.4 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 58 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 115
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 116 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 173
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 174 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 233
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 234 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 291
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 292 LAWSADGQTLFAGYTDNLVRVWQVT 316
Score = 207 (77.9 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 14 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 73
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 74 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 132
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 133 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 185
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 186 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 235
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 17 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 76
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 77 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 136
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 137 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 189
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 190 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 224
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 71
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 72 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 128
Query: 339 DKQIYL 344
DK I L
Sbjct: 129 DKTIKL 134
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 150 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 208
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 209 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 266
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 267 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 318
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 79/271 (29%), Positives = 126/271 (46%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + L+GH + + D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S S D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + +Q ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
GH + +++SPDGS + G D + +WD+ + + + L+G N L C
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGGDII---NAL-C- 240
Query: 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
+SP+ + A + + IWD + I+ +L
Sbjct: 241 FSPNRYWLCAATGPS-IKIWDLEGKIIVDEL 270
Score = 214 (80.4 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 70/265 (26%), Positives = 112/265 (42%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLH 107
P L GH V + + G SGS D + LW + G V GH +L +
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVA 112
Query: 108 WTTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSD 163
+++D QI+S S DKT++ W+ + K + H+ +V SC P+ P ++VS
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV-SCVRFSPNSSNP-IIVSCGW 170
Query: 164 DGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
D K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK-NLLK 281
G D+I + SP+ Y L + IWD+ + + + E
Sbjct: 231 DGG-DIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 288
Query: 282 CGWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D +V +W T
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVT 313
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/233 (29%), Positives = 108/233 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQIKKMA--EHNSFVNSCC 149
LKGH + + T I+SAS DKT+ W + ET I + A H+ FV+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SGS DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q H + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
K+ H H N + SPDGS +G D +WD + LY L G
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/215 (19%), Positives = 89/215 (41%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
HN +V + + P +++S S D T +W + + P + + ++ V S
Sbjct: 14 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H+ + ++ +SP+ S + + D++V +W+ + ++
Sbjct: 134 TLGV-----CKYTVQDESHSEWVSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 221 TLQGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDM-RPYAPQNRCVKILEGHQHNFEKN 278
TL+GH +T ++ +P +L+ D + +W + R + L GH H F +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH-FVSD 68
Query: 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338
++ S DG +GS D + +WD T+ + GHT V F + I S S
Sbjct: 69 VVI---SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 339 DKQIYL 344
DK I L
Sbjct: 126 DKTIKL 131
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 56 HQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS 113
H V ++F+P + +I S D+ + +W++ +CK GH + + + DGS
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 114 QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDDG 165
S D WD+ GK + + + +N+ C P+R GP + + + G
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLE-G 263
Query: 166 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
+ +++Q I T + Q T++++S ++ G DN V+VW + G
Sbjct: 264 KIIVDELKQE-VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 252 (93.8 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 74/261 (28%), Positives = 117/261 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
L GH + V + F+P TV +AS + D + LW + D + ++GH +
Sbjct: 268 LRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSD-EPVADIEGHTVRVA 326
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
+ W G + + D++ R WD+E ++I H+ V + G L +G D
Sbjct: 327 RVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLD 385
Query: 165 GTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
++WD+R I +I ++FS I TG DN KVWDLR+ T+
Sbjct: 386 AFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIP 445
Query: 224 GHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
HQ+++TG+ P G++LLT D IW ++P +K L GH E ++
Sbjct: 446 AHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSP----LKTLAGH----EGKVMGL 497
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
S DG + S DR +W
Sbjct: 498 DISSDGQLIATCSYDRTFKLW 518
Score = 250 (93.1 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 38 NGKQRTSSLES--PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G + SL+S P+ + GH V + ++P+G + + +DR LW + + +
Sbjct: 301 DGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQ-EEILH 359
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
+GH + D+ + DGS + D R WD+ TG+ I + H + S G
Sbjct: 360 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 419
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDK-IYTGGIDNDVKVWDL 213
+ +GS D T K+WD+RQR + T P +T V F + TG DN K+W
Sbjct: 420 H-IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH 478
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
TL GH+ + G+ +S DG + T D +W
Sbjct: 479 PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 218 (81.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 76/293 (25%), Positives = 124/293 (42%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDGS------QII 116
F+P ++A+ LW V DC L+GH + + H + S +
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVP-DCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 296
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMR- 173
S + D +++ W +++ + + + H V PS R + + D + +LWD+
Sbjct: 297 SCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGR---FLGTTCYDRSWRLWDLEA 353
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q + + ++F TGG+D +VWDLR G M L+GH I G++
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 413
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSP-DGSKV 291
SP+G ++ T D +WD+R Q RCV + HQ NL+ + P G+ +
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLR----QRRCVYTIPAHQ-----NLVTGVKFEPIHGNFL 464
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G+ D IW L L GH G V + +I +CS D+ L
Sbjct: 465 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Score = 201 (75.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 61/252 (24%), Positives = 103/252 (40%)
Query: 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC-- 149
NF G I H++ + + +A + W V + + HN+ V +
Sbjct: 222 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 281
Query: 150 PSR-----RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGG 203
P + + S + DG+ KLW + + ++ V++ + + T
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTC 341
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D ++WDL E + +GH + ++ DGS T G+D +WD+R R
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT----GR 397
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
C+ LEGH K + +SP+G + GS D +WD RR +Y +P H V
Sbjct: 398 CIMFLEGHL----KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTG 453
Query: 324 SVFHATEPVIGS 335
F EP+ G+
Sbjct: 454 VKF---EPIHGN 462
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 252 (93.8 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 68/243 (27%), Positives = 109/243 (44%)
Query: 15 STVSARPMEWSTVPYSAPQAPGPNGKQRTSSLES--PIMLLTGHQSAVYTMKFNPAGTVI 72
STVS P + + +A +G + SL+S P+ + GH V + ++P+G +
Sbjct: 285 STVSLDPKDVNLASCAA------DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFL 338
Query: 73 ASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG 132
+ +DR LW + + + +GH + D+ + DGS + D R WD+ TG
Sbjct: 339 GTTCYDRSWRLWDLEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG 397
Query: 133 KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVS 191
+ I + H + S G + +GS D T K+WD+RQR + T P +T V
Sbjct: 398 RCIMFLEGHLKEIYGINFSPNGYH-IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVK 456
Query: 192 FSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKL 250
F + TG DN K+W TL GH+ + G+ +S DG + T D
Sbjct: 457 FEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTF 516
Query: 251 CIW 253
+W
Sbjct: 517 KLW 519
Score = 252 (93.8 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 74/261 (28%), Positives = 117/261 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
L GH + V + F+P TV +AS + D + LW + D + ++GH +
Sbjct: 269 LRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSD-EPVADIEGHTVRVA 327
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
+ W G + + D++ R WD+E ++I H+ V + G L +G D
Sbjct: 328 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLD 386
Query: 165 GTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
++WD+R I +I ++FS I TG DN KVWDLR+ T+
Sbjct: 387 AFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIP 446
Query: 224 GHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
HQ+++TG+ P G++LLT D IW ++P +K L GH E ++
Sbjct: 447 AHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSP----LKTLAGH----EGKVMGL 498
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
S DG + S DR +W
Sbjct: 499 DISSDGQLIATCSYDRTFKLW 519
Score = 218 (81.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 76/293 (25%), Positives = 124/293 (42%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDGS------QII 116
F+P ++A+ LW V DC L+GH + + H + S +
Sbjct: 239 FSPNSKMLATACWSGLCKLWSVP-DCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLA 297
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMR- 173
S + D +++ W +++ + + + H V PS R + + D + +LWD+
Sbjct: 298 SCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR---FLGTTCYDRSWRLWDLEA 354
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q + + ++F TGG+D +VWDLR G M L+GH I G++
Sbjct: 355 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 414
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSP-DGSKV 291
SP+G ++ T D +WD+R Q RCV + HQ NL+ + P G+ +
Sbjct: 415 FSPNGYHIATGSGDNTCKVWDLR----QRRCVYTIPAHQ-----NLVTGVKFEPIHGNFL 465
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G+ D IW L L GH G V + +I +CS D+ L
Sbjct: 466 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 518
Score = 202 (76.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 63/252 (25%), Positives = 102/252 (40%)
Query: 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC-- 149
NF G I H++ + + +A + W V + + HN+ V +
Sbjct: 223 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 282
Query: 150 PSRR---GPPLV--VSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGG 203
P P V S + DG+ KLW + + ++ V + + + T
Sbjct: 283 PKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 342
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D ++WDL E + +GH + ++ DGS T G+D +WD+R R
Sbjct: 343 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT----GR 398
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
C+ LEGH K + +SP+G + GS D +WD RR +Y +P H V
Sbjct: 399 CIMFLEGHL----KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTG 454
Query: 324 SVFHATEPVIGS 335
F EP+ G+
Sbjct: 455 VKF---EPIHGN 463
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 252 (93.8 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 76/303 (25%), Positives = 150/303 (49%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFM--VLKGHKNAILDLH 107
+ +L H++ V+ ++F+ +G +A+ S D +W V D K + L+ H+N + +
Sbjct: 217 VQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVS 276
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS-F-VNSCCPSRRGPPLVVSGSD-D 164
W+ D +++++ + L+ WDV+TG +N+ F V+SC LV SD +
Sbjct: 277 WSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPE 336
Query: 165 GTAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222
+WD I+ + ++ ++ + + + T D ++++ +L +V +
Sbjct: 337 RGIVMWDT-DGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLET-KVERVI 394
Query: 223 QGHQDMITGMSLSPDGSYLLTNGMDCK-LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281
Q IT +S+S DG + + N + C+ + +WD+ Q +K GH+ + K +++
Sbjct: 395 SEEQP-ITSLSISGDGKFFIVN-LSCQEIHLWDLAGEWKQP--LKF-SGHRQS--KYVIR 447
Query: 282 -CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP-VIGSCSSD 339
C D S + +GS D VYIW+ + + L L GH+ +VN ++ P ++ S S D
Sbjct: 448 SCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDD 507
Query: 340 KQI 342
+ I
Sbjct: 508 QTI 510
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 30/132 (22%), Positives = 61/132 (46%)
Query: 42 RTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN 101
R +LE+ + + + + ++ + G ++I LW + G+ K + GH+
Sbjct: 382 RILNLETKVERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQ 441
Query: 102 A---ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLV 158
+ I D S I S S D + W+++ K ++ ++ H+ VN + + P ++
Sbjct: 442 SKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRML 501
Query: 159 VSGSDDGTAKLW 170
S SDD T ++W
Sbjct: 502 ASASDDQTIRIW 513
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 252 (93.8 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 74/261 (28%), Positives = 117/261 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
L GH + V + F+P TV +AS + D + LW + D + ++GH +
Sbjct: 284 LRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSD-EPVADIEGHTVRVA 342
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
+ W G + + D++ R WD+E ++I H+ V + G L +G D
Sbjct: 343 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLD 401
Query: 165 GTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
++WD+R I +I ++FS I TG DN KVWDLR+ T+
Sbjct: 402 AFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIP 461
Query: 224 GHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
HQ+++TG+ P G++LLT D IW ++P +K L GH E ++
Sbjct: 462 AHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSP----LKTLAGH----EGKVMGL 513
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
S DG + S DR +W
Sbjct: 514 DISSDGQLIATCSYDRTFKLW 534
Score = 250 (93.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 38 NGKQRTSSLES--PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G + SL+S P+ + GH V + ++P+G + + +DR LW + + +
Sbjct: 317 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ-EEILH 375
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
+GH + D+ + DGS + D R WD+ TG+ I + H + S G
Sbjct: 376 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 435
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDK-IYTGGIDNDVKVWDL 213
+ +GS D T K+WD+RQR + T P +T V F + TG DN K+W
Sbjct: 436 H-IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH 494
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
TL GH+ + G+ +S DG + T D +W
Sbjct: 495 PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 218 (81.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 76/293 (25%), Positives = 124/293 (42%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDGS------QII 116
F+P ++A+ LW V DC L+GH + + H + S +
Sbjct: 254 FSPNSKMLATACWSGLCKLWSVP-DCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 312
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMR- 173
S + D +++ W +++ + + + H V PS R + + D + +LWD+
Sbjct: 313 SCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR---FLGTTCYDRSWRLWDLEA 369
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q + + ++F TGG+D +VWDLR G M L+GH I G++
Sbjct: 370 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 429
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSP-DGSKV 291
SP+G ++ T D +WD+R Q RCV + HQ NL+ + P G+ +
Sbjct: 430 FSPNGYHIATGSGDNTCKVWDLR----QRRCVYTIPAHQ-----NLVTGVKFEPIHGNFL 480
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G+ D IW L L GH G V + +I +CS D+ L
Sbjct: 481 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 533
Score = 199 (75.1 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 61/252 (24%), Positives = 102/252 (40%)
Query: 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC-- 149
NF G I H++ + + +A + W V + + HN+ V +
Sbjct: 238 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 297
Query: 150 PSR-----RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGG 203
P + + S + DG+ KLW + + ++ V + + + T
Sbjct: 298 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 357
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D ++WDL E + +GH + ++ DGS T G+D +WD+R R
Sbjct: 358 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT----GR 413
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
C+ LEGH K + +SP+G + GS D +WD RR +Y +P H V
Sbjct: 414 CIMFLEGHL----KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTG 469
Query: 324 SVFHATEPVIGS 335
F EP+ G+
Sbjct: 470 VKF---EPIHGN 478
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 252 (93.8 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 74/261 (28%), Positives = 117/261 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAIL 104
L GH + V + F+P TV +AS + D + LW + D + ++GH +
Sbjct: 286 LRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSD-EPVADIEGHTVRVA 344
Query: 105 DLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD 164
+ W G + + D++ R WD+E ++I H+ V + G L +G D
Sbjct: 345 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLD 403
Query: 165 GTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
++WD+R I +I ++FS I TG DN KVWDLR+ T+
Sbjct: 404 AFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIP 463
Query: 224 GHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
HQ+++TG+ P G++LLT D IW ++P +K L GH E ++
Sbjct: 464 AHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSP----LKTLAGH----EGKVMGL 515
Query: 283 GWSPDGSKVTAGSSDRMVYIW 303
S DG + S DR +W
Sbjct: 516 DISSDGQLIATCSYDRTFKLW 536
Score = 250 (93.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 38 NGKQRTSSLES--PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G + SL+S P+ + GH V + ++P+G + + +DR LW + + +
Sbjct: 319 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ-EEILH 377
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
+GH + D+ + DGS + D R WD+ TG+ I + H + S G
Sbjct: 378 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 437
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDK-IYTGGIDNDVKVWDL 213
+ +GS D T K+WD+RQR + T P +T V F + TG DN K+W
Sbjct: 438 H-IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH 496
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253
TL GH+ + G+ +S DG + T D +W
Sbjct: 497 PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 218 (81.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 76/293 (25%), Positives = 124/293 (42%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDGS------QII 116
F+P ++A+ LW V DC L+GH + + H + S +
Sbjct: 256 FSPNSKMLATACWSGLCKLWSVP-DCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 314
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMR- 173
S + D +++ W +++ + + + H V PS R + + D + +LWD+
Sbjct: 315 SCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR---FLGTTCYDRSWRLWDLEA 371
Query: 174 QRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
Q + + ++F TGG+D +VWDLR G M L+GH I G++
Sbjct: 372 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 431
Query: 234 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSP-DGSKV 291
SP+G ++ T D +WD+R Q RCV + HQ NL+ + P G+ +
Sbjct: 432 FSPNGYHIATGSGDNTCKVWDLR----QRRCVYTIPAHQ-----NLVTGVKFEPIHGNFL 482
Query: 292 TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G+ D IW L L GH G V + +I +CS D+ L
Sbjct: 483 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 535
Score = 199 (75.1 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 61/252 (24%), Positives = 102/252 (40%)
Query: 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC-- 149
NF G I H++ + + +A + W V + + HN+ V +
Sbjct: 240 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 299
Query: 150 PSR-----RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGG 203
P + + S + DG+ KLW + + ++ V + + + T
Sbjct: 300 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 359
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D ++WDL E + +GH + ++ DGS T G+D +WD+R R
Sbjct: 360 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT----GR 415
Query: 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
C+ LEGH K + +SP+G + GS D +WD RR +Y +P H V
Sbjct: 416 CIMFLEGHL----KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTG 471
Query: 324 SVFHATEPVIGS 335
F EP+ G+
Sbjct: 472 VKF---EPIHGN 480
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 244 (91.0 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 79/257 (30%), Positives = 119/257 (46%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ + L GH + + D +Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQ 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q A H V S P R L VSG+ D +AKLWD+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTR---LFVSGACDASAKLWDV 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R+ QTF + I A+ F + TG D +++DLR + M + H ++I G
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM-VYSHDNIICG 272
Query: 232 MS---LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
++ S G LL D +WD +R +L GH N + C G + D
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCNVWDA---LKADRA-GVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 209 (78.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 55/214 (25%), Positives = 99/214 (46%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPDKY----QITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ + ++ F D ++I T D +
Sbjct: 111 -YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SL+PD ++ D +WD+R + C + G
Sbjct: 169 WDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H+ + N + C + P+G+ GS D ++D
Sbjct: 225 HESDI--NAI-C-FFPNGNAFATGSDDATCRLFD 254
Score = 204 (76.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 54/205 (26%), Positives = 90/205 (43%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F ++ S S D LW + + GH ++ L D
Sbjct: 139 LAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETG-QQTTTFAGHTGDVMSLSLAPDT 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WDV G + H S +N+ C G +GSDD T +L+D+
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + + D IT+V+FS + + G D + VWD K + + L GH + +
Sbjct: 256 RADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/188 (21%), Positives = 73/188 (38%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ D + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIET----GQQTTTFAGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ +PD +G+ D +WD GH +N F
Sbjct: 184 TGD----VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 244 (91.0 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 78/258 (30%), Positives = 120/258 (46%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G+ +A G D ++ + G+ + L GH + + D +Q
Sbjct: 98 SWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQ 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q H V S P R +SG+ D +AKLWD+
Sbjct: 157 IVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFR---TFISGACDASAKLWDI 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R QTFP + I AV+F + + TG D +++D+R + + + H ++I G
Sbjct: 214 RDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICG 272
Query: 232 MS---LSPDGSYLLTNGMDCKLCIWD-MRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSP 286
++ S G L D +WD MR Q R +L GH N + C G +
Sbjct: 273 ITSVAFSKSGRLLFAGYDDFNCNVWDSMR----QERA-GVLAGHD-----NRVSCLGVTE 322
Query: 287 DGSKVTAGSSDRMVYIWD 304
DG V GS D + IW+
Sbjct: 323 DGMAVCTGSWDSFLKIWN 340
Score = 203 (76.5 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/214 (25%), Positives = 92/214 (42%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW +D ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGS 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQT---FPDKY-QITAVSFSDASDKIYTGGIDNDVKV 210
V G D ++ ++ R G ++ P ++ F D ++I T D +
Sbjct: 111 -FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIVTSSGDMTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ GH + +SLSPD ++ D +WD+R C + G
Sbjct: 169 WDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIR----DGMCKQTFPG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H E ++ + P G+ GS D ++D
Sbjct: 225 H----ESDINAVAFFPSGNAFATGSDDATCRLFD 254
Score = 193 (73.0 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GD-CKNFMVLKGHKNAILDLHWTT 110
L GH + +F ++ S S D LW + G C F GH ++ L +
Sbjct: 139 LPGHTGYLSCCRFLDDNQIVTS-SGDMTCALWDIETGQQCTAFT---GHTGDVMSLSLSP 194
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
D IS + D + + WD+ G + H S +N+ G +GSDD T +L+
Sbjct: 195 DFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFA-TGSDDATCRLF 253
Query: 171 DMRQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
D+R + + D IT+V+FS + ++ G D + VWD + E + L GH +
Sbjct: 254 DIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDN 313
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWD 254
++ + ++ DG + T D L IW+
Sbjct: 314 RVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 140 (54.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 44/195 (22%), Positives = 76/195 (38%)
Query: 158 VVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL--R 214
+VS S DG +WD + P + + +++ + + GG+DN ++ L R
Sbjct: 70 LVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129
Query: 215 KGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
+G V S L GH ++ D + ++G D +WD+ +C GH
Sbjct: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSG-DMTCALWDIET---GQQCTAFT-GHT 184
Query: 273 HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPV 332
+ ++ SPD +G+ D +WD PGH +N F +
Sbjct: 185 GD----VMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNA 240
Query: 333 IGSCSSDKQIYLGEI 347
+ S D L +I
Sbjct: 241 FATGSDDATCRLFDI 255
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 244 (91.0 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 80/257 (31%), Positives = 118/257 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ + L GH + + DG Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDG-Q 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL--VVSGSDDGTAKLWDM 172
II++S D T WD+ETG+Q H+ V S S P L VSG+ D ++KLWD+
Sbjct: 157 IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLS---PDLKTFVSGACDASSKLWDI 213
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R Q+F I AVSF + TG D +++DLR + + L H ++I G
Sbjct: 214 RDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQ-ELLLYSHDNIICG 272
Query: 232 MS---LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
++ S G LL D +WD A + +L GH N + C G + D
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCSVWD----ALKGGRAGVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLRIWN 340
Score = 195 (73.7 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 55/205 (26%), Positives = 91/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F G +I S S D LW + + GH ++ L + D
Sbjct: 139 LPGHTGYLSCCRFLDDGQIITS-SGDTTCALWDIETG-QQTTTFTGHSGDVMSLSLSPDL 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WD+ G + H S +N+ G +GSDD T +L+D+
Sbjct: 197 KTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + + D IT+V+FS + + G D + VWD KG + L GH + +
Sbjct: 256 RADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 186 (70.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 55/214 (25%), Positives = 92/214 (42%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW D ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQT---FPDKY-QITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ P ++ F D I + G D +
Sbjct: 111 -YVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SLSPD ++ D +WD+R C + G
Sbjct: 169 WDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIR----DGMCRQSFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H + N + + P G GS D ++D
Sbjct: 225 HISDI--NAVS--FFPSGYAFATGSDDATCRLFD 254
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/188 (22%), Positives = 75/188 (39%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ DG + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIET----GQQTTTFTGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ SPD +G+ D +WD GH +N F +
Sbjct: 184 SGD----VMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGY 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 67/212 (31%), Positives = 101/212 (47%)
Query: 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMV----LKGHKNAILDLH 107
L GH V + P +I S S D+ I +W + D N+ + LKGH + + D+
Sbjct: 11 LKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVV 70
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++DG +S + D TLR WD+ TG ++ H V S S +VSGS D T
Sbjct: 71 ISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQ-IVSGSRDKTI 129
Query: 168 KLWDMRQ--RGAIQTFPDKYQITAVSFSDASDK--IYTGGIDNDVKVWDLRKGEVSMTLQ 223
KLW+ + IQ ++ V FS S I + G D VKVW+L ++
Sbjct: 130 KLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHI 189
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255
GH + +++SPDGS + G D + +WD+
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 198 (74.8 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 64/264 (24%), Positives = 109/264 (41%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
P L GH V + + G SG+ D + LW + + GH +L + +
Sbjct: 55 PQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFV-GHTKDVLSVAF 113
Query: 109 TTDGSQIISASPDKTLRAWD-VETGKQIKKMAEHNSFVNSCC---PSRRGPPLVVSGSDD 164
+ D QI+S S DKT++ W+ + K + H +V SC P+ P ++VS D
Sbjct: 114 SADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWV-SCVRFSPNSSNP-IIVSCGWD 171
Query: 165 GTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ 223
K+W++ + + V+ S +GG D +WDL +G+ TL
Sbjct: 172 KMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC-VKILEGHQHNFEKNLLKC 282
D+I + SP+ Y L + IWD+ + +++ +
Sbjct: 232 SG-DVINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSL 289
Query: 283 GWSPDGSKVTAGSSDRMVYIWDTT 306
WS DG + AG +D ++ +W T
Sbjct: 290 AWSADGQTLFAGYTDNLIRVWQVT 313
Score = 197 (74.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 65/231 (28%), Positives = 108/231 (46%)
Query: 96 LKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV---ETGKQI--KKMAEHNSFVNSCC 149
LKGH + + T I+SAS DK++ W + ET I + + H+ FV+
Sbjct: 11 LKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVV 70
Query: 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDV 208
S G +SG+ DGT +LWD+ + F + + +V+FS + +I +G D +
Sbjct: 71 ISSDGQ-FALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTI 129
Query: 209 KVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGS--YLLTNGMDCKLCIWDMRPYAPQNRC 264
K+W+ G T+Q GH + ++ + SP+ S +++ G D + +W++ C
Sbjct: 130 KLWNTL-GVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA------NC 182
Query: 265 VKILEGH-QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314
K+ H H N + SPDGS +G D +WD + LY L
Sbjct: 183 -KLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 40/215 (18%), Positives = 88/215 (40%)
Query: 141 HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------YQITAVSFSD 194
H+ +V + + P +++S S D + +W + + P + + ++ V S
Sbjct: 14 HSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISS 73
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
+G D +++WDL G + GH + ++ S D +++ D + +W+
Sbjct: 74 DGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILY 312
C ++ H + ++ +SP+ S + + D+MV +W+ + ++
Sbjct: 134 TLGV-----CKYTIQDEGHTEWVSCVR--FSPNSSNPIIVSCGWDKMVKVWNLANCKLKT 186
Query: 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
GHTG +N + S D Q L ++
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 40/173 (23%), Positives = 79/173 (45%)
Query: 55 GHQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
GH V ++F+P + +I S D+ + +W++ +CK GH + + + DG
Sbjct: 146 GHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDG 204
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCC--PSR------RGPPLVVSGSDD 164
S S D WD+ GK + + + +N+ C P+R GP + + +
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTL-DSGDVINALCFSPNRYWLCAATGPSIKIWDLE- 262
Query: 165 GTAKLWDMRQRG-AIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
G + ++RQ + + + Q T++++S ++ G DN ++VW + G
Sbjct: 263 GKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIG 315
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 251 (93.4 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 71/243 (29%), Positives = 107/243 (44%)
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP-------PL-VV 159
++ D I++A ++ W E Q K H+S C G L VV
Sbjct: 212 FSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAG-CARFHPGAFTQNDYSSLNVV 270
Query: 160 SGSDDGTAKLWDMRQR---GAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
S S DGT LW + Q G ++ P + ++ V+F + T D+ +++DL
Sbjct: 271 SCSYDGTVLLWSLSQESPIGELEQHPQR--VSKVAFHPNGHHLATACFDSTWRMYDLTTK 328
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276
+ + +GH + ++ PDGS LT G DC +WDMR RC+ L+GH
Sbjct: 329 KELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRT----GRCIMFLDGHT---- 380
Query: 277 KNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
K + W P+G ++ GSSD + +WD RR Y +P HT V A + S
Sbjct: 381 KEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSA 440
Query: 337 SSD 339
S D
Sbjct: 441 SFD 443
Score = 228 (85.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/217 (27%), Positives = 97/217 (44%)
Query: 45 SLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG--DCKNFMVLKGHKNA 102
S ESPI L H V + F+P G +A+ D W ++ K + +GH +
Sbjct: 284 SQESPIGELEQHPQRVSKVAFHPNGHHLATACFDST---WRMYDLTTKKELLYQEGHSKS 340
Query: 103 ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162
+ D+ + DGS ++ D R WD+ TG+ I + H ++S G ++ +GS
Sbjct: 341 VADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMI-TGS 399
Query: 163 DDGTAKLWDMRQRGAIQTFPDKYQI-TAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT 221
D + K+WD+R R T P + T V A + + D +K+W +
Sbjct: 400 SDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQ 459
Query: 222 LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258
LQGH I + +SPDG ++ ++ D +W Y
Sbjct: 460 LQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQSDY 496
Score = 226 (84.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 66/259 (25%), Positives = 115/259 (44%)
Query: 55 GHQSAVYTMKFNPAGTV--------IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDL 106
GH S +F+P + S S+D + LW + + L+ H + +
Sbjct: 244 GHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESP-IGELEQHPQRVSKV 302
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
+ +G + +A D T R +D+ T K++ H+ V G + ++G D
Sbjct: 303 AFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGS-VALTGGHDCY 361
Query: 167 AKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG 224
++WDMR I F D + +I +V + ++ TG DN +KVWDLR + T+
Sbjct: 362 GRVWDMRTGRCIM-FLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPA 420
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
H ++T + G YL++ DC L +W + P ++ L+GH + +L
Sbjct: 421 HTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQP----LRQLQGH----DTRILCVDI 472
Query: 285 SPDGSKVTAGSSDRMVYIW 303
SPDG + + + DR +W
Sbjct: 473 SPDGQWMCSSAFDRTFKLW 491
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 50/205 (24%), Positives = 85/205 (41%)
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
++S S D T+ W + I ++ +H V+ G L + D T +++D+
Sbjct: 269 VVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATA-CFDSTWRMYDLTT 327
Query: 175 RGAI--QTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGM 232
+ + Q K + V+F TGG D +VWD+R G M L GH I +
Sbjct: 328 KKELLYQEGHSK-SVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSV 386
Query: 233 SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292
P+G ++T D + +WD+R R + H + + G +
Sbjct: 387 EWMPNGYEMITGSSDNSMKVWDLR----MRRNTYTMPAHT----SVVTRVRADAAGQYLV 438
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGH 317
+ S D + +W TT + L +L GH
Sbjct: 439 SASFDCTLKMWSTTGWQPLRQLQGH 463
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 252 (93.8 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 58/206 (28%), Positives = 100/206 (48%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L GH VY+ +F + + S S D I W + G N ++ +GH + D+ +
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDVDISPF 395
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
S S D+T R W + ++ A H + V+ C + +GS D T +LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVD-CVKFHPNSNYLATGSTDKTVRLWS 454
Query: 172 MRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+Q +++ F + + ++SFS + + G D +K+WDL G + L+GH D IT
Sbjct: 455 AQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSIT 514
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMR 256
++ SPD + + MD + +WD+R
Sbjct: 515 SLAFSPDSGLIASASMDNSVRVWDIR 540
Score = 220 (82.5 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 57/214 (26%), Positives = 93/214 (43%)
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
+L+GH + + D S ++S S D ++R WD+ + H V S
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFS 396
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDL 213
SGS D TA+LW + ++ + + V F S+ + TG D V++W
Sbjct: 397 L-YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
++G GH+ + +S SP+G YL + G D +L +WD+ K L GH
Sbjct: 456 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLA----SGTLFKELRGHTD 511
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307
+ + +SPD + + S D V +WD S
Sbjct: 512 S----ITSLAFSPDSGLIASASMDNSVRVWDIRS 541
Score = 198 (74.8 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 54/203 (26%), Positives = 85/203 (41%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
+L GH V+ + +P ASGSHDR LW + GH + + +
Sbjct: 378 VLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYP-LRIYAGHLADVDCVKFHP 436
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
+ + + + S DKT+R W + G ++ H V S S G L +G D KLW
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQ-RLKLW 495
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+ + IT+++FS S I + +DN V+VWD+R + G +
Sbjct: 496 DLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGEL 555
Query: 230 TGMSLSPDGSYLLTNGMDCKLCI 252
G+ + L M C L +
Sbjct: 556 VGVYTGQMSNVLSVQFMACNLLL 578
Score = 182 (69.1 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 28 PYSAPQAPGPNGKQRTSSLES-----PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIF 82
P+S A G + RT+ L S P+ + GH + V +KF+P +A+GS D+ +
Sbjct: 394 PFSLYFASGSH--DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 83 LWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
LW + + GH+ +L L ++ +G + SA D+ L+ WD+ +G K++ H
Sbjct: 452 LWSAQQG-NSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHT 510
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
+ S S L+ S S D + ++WD+R
Sbjct: 511 DSITSLAFSPDSG-LIASASMDNSVRVWDIR 540
Score = 164 (62.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 44/191 (23%), Positives = 80/191 (41%)
Query: 158 VVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++S S+D + + WD+ + Y + V S S +G D ++W +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRT 416
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276
GH + + P+ +YL T D + +W A Q V++ GH+
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS----AQQGNSVRLFTGHRGP-- 470
Query: 277 KNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
+L +SP+G + + D+ + +WD S + +L GHT S+ F +I S
Sbjct: 471 --VLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASA 528
Query: 337 SSDKQIYLGEI 347
S D + + +I
Sbjct: 529 SMDNSVRVWDI 539
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
+ L TGH+ V ++ F+P G +AS D+ + LW + F L+GH ++I L ++
Sbjct: 461 VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL-FKELRGHTDSITSLAFS 519
Query: 110 TDGSQIISASPDKTLRAWDVET 131
D I SAS D ++R WD+ +
Sbjct: 520 PDSGLIASASMDNSVRVWDIRS 541
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 252 (93.8 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 100/351 (28%), Positives = 150/351 (42%)
Query: 2 EVVTHQRENE--NALSTVSARPMEWST-VPYSAPQAPGPNGKQ-RTSSLESPIMLLTGHQ 57
E H E A+S + R S VP +GK R + S + H
Sbjct: 246 ETSDHTEETSPVRAISRAATRRSVSSIPVPQDVVDTHPASGKDVRVPTTASYVF--DAHD 303
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQII 116
V ++F+P ++A+G DR + LW GD C+ L G I + + + G+ ++
Sbjct: 304 GEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAYLL 363
Query: 117 SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG 176
+AS D R W V+ + + H+ V S +VSGS D T KLWD+R +
Sbjct: 364 AASNDFASRIWTVDDYRLRHTLTGHSGKVLSA-KFLLDNARIVSGSHDRTLKLWDLRSKV 422
Query: 177 A--------IQTFPDKYQI-TAVSFSDASDKIYT------GGIDNDVKVWDLRKGEV--S 219
+ TF I T + S +D + T G D ++ WD+R V
Sbjct: 423 CEEMQSLCVLMTFAFLLGIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESVVRE 482
Query: 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279
M L G IT + L+P+ + LL+ D L I D+R A +K +F
Sbjct: 483 MELLGK---ITALDLNPERTELLSCSRDDLLKIIDLRTNA-----IK------QSFSAPG 528
Query: 280 LKCG--W-----SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG-HTGSVN 322
KCG W SPDGS V AGS+D +Y+W + ++ L H+ S+N
Sbjct: 529 FKCGSDWTRVVFSPDGSYVAAGSADGSLYVWSVLTGKVEKVLSKQHSSSIN 579
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 251 (93.4 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 76/293 (25%), Positives = 137/293 (46%)
Query: 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS 119
V ++ +N GT++A+GS+D +W +G+ + L HK I L W G+ I+SA
Sbjct: 234 VTSLDWNSDGTLLATGSYDGFARIWTENGNLAS--TLGQHKGPIFALKWNKKGNYILSAG 291
Query: 120 PDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ 179
DKT WD TG+ ++ H++ + + S S D + + ++
Sbjct: 292 VDKTTIIWDAHTGEAKQQFPFHSA--PALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVK 349
Query: 180 TFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI-------TG 231
TF ++ A+ + + + + D +K+W +++ LQ H+ I TG
Sbjct: 350 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTG 409
Query: 232 MSLS-PDGSYLLTNG-MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289
+ S P+ S +L + D + +WDM Q C L HQ + + +SPDG
Sbjct: 410 PTTSNPNSSIMLASASFDSTVRLWDME----QGVCTHTLRKHQ----EPVYSVAFSPDGK 461
Query: 290 KVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ +GS D+ V+IW+T S +++ G TG + E ++A +G+ +SD +
Sbjct: 462 YLASGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEVCWNAQGDKVGASASDGSV 513
Score = 239 (89.2 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 69/260 (26%), Positives = 116/260 (44%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQ 114
H+ ++ +K+N G I S D+ +W H G+ K H LD+ W + +
Sbjct: 271 HKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPF--HSAPALDVDWQNN-TT 327
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
S S D + + + +K H + VN+ G L+ S SDD T K+W M+Q
Sbjct: 328 FASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQ 386
Query: 175 RGAI--------QTFPDKYQITAVSFSDASDKIY--TGGIDNDVKVWDLRKGEVSMTLQG 224
+ + + K+ T + S+ + I + D+ V++WD+ +G + TL+
Sbjct: 387 DACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRK 446
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
HQ+ + ++ SPDG YL + D + IW+ + V +G FE C W
Sbjct: 447 HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ----SGSLVHSYQGTGGIFEV----C-W 497
Query: 285 SPDGSKVTAGSSDRMVYIWD 304
+ G KV A +SD V + D
Sbjct: 498 NAQGDKVGASASDGSVCVLD 517
Score = 217 (81.4 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 79/316 (25%), Positives = 131/316 (41%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD---CKNFMVLK------GH--- 99
+L GH+S V+ +NP ++ASGS D +W+++ + +VL+ GH
Sbjct: 170 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVP 229
Query: 100 -KNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLV 158
+ L W +DG+ + + S D R W E G + +H + + +++G ++
Sbjct: 230 SNKDVTSLDWNSDGTLLATGSYDGFARIW-TENGNLASTLGQHKGPIFALKWNKKGNYIL 288
Query: 159 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG-GIDNDVKVWDLRKGE 217
+G D T +WD A Q FP + A+ ++ + D + V L
Sbjct: 289 SAGVDKTTI-IWDAHTGEAKQQFPF-HSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDR 346
Query: 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277
T QGH + + + P G L + D L IW M+ Q+ CV L+ H+ K
Sbjct: 347 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK----QDACVHNLQAHR----K 398
Query: 278 NLLKCGWSPDG--------SKVTAGSS-DRMVYIWDTTSRRILYKLPGHTGSVNESVFHA 328
+ WSP G S + A +S D V +WD + L H V F
Sbjct: 399 EIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSP 458
Query: 329 TEPVIGSCSSDKQIYL 344
+ S S DK +++
Sbjct: 459 DGKYLASGSFDKCVHI 474
Score = 181 (68.8 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 53/179 (29%), Positives = 84/179 (46%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILD 105
+ P+ GH + V +K++P+G ++AS S D + +W + D C + L+ H+ I
Sbjct: 345 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHN--LQAHRKEIYT 402
Query: 106 LHWTTDG-------SQII--SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156
+ W+ G S I+ SAS D T+R WD+E G + +H V S S G
Sbjct: 403 IKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKY 462
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L SGS D +W+ + + ++ I V ++ DK+ D V V DLRK
Sbjct: 463 LA-SGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNAQGDKVGASASDGSVCVLDLRK 520
>TAIR|locus:2172084 [details] [associations]
symbol:AT5G54520 "AT5G54520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 IPI:IPI00547624 RefSeq:NP_200263.2
UniGene:At.29492 ProteinModelPortal:F4K0D3 SMR:F4K0D3 PRIDE:F4K0D3
EnsemblPlants:AT5G54520.1 GeneID:835540 KEGG:ath:AT5G54520
OMA:PPFKLNK Uniprot:F4K0D3
Length = 457
Score = 244 (91.0 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 89/328 (27%), Positives = 144/328 (43%)
Query: 37 PNGKQRTSSLESPIML-LTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHV-HGDCKNF 93
P G + + S + + LTGH AV + ++ + ++AS D +++W+V D K
Sbjct: 139 PKGSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKV 198
Query: 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSF-VNSCCPSR 152
H + D+ W+ G ++S D T R +DVE G + + E V P
Sbjct: 199 RAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDN 258
Query: 153 RGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGID------ 205
+ +SG G+ +LWD+R + + D I V F A K + D
Sbjct: 259 CN--VFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFI-AGGKQFISSSDVSGRNI 315
Query: 206 --NDVKVWDLRKGEVSMTLQGHQDMITGMSLS--PDGSYLLTNGMDCKLCIWDMRPYAPQ 261
N V VWD+ + EV ++ Q + + T + P + I+ P
Sbjct: 316 SENAVIVWDISR-EVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKL 374
Query: 262 NRCVKILEGHQ-HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGS 320
N+ K EGH F +KC +SPDG + +GSSD VY++D S ++ KL +
Sbjct: 375 NK-YKRFEGHWVAGFP---IKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQP 430
Query: 321 -VNESVFHATEP-VIGSCSSDKQIYLGE 346
VN S +H P V+ +CS + Q+ + E
Sbjct: 431 CVNVS-YHPVLPNVVAACSWNGQVSVFE 457
Score = 40 (19.1 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 10 NENALSTVSARPMEWSTVPYSAPQ 33
NE S ++A P S PY P+
Sbjct: 21 NERLTSKIAAAPSIPSKRPYPVPE 44
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 250 (93.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 58/207 (28%), Positives = 100/207 (48%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH+ + +K++P+G I S SHD LW + ++ +GH + L + DG
Sbjct: 261 LVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTH-QELLLQEGHDKGVFSLSFQCDG 319
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
S + S D WD+ +G ++ +A H+ + + S G V +G DG +WD+
Sbjct: 320 SLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQ-VATGGGDGIINVWDI 378
Query: 173 RQR--GAI-QTFPDKYQITAVSFS--DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
R+R G + Q + +T V FS D K+ + G DN + V+ +L GH D
Sbjct: 379 RKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTD 438
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWD 254
I + +S + +L++ G D + +W+
Sbjct: 439 KIISLDISNNSHFLVSGGWDRSIKLWN 465
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 68/288 (23%), Positives = 128/288 (44%)
Query: 41 QRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK 100
QR ++LE L + + + + V+A+GS D+ + + L H
Sbjct: 160 QRMANLELAGSQLVSTKP-ISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHV 218
Query: 101 NAILDLHWTTDGS-QIISASPDKTLRAWDV--ETG--KQIKKMAEHNSFVNSCCPSRRGP 155
I + W D + Q+IS + D ++ + E G + + + H ++ G
Sbjct: 219 GKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGK 278
Query: 156 PLVVSGSDDGTAKLWDM--RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213
+ S S D T +LWD Q +Q DK + ++SF + +GG+D+ +WD+
Sbjct: 279 -FIGSASHDMTWRLWDASTHQELLLQEGHDK-GVFSLSFQCDGSLVCSGGMDSLSMLWDI 336
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
R G MTL GH I ++ SP+G + T G D + +WD+R + + +IL H++
Sbjct: 337 RSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRK-RDEGQLNQIL-AHRN 394
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
+ ++ G K+ + D ++ ++ + + + L GHT +
Sbjct: 395 IVTQ--VRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKI 440
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 251 (93.4 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L GH VY+ +F + + S S D I W + G N ++ +GH + D+ +
Sbjct: 337 VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDVDISPY 395
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
S S D+T R W + ++ A H + V+ C + +GS D T +LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVD-CVKFHPNSNYLATGSTDKTVRLWS 454
Query: 172 MRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+Q +++ F + + +++FS + + G D +K+WDL G + L+GH D IT
Sbjct: 455 AQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNIT 514
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMR 256
++ SPD S + + MD + +WD+R
Sbjct: 515 SLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 208 (78.3 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 55/203 (27%), Positives = 85/203 (41%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
+L GH V+ + +P ASGSHDR LW + GH + + +
Sbjct: 378 VLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYP-LRIYAGHLADVDCVKFHP 436
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
+ + + + S DKT+R W + G ++ H V S S G L +G D KLW
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ-RLKLW 495
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+ + IT+++FS S I + +DN V+VWD+R S G +
Sbjct: 496 DLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSEL 555
Query: 230 TGMSLSPDGSYLLTNGMDCKLCI 252
G+ + L M C L +
Sbjct: 556 VGVYTGQMSNVLSVQFMACNLLL 578
Score = 184 (69.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 45/151 (29%), Positives = 76/151 (50%)
Query: 28 PYSAPQAPGPNGKQRTSSLES-----PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIF 82
PYS A G + RT+ L S P+ + GH + V +KF+P +A+GS D+ +
Sbjct: 394 PYSLYFASGSH--DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 83 LWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
LW + + GH+ +L L ++ +G + SA D+ L+ WD+ +G K++ H
Sbjct: 452 LWSAQQG-NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHT 510
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
+ S S L+ S S D + ++WD+R
Sbjct: 511 DNITSLTFSPDSS-LIASASMDNSVRVWDIR 540
Score = 162 (62.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 43/191 (22%), Positives = 80/191 (41%)
Query: 158 VVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++S S+D + + WD+ + Y + V S S +G D ++W +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRT 416
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276
GH + + P+ +YL T D + +W A Q V++ GH+
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS----AQQGNSVRLFTGHRGP-- 470
Query: 277 KNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
+L +SP+G + + D+ + +WD S + +L GHT ++ F +I S
Sbjct: 471 --VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASA 528
Query: 337 SSDKQIYLGEI 347
S D + + +I
Sbjct: 529 SMDNSVRVWDI 539
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 251 (93.4 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 58/206 (28%), Positives = 100/206 (48%)
Query: 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD 111
+L GH VY+ +F + + S S D I W + G N ++ +GH + DL +
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDLDISPY 395
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
S S D+T R W + ++ A H + V+ C + +GS D T +LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVD-CVKFHPNSNYLATGSTDKTVRLWS 454
Query: 172 MRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
+Q +++ F + + +++FS + + G D +K+WDL G + L+GH D IT
Sbjct: 455 AQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNIT 514
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMR 256
++ SPD + + MD + +WD+R
Sbjct: 515 SLTFSPDSGLIASASMDNSVRVWDIR 540
Score = 205 (77.2 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 55/203 (27%), Positives = 85/203 (41%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
+L GH V+ + +P ASGSHDR LW + GH + + +
Sbjct: 378 VLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYP-LRIYAGHLADVDCVKFHP 436
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
+ + + + S DKT+R W + G ++ H V S S G L +G D KLW
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ-RLKLW 495
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+ + IT+++FS S I + +DN V+VWD+R S G +
Sbjct: 496 DLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSEL 555
Query: 230 TGMSLSPDGSYLLTNGMDCKLCI 252
G+ + L M C L +
Sbjct: 556 VGVYTGQMSNVLSVQFMACNLLL 578
Score = 182 (69.1 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 45/151 (29%), Positives = 76/151 (50%)
Query: 28 PYSAPQAPGPNGKQRTSSLES-----PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIF 82
PYS A G + RT+ L S P+ + GH + V +KF+P +A+GS D+ +
Sbjct: 394 PYSLYFASGSH--DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 83 LWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
LW + + GH+ +L L ++ +G + SA D+ L+ WD+ +G K++ H
Sbjct: 452 LWSAQQG-NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 510
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173
+ S S L+ S S D + ++WD+R
Sbjct: 511 DNITSLTFSPDSG-LIASASMDNSVRVWDIR 540
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 42/191 (21%), Positives = 80/191 (41%)
Query: 158 VVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216
++S S+D + + WD+ + Y + + S S +G D ++W +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRT 416
Query: 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276
GH + + P+ +YL T D + +W A Q V++ GH+
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS----AQQGNSVRLFTGHRGP-- 470
Query: 277 KNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336
+L +SP+G + + D+ + +WD S + +L GHT ++ F +I S
Sbjct: 471 --VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASA 528
Query: 337 SSDKQIYLGEI 347
S D + + +I
Sbjct: 529 SMDNSVRVWDI 539
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 248 (92.4 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 38 NGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK 97
+ K + ES GH VY F+P + S S D LW + N + K
Sbjct: 660 SNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSME-TMSNLVCYK 718
Query: 98 GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157
GH + D+ ++ G +AS D+T R W T I + ++ C R P +
Sbjct: 719 GHNFPVWDVSFSPFGFYFATASHDRTARLW---TTNHISPLRIFTGHLSDCNTVRFHPNI 775
Query: 158 --VVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLR 214
+ +GS+D +A+LW+++ ++ F + I V+FS + T G D V +WDL
Sbjct: 776 NYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLS 835
Query: 215 KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
G+ + GH + + S DGS L + DC + +WD++
Sbjct: 836 TGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 213 (80.0 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 48/143 (33%), Positives = 80/143 (55%)
Query: 43 TSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKN 101
T++ SP+ + TGH S T++F+P +A+GS+D+ LW + G C + GH+
Sbjct: 749 TTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVR--IFMGHRA 806
Query: 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSG 161
I + ++ DG + +A D ++ WD+ TGK++KKM H V S S G ++ SG
Sbjct: 807 PIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGS-ILASG 865
Query: 162 SDDGTAKLWDMRQ--RGAIQTFP 182
S D T +LWD+++ ++ T P
Sbjct: 866 SSDCTVRLWDVKKAFNSSLSTQP 888
Score = 186 (70.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 57/240 (23%), Positives = 97/240 (40%)
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
TT + + S S + + + + K H+ V C S L+ S S+D TA+
Sbjct: 646 TTANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLL-SCSEDTTAR 704
Query: 169 LWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
LW M + + + + VSFS T D ++W GH
Sbjct: 705 LWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLS 764
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ P+ +YL T D +W+++ +CV+I GH+ + +SPD
Sbjct: 765 DCNTVRFHPNINYLATGSNDKSARLWEIQT----GKCVRIFMGHR----APIYTVAFSPD 816
Query: 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
G + D V +WD ++ + + K+ GHT V F ++ S SSD + L ++
Sbjct: 817 GRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDV 876
Score = 170 (64.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 44/177 (24%), Positives = 83/177 (46%)
Query: 42 RTSSLE--SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGH 99
R S+E S ++ GH V+ + F+P G A+ SHDR LW + + GH
Sbjct: 704 RLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTN-HISPLRIFTGH 762
Query: 100 KNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV 159
+ + + + + + + S DK+ R W+++TGK ++ H + + + S G L
Sbjct: 763 LSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLAT 822
Query: 160 SGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
+G D LWD+ ++ + + ++ FS + +G D V++WD++K
Sbjct: 823 AGEDTSVI-LWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKK 878
Score = 152 (58.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 34 APGPNGKQ-RTSSLESP--IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC 90
A G N K R +++ + + GH++ +YT+ F+P G ++A+ D + LW +
Sbjct: 779 ATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTG- 837
Query: 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN 146
K + GH + L ++ DGS + S S D T+R WDV+ + +S +N
Sbjct: 838 KKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLIN 893
Score = 44 (20.5 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 11 ENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSL 46
+N + ++A P S +P +A PN ++L
Sbjct: 106 QNTTTPITAVPSSASAIPITATTTISPNTSSNITAL 141
Score = 37 (18.1 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 12 NALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSS 45
NA+++ + ST P + P P T+S
Sbjct: 50 NAVTSTPSPTTTTSTAPSTPTPTPTPTPNPNTTS 83
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 78/255 (30%), Positives = 116/255 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++ + G+ + L GH + + D +Q
Sbjct: 54 SWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQ 112
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
II++S D T WD+ETG+Q A H+ V S + G V SG+ D + KLWD+R
Sbjct: 113 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV-SGACDASIKLWDVRD 171
Query: 175 RGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233
QTF + I AV+F TG D +++DLR + + + H ++I G++
Sbjct: 172 SMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGIT 230
Query: 234 ---LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGS 289
S G LL D IWD A + +L GH N + C G + DG
Sbjct: 231 SVAFSRSGRLLLAGYDDFNCNIWD----AMKGDRAGVLAGHD-----NRVSCLGVTDDGM 281
Query: 290 KVTAGSSDRMVYIWD 304
V GS D + IW+
Sbjct: 282 AVATGSWDSFLKIWN 296
Score = 215 (80.7 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 56/214 (26%), Positives = 98/214 (45%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 7 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 66
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQT---FPDKY-QITAVSFSDASDKIYTGGIDNDVKV 210
V G D ++ ++ R G ++ P ++ F D ++I T D +
Sbjct: 67 -FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCAL 124
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ ++ GH + +SL+PDG ++ D + +WD+R + C + G
Sbjct: 125 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVR----DSMCRQTFIG 180
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H E ++ + P+G T GS D ++D
Sbjct: 181 H----ESDINAVAFFPNGYAFTTGSDDATCRLFD 210
Score = 201 (75.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 54/205 (26%), Positives = 92/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F +I S S D LW + + + GH ++ L DG
Sbjct: 95 LPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETG-QQTVGFAGHSGDVMSLSLAPDG 152
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D +++ WDV + H S +N+ G +GSDD T +L+D+
Sbjct: 153 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT-TGSDDATCRLFDL 211
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + + D IT+V+FS + + G D + +WD KG+ + L GH + +
Sbjct: 212 RADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV 271
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 272 SCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 138 (53.6 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 40/175 (22%), Positives = 72/175 (41%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN ++ L
Sbjct: 25 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKT 84
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ D + ++G D +WD+ + V GH
Sbjct: 85 REGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIET---GQQTVGFA-GH 139
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVF 326
+ ++ +PDG +G+ D + +WD GH +N F
Sbjct: 140 SGD----VMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 190
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 77/300 (25%), Positives = 150/300 (50%)
Query: 56 HQSAVYTM-----KFNPAGTVIASGSHDRDIFLWHVHGDCKNFM-VLKGHKNAILDLHWT 109
H A++++ K N + TVI SGS D + +W + + + L+GH+ ++ + +
Sbjct: 15 HDDAIWSVAWGKNKKNGSETVI-SGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDIS 73
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKM--AEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
GS S+S D +R WD+ETGKQIK + +++ + P + + +GS G
Sbjct: 74 HTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQ---FLATGSHVGKV 130
Query: 168 KLWDM---RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG 224
++ + ++ ++ T K+ I ++++S + +G ID + ++D+ G++ TL+G
Sbjct: 131 NIFGVETGKKEYSLDT-RGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
H I ++ SPD L+T D + I+D++ +A L GH ++ N+ C
Sbjct: 189 HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HA---NLAGTLSGHG-SWVLNVAFC-- 241
Query: 285 SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
PD + + SSD+ V +WD +R ++ H V ++ + I S D++I++
Sbjct: 242 -PDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHI 300
Score = 207 (77.9 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 62/253 (24%), Positives = 115/253 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GHQ V ++ + G++ AS S D I LW + + + G +A L ++ D
Sbjct: 60 LEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDA-WSLAFSPDS 118
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+ + S + + VETGK+ + F+ S S G L SG+ DG ++D+
Sbjct: 119 QFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI 177
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
+ T I +++FS S + T D +K++D++ ++ TL GH +
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLN 237
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
++ PD ++ +++ D + +WD A CV HQ + ++ GSK+
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWD----AGTRTCVHTFFDHQDQ----VWGVKYNGSGSKI 289
Query: 292 TAGSSDRMVYIWD 304
+ D+ ++I+D
Sbjct: 290 VSVGDDQEIHIYD 302
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 44/199 (22%), Positives = 88/199 (44%)
Query: 152 RRGPPLVVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVS--FSDASDKIYTGGIDNDV 208
+ G V+SGS D K+W ++ +Q + +Q+ VS S + +D +
Sbjct: 29 KNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHI 88
Query: 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268
++WDL G+ ++ ++ SPD +L T K+ I+ + + L
Sbjct: 89 RLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYS----L 144
Query: 269 EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA 328
+ K +L +SPDG + +G+ D ++ I+D + ++L+ L GH + F
Sbjct: 145 DTRG----KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 329 TEPVIGSCSSDKQIYLGEI 347
++ + S D I + ++
Sbjct: 201 DSQLLVTASDDGYIKIYDV 219
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 250 (93.1 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 64/257 (24%), Positives = 122/257 (47%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTL 124
F+P G ++A+G+ D+ I +W + + +L+GH+ I L + DG +++S S D+++
Sbjct: 263 FSPDGKLLATGAEDKLIRIWDLSTK-RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSV 321
Query: 125 RAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK 184
R WD+ T + ++ + V + S G L+ +GS D T ++WD ++
Sbjct: 322 RIWDLRTSQCSLTLSIEDG-VTTVAVSPDGK-LIAAGSLDRTVRVWDSTTGFLVERLDSG 379
Query: 185 YQ--------ITAVSFSDASDKIYTGGIDNDVKVWDL-----RKGEVSMTLQGHQDMITG 231
+ + +V+FS+ ++I +G +D VK+W L +K +T GH+D +
Sbjct: 380 NENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLS 439
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
+ +PD Y+L+ D + WD P + +L+GH+++ +
Sbjct: 440 VCCTPDNEYILSGSKDRGVIFWDQASGNP----LLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 292 TAGSSDRMVYIWDTTSR 308
GS D IW T +
Sbjct: 496 ATGSGDCKARIWKWTKK 512
Score = 231 (86.4 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 63/222 (28%), Positives = 104/222 (46%)
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++ DG + + + DK +R WD+ T + IK + H + S G LV SGS D +
Sbjct: 263 FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLV-SGSGDRSV 321
Query: 168 KLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ---- 223
++WD+R T + +T V+ S I G +D V+VWD G + L
Sbjct: 322 RIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE 381
Query: 224 ---GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ-NRCVKILEGHQHNFEKNL 279
GH+D + ++ S +G + + +D + +W + + + + C GH+ +F ++
Sbjct: 382 NGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHK-DFVLSV 440
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C +PD + +GS DR V WD S L L GH SV
Sbjct: 441 C-C--TPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSV 479
Score = 214 (80.4 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 57/221 (25%), Positives = 111/221 (50%)
Query: 99 HKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS--------------F 144
H + + + ++ DG + I+ +KT + ++V TG+ + K+ + +S +
Sbjct: 199 HSSVVCCVRFSRDG-KFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGG 203
+ S C S G L+ +G++D ++WD+ + I+ Q I ++ F D++ +G
Sbjct: 258 IRSVCFSPDGK-LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D V++WDLR + S+TL +D +T +++SPDG + +D + +WD R
Sbjct: 317 GDRSVRIWDLRTSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVER 375
Query: 264 CVKILE-GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW 303
E G+ H E ++ +S +G ++ +GS DR V +W
Sbjct: 376 LDSGNENGNGH--EDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 214 (80.4 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 62/222 (27%), Positives = 101/222 (45%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
I +L GH+ +Y++ F P G + SGS DR + +W + C + ++ + + +
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE---DGVTTVAV 346
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAE-------HNSFVNSCCPSRRGPPLVVSG 161
+ DG I + S D+T+R WD TG ++++ H V S S G + SG
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQ-IASG 405
Query: 162 SDDGTAKLW------DMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
S D T KLW D + + K + +V + ++ I +G D V WD
Sbjct: 406 SLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS 465
Query: 216 GEVSMTLQGHQDMI--TGMSLSPDGS--YLLTNGMDCKLCIW 253
G + LQGH++ + +SL+ G+ T DCK IW
Sbjct: 466 GNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 181 (68.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 52/169 (30%), Positives = 78/169 (46%)
Query: 183 DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLL 242
D Y I +V FS + TG D +++WDL + L+GH+ I + PDG L+
Sbjct: 255 DLY-IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLV 313
Query: 243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 302
+ D + IWD+R ++C L + E + SPDG + AGS DR V +
Sbjct: 314 SGSGDRSVRIWDLRT----SQCSLTL-----SIEDGVTTVAVSPDGKLIAAGSLDRTVRV 364
Query: 303 WDTTSRRILYKLP-------GHTGSVNESVFHATEPVIGSCSSDKQIYL 344
WD+T+ ++ +L GH SV F I S S D+ + L
Sbjct: 365 WDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKL 413
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 250 (93.1 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 64/257 (24%), Positives = 122/257 (47%)
Query: 65 FNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTL 124
F+P G ++A+G+ D+ I +W + + +L+GH+ I L + DG +++S S D+++
Sbjct: 263 FSPDGKLLATGAEDKLIRIWDLSTK-RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSV 321
Query: 125 RAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK 184
R WD+ T + ++ + V + S G L+ +GS D T ++WD ++
Sbjct: 322 RIWDLRTSQCSLTLSIEDG-VTTVAVSPDGK-LIAAGSLDRTVRVWDSTTGFLVERLDSG 379
Query: 185 YQ--------ITAVSFSDASDKIYTGGIDNDVKVWDL-----RKGEVSMTLQGHQDMITG 231
+ + +V+FS+ ++I +G +D VK+W L +K +T GH+D +
Sbjct: 380 NENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLS 439
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
+ +PD Y+L+ D + WD P + +L+GH+++ +
Sbjct: 440 VCCTPDNEYILSGSKDRGVIFWDQASGNP----LLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 292 TAGSSDRMVYIWDTTSR 308
GS D IW T +
Sbjct: 496 ATGSGDCKARIWKWTKK 512
Score = 231 (86.4 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 63/222 (28%), Positives = 104/222 (46%)
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++ DG + + + DK +R WD+ T + IK + H + S G LV SGS D +
Sbjct: 263 FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLV-SGSGDRSV 321
Query: 168 KLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ---- 223
++WD+R T + +T V+ S I G +D V+VWD G + L
Sbjct: 322 RIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE 381
Query: 224 ---GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ-NRCVKILEGHQHNFEKNL 279
GH+D + ++ S +G + + +D + +W + + + + C GH+ +F ++
Sbjct: 382 NGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHK-DFVLSV 440
Query: 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321
C +PD + +GS DR V WD S L L GH SV
Sbjct: 441 C-C--TPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSV 479
Score = 214 (80.4 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 57/221 (25%), Positives = 111/221 (50%)
Query: 99 HKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS--------------F 144
H + + + ++ DG + I+ +KT + ++V TG+ + K+ + +S +
Sbjct: 199 HSSVVCCVRFSRDG-KFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGG 203
+ S C S G L+ +G++D ++WD+ + I+ Q I ++ F D++ +G
Sbjct: 258 IRSVCFSPDGK-LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263
D V++WDLR + S+TL +D +T +++SPDG + +D + +WD R
Sbjct: 317 GDRSVRIWDLRTSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVER 375
Query: 264 CVKILE-GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW 303
E G+ H E ++ +S +G ++ +GS DR V +W
Sbjct: 376 LDSGNENGNGH--EDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 214 (80.4 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 62/222 (27%), Positives = 101/222 (45%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
I +L GH+ +Y++ F P G + SGS DR + +W + C + ++ + + +
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE---DGVTTVAV 346
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAE-------HNSFVNSCCPSRRGPPLVVSG 161
+ DG I + S D+T+R WD TG ++++ H V S S G + SG
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQ-IASG 405
Query: 162 SDDGTAKLW------DMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
S D T KLW D + + K + +V + ++ I +G D V WD
Sbjct: 406 SLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS 465
Query: 216 GEVSMTLQGHQDMI--TGMSLSPDGS--YLLTNGMDCKLCIW 253
G + LQGH++ + +SL+ G+ T DCK IW
Sbjct: 466 GNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 181 (68.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 52/169 (30%), Positives = 78/169 (46%)
Query: 183 DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLL 242
D Y I +V FS + TG D +++WDL + L+GH+ I + PDG L+
Sbjct: 255 DLY-IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLV 313
Query: 243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 302
+ D + IWD+R ++C L + E + SPDG + AGS DR V +
Sbjct: 314 SGSGDRSVRIWDLRT----SQCSLTL-----SIEDGVTTVAVSPDGKLIAAGSLDRTVRV 364
Query: 303 WDTTSRRILYKLP-------GHTGSVNESVFHATEPVIGSCSSDKQIYL 344
WD+T+ ++ +L GH SV F I S S D+ + L
Sbjct: 365 WDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKL 413
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 242 (90.2 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 79/257 (30%), Positives = 118/257 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++ + G+ + L GH + + D +Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQ 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q A H V S P R L VSG+ D +AKLWD+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTR---LFVSGACDASAKLWDI 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R+ QTF + I A+ F + TG D +++DLR + M + H ++I G
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM-VYSHDNIICG 272
Query: 232 MS---LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
++ S G LL D +WD +R +L GH N + C G + D
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCNVWDT---LKADRA-GVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 208 (78.3 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 55/214 (25%), Positives = 98/214 (45%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPDKY----QITAVSFSDASDKIYTGGIDNDVKV 210
V G D ++ ++ R G ++ + ++ F D ++I T D +
Sbjct: 111 -YVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SL+PD ++ D +WD+R + C + G
Sbjct: 169 WDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIR----EGMCRQTFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H+ + N + C + P+G+ GS D ++D
Sbjct: 225 HESDI--NAI-C-FFPNGNAFATGSDDATCRLFD 254
Score = 203 (76.5 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 53/205 (25%), Positives = 90/205 (43%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F ++ S S D LW + + GH ++ L D
Sbjct: 139 LAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETG-QQTTTFAGHTGDVMSLSLAPDT 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WD+ G + H S +N+ C G +GSDD T +L+D+
Sbjct: 197 RLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + + D IT+V+FS + + G D + VWD K + + L GH + +
Sbjct: 256 RADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/188 (21%), Positives = 72/188 (38%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN ++ L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ D + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIET----GQQTTTFAGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ +PD +G+ D +WD GH +N F
Sbjct: 184 TGD----VMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGN 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 242 (90.2 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 80/257 (31%), Positives = 118/257 (45%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ + L GH + + DG Q
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDG-Q 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL--VVSGSDDGTAKLWDM 172
II++S D T WD+ETG+Q H+ V S S P L VSG+ D ++KLWD+
Sbjct: 157 IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLS---PDLKTFVSGACDASSKLWDI 213
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R Q+F I AVSF + TG D +++DLR + + L H ++I G
Sbjct: 214 RDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQ-ELLLYSHDNIICG 272
Query: 232 MS---LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
++ S G LL D +WD A + +L GH N + C G + D
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCSVWD----ALKGGRSGVLAGHD-----NRVSCLGVTDD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLRIWN 340
Score = 198 (74.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F G +I S S D LW + + GH ++ L + D
Sbjct: 139 LPGHTGYLSCCRFLDDGQIITS-SGDTTCALWDIETG-QQTTTFTGHSGDVMSLSLSPDL 196
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D + + WD+ G + H S +N+ G +GSDD T +L+D+
Sbjct: 197 KTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFA-TGSDDATCRLFDL 255
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + + D IT+V+FS + + G D + VWD KG S L GH + +
Sbjct: 256 RADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRV 315
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 186 (70.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 55/214 (25%), Positives = 92/214 (42%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW D ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQT---FPDKY-QITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ P ++ F D I + G D +
Sbjct: 111 -YVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ + T GH + +SLSPD ++ D +WD+R C + G
Sbjct: 169 WDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIR----DGMCRQSFTG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H + N + + P G GS D ++D
Sbjct: 225 HISDI--NAVS--FFPSGYAFATGSDDATCRLFD 254
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/188 (22%), Positives = 75/188 (39%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 214 RKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G V S L GH ++ DG + ++G D +WD+ + GH
Sbjct: 129 REGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIET----GQQTTTFTGH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ ++ SPD +G+ D +WD GH +N F +
Sbjct: 184 SGD----VMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGY 239
Query: 332 VIGSCSSD 339
+ S D
Sbjct: 240 AFATGSDD 247
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 245 (91.3 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 62/221 (28%), Positives = 109/221 (49%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH+ +V + +P IA+ S D I +W + L GH I + W T
Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSAL-TFRLECTLFGHYRGISQVKWATGS 108
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+ SAS DKT+R WD E ++ + H ++V+S + G L+VSGS D T ++W++
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGT-LLVSGSWDETVRIWNL 167
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM-IT 230
+ ++ P + I +VS S T D ++WD+ G+ TL ++ ++
Sbjct: 168 QDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLS 227
Query: 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
+ + + YLL + ++ ++ +WD R +NR V+I + H
Sbjct: 228 NLQFTENRKYLLVSNLNSQIRLWDYR----RNRVVRIFDSH 264
Score = 201 (75.8 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 45/183 (24%), Positives = 88/183 (48%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +K+ +AS S D+ I +W C + LKGH N + + + G
Sbjct: 92 LFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRC-SVRCLKGHTNYVSSIDFNPLG 150
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+ ++S S D+T+R W+++ G ++ + H+ + S S G L + S DG A++WD+
Sbjct: 151 TLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGT-LCATASYDGMARIWDV 209
Query: 173 RQRGAIQTF--PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230
++T P ++ + F++ + +++ +++WD R+ V H +
Sbjct: 210 LSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRY 269
Query: 231 GMS 233
MS
Sbjct: 270 SMS 272
Score = 175 (66.7 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 51/245 (20%), Positives = 105/245 (42%)
Query: 77 HDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIK 136
H R I + H + L GH+ ++ + + + I ++S D T++ W T +
Sbjct: 32 HKR-IRNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLEC 90
Query: 137 KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDA 195
+ H ++ G + S SDD T ++WD +R +++ ++++ F+
Sbjct: 91 TLFGHYRGISQV-KWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPL 149
Query: 196 SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255
+ +G D V++W+L+ G L H + I +S+S DG+ T D IWD+
Sbjct: 150 GTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDV 209
Query: 256 RPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315
+C+K L N + L+ ++ + + + + + +WD R++
Sbjct: 210 L----SGQCLKTLV-EPINVPLSNLQ--FTENRKYLLVSNLNSQIRLWDYRRNRVVRIFD 262
Query: 316 GHTGS 320
H +
Sbjct: 263 SHVNT 267
Score = 168 (64.2 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 44/146 (30%), Positives = 75/146 (51%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHW 108
+ L GH + V ++ FNP GT++ SGS D + +W++ G C +L H I+ +
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTC--LRMLPAHSEPIISVSI 188
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEH-NSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ DG+ +AS D R WDV +G+ +K + E N +++ + L+VS +
Sbjct: 189 SADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNS-QI 247
Query: 168 KLWDMRQRGAIQTFPDKYQITAVSFS 193
+LWD R+ ++ F D + T S S
Sbjct: 248 RLWDYRRNRVVRIF-DSHVNTRYSMS 272
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/160 (26%), Positives = 69/160 (43%)
Query: 181 FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSY 240
F + +T VS S I T D +K+W + TL GH I+ + + Y
Sbjct: 51 FGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKY 110
Query: 241 LLTNGMDCKLCIWDMRPYAPQNRC-VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRM 299
L + D + IWD + RC V+ L+GH N+ ++ ++P G+ + +GS D
Sbjct: 111 LASASDDKTIRIWDF-----EKRCSVRCLKGHT-NYVSSI---DFNPLGTLLVSGSWDET 161
Query: 300 VYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
V IW+ L LP H+ + A + + S D
Sbjct: 162 VRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYD 201
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280
TL GH+ +T +S+SP+ ++ T+ D + IW + + C L GH + +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLE--CT--LFGHYRGISQ--V 102
Query: 281 KCGWSPDGSKVTAGSSD-RMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339
K W+ GSK A +SD + + IWD R + L GHT V+ F+ ++ S S D
Sbjct: 103 K--WAT-GSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWD 159
Query: 340 KQI 342
+ +
Sbjct: 160 ETV 162
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 241 (89.9 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 79/257 (30%), Positives = 115/257 (44%)
Query: 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQ 114
S V T + P+G +A G D ++++ G+ K L H + + D S
Sbjct: 98 SWVMTCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNS- 156
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP--LVVSGSDDGTAKLWDM 172
I+++S D T WD+ETG+Q H C P L +SG+ D TAKLWD+
Sbjct: 157 IVTSSGDTTCALWDIETGQQKTVFLGHTG---DCMSLAVSPDFKLFISGACDATAKLWDV 213
Query: 173 RQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
R+ QTF + I A+ F + I TG D +++DLR + + + H+ +I G
Sbjct: 214 REGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQ-ELIVYSHESIICG 272
Query: 232 MS---LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPD 287
++ S G LL D IWD R V IL GH N + C G + D
Sbjct: 273 ITSVAFSRSGRLLLAGYDDFNCNIWDS---LKAER-VGILSGHD-----NRVSCLGVTAD 323
Query: 288 GSKVTAGSSDRMVYIWD 304
G V GS D + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 205 (77.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 53/214 (24%), Positives = 96/214 (44%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH I +HW+TD ++SAS D L WD T ++ + +S+V +C + G
Sbjct: 51 LRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 156 PLVVSGSDDGTAKLWDMRQR-GAIQTFPDKYQ----ITAVSFSDASDKIYTGGIDNDVKV 210
V G D +++++ R G ++ + ++ F D + I T D +
Sbjct: 111 -FVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLD-DNSIVTSSGDTTCAL 168
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WD+ G+ GH +++SPD ++ D +WD+R + C + G
Sbjct: 169 WDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVR----EGTCRQTFSG 224
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
H+ + N + C + P+G + GS D ++D
Sbjct: 225 HESDI--NAI-C-FFPNGEAICTGSDDATCRLFD 254
Score = 204 (76.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 57/206 (27%), Positives = 94/206 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTD 111
L+ H + +F +++ S S D LW + G K V GH + L + D
Sbjct: 139 LSAHTGYLSCCRFLDDNSIVTS-SGDTTCALWDIETGQQKT--VFLGHTGDCMSLAVSPD 195
Query: 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171
IS + D T + WDV G + + H S +N+ C G + +GSDD T +L+D
Sbjct: 196 FKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEA-ICTGSDDATCRLFD 254
Query: 172 MRQRGAIQTFPDKY---QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228
+R + + + IT+V+FS + + G D + +WD K E L GH +
Sbjct: 255 LRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNR 314
Query: 229 ITGMSLSPDGSYLLTNGMDCKLCIWD 254
++ + ++ DG + T D L IW+
Sbjct: 315 VSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 44/188 (23%), Positives = 77/188 (40%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL-- 213
L+VS S DG +WD + P + + +++ + + + GG+DN +++L
Sbjct: 69 LLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKT 128
Query: 214 RKG--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271
R+G +VS L H ++ D S + ++G D +WD+ Q + V + GH
Sbjct: 129 REGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSG-DTTCALWDIE--TGQQKTVFL--GH 183
Query: 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331
+ + SPD +G+ D +WD GH +N F
Sbjct: 184 TGD----CMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGE 239
Query: 332 VIGSCSSD 339
I + S D
Sbjct: 240 AICTGSDD 247
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 249 (92.7 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 66/237 (27%), Positives = 106/237 (44%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLH 107
S I L GH VY F + + S S D + W + N ++ +GH + D+
Sbjct: 345 SEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKS-FTNTVLYRGHAYPVWDVD 403
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
+ +AS D+T R W ++ A H S V+ C + +GS D T
Sbjct: 404 VSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVD-CVKFHPNSNYIATGSTDKTV 462
Query: 168 KLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
+LW RQ +++ F + + ++FS + + G D +K+WDL G + L+GH
Sbjct: 463 RLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHT 522
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY---APQNRCVKILEGHQHNFEKNLL 280
D I+ +S S D S + + MD + +WD+R AP + C L G N+L
Sbjct: 523 DTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNIL 579
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 60/211 (28%), Positives = 91/211 (43%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
L+GH + + TD S ++S S D T+R WD+++ H V S
Sbjct: 350 LRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCS- 408
Query: 156 PLVVS-GSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDL 213
L S S D TA+LW + ++ + + V F S+ I TG D V++W
Sbjct: 409 -LYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWST 467
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
R+G GH+ + ++ SP+G YL + G D +L +WD+ K L GH
Sbjct: 468 RQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLA----SGGLFKDLRGHTD 523
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
+S D S V + S D V +WD
Sbjct: 524 TISS----LSFSQDSSLVASASMDNTVRVWD 550
Score = 197 (74.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 52/203 (25%), Positives = 84/203 (41%)
Query: 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT 110
+L GH V+ + +P ++ SHDR LW + GH + + + +
Sbjct: 390 VLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSF-ARTYPLRLYAGHLSDVDCVKFHP 448
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170
+ + I + S DKT+R W G ++ H V + S G L +G D KLW
Sbjct: 449 NSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQ-RLKLW 507
Query: 171 DMRQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
D+ G + I+++SFS S + + +DN V+VWD+R S G +
Sbjct: 508 DLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSEL 567
Query: 230 TGMSLSPDGSYLLTNGMDCKLCI 252
G + L M C L +
Sbjct: 568 IGQYTGSTSNILNVQFMACNLLL 590
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 48/218 (22%), Positives = 89/218 (40%)
Query: 131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITA 189
+G +IK + H+ V L+ S S+D T + WD++ + Y +
Sbjct: 343 SGSEIKTLRGHSGPVYRTAFLTDASGLL-SCSEDSTVRYWDLKSFTNTVLYRGHAYPVWD 401
Query: 190 VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCK 249
V S S T D ++W + GH + + P+ +Y+ T D
Sbjct: 402 VDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKT 461
Query: 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309
+ +W R Q V++ GH+ +L +SP+G + + D+ + +WD S
Sbjct: 462 VRLWSTR----QGASVRLFTGHRGP----VLTLAFSPNGKYLASAGEDQRLKLWDLASGG 513
Query: 310 ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ L GHT +++ F ++ S S D + + +I
Sbjct: 514 LFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 76/251 (30%), Positives = 114/251 (45%)
Query: 62 TMKFNPAGTVIASGSHDRDIFLWHV---HGDCKNFMVLKGHKNAILDLHWTTDGSQIISA 118
T + P+G +A G D ++ + G+ + L GH + + D +QII++
Sbjct: 2 TCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIITS 60
Query: 119 SPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI 178
S D T WD+ETG+Q A H+ V S + G V SG+ D + KLWD+R
Sbjct: 61 SGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV-SGACDASIKLWDVRDSMCR 119
Query: 179 QTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMS---L 234
QTF + I AV+F TG D +++DLR + + + H ++I G++
Sbjct: 120 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGITSVAF 178
Query: 235 SPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTA 293
S G LL D IWD A + +L GH N + C G + DG V
Sbjct: 179 SRSGRLLLAGYDDFNCNIWD----AMKGDRAGVLAGHD-----NRVSCLGVTDDGMAVAT 229
Query: 294 GSSDRMVYIWD 304
GS D + IW+
Sbjct: 230 GSWDSFLKIWN 240
Score = 201 (75.8 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 54/205 (26%), Positives = 92/205 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GH + +F +I S S D LW + + + GH ++ L DG
Sbjct: 39 LPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETG-QQTVGFAGHSGDVMSLSLAPDG 96
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+S + D +++ WDV + H S +N+ G +GSDD T +L+D+
Sbjct: 97 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT-TGSDDATCRLFDL 155
Query: 173 RQRGAIQTFP-DKY--QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
R + + D IT+V+FS + + G D + +WD KG+ + L GH + +
Sbjct: 156 RADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV 215
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWD 254
+ + ++ DG + T D L IW+
Sbjct: 216 SCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 147 (56.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 48/189 (25%), Positives = 77/189 (40%)
Query: 136 KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSD 194
+++ H ++ SCC ++ S S D T LWD+ F + ++S +
Sbjct: 37 RELPGHTGYL-SCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP 94
Query: 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC-IW 253
+G D +K+WD+R T GH+ I ++ P+G Y T G D C ++
Sbjct: 95 DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNG-YAFTTGSDDATCRLF 153
Query: 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313
D+R A Q ++ H N + +S G + AG D IWD
Sbjct: 154 DLR--ADQEL---LMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGV 207
Query: 314 LPGHTGSVN 322
L GH V+
Sbjct: 208 LAGHDNRVS 216
>WB|WBGene00018014 [details] [associations]
symbol:F33G12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0019915 HSSP:P16649
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 KO:K13124
OMA:CKQGAVR EMBL:FO080686 RefSeq:NP_494926.1
ProteinModelPortal:Q19986 SMR:Q19986 IntAct:Q19986 STRING:Q19986
EnsemblMetazoa:F33G12.2 GeneID:173867 KEGG:cel:CELE_F33G12.2
UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2 InParanoid:Q19986
NextBio:881457 Uniprot:Q19986
Length = 305
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 74/273 (27%), Positives = 124/273 (45%)
Query: 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV--LKGHKNAILDLHWTTDGSQ 114
Q AV +++N G + D+ + LW+ K+ ++ G N +LD ++D SQ
Sbjct: 16 QGAVRAVRYNVDGNYCVTCGSDKTVKLWN---PLKSSLLKTYSGTGNEVLDAASSSDNSQ 72
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
I + D+ +DVETGKQ+++ H + VN+ + +V SGS D T + +D R
Sbjct: 73 IAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESS-VVFSGSMDCTMQAFDCRS 131
Query: 175 RGA--IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGM 232
R IQ F + +S +I G D + +V+ +R G +++ G D + +
Sbjct: 132 RSEKPIQIFNESTD-GILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMG--DSVNSV 188
Query: 233 SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292
S +PD + LL M + + D + + +GHQ+ K L C V
Sbjct: 189 SFTPDSNCLLAGVMGGIVRLIDKS----SGKLLASYKGHQNTEYK--LDCRVLQSIEHVA 242
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESV 325
+GS D VY++ I+ KL H V S+
Sbjct: 243 SGSEDGFVYVYSLLDSHIVSKLE-HPSKVIHSL 274
>UNIPROTKB|Q19986 [details] [associations]
symbol:F33G12.2 "Protein F33G12.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0019915 HSSP:P16649 GeneTree:ENSGT00700000104496
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR EMBL:FO080686
RefSeq:NP_494926.1 ProteinModelPortal:Q19986 SMR:Q19986
IntAct:Q19986 STRING:Q19986 EnsemblMetazoa:F33G12.2 GeneID:173867
KEGG:cel:CELE_F33G12.2 UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2
InParanoid:Q19986 NextBio:881457 Uniprot:Q19986
Length = 305
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 74/273 (27%), Positives = 124/273 (45%)
Query: 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV--LKGHKNAILDLHWTTDGSQ 114
Q AV +++N G + D+ + LW+ K+ ++ G N +LD ++D SQ
Sbjct: 16 QGAVRAVRYNVDGNYCVTCGSDKTVKLWN---PLKSSLLKTYSGTGNEVLDAASSSDNSQ 72
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
I + D+ +DVETGKQ+++ H + VN+ + +V SGS D T + +D R
Sbjct: 73 IAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESS-VVFSGSMDCTMQAFDCRS 131
Query: 175 RGA--IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGM 232
R IQ F + +S +I G D + +V+ +R G +++ G D + +
Sbjct: 132 RSEKPIQIFNESTD-GILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMG--DSVNSV 188
Query: 233 SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292
S +PD + LL M + + D + + +GHQ+ K L C V
Sbjct: 189 SFTPDSNCLLAGVMGGIVRLIDKS----SGKLLASYKGHQNTEYK--LDCRVLQSIEHVA 242
Query: 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESV 325
+GS D VY++ I+ KL H V S+
Sbjct: 243 SGSEDGFVYVYSLLDSHIVSKLE-HPSKVIHSL 274
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 248 (92.4 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 77/303 (25%), Positives = 143/303 (47%)
Query: 24 WSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFL 83
+S+ P +A + P R S + + + H V ++F+P ++A+G DR + L
Sbjct: 287 FSSSPENA-EVPSACADVRVPS--TALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKL 343
Query: 84 WHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN 142
W V G C+ L G I + + + GS +++AS D R W V+ + + H+
Sbjct: 344 WEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHS 403
Query: 143 SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDK-IYT 201
V S +VSGS D T KLWD+R + + + + ++ + +++ + +
Sbjct: 404 GKVLSA-RFLLDNARIVSGSYDRTLKLWDLRSK--VCSMKTVFAGSSCNDIVCTEQCVMS 460
Query: 202 GGIDNDVKVWDLRKGEVSMTLQGHQ-DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP 260
G D V+ WD+ + Q ++ +T + L+ D + LLT D + I D+R A
Sbjct: 461 GHFDKKVRFWDISYQNYHIQKQLNKLCRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAV 520
Query: 261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP-GHTG 319
+ + + + +SPDGS V AGS+D ++Y+W+ + ++ L GH+
Sbjct: 521 R----QTFNAQGFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSS 576
Query: 320 SVN 322
++N
Sbjct: 577 AIN 579
Score = 203 (76.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 67/258 (25%), Positives = 116/258 (44%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
LTG + + +++F+ AG+ + + S+D +W V D + L GH +L + D
Sbjct: 357 LTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD-DYRLRHTLTGHSGKVLSARFLLDN 415
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
++I+S S D+TL+ WD+ + K S N + + V+SG D + WD+
Sbjct: 416 ARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQ---CVMSGHFDKKVRFWDI 472
Query: 173 R-QRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL--QGHQ-- 226
Q IQ +K ++T++ + ++ T D+ VK+ DLR V T QG +
Sbjct: 473 SYQNYHIQKQLNKLCRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFKCG 532
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE-GHQHNFEKNLLKCGWS 285
T ++ SPDGS++ D L +W++ + K L+ GH WS
Sbjct: 533 SDFTRVTFSPDGSFVAAGSADGVLYLWNVLT----GKLEKTLDKGHSSAINS----VSWS 584
Query: 286 PDGSKVTAGSSDRMVYIW 303
G+ V + +W
Sbjct: 585 LSGAFVASVEKGSKAVLW 602
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 50/164 (30%), Positives = 73/164 (44%)
Query: 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKG--EVSMTLQGHQDMITGMSLSPDGSYLLT 243
++ AV FS S + TGG+D VK+W++ G E L G IT + GSYLL
Sbjct: 319 EVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLA 378
Query: 244 NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW 303
D IW + Y R L GH +L + D +++ +GS DR + +W
Sbjct: 379 ASNDFASRIWTVDDY----RLRHTLTGHSGK----VLSARFLLDNARIVSGSYDRTLKLW 430
Query: 304 DTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
D S+ K S N+ V TE + S DK++ +I
Sbjct: 431 DLRSKVCSMKTVFAGSSCNDIV--CTEQCVMSGHFDKKVRFWDI 472
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 230 (86.0 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 76/300 (25%), Positives = 150/300 (50%)
Query: 56 HQSAVYTM-----KFNPAGTVIASGSHDRDIFLWHVHGDCKNFM-VLKGHKNAILDLHWT 109
H A++++ K + + TVI SGS D + +W + + + L+GH+ ++ + +
Sbjct: 15 HDDAIWSVAWGKNKKDGSETVI-SGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDIS 73
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKM--AEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
GS S+S D +R WD+ETGKQIK + +++ + P + + +GS G
Sbjct: 74 HTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQ---FLATGSHVGKV 130
Query: 168 KLWDM---RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG 224
++ + ++ ++ T K+ I ++++S + +G ID + ++D+ G++ TL+G
Sbjct: 131 NIFGVETGKKEYSLDT-RGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 225 HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284
H I ++ SPD L+T D + I+D++ +A L GH ++ N+ C
Sbjct: 189 HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HA---NLAGTLSGHG-SWVLNVAFC-- 241
Query: 285 SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
PD + + SSD+ V +WD +R ++ H V ++ + I S D++I++
Sbjct: 242 -PDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHI 300
Score = 207 (77.9 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 62/253 (24%), Positives = 115/253 (45%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L GHQ V ++ + G++ AS S D I LW + + + G +A L ++ D
Sbjct: 60 LEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDA-WSLAFSPDS 118
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172
+ + S + + VETGK+ + F+ S S G L SG+ DG ++D+
Sbjct: 119 QFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI 177
Query: 173 RQRGAIQTFPDKYQ-ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITG 231
+ T I +++FS S + T D +K++D++ ++ TL GH +
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLN 237
Query: 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291
++ PD ++ +++ D + +WD A CV HQ + ++ GSK+
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWD----AGTRTCVHTFFDHQDQ----VWGVKYNGSGSKI 289
Query: 292 TAGSSDRMVYIWD 304
+ D+ ++I+D
Sbjct: 290 VSVGDDQEIHIYD 302
Score = 141 (54.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 44/197 (22%), Positives = 87/197 (44%)
Query: 154 GPPLVVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVS--FSDASDKIYTGGIDNDVKV 210
G V+SGS D K+W ++ +Q + +Q+ VS S + +D +++
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRL 90
Query: 211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270
WDL G+ ++ ++ SPD +L T K+ I+ + + L+
Sbjct: 91 WDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYS----LDT 146
Query: 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATE 330
K +L +SPDG + +G+ D ++ I+D + ++L+ L GH + F
Sbjct: 147 RG----KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 331 PVIGSCSSDKQIYLGEI 347
++ + S D I + ++
Sbjct: 203 QLLVTASDDGYIKIYDV 219
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 244 (91.0 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 60/209 (28%), Positives = 95/209 (45%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDL 106
S + +L GH VY F+P + S S D + LW + C + KGH + D
Sbjct: 534 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--LVGYKGHNYPVWDT 591
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
++ G +S D+ R W + + ++ A H + VN C V +GS D T
Sbjct: 592 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVN-CTRFHPNSNYVATGSADRT 650
Query: 167 AKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
+LWD+ ++ F K I +++FS + TG D V +WD+ G + L+GH
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGH 710
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
D + + S DG L + MD + +WD
Sbjct: 711 TDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 211 (79.3 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 57/211 (27%), Positives = 93/211 (44%)
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
+L GH + ++ D + ++S+S D T+R W ++T + HN V S G
Sbjct: 538 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 597
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDL 213
VSG D A+LW ++ F + F S+ + TG D V++WD+
Sbjct: 598 Y-YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
G GH+ I ++ SP+G +L T D ++ +WD+ V L+GH
Sbjct: 657 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG----HGLMVGELKGHTD 712
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
+ +S DG + +GS D V +WD
Sbjct: 713 T----VCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 187 (70.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 59/237 (24%), Positives = 99/237 (41%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN--SCCPSRRGPPLVVSGSDDGTAK 168
D S I S D R D +T ++K + H+ V S P R ++S S+DGT +
Sbjct: 512 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRN---YLLSSSEDGTVR 568
Query: 169 LWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
LW ++ + + Y + FS +GG D ++W + GH
Sbjct: 569 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 628
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ P+ +Y+ T D + +WD+ CV+I GH+ +SP+
Sbjct: 629 DVNCTRFHPNSNYVATGSADRTVRLWDVL----NGNCVRIFTGHKGPIHS----LTFSPN 680
Query: 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G + G++D V +WD ++ +L GHT +V F ++ S S D + L
Sbjct: 681 GRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 737
Score = 180 (68.4 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 43/136 (31%), Positives = 70/136 (51%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLH 107
P+ + GH + V +F+P +A+GS DR + LW V +G+C + GHK I L
Sbjct: 619 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR--IFTGHKGPIHSLT 676
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++ +G + + + D + WD+ G + ++ H V S SR G ++ SGS D T
Sbjct: 677 FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTV 735
Query: 168 KLWDMRQRGAIQTFPD 183
+LWD A++ F D
Sbjct: 736 RLWD-----AVKAFED 746
Score = 179 (68.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 38 NGKQRTSSLESPIMLL--TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G R SL++ L+ GH V+ +F+P G SG HDR LW + +
Sbjct: 564 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD-HYQPLRI 622
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
GH + + + + + + S D+T+R WDV G ++ H ++S S G
Sbjct: 623 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 682
Query: 156 PLVVSGSDDGTAKLWDMRQR---GAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD 212
+ +G+ DG LWD+ G ++ D + ++ FS + + +G +DN V++WD
Sbjct: 683 -FLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASGSMDNTVRLWD 739
Query: 213 LRK 215
K
Sbjct: 740 AVK 742
Score = 151 (58.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 43/192 (22%), Positives = 83/192 (43%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SDD ++ D + ++ + + SFS + + + D V++W L+
Sbjct: 515 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 574
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +GH + SP G Y ++ G D +W Y P ++I GH +
Sbjct: 575 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP----LRIFAGHLADV 630
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
N + + P+ + V GS+DR V +WD + + GH G ++ F + +
Sbjct: 631 --NCTR--FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLAT 686
Query: 336 CSSDKQIYLGEI 347
++D ++ L +I
Sbjct: 687 GATDGRVLLWDI 698
Score = 143 (55.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 191 SFSDASDKIYTGGIDNDV--KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC 248
S A+D +DV ++ D + L GH + G S SPD +YLL++ D
Sbjct: 506 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 565
Query: 249 KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSR 308
+ +W ++ + C+ +GH N+ + +SP G +G DR+ +W T
Sbjct: 566 TVRLWSLQTFT----CLVGYKGH--NYP--VWDTQFSPYGYYFVSGGHDRVARLWATDHY 617
Query: 309 RILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ L GH VN + FH + + S+D+ + L ++
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Score = 44 (20.5 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 13 ALSTVSARPMEWSTVPYSAPQAPGPNGKQ 41
A+S V+ P + VP +AP+A P+ +Q
Sbjct: 69 AVSAVA--PAGAAPVPAAAPEASAPHDRQ 95
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 244 (91.0 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 60/209 (28%), Positives = 95/209 (45%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDL 106
S + +L GH VY F+P + S S D + LW + C + KGH + D
Sbjct: 535 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--LVGYKGHNYPVWDT 592
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
++ G +S D+ R W + + ++ A H + VN C V +GS D T
Sbjct: 593 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVN-CTRFHPNSNYVATGSADRT 651
Query: 167 AKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
+LWD+ ++ F K I +++FS + TG D V +WD+ G + L+GH
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGH 711
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
D + + S DG L + MD + +WD
Sbjct: 712 TDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 211 (79.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 57/211 (27%), Positives = 93/211 (44%)
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
+L GH + ++ D + ++S+S D T+R W ++T + HN V S G
Sbjct: 539 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 598
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDL 213
VSG D A+LW ++ F + F S+ + TG D V++WD+
Sbjct: 599 Y-YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 657
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
G GH+ I ++ SP+G +L T D ++ +WD+ V L+GH
Sbjct: 658 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG----HGLMVGELKGHTD 713
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
+ +S DG + +GS D V +WD
Sbjct: 714 T----VCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 187 (70.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 59/237 (24%), Positives = 99/237 (41%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN--SCCPSRRGPPLVVSGSDDGTAK 168
D S I S D R D +T ++K + H+ V S P R ++S S+DGT +
Sbjct: 513 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRN---YLLSSSEDGTVR 569
Query: 169 LWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
LW ++ + + Y + FS +GG D ++W + GH
Sbjct: 570 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 629
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ P+ +Y+ T D + +WD+ CV+I GH+ +SP+
Sbjct: 630 DVNCTRFHPNSNYVATGSADRTVRLWDVL----NGNCVRIFTGHKGPIHS----LTFSPN 681
Query: 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G + G++D V +WD ++ +L GHT +V F ++ S S D + L
Sbjct: 682 GRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 738
Score = 180 (68.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 43/136 (31%), Positives = 70/136 (51%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLH 107
P+ + GH + V +F+P +A+GS DR + LW V +G+C + GHK I L
Sbjct: 620 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR--IFTGHKGPIHSLT 677
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++ +G + + + D + WD+ G + ++ H V S SR G ++ SGS D T
Sbjct: 678 FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTV 736
Query: 168 KLWDMRQRGAIQTFPD 183
+LWD A++ F D
Sbjct: 737 RLWD-----AVKAFED 747
Score = 179 (68.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 38 NGKQRTSSLESPIMLL--TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G R SL++ L+ GH V+ +F+P G SG HDR LW + +
Sbjct: 565 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD-HYQPLRI 623
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
GH + + + + + + S D+T+R WDV G ++ H ++S S G
Sbjct: 624 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 683
Query: 156 PLVVSGSDDGTAKLWDMRQR---GAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD 212
+ +G+ DG LWD+ G ++ D + ++ FS + + +G +DN V++WD
Sbjct: 684 -FLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASGSMDNTVRLWD 740
Query: 213 LRK 215
K
Sbjct: 741 AVK 743
Score = 151 (58.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 43/192 (22%), Positives = 83/192 (43%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SDD ++ D + ++ + + SFS + + + D V++W L+
Sbjct: 516 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 575
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +GH + SP G Y ++ G D +W Y P ++I GH +
Sbjct: 576 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP----LRIFAGHLADV 631
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
N + + P+ + V GS+DR V +WD + + GH G ++ F + +
Sbjct: 632 --NCTR--FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLAT 687
Query: 336 CSSDKQIYLGEI 347
++D ++ L +I
Sbjct: 688 GATDGRVLLWDI 699
Score = 143 (55.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 191 SFSDASDKIYTGGIDNDV--KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC 248
S A+D +DV ++ D + L GH + G S SPD +YLL++ D
Sbjct: 507 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 566
Query: 249 KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSR 308
+ +W ++ + C+ +GH N+ + +SP G +G DR+ +W T
Sbjct: 567 TVRLWSLQTFT----CLVGYKGH--NYP--VWDTQFSPYGYYFVSGGHDRVARLWATDHY 618
Query: 309 RILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ L GH VN + FH + + S+D+ + L ++
Sbjct: 619 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 657
Score = 43 (20.2 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 13 ALSTVSARPMEWSTVPYSAPQAPGPNGKQ 41
A+S V+ P + VP +AP+A P+ +Q
Sbjct: 70 AVSAVA--PAGAAPVPAAAPEAGAPHDRQ 96
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 244 (91.0 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 60/209 (28%), Positives = 95/209 (45%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDL 106
S + +L GH VY F+P + S S D + LW + C + KGH + D
Sbjct: 534 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--LVGYKGHNYPVWDT 591
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
++ G +S D+ R W + + ++ A H + VN C V +GS D T
Sbjct: 592 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVN-CTRFHPNSNYVATGSADRT 650
Query: 167 AKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
+LWD+ ++ F K I +++FS + TG D V +WD+ G + L+GH
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGH 710
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
D + + S DG L + MD + +WD
Sbjct: 711 TDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 211 (79.3 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 57/211 (27%), Positives = 93/211 (44%)
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
+L GH + ++ D + ++S+S D T+R W ++T + HN V S G
Sbjct: 538 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 597
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDL 213
VSG D A+LW ++ F + F S+ + TG D V++WD+
Sbjct: 598 Y-YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
G GH+ I ++ SP+G +L T D ++ +WD+ V L+GH
Sbjct: 657 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG----HGLMVGELKGHTD 712
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
+ +S DG + +GS D V +WD
Sbjct: 713 T----VCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 188 (71.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 59/238 (24%), Positives = 100/238 (42%)
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN--SCCPSRRGPPLVVSGSDDGTA 167
+D S I S D R D +T ++K + H+ V S P R ++S S+DGT
Sbjct: 511 SDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRN---YLLSSSEDGTV 567
Query: 168 KLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ 226
+LW ++ + + Y + FS +GG D ++W + GH
Sbjct: 568 RLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHL 627
Query: 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286
+ P+ +Y+ T D + +WD+ CV+I GH+ +SP
Sbjct: 628 ADVNCTRFHPNSNYVATGSADRTVRLWDVL----NGNCVRIFTGHKGPIHS----LTFSP 679
Query: 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
+G + G++D V +WD ++ +L GHT +V F ++ S S D + L
Sbjct: 680 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 737
Score = 181 (68.8 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 44/136 (32%), Positives = 70/136 (51%)
Query: 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLH 107
P+ + GH + V +F+P +A+GS DR + LW V +G+C + GHK I L
Sbjct: 619 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR--IFTGHKGPIHSLT 676
Query: 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTA 167
++ +G + + + D + WD+ G + ++ H V S SR G ++ SGS D T
Sbjct: 677 FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTV 735
Query: 168 KLWDMRQRGAIQTFPD 183
+LWD AI+ F D
Sbjct: 736 RLWD-----AIKAFED 746
Score = 179 (68.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 38 NGKQRTSSLESPIMLL--TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G R SL++ L+ GH V+ +F+P G SG HDR LW + +
Sbjct: 564 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD-HYQPLRI 622
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
GH + + + + + + S D+T+R WDV G ++ H ++S S G
Sbjct: 623 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 682
Query: 156 PLVVSGSDDGTAKLWDMRQR---GAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD 212
+ +G+ DG LWD+ G ++ D + ++ FS + + +G +DN V++WD
Sbjct: 683 -FLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASGSMDNTVRLWD 739
Query: 213 LRK 215
K
Sbjct: 740 AIK 742
Score = 151 (58.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 43/192 (22%), Positives = 83/192 (43%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SDD ++ D + ++ + + SFS + + + D V++W L+
Sbjct: 515 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 574
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +GH + SP G Y ++ G D +W Y P ++I GH +
Sbjct: 575 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP----LRIFAGHLADV 630
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
N + + P+ + V GS+DR V +WD + + GH G ++ F + +
Sbjct: 631 --NCTR--FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLAT 686
Query: 336 CSSDKQIYLGEI 347
++D ++ L +I
Sbjct: 687 GATDGRVLLWDI 698
Score = 146 (56.5 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 191 SFSDASDKIYTGGIDNDV--KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC 248
S ASD +DV ++ D + L GH + G S SPD +YLL++ D
Sbjct: 506 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 565
Query: 249 KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSR 308
+ +W ++ + C+ +GH N+ + +SP G +G DR+ +W T
Sbjct: 566 TVRLWSLQTFT----CLVGYKGH--NYP--VWDTQFSPYGYYFVSGGHDRVARLWATDHY 617
Query: 309 RILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ L GH VN + FH + + S+D+ + L ++
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Score = 42 (19.8 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 18 SARPMEWSTVPYSAPQAPGPNGKQ 41
+A P + VP +AP A P+ +Q
Sbjct: 72 AAAPAGAAPVPAAAPDAGAPHDRQ 95
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 248 (92.4 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 74/294 (25%), Positives = 145/294 (49%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHD-RDIFLWHVHGDCKNFMVLKGHKNAILDLHW 108
I LL+ QS + + N G +A GS + +W + + +GH +++ L +
Sbjct: 288 IHLLSISQSNIDVVSINKTGEWLAFGSSKFGQLLVWEWQSE-SYILKQQGHLDSMNALAY 346
Query: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168
+ DG +I++A+ D ++ WDV++G + EH S V +C S++G L S S DG+ +
Sbjct: 347 SPDGQRIVTAADDGKIKVWDVKSGFCLVTFTEHTSGVTACQFSKKGNVLFTS-SLDGSVR 405
Query: 169 LWDMRQRGAIQTF--PDKYQITAVSFSDASDKIYTGGIDN-DVKVWDLRKGEVSMTLQGH 225
WD+ + +TF P + ++++ + + I G D+ D+ VW ++ G++ L GH
Sbjct: 406 AWDLIRYRNFRTFTAPSRLSFSSLAVDPSGEVICAGSPDSFDIHVWSVQTGQLLDQLSGH 465
Query: 226 QDMITGMSLSPDGSYLLT--NGMDC-KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282
+ ++ ++ + DG++LLT + D ++ D R R + + C
Sbjct: 466 EGPVSALAFAADGNHLLTFWSVADAVQVAGIDGRRDISGGRKITDRTTAANAAGTKSFHC 525
Query: 283 -GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
+S DGS + A + + + ++D + ++ K +T SVN S+ T+ + S
Sbjct: 526 ITYSADGSCILAAGNSKYICLYDVLTGSLVKK---YTVSVNTSL-DGTQEYLNS 575
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 61/266 (22%), Positives = 108/266 (40%)
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAW--DVETGKQIKKMAEHNSFVNSCCPSR- 152
L GH + + + W++D +++AS D T R W D E G + ++ H V + S
Sbjct: 147 LAGHFDEVQHIEWSSDSRFLLTASKDLTARVWSLDPEDGFEPTTLSGHRQGVRAAFFSAD 206
Query: 153 --------RGPPLV----VSGSDDGTAK-LWDMRQRGAIQTFPDKYQITA--VSFSDASD 197
R L VS D T + + + R R + F + T +F AS+
Sbjct: 207 QESIYTVSRDCALFRWEYVSKKDPDTMEDVAEPRWRIVKKDFFQQPHATVKCAAFHAASN 266
Query: 198 KIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC-KLCIWDMR 256
+ G + +++L + L Q I +S++ G +L +L +W+
Sbjct: 267 LLVVGFSNGLFGLYELPEFNTIHLLSISQSNIDVVSINKTGEWLAFGSSKFGQLLVWE-- 324
Query: 257 PYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316
+ ++ +K +GH + N L +SPDG ++ + D + +WD S L
Sbjct: 325 -WQSESYILK-QQGHLDSM--NAL--AYSPDGQRIVTAADDGKIKVWDVKSGFCLVTFTE 378
Query: 317 HTGSVNESVFHATEPVIGSCSSDKQI 342
HT V F V+ + S D +
Sbjct: 379 HTSGVTACQFSKKGNVLFTSSLDGSV 404
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 245 (91.3 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 75/294 (25%), Positives = 134/294 (45%)
Query: 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS 119
V ++ +N GT++A+GS+D +W G+ + L HK I L W G+ I+SA
Sbjct: 224 VTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKWNKKGNFILSAG 281
Query: 120 PDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ 179
DKT WD TG+ ++ H++ + + S S D + + Q I+
Sbjct: 282 VDKTTIIWDAHTGEAKQQFPFHSA--PALDVDWQSNNTFASCSTDMCIHVCKLGQERPIK 339
Query: 180 TFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDG 238
TF ++ A+ + + + + D +K+W +++ LQ H I + SP G
Sbjct: 340 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTG 399
Query: 239 --------SYLLTNG--MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288
+ +L D + +WD A + C+ L HQ + + +SPDG
Sbjct: 400 PGTNNPNANLMLARSASFDSTVRLWD----AERGACIHTLTKHQ----EPVYSVAFSPDG 451
Query: 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342
+ +GS D+ V+IW+T S ++ G TG + E +++T +G+ +SD +
Sbjct: 452 RHLASGSFDKCVHIWNTQSGALVNSYRG-TGGIFEVCWNSTGDKVGASASDGSV 504
Score = 219 (82.2 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 69/261 (26%), Positives = 113/261 (43%)
Query: 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQ 114
H+ ++ +K+N G I S D+ +W H G+ K H LD+ W ++ +
Sbjct: 261 HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPF--HSAPALDVDWQSNNT- 317
Query: 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ 174
S S D + + + IK H + VN+ G L+ S SDD T KLW M+Q
Sbjct: 318 FASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKLWSMKQ 376
Query: 175 RGAI--------QTFPDKYQITAVSFSDASDKIY---TGGIDNDVKVWDLRKGEVSMTLQ 223
+ + + K+ T ++ + + + D+ V++WD +G TL
Sbjct: 377 DTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLT 436
Query: 224 GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283
HQ+ + ++ SPDG +L + D + IW+ + A V G FE C
Sbjct: 437 KHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGA----LVNSYRGTGGIFEV----C- 487
Query: 284 WSPDGSKVTAGSSDRMVYIWD 304
W+ G KV A +SD V + D
Sbjct: 488 WNSTGDKVGASASDGSVCVLD 508
Score = 210 (79.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 76/321 (23%), Positives = 130/321 (40%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC---KNFMVLK-----GH 99
S M+L GH+S V+ +NP ++ASGS D +W++ +VL+ G
Sbjct: 156 SKAMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGG 215
Query: 100 KNA-----ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
++ + L W ++G+ + + S D R W + G + +H + + +++G
Sbjct: 216 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 274
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG-GIDNDVKVWDL 213
++S D T +WD A Q FP + A+ S+ + D + V L
Sbjct: 275 N-FILSAGVDKTTIIWDAHTGEAKQQFPF-HSAPALDVDWQSNNTFASCSTDMCIHVCKL 332
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
+ T QGH + + + P G+ L + D L +W M+ Q+ CV L+ H
Sbjct: 333 GQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMK----QDTCVHDLQAHS- 387
Query: 274 NFEKNLLKCGWSPDGSKVT----------AGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
K + WSP G + S D V +WD ++ L H V
Sbjct: 388 ---KEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYS 444
Query: 324 SVFHATEPVIGSCSSDKQIYL 344
F + S S DK +++
Sbjct: 445 VAFSPDGRHLASGSFDKCVHI 465
Score = 186 (70.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 55/180 (30%), Positives = 82/180 (45%)
Query: 47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILD 105
E PI GH + V +K++P G ++AS S D + LW + D C + L+ H I
Sbjct: 335 ERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHD--LQAHSKEIYT 392
Query: 106 LHWTTDG-------SQII---SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
+ W+ G + ++ SAS D T+R WD E G I + +H V S S G
Sbjct: 393 IKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGR 452
Query: 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L SGS D +W+ + + ++ I V ++ DK+ D V V DLRK
Sbjct: 453 HLA-SGSFDKCVHIWNTQSGALVNSYRGTGGIFEVCWNSTGDKVGASASDGSVCVLDLRK 511
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 244 (91.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 60/209 (28%), Positives = 95/209 (45%)
Query: 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDL 106
S + +L GH VY F+P + S S D + LW + C + KGH + D
Sbjct: 294 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--LVGYKGHNYPVWDT 351
Query: 107 HWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT 166
++ G +S D+ R W + + ++ A H + VN C V +GS D T
Sbjct: 352 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVN-CTRFHPNSNYVATGSADRT 410
Query: 167 AKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGH 225
+LWD+ ++ F K I +++FS + TG D V +WD+ G + L+GH
Sbjct: 411 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGH 470
Query: 226 QDMITGMSLSPDGSYLLTNGMDCKLCIWD 254
D + + S DG L + MD + +WD
Sbjct: 471 TDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 211 (79.3 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 57/211 (27%), Positives = 93/211 (44%)
Query: 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRG 154
+L GH + ++ D + ++S+S D T+R W ++T + HN V S G
Sbjct: 298 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 357
Query: 155 PPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDVKVWDL 213
VSG D A+LW ++ F + F S+ + TG D V++WD+
Sbjct: 358 Y-YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 416
Query: 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273
G GH+ I ++ SP+G +L T D ++ +WD+ V L+GH
Sbjct: 417 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG----HGLMVGELKGHTD 472
Query: 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304
+ +S DG + +GS D V +WD
Sbjct: 473 T----VCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 189 (71.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 51/199 (25%), Positives = 91/199 (45%)
Query: 38 NGKQRTSSLESPIMLL--TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+G R SL++ L+ GH V+ +F+P G SG HDR LW + +
Sbjct: 324 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD-HYQPLRI 382
Query: 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155
GH + + + + + + S D+T+R WDV G ++ H ++S S G
Sbjct: 383 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 442
Query: 156 PLVVSGSDDGTAKLWDMRQR---GAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWD 212
+ +G+ DG LWD+ G ++ D + ++ FS + + +G +DN V++WD
Sbjct: 443 -FLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASGSMDNTVRLWD 499
Query: 213 LRKGEVSMTLQGHQDMITG 231
K + Q+++ G
Sbjct: 500 AVKAFEDLETDNSQELLLG 518
Score = 187 (70.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 59/237 (24%), Positives = 99/237 (41%)
Query: 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN--SCCPSRRGPPLVVSGSDDGTAK 168
D S I S D R D +T ++K + H+ V S P R ++S S+DGT +
Sbjct: 272 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRN---YLLSSSEDGTVR 328
Query: 169 LWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227
LW ++ + + Y + FS +GG D ++W + GH
Sbjct: 329 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 388
Query: 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287
+ P+ +Y+ T D + +WD+ CV+I GH+ +SP+
Sbjct: 389 DVNCTRFHPNSNYVATGSADRTVRLWDVL----NGNCVRIFTGHKGPIHS----LTFSPN 440
Query: 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344
G + G++D V +WD ++ +L GHT +V F ++ S S D + L
Sbjct: 441 GRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 497
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/192 (22%), Positives = 83/192 (43%)
Query: 157 LVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215
L+ SDD ++ D + ++ + + SFS + + + D V++W L+
Sbjct: 275 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 334
Query: 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275
+ +GH + SP G Y ++ G D +W Y P ++I GH +
Sbjct: 335 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP----LRIFAGHLADV 390
Query: 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335
N + + P+ + V GS+DR V +WD + + GH G ++ F + +
Sbjct: 391 --NCTR--FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLAT 446
Query: 336 CSSDKQIYLGEI 347
++D ++ L +I
Sbjct: 447 GATDGRVLLWDI 458
Score = 143 (55.4 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 191 SFSDASDKIYTGGIDNDV--KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC 248
S A+D +DV ++ D + L GH + G S SPD +YLL++ D
Sbjct: 266 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 325
Query: 249 KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSR 308
+ +W ++ + C+ +GH N+ + +SP G +G DR+ +W T
Sbjct: 326 TVRLWSLQTFT----CLVGYKGH--NYP--VWDTQFSPYGYYFVSGGHDRVARLWATDHY 377
Query: 309 RILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347
+ L GH VN + FH + + S+D+ + L ++
Sbjct: 378 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 416
Score = 136 (52.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 54/223 (24%), Positives = 89/223 (39%)
Query: 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112
L +Q + + ++IA G D + +W V K L+ K A DL
Sbjct: 226 LNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTP--KK---LRSVKQAA-DL------ 273
Query: 113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN--SCCPSRRGPPLVVSGSDDGTAKLW 170
S I S D R D +T ++K + H+ V S P R ++S S+DGT +LW
Sbjct: 274 SLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRN---YLLSSSEDGTVRLW 330
Query: 171 DMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMI 229
++ + + Y + FS +GG D ++W + GH +
Sbjct: 331 SLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV 390
Query: 230 TGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272
P+ +Y+ T D + +WD+ CV+I GH+
Sbjct: 391 NCTRFHPNSNYVATGSADRTVRLWDVL----NGNCVRIFTGHK 429
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 242 (90.2 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/237 (27%), Positives = 115/237 (48%)
Query: 72 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131
+A+G+ D + LW + L+GH + + + G ++SAS D T R WDV T
Sbjct: 238 LATGAADNTVCLWKA-SQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHT 296
Query: 132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAV 190
G ++ H+ + S G LV SG +D ++WD+R +I + QI A+
Sbjct: 297 GVELLMQEGHSEGIFSIACQPDGS-LVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAM 355
Query: 191 SFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDG--SYLLTNGMDC 248
++S ++ T D+ VK+WDLRK ++ T+ H +++ + G ++ T+G D
Sbjct: 356 AWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDG 415
Query: 249 KLCIWDMRPYAPQNRC--VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW 303
+ +W+ P N C +K + GH+ EK + G+ G + + DR + +W
Sbjct: 416 CVKLWN-----PLN-CSLIKSMVGHE---EKVMSVDGY---GDRFISSGYDRTIKLW 460
Score = 193 (73.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 50/235 (21%), Positives = 103/235 (43%)
Query: 98 GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC-----CPSR 152
G + I + ++ +G+ S S ++ W+ + +++ H V+ C +
Sbjct: 170 GGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAW 229
Query: 153 RGPP---LVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIYTGGIDNDV 208
+ +G+ D T LW Q + ++ V+F + D + + D
Sbjct: 230 DADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTW 289
Query: 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268
++WD+ G + +GH + I ++ PDGS + + G D IWD+R + + +L
Sbjct: 290 RLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLR----SGKSIMVL 345
Query: 269 EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323
+ H + ++ WSP+G ++ S+D V IWD + + +P H+ V++
Sbjct: 346 DEHI----RQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSD 396
Score = 183 (69.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 59/232 (25%), Positives = 102/232 (43%)
Query: 38 NGKQRTSSLESPIMLLT--GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV 95
+GK L+ ++ + G + + ++F+ G ASGS + +W+ + +
Sbjct: 151 SGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWN-SDNLSEVQL 209
Query: 96 LKGHKNAI--LDLH-----WTTDGSQIISAS--PDKTLRAWDVETGKQIKKMAEHNSFVN 146
+GH + + LD + W D Q+ A+ D T+ W + ++ H + V
Sbjct: 210 FRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVG 269
Query: 147 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDASDKIYTGGI 204
G LV S S D T +LWD+ G + + I +++ + +GG
Sbjct: 270 RVAFHPSGDYLV-SASFDTTWRLWDVHT-GVELLMQEGHSEGIFSIACQPDGSLVSSGGN 327
Query: 205 DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256
D ++WDLR G+ M L H I M+ SP+G L T+ D + IWD+R
Sbjct: 328 DAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLR 379
Score = 178 (67.7 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 39/163 (23%), Positives = 79/163 (48%)
Query: 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT 109
+++ GH ++++ P G++++SG +D +W + K+ MVL H I+ + W+
Sbjct: 300 LLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSG-KSIMVLDEHIRQIVAMAWS 358
Query: 110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSD-DGTAK 168
+G Q+ ++S D T++ WD+ + H+S V+ G ++ S DG K
Sbjct: 359 PNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVK 418
Query: 169 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVW 211
LW+ I++ ++ +S D+ + G D +K+W
Sbjct: 419 LWNPLNCSLIKSMVG-HEEKVMSVDGYGDRFISSGYDRTIKLW 460
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 46/198 (23%), Positives = 82/198 (41%)
Query: 160 SGSDDGTAKLWDMRQRGAIQTFP---------DKYQITAVSFSDASD-KIYTGGIDNDVK 209
SGS G K+W+ +Q F D Y + +D+ + TG DN V
Sbjct: 189 SGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVC 248
Query: 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269
+W + + L+GH + ++ P G YL++ D +WD+ + + E
Sbjct: 249 LWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVE----LLMQE 304
Query: 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT 329
GH + C PDGS V++G +D + IWD S + + L H + +
Sbjct: 305 GHSEGIFS--IAC--QPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPN 360
Query: 330 EPVIGSCSSDKQIYLGEI 347
+ + S+D + + ++
Sbjct: 361 GYQLATSSADDTVKIWDL 378
WARNING: HSPs involving 1649 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 347 0.00098 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1899
No. of states in DFA: 621 (66 KB)
Total size of DFA: 268 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.63u 0.12s 30.75t Elapsed: 00:00:02
Total cpu time: 30.76u 0.12s 30.88t Elapsed: 00:00:02
Start: Fri May 10 16:27:07 2013 End: Fri May 10 16:27:09 2013
WARNINGS ISSUED: 2