BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019014
(347 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|B Chain B, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|C Chain C, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|D Chain D, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3F55|A Chain A, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|B Chain B, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|C Chain C, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|D Chain D, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
Length = 316
Score = 390 bits (1001), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/317 (60%), Positives = 237/317 (74%), Gaps = 2/317 (0%)
Query: 31 TGVCYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAPNQATLQALRGSNIELLLGVPNSDLX 90
GVCYG G LP EV++LYK++NI RMR+Y PNQA L+ALRGSNIEL+LGVPNSDL
Sbjct: 2 VGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQ 61
Query: 91 XXXXXXXXXXXXXXXXXGDYANGVKFRYIAVGNEVSPLNGETTQYVSFLLPAMQNIRNAI 150
G + + V+FRYIAVGNE+SP+N T F+LPAM+NI +AI
Sbjct: 62 SLTNPSNAKSWVQKNVRG-FWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAI 120
Query: 151 LAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPY 210
+AGL +QIKVSTAID ++G++ PPS G FR DVR +L+P+IRFL ++PLL N+YPY
Sbjct: 121 RSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPY 180
Query: 211 ISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSE 270
+Y GN RDI L +ALFTS V V DGQ GY+NLFDA LDA+Y+ALE+A GGSL +VVSE
Sbjct: 181 FTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVSE 240
Query: 271 SGWPTAGGTAASVDNARTYNSNLIQHVKGGTPRKPGSAIETYVFAMFDENQKQGSEYEKH 330
SGWP+AG AA+ DN RTY SNLIQHVK GTP++P AIETY+FAMFDEN+KQ E EKH
Sbjct: 241 SGWPSAGAFAATFDNGRTYLSNLIQHVKRGTPKRPKRAIETYLFAMFDENKKQ-PEVEKH 299
Query: 331 WGLFLPNKQPKYSINFN 347
+GLF PNK KY++NF+
Sbjct: 300 FGLFFPNKWQKYNLNFS 316
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major
Allergen Endo-Beta-1,3-Glucanase Of Banana As A
Molecular Basis For The Latex-Fruit Syndrome
Length = 312
Score = 337 bits (863), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 183/316 (57%), Positives = 220/316 (69%), Gaps = 6/316 (1%)
Query: 32 GVCYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAPNQATLQALRGSNIELLLGVPNSDLXX 91
GVCYG G LP EVVSLYK NI RMRLY PNQA LQALR SNI++LL VP SD+
Sbjct: 2 GVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQS 61
Query: 92 XXXXXXXXXXXXXXXXGDYANGVKFRYIAVGNEVSPLNGETTQYVSFLLPAMQNIRNAIL 151
Y V FRYIAVGNE+ P + QY+ LPAM+NI NA+
Sbjct: 62 LASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIP-GSDLAQYI---LPAMRNIYNALS 117
Query: 152 AAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYI 211
+AGL NQIKVSTA+DT VLG + PPS G F + +L P+++FL N APLLVN+YPY
Sbjct: 118 SAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYF 177
Query: 212 SYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSES 271
SY GN I L +ALFT+ V VQDG+F Y+NLFDAI+DAV+AALE+ GG ++ +VVSES
Sbjct: 178 SYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSES 237
Query: 272 GWPTAGGTA-ASVDNARTYNSNLIQHVKGGTPRKPGSAIETYVFAMFDENQKQGSEYEKH 330
GWP+AGG A AS NA+TYN NLI+HV GGTPR+PG IE Y+F MF+ENQK G E++
Sbjct: 238 GWPSAGGGAEASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNENQKAGG-IEQN 296
Query: 331 WGLFLPNKQPKYSINF 346
+GLF PNKQP Y I+F
Sbjct: 297 FGLFYPNKQPVYQISF 312
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR7|B Chain B, Higher-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR8|A Chain A, Lower-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR8|B Chain B, Lower-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
Length = 323
Score = 310 bits (794), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 157/318 (49%), Positives = 212/318 (66%), Gaps = 8/318 (2%)
Query: 32 GVCYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAPNQATLQALRGSNIELLLGVPNSDLXX 91
GVCYG+ LPS+Q+V+ LY NI++MR+Y P+ AL+GSNIE++L VPN DL
Sbjct: 4 GVCYGKIANNLPSDQDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDLEA 63
Query: 92 XXXXXXXXXXXXXXXXGDYANGVKFRYIAVGNEVSPLNGETTQYVSFLLPAMQNIRNAIL 151
+ + VKF+YIAVGNEV P E+ +Y F+ PAM+NI NA+
Sbjct: 64 LANPSNANGWVQDNIRNHFPD-VKFKYIAVGNEVDP-GRESGKYARFVGPAMENIYNALS 121
Query: 152 AAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYI 211
+AGL NQIKVST+ + +L + PP FR + + F++P+I FL + PLL N+YPY
Sbjct: 122 SAGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEYKSFINPIIGFLARHNLPLLANIYPYF 181
Query: 212 SYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSES 271
+I NT + L +ALF R D GY+NLFDA++D++Y A EK GG ++ I+VSES
Sbjct: 182 GHIDNTNAVPLSYALFNQQ--RRNDT--GYQNLFDALVDSMYFATEKLGGQNIEIIVSES 237
Query: 272 GWPTAGGTAASVDNARTYNSNLIQHVK--GGTPRKPGSAIETYVFAMFDENQKQGSEYEK 329
GWP+ G AA++ NARTY +NLI HVK GTP+KPG IETY+FAMFDEN+K+G EK
Sbjct: 238 GWPSEGHPAATLKNARTYYTNLINHVKRGAGTPKKPGKTIETYLFAMFDENEKKGEASEK 297
Query: 330 HWGLFLPNKQPKYSINFN 347
H+GLF P+++PKY +NFN
Sbjct: 298 HFGLFNPDQRPKYQLNFN 315
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In
Complex With Laminaratriose
pdb|4GZJ|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In
Complex With Laminaratriose And Laminaratetrose
Length = 323
Score = 307 bits (786), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 156/318 (49%), Positives = 211/318 (66%), Gaps = 8/318 (2%)
Query: 32 GVCYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAPNQATLQALRGSNIELLLGVPNSDLXX 91
GVCYG+ LPS+Q+V+ LY NI++MR+Y P+ AL+GSNIE++L VPN DL
Sbjct: 4 GVCYGKIANNLPSDQDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDLEA 63
Query: 92 XXXXXXXXXXXXXXXXGDYANGVKFRYIAVGNEVSPLNGETTQYVSFLLPAMQNIRNAIL 151
+ + VKF+YIAVGNEV P E+ +Y F+ PAM+NI NA+
Sbjct: 64 LANPSNANGWVQDNIRNHFPD-VKFKYIAVGNEVDP-GRESGKYARFVGPAMENIYNALS 121
Query: 152 AAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYI 211
+AGL NQIKVST+ + +L + PP FR + + F++P+I FL + PLL N+YPY
Sbjct: 122 SAGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEYKSFINPIIGFLARHNLPLLANIYPYF 181
Query: 212 SYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSES 271
+I NT + L +ALF R D GY+NLFDA++D++Y A EK GG ++ I+VS S
Sbjct: 182 GHIDNTNAVPLSYALFNQQ--RRNDT--GYQNLFDALVDSMYFATEKLGGQNIEIIVSAS 237
Query: 272 GWPTAGGTAASVDNARTYNSNLIQHVK--GGTPRKPGSAIETYVFAMFDENQKQGSEYEK 329
GWP+ G AA++ NARTY +NLI HVK GTP+KPG IETY+FAMFDEN+K+G EK
Sbjct: 238 GWPSEGHPAATLKNARTYYTNLINHVKRGAGTPKKPGKTIETYLFAMFDENEKKGEASEK 297
Query: 330 HWGLFLPNKQPKYSINFN 347
H+GLF P+++PKY +NFN
Sbjct: 298 HFGLFNPDQRPKYQLNFN 315
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
pdb|1AQ0|B Chain B, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
pdb|1GHR|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
Length = 306
Score = 293 bits (749), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/315 (48%), Positives = 201/315 (63%), Gaps = 10/315 (3%)
Query: 32 GVCYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAPNQATLQALRGSNIELLLGVPNSDLXX 91
GVCYG LP+ VVS++K I+ MRLYAPNQA LQA+ G+ I +++G PN L
Sbjct: 2 GVCYGMSANNLPAASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLSN 61
Query: 92 XXXXXXXXXXXXXXXXGDYANGVKFRYIAVGNEVSPLNGETTQYVSFLLPAMQNIRNAIL 151
Y V FRY+ VGNEV+ G T L+PAM+N+ A++
Sbjct: 62 LAASPAAAASWVKSNIQAYPK-VSFRYVCVGNEVA--GGATRN----LVPAMKNVHGALV 114
Query: 152 AAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYI 211
AAGLG IKV+T++ +LG SPPS G+F + F+ PV++FL APL+ N+YPY+
Sbjct: 115 AAGLG-HIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNAPLMANIYPYL 173
Query: 212 SYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSES 271
++ N + + +ALF + V+DG +GY+NLFD +DA Y A+ K GG S+++VVSES
Sbjct: 174 AWAYNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSES 233
Query: 272 GWPTAGGTAASVDNARTYNSNLIQHVKGGTPRKPGSAIETYVFAMFDENQKQGSEYEKHW 331
GWP+ GGTAA+ NAR YN +LI HV GTPR PG AIETY+FAMF+ENQK S E++W
Sbjct: 234 GWPSGGGTAATPANARFYNQHLINHVGRGTPRHPG-AIETYIFAMFNENQKD-SGVEQNW 291
Query: 332 GLFLPNKQPKYSINF 346
GLF PN Q Y INF
Sbjct: 292 GLFYPNMQHVYPINF 306
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
pdb|1GHS|B Chain B, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
Length = 306
Score = 247 bits (630), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 186/316 (58%), Gaps = 12/316 (3%)
Query: 32 GVCYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAPNQATLQALRGSNIELLLGVPNSDLXX 91
GVCYG G LPS +VV LY+ I MR+Y + L ALR S I L+L + N L
Sbjct: 2 GVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLAN 61
Query: 92 XXXXXXXXXXXXXXXXGDYANGVKFRYIAVGNEVSPLNGETTQYVSFLLPAMQNIRNAIL 151
Y V +YIA GNEV G TQ + LPAM+N+ NA L
Sbjct: 62 IAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQ---GGATQSI---LPAMRNL-NAAL 114
Query: 152 AAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYI 211
+A IKVST+I + ++ PPS G F+ ++ V R L APLL N+YPY
Sbjct: 115 SAAGLGAIKVSTSIRFDEVANSFPPSAGVFK---NAYMTDVARLLASTGAPLLANVYPYF 171
Query: 212 SYIGNTRDIRLDFALFT-SDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSE 270
+Y N I L++A F VR Q+ Y +LFDA++DAVYAALEKAG ++++VVSE
Sbjct: 172 AYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSE 231
Query: 271 SGWPTAGGTAASVDNARTYNSNLIQHVKGGTPRKPGSAIETYVFAMFDENQKQGSEYEKH 330
SGWP+AGG AAS NARTYN LI HV GGTP+K A+ETY+FAMF+ENQK G E+
Sbjct: 232 SGWPSAGGFAASAGNARTYNQGLINHVGGGTPKKR-EALETYIFAMFNENQKTGDATERS 290
Query: 331 WGLFLPNKQPKYSINF 346
+GLF P+K P Y+I F
Sbjct: 291 FGLFNPDKSPAYNIQF 306
>pdb|2UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|3UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|4UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|1UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
Length = 437
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 34 CYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAP 65
C+GRDG L + + V+ +T Q MRL AP
Sbjct: 368 CFGRDGAQLAALRPEVAEQTETMEQAMRLLAP 399
>pdb|1E0D|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|1EEH|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
Length = 437
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 34 CYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAP 65
C+GRDG L + + V+ +T Q MRL AP
Sbjct: 368 CFGRDGAQLAALRPEVAEQTETMEQAMRLLAP 399
>pdb|2JFF|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2JFG|A Chain A, Crystal Structure Of Murd Ligase In Complex With Uma And
Adp
pdb|2JFH|A Chain A, Crystal Structure Of Murd Ligase In Complex With L-Glu
Containing Sulfonamide Inhibitor
pdb|2UUO|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2UUP|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2VTD|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2VTE|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2Y68|A Chain A, Structure-Based Design Of A New Series Of D-Glutamic Acid-
Based Inhibitors Of Bacterial Murd Ligase
pdb|2Y66|A Chain A, New 5-Benzylidenethiazolidine-4-One Inhibitors Of
Bacterial Murd Ligase: Design, Synthesis, Crystal
Structures, And Biological Evaluation
pdb|2Y67|A Chain A, New 5-Benzylidenethiazolidine-4-One Inhibitors Of
Bacterial Murd Ligase: Design, Synthesis, Crystal
Structures, And Biological Evaluation
pdb|2Y1O|A Chain A, Dual-target Inhibitor Of Murd And Mure Ligases: Design,
Synthesis And Binding Mode Studies
Length = 445
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 34 CYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAP 65
C+GRDG L + + V+ +T Q MRL AP
Sbjct: 369 CFGRDGAQLAALRPEVAEQTETMEQAMRLLAP 400
>pdb|2WJP|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Rhodanine Inhibitor
pdb|2X5O|A Chain A, Discovery Of Novel 5-Benzylidenerhodanine- And
5-Benzylidene- Thiazolidine-2,4-Dione Inhibitors Of Murd
Ligase
pdb|2XPC|A Chain A, Second-Generation Sulfonamide Inhibitors Of Murd: Activity
Optimisation With Conformationally Rigid Analogues Of D-
Glutamic Acid
Length = 439
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 34 CYGRDGTGLPSEQEVVSLYKQTNIQRMRLYAP 65
C+GRDG L + + V+ +T Q MRL AP
Sbjct: 368 CFGRDGAQLAALRPEVAEQTETMEQAMRLLAP 399
>pdb|2YFN|A Chain A, Galactosidase Domain Of Alpha-Galactosidase-Sucrose
Kinase, Agask
pdb|2YFO|A Chain A, Galactosidase Domain Of Alpha-Galactosidase-Sucrose
Kinase, Agask, In Complex With Galactose
Length = 720
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 197 VDNQAPLLVNLYP--YISYIGNT-RDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVY 253
V Q P+L+N + Y + G+T D+ + A D+V + DG FG RN ++ L +
Sbjct: 325 VHMQRPVLINSWEAAYFDFTGDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSL-GDW 383
Query: 254 AALEKAGGGSLRIVVS 269
E GGSL +++
Sbjct: 384 QVNETKLGGSLAELIT 399
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,660,079
Number of Sequences: 62578
Number of extensions: 388492
Number of successful extensions: 830
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 794
Number of HSP's gapped (non-prelim): 14
length of query: 347
length of database: 14,973,337
effective HSP length: 100
effective length of query: 247
effective length of database: 8,715,537
effective search space: 2152737639
effective search space used: 2152737639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)