Query 019017
Match_columns 347
No_of_seqs 161 out of 756
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 09:36:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019017.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019017hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 3.8E-45 1.3E-49 325.1 14.4 147 1-148 4-162 (169)
2 2p1m_A SKP1-like protein 1A; F 100.0 1.3E-42 4.4E-47 305.4 3.0 143 1-148 1-154 (160)
3 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 8.2E-41 2.8E-45 288.4 11.8 131 3-139 1-141 (141)
4 2ast_A S-phase kinase-associat 100.0 1.4E-40 4.9E-45 291.2 13.2 143 5-148 2-155 (159)
5 1hv2_A Elongin C, ELC1; protei 99.9 3.4E-25 1.2E-29 181.0 4.8 96 1-104 1-99 (99)
6 2fnj_C Transcription elongatio 99.9 1E-24 3.4E-29 177.2 4.5 95 4-104 1-96 (96)
7 1vcb_B Protein (elongin C); tu 99.9 2.2E-24 7.6E-29 180.3 5.4 96 3-104 16-112 (112)
8 4ajy_C Transcription elongatio 99.8 4.9E-22 1.7E-26 160.8 5.5 94 5-104 3-97 (97)
9 2vkp_A BTB/POZ domain-containi 98.3 2.8E-06 9.5E-11 67.4 9.6 96 4-118 9-108 (109)
10 2yy9_A Zinc finger and BTB dom 98.3 6.7E-07 2.3E-11 74.8 5.2 98 5-125 27-125 (135)
11 3htm_A Speckle-type POZ protei 98.2 1.3E-05 4.4E-10 68.1 10.5 104 5-127 36-140 (172)
12 2if5_A Zinc finger and BTB dom 98.1 1.7E-05 5.9E-10 64.1 10.4 93 4-115 26-119 (120)
13 1buo_A POZ domain, protein (pr 98.1 1.3E-05 4.5E-10 65.3 9.4 91 5-119 30-121 (121)
14 1r29_A B-cell lymphoma 6 prote 98.0 2.9E-05 9.9E-10 63.5 10.3 92 5-116 31-124 (127)
15 2vpk_A Myoneurin; transcriptio 98.0 4.9E-05 1.7E-09 61.2 10.1 91 5-116 24-115 (116)
16 4eoz_A Speckle-type POZ protei 98.0 7.7E-06 2.6E-10 67.6 5.2 101 5-124 27-128 (145)
17 2q81_A MIZ-1 protein; BTB/POZ 97.9 4.1E-05 1.4E-09 62.3 9.3 89 4-116 28-117 (119)
18 3b84_A Zinc finger and BTB dom 97.9 2.2E-05 7.4E-10 63.9 7.3 89 5-116 26-115 (119)
19 2ppi_A Gigaxonin; BTB domain, 97.9 2.6E-05 9E-10 65.9 8.1 93 5-115 49-143 (144)
20 3ga1_A Nucleus accumbens-assoc 97.9 1.7E-05 5.9E-10 65.3 6.1 91 5-117 35-126 (129)
21 2z8h_A Transcription regulator 97.8 5E-05 1.7E-09 63.3 7.6 96 5-120 38-134 (138)
22 3hve_A Gigaxonin; ubiquitin, c 97.7 6.9E-05 2.4E-09 68.2 7.7 105 5-127 33-139 (256)
23 3hqi_A Speckle-type POZ protei 97.7 0.00019 6.4E-09 67.0 9.9 104 5-127 176-280 (312)
24 3i3n_A Kelch-like protein 11; 97.6 7.3E-05 2.5E-09 69.0 6.8 108 4-128 33-148 (279)
25 3ohu_A Transcription regulator 97.6 2.1E-05 7E-10 64.2 2.5 89 4-113 33-123 (125)
26 3m5b_A Zinc finger and BTB dom 97.6 7.5E-05 2.6E-09 61.5 5.3 85 5-117 32-117 (119)
27 2ihc_A Transcription regulator 97.4 8.6E-05 2.9E-09 60.8 3.3 91 5-115 31-122 (124)
28 3fkc_A Transcriptional regulat 97.3 0.00056 1.9E-08 55.5 7.1 82 5-109 33-115 (116)
29 3drz_A BTB/POZ domain-containi 80.2 4.6 0.00016 32.3 6.8 95 5-117 7-106 (107)
30 3drx_A BTB/POZ domain-containi 37.6 20 0.00067 32.5 3.0 96 5-118 13-113 (202)
31 2guz_B Mitochondrial import in 26.2 82 0.0028 23.2 4.3 50 122-171 1-62 (65)
32 1wgx_A KIAA1903 protein; MYB D 23.5 42 0.0014 25.6 2.2 40 89-132 15-54 (73)
33 2cqq_A RSGI RUH-037, DNAJ homo 21.1 57 0.0019 24.6 2.5 39 89-132 15-53 (72)
34 2k9n_A MYB24; R2R3 domain, DNA 20.6 56 0.0019 25.7 2.5 36 112-147 24-66 (107)
35 3mkl_A HTH-type transcriptiona 20.3 3E+02 0.01 21.2 7.9 79 52-135 4-85 (120)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=3.8e-45 Score=325.05 Aligned_cols=147 Identities=26% Similarity=0.475 Sum_probs=129.8
Q ss_pred CCCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCC---CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCC-----
Q 019017 1 MMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG---SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----- 72 (347)
Q Consensus 1 m~~s~IkL~SsDG~iF~Vd~eaA~qS~tIr~mL~d~g~g---~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~----- 72 (347)
|.+++|+|+|+||++|.|+..+|++|++|++||.+.+.. .+...+|||| +|++.+|++||+||+||+.+++
T Consensus 4 m~~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~~ 82 (169)
T 3v7d_A 4 MVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVP-NVRSSVLQKVIEWAEHHRDSNFPDEDD 82 (169)
T ss_dssp --CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECT-TCCHHHHHHHHHHHHHTTTCCCCC---
T ss_pred CCCCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeC-CCCHHHHHHHHHHHHHcccCCCccccc
Confidence 667899999999999999999999999999999876541 1123789999 8999999999999999998642
Q ss_pred ----CchhhhhhHHhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccccc
Q 019017 73 ----SNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKN 148 (347)
Q Consensus 73 ----s~~ei~~WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEIRk~FgI~~D~TpEEE~Ei~~~ 148 (347)
....+++||++||++++.+||+||.||+||+|++|+++||++||++|+||||+|||++|||++|||||||++++++
T Consensus 83 ~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir~e 162 (169)
T 3v7d_A 83 DDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRE 162 (169)
T ss_dssp -----CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHHTT
T ss_pred ccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 2346899999999999999999999999999999999999999999999999999999999999999999999986
No 2
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=1.3e-42 Score=305.36 Aligned_cols=143 Identities=35% Similarity=0.578 Sum_probs=82.7
Q ss_pred CCCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCC---------
Q 019017 1 MMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG--------- 71 (347)
Q Consensus 1 m~~s~IkL~SsDG~iF~Vd~eaA~qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~--------- 71 (347)
|.+++|+|+|+||+.|.|+..+|++|++|++|+.+.+ ...+|||| +|++.+|++||+||.||+.++
T Consensus 1 ~~~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~ 75 (160)
T 2p1m_A 1 MSAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLP-NVTSKILAKVIEYCKRHVEAAASKAEAVEG 75 (160)
T ss_dssp -------CCC---------CHHHHTCTTTC----------------CCT-TSCHHHHHHHHHC-----------------
T ss_pred CCCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCC-cCcHHHHHHHHHHHHHcccCCCcccccccc
Confidence 4467899999999999999999999999999997653 24689999 899999999999999999653
Q ss_pred --CCchhhhhhHHhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccccc
Q 019017 72 --SSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKN 148 (347)
Q Consensus 72 --~s~~ei~~WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEIRk~FgI~~D~TpEEE~Ei~~~ 148 (347)
.....+++||++|++++..+||+||.||+||+|++|+++||++||++|+||||+|||++|||++|||||||++++++
T Consensus 76 ~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~e 154 (160)
T 2p1m_A 76 AATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRE 154 (160)
T ss_dssp -------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 12356889999999999999999999999999999999999999999999999999999999999999999999885
No 3
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=8.2e-41 Score=288.38 Aligned_cols=131 Identities=35% Similarity=0.572 Sum_probs=110.8
Q ss_pred CccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCC----------
Q 019017 3 KSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS---------- 72 (347)
Q Consensus 3 ~s~IkL~SsDG~iF~Vd~eaA~qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~---------- 72 (347)
|+.|+|+|+||+.|.|++.+|++|++|++|+.+.| ..+|||| +|++.+|++|++||+||+.+++
T Consensus 1 m~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~ 74 (141)
T 1fs1_B 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEK 74 (141)
T ss_dssp -CEEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECT-TCCHHHHHHHHHHHHHHTTCC-----------
T ss_pred CCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecC-CcCHHHHHHHHHHHHHhccCCCcccccccccc
Confidence 46799999999999999999999999999998754 4589999 8999999999999999997531
Q ss_pred CchhhhhhHHhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCCh
Q 019017 73 SNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTE 139 (347)
Q Consensus 73 s~~ei~~WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEIRk~FgI~~D~Tp 139 (347)
....+++||++|++++..+||+|+.||+||+|++|+++||++||++|+||||+|||++|||++||||
T Consensus 75 ~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 75 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp ------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred chhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 2456899999999999999999999999999999999999999999999999999999999999997
No 4
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=1.4e-40 Score=291.17 Aligned_cols=143 Identities=35% Similarity=0.571 Sum_probs=128.2
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCC----------C
Q 019017 5 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------S 73 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~qS~tIr~mL~d~g~g-~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~----------s 73 (347)
.|+|+|+||+.|.|++.+|.+|++|+.|+.+.|+. +....+|||| +|++.+|++||+||.||+.+++ .
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~-~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECT-TSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCC-CccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 48999999999999999999999999999875554 3345789999 8999999999999999996542 2
Q ss_pred chhhhhhHHhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccccc
Q 019017 74 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKN 148 (347)
Q Consensus 74 ~~ei~~WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEIRk~FgI~~D~TpEEE~Ei~~~ 148 (347)
...+++||++|++++..+||+|+.||+||+|++|+++||++||++|+||||+|||++|||++||||||+++++++
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~e 155 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 155 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHHH
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 356889999999999999999999999999999999999999999999999999999999999999999998885
No 5
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.91 E-value=3.4e-25 Score=181.05 Aligned_cols=96 Identities=20% Similarity=0.296 Sum_probs=84.2
Q ss_pred CCCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCC---CCchhh
Q 019017 1 MMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG---SSNKER 77 (347)
Q Consensus 1 m~~s~IkL~SsDG~iF~Vd~eaA~qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~---~s~~ei 77 (347)
|.+.+|+|+|+||++|.|++++|++|++|++||.+ |+ ++...+|||| +|++.+|++||+||+||+.++ .....+
T Consensus 1 m~~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp-~V~~~iL~kVieyc~~h~~~~~~~~~~~~i 77 (99)
T 1hv2_A 1 MSQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELK-QFDSHILEKAVEYLNYNLKYSGVSEDDDEI 77 (99)
T ss_dssp CCCSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEET-TSCHHHHHHHHHHHHHHHHHHHHCSSCSSC
T ss_pred CCCcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecC-CcCHHHHHHHHHHHHHhcccCCCccccccC
Confidence 77889999999999999999999999999999987 54 3345789999 899999999999999999642 223567
Q ss_pred hhhHHhhccCChHHHHHHHhhcccCCC
Q 019017 78 KSFDEKFIRMDTKRLCELTSAADSLQL 104 (347)
Q Consensus 78 ~~WD~eFL~iD~~~LfeLI~AAnYLdI 104 (347)
++| ++++.+||+||.|||||+|
T Consensus 78 ~~w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 78 PEF-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCC-----CCCHHHHHHHHHHHHHHCC
T ss_pred CCc-----cCCHHHHHHHHHHHHHhCc
Confidence 888 7999999999999999997
No 6
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.90 E-value=1e-24 Score=177.21 Aligned_cols=95 Identities=21% Similarity=0.232 Sum_probs=80.4
Q ss_pred ccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHH
Q 019017 4 SYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 82 (347)
Q Consensus 4 s~IkL~SsDG~iF~Vd~eaA~qS~tIr~mL~d~g~-g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 82 (347)
.+|+|+|+||++|.|++++|++|++|++|+.+.|. .+....+|||| +|++.+|++|++||+||+.++.+..++++|
T Consensus 1 ~~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~i~~w-- 77 (96)
T 2fnj_C 1 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF-- 77 (96)
T ss_dssp CEEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHHSCCSCCCCC--
T ss_pred CeEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCC-CCCHHHHHHHHHHHHHccccCCCcccCCCc--
Confidence 37999999999999999999999999999987654 33335789999 899999999999999999654445578888
Q ss_pred hhccCChHHHHHHHhhcccCCC
Q 019017 83 KFIRMDTKRLCELTSAADSLQL 104 (347)
Q Consensus 83 eFL~iD~~~LfeLI~AAnYLdI 104 (347)
++++.+||+|+.|||||+|
T Consensus 78 ---~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 78 ---PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp ---CCCTTTHHHHHHHHHHHTC
T ss_pred ---ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 7
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.89 E-value=2.2e-24 Score=180.35 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=81.3
Q ss_pred CccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhH
Q 019017 3 KSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 81 (347)
Q Consensus 3 ~s~IkL~SsDG~iF~Vd~eaA~qS~tIr~mL~d~g~-g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD 81 (347)
.++|+|+|+||++|.|++++|++|++|++||.+.+. .+....+|||| +|++.+|++||+||+||+.++.+..++++|
T Consensus 16 ~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~i~~w- 93 (112)
T 1vcb_B 16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF- 93 (112)
T ss_dssp -CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHSSCSSCCCCC-
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCC-CCCHHHHHHHHHHHHHhhhccCCcCCCCCc-
Confidence 568999999999999999999999999999987654 22234689999 899999999999999999765555678888
Q ss_pred HhhccCChHHHHHHHhhcccCCC
Q 019017 82 EKFIRMDTKRLCELTSAADSLQL 104 (347)
Q Consensus 82 ~eFL~iD~~~LfeLI~AAnYLdI 104 (347)
++++.+||+||.|||||+|
T Consensus 94 ----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 ----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp ----CCCHHHHHHHHHHHHHHTC
T ss_pred ----ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 8
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.85 E-value=4.9e-22 Score=160.77 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=79.9
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~qS~tIr~mL~d~g~-g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
+|+|+|+||++|.|++.+|.+|++|+.|+.+.|. .+....+|||| +|++.+|++||+||.||+.++.+..++++|
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~-~V~~~iL~kViey~~~h~~~~~~~~~i~~~--- 78 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 78 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECT-TSCHHHHHHHHHHHHHHHHHTTCCSCCCCC---
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECC-CCCHHHHHHHHHHHHHhcccCCCcCCCCcC---
Confidence 8999999999999999999999999999986542 23346789999 899999999999999998765555678899
Q ss_pred hccCChHHHHHHHhhcccCCC
Q 019017 84 FIRMDTKRLCELTSAADSLQL 104 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI 104 (347)
+++++.||+|+.||+||+.
T Consensus 79 --~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 --PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp --CCCGGGHHHHHHHHHHHTC
T ss_pred --cCCHHHHHHHHHHHhhhCC
Confidence 5899999999999999984
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.33 E-value=2.8e-06 Score=67.43 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=76.7
Q ss_pred ccEEEEeCCC---CEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhh
Q 019017 4 SYIWLQTADG---SIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKS 79 (347)
Q Consensus 4 s~IkL~SsDG---~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~ 79 (347)
+-|+|+..+| +.|.+.+.++. .|+.++.|+... ..+.. ..|.|| .+++.+|..+++|+..-...
T Consensus 9 ~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~-~~e~~-~~i~l~-~~~~~~f~~~l~~iYt~~~~--------- 76 (109)
T 2vkp_A 9 ADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD-LAEVK-SEIHIP-DVEPAAFLILLKYMYSDEID--------- 76 (109)
T ss_dssp CCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEET-TSCHHHHHHHHHHHHHCCCC---------
T ss_pred ccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCC-cccCC-CeEEeC-CCCHHHHHHHHHHHcCCCcc---------
Confidence 4588888886 99999999986 799999998643 22223 789999 79999999999999875432
Q ss_pred hHHhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHH
Q 019017 80 FDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 118 (347)
Q Consensus 80 WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~ 118 (347)
++.+.+.+|+.||++|+++.|.++|++.+...
T Consensus 77 -------~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 -------LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp -------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 34467889999999999999999999998754
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.28 E-value=6.7e-07 Score=74.79 Aligned_cols=98 Identities=14% Similarity=0.143 Sum_probs=72.4
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|+. +|+.|.+.+.++. .|++++.|+.... ...|.|| .|++.+|+.|++||.....
T Consensus 27 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~-~~~~~~f~~lL~fiYtg~~-------------- 85 (135)
T 2yy9_A 27 DATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLP-AGFAEIFGLLLDFFYTGHL-------------- 85 (135)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEEC-GGGHHHHHHHHHHHHHSCC--------------
T ss_pred ceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeC-CCCHHHHHHHHHHHhCCCC--------------
Confidence 466765 6899999999865 6999998865321 4569999 7999999999999987542
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPE 125 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpE 125 (347)
.++.+.+.+|+.||++|+|+.|.++|++.+...+.|+++.
T Consensus 86 --~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 86 --ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp --CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred --CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 2344568999999999999999999999999888887654
No 11
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.15 E-value=1.3e-05 Score=68.07 Aligned_cols=104 Identities=20% Similarity=0.227 Sum_probs=81.9
Q ss_pred cEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA-~qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|+. +|+.|.+.+.++ ..|+.++.|+... ..+.....|.|| .+++.+|..+++|+......
T Consensus 36 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~~------------- 99 (172)
T 3htm_A 36 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------- 99 (172)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC-CCGGGTTEEEEC-SSCHHHHHHHHHHHHHSCCT-------------
T ss_pred ceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC-ccccCCCeEEec-CCCHHHHHHHHHHHhCCCCC-------------
Confidence 467766 689999999997 4699999998743 222235689999 79999999999999875532
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 127 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEI 127 (347)
++...+.+|+.||++|+|+.|.+.|+..+...+...+.-++
T Consensus 100 ---~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~ 140 (172)
T 3htm_A 100 ---NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 140 (172)
T ss_dssp ---TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHH
T ss_pred ---CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 23456889999999999999999999999876666555444
No 12
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.13 E-value=1.7e-05 Score=64.11 Aligned_cols=93 Identities=12% Similarity=0.160 Sum_probs=72.9
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHH
Q 019017 4 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 82 (347)
Q Consensus 4 s~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 82 (347)
+-|+|.. +|+.|.+.+.++. .|+.++.|+... ..+.....|.|| .+++.++..+++|+......
T Consensus 26 ~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~ll~~~Yt~~~~------------ 90 (120)
T 2if5_A 26 CDVVILV-EGREFPTHRSVLAACSQYFKKLFTSG-AVVDQQNVYEID-FVSAEALTALMDFAYTATLT------------ 90 (120)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECC-SSCHHHHHHHHHHHHHSCCC------------
T ss_pred CCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCC-ccccCCceEEeC-CCCHHHHHHHHHHHcCCCCc------------
Confidence 3466665 6899999999986 599999987632 223345679999 79999999999999865422
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 019017 83 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 115 (347)
Q Consensus 83 eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~V 115 (347)
++.+.+.+|+.||++|+|++|.++|.+.+
T Consensus 91 ----~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 ----VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp ----CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 34467899999999999999999998865
No 13
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.11 E-value=1.3e-05 Score=65.27 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=75.1
Q ss_pred cEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA-~qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|.. +|+.|.+.+.++ ..|+.++.|+.. ....|.|+ .+++.+|+.+++|+..-...
T Consensus 30 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~------~~~~i~l~-~~~~~~f~~ll~~~Ytg~~~------------- 88 (121)
T 1buo_A 30 DVVIMV-DSQEFHAHRTVLACTSKMFEILFHR------NSQHYTLD-FLSPKTFQQILEYAYTATLQ------------- 88 (121)
T ss_dssp CEEEEE-SSCEEEECHHHHHHHCHHHHHHTTS------CCSEEEEC-SSCHHHHHHHHHHHHHSCCC-------------
T ss_pred CEEEEE-CCEEEehhHHHHhhcCHHHHHHHcC------CCcEEEeC-CCCHHHHHHHHHhhcCCCcC-------------
Confidence 466765 689999999997 579999998753 24578998 79999999999999875432
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 119 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~I 119 (347)
++.+.+.+|+.||++|+|++|.+.|+..+...|
T Consensus 89 ---~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 89 ---AKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp ---CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 234568999999999999999999999987754
No 14
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.05 E-value=2.9e-05 Score=63.51 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=74.2
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccc-CCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHH
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISL-PQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 82 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpL-P~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 82 (347)
-|+|.. +|+.|.+.+.++. .|+.++.|+.... .+ ....|.| + .+++.+|..+++|+..-...
T Consensus 31 Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~-~e-~~~~i~l~~-~~~~~~f~~ll~~~Ytg~~~------------ 94 (127)
T 1r29_A 31 DVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQL-KR-NLSVINLDP-EINPEGFNILLDFMYTSRLN------------ 94 (127)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTT-TT-TCSEEECCT-TSCHHHHHHHHHHHHHSCCC------------
T ss_pred CEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCc-cC-CCCEEEeCC-CCCHHHHHHHHHHHcCCCcC------------
Confidence 466765 5899999999984 6999999986432 22 3567889 7 79999999999999765422
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 019017 83 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 116 (347)
Q Consensus 83 eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA 116 (347)
++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 95 ----~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 ----LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344678999999999999999999998875
No 15
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.97 E-value=4.9e-05 Score=61.18 Aligned_cols=91 Identities=13% Similarity=0.129 Sum_probs=70.7
Q ss_pred cEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA-~qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|+. +|+.|.+.+.++ ..|+.++.|+.... ...-.|++| .+++.+|+.+++|+..-...
T Consensus 24 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~-~~~~~~f~~ll~~~Yt~~~~------------- 85 (116)
T 2vpk_A 24 DCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS---ENNVFLDQS-QVKADGFQKLLEFIYTGTLN------------- 85 (116)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC---CSCEECCTT-TCCHHHHHHHHHHHHHSCCC-------------
T ss_pred cEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC---CCeEEeecC-CCCHHHHHHHHHHHcCCCcc-------------
Confidence 466665 589999999998 56999999986431 122335555 69999999999999865422
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 116 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA 116 (347)
++.+.+.+|+.||++|+|+.|.+.|++.+.
T Consensus 86 ---~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 ---LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp ---CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ---cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 334568999999999999999999998763
No 16
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=97.95 E-value=7.7e-06 Score=67.59 Aligned_cols=101 Identities=19% Similarity=0.208 Sum_probs=72.5
Q ss_pred cEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA-~qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|+. +|+.|.+.+.++ ..|+.++.|+... ..+.....|.|| .+++.+|..+++|+......
T Consensus 27 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~------------- 90 (145)
T 4eoz_A 27 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------- 90 (145)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS-SHHHHHTEEEEC-SSCHHHHHHHHHHHHHSCCT-------------
T ss_pred ceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC-CcCCCCceEEec-CCCHHHHHHHHHhhccCccC-------------
Confidence 467765 689999999998 4699999998632 211123579999 79999999999999876532
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 124 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTp 124 (347)
++...+.+|+.||++|+|+.|.+.|+..+...+...+.
T Consensus 91 ---~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~ 128 (145)
T 4eoz_A 91 ---NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENA 128 (145)
T ss_dssp ---TGGGTHHHHHHHHHHTTCHHHHHHHHCC----------
T ss_pred ---CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHH
Confidence 23356789999999999999999999998876654443
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.95 E-value=4.1e-05 Score=62.27 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=72.7
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHH
Q 019017 4 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 82 (347)
Q Consensus 4 s~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 82 (347)
+-|+|+. +|+.|.+.+.++. .|+.++.|+... ...|.|+ .+++.+|+.+++|+..-..
T Consensus 28 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~-~~~~~~f~~ll~~~Ytg~~------------- 86 (119)
T 2q81_A 28 CDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLD-ISNAAGLGQVLEFMYTAKL------------- 86 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGG-GCCHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHHHcCCCC-------------
Confidence 3466765 6899999999986 699999998742 4568898 7999999999999986542
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 019017 83 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 116 (347)
Q Consensus 83 eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA 116 (347)
.++.+.+.+|+.||++|+|+.|.+.|+..++
T Consensus 87 ---~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 ---SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 2344568999999999999999999998874
No 18
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=97.93 E-value=2.2e-05 Score=63.94 Aligned_cols=89 Identities=15% Similarity=0.134 Sum_probs=71.8
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|.. +|+.|.+.+.++. .|+.++.|+.... ...|.|| ++++.+|+.+++|+..-...
T Consensus 26 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~-~~~~~~f~~ll~~iYtg~~~------------- 85 (119)
T 3b84_A 26 DATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLP-AGFAEIFGLLLDFFYTGHLA------------- 85 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEEC-GGGHHHHHHHHHHHHHSCCC-------------
T ss_pred ceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeC-CCCHHHHHHHHHHHcCCCCc-------------
Confidence 466665 6899999999886 5999999876422 4679999 79999999999999865422
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 116 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA 116 (347)
++.+.+.+|+.||++|+|++|.++|++.+.
T Consensus 86 ---~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 86 ---LTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp ---CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred ---cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 334558899999999999999999998764
No 19
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=97.92 E-value=2.6e-05 Score=65.93 Aligned_cols=93 Identities=25% Similarity=0.310 Sum_probs=72.5
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHH
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 82 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g-~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 82 (347)
-|+|+. +|+.|.+.+.++. .|+.++.|+...... +.....|.|| .|++.+|+.+++|+..-..
T Consensus 49 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~-~v~~~~f~~lL~fiYtg~~------------- 113 (144)
T 2ppi_A 49 DAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQI------------- 113 (144)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC-SSCHHHHHHHHHHHTTSCC-------------
T ss_pred ceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC-CCCHHHHHHHHHHHhCCCC-------------
Confidence 466665 6899999999886 699999998753211 1245679999 7999999999999975332
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 019017 83 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 115 (347)
Q Consensus 83 eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~V 115 (347)
.++.+.+.+|+.||++|+|++|.++|++.+
T Consensus 114 ---~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 ---RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ---CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 234567899999999999999999998754
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.88 E-value=1.7e-05 Score=65.27 Aligned_cols=91 Identities=15% Similarity=0.238 Sum_probs=68.9
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|.. +|+.|.+.+.++. .|+.++.|+... ....|.||..+++.+|..+++|+.....
T Consensus 35 Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~~-------------- 94 (129)
T 3ga1_A 35 DVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGRL-------------- 94 (129)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSEE--------------
T ss_pred ceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCcc--------------
Confidence 466665 7999999999887 699999998754 2567889746999999999999976431
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 117 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~ 117 (347)
.++.+.+.+|+.||++|+|+.|.+.|+..+..
T Consensus 95 --~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 95 --SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp --ECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred --ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 23445689999999999999999999988754
No 21
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.80 E-value=5e-05 Score=63.32 Aligned_cols=96 Identities=8% Similarity=0.161 Sum_probs=75.7
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|+. +|+.|.+.+.++. .|+.++.|+.... . +...|.||..|+...|+.|++|+..-..
T Consensus 38 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-~--e~~~i~l~~~v~~~~~~~lL~~~Ytg~~-------------- 99 (138)
T 2z8h_A 38 DVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQT-D--AELTVTLPEEVTVKGFEPLIQFAYTAKL-------------- 99 (138)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC-C--TTEEEECCTTSCHHHHHHHHHHHHHSCC--------------
T ss_pred CeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCC-C--CCceEEeCCCCCHHHHHHHHHHhcCCCc--------------
Confidence 466765 5899999999985 6999999986432 2 2456888646999999999999987542
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHh
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIE 120 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~Ik 120 (347)
.++.+.+.+|+.||++|+|+.|.+.|++.+...+.
T Consensus 100 --~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 --ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp --CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred --ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 23446689999999999999999999998865443
No 22
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.71 E-value=6.9e-05 Score=68.16 Aligned_cols=105 Identities=24% Similarity=0.283 Sum_probs=77.3
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHH
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 82 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~-g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 82 (347)
-|+|.. +|+.|.+.+.++. .|+.++.|+..... .+.....|.|| +|++.+|..+++|+..-..
T Consensus 33 Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~-~v~~~~f~~ll~~~Yt~~~------------- 97 (256)
T 3hve_A 33 DAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQI------------- 97 (256)
T ss_dssp CEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECS-SCCHHHHHHHHHHHHHSCC-------------
T ss_pred ceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC-CCCHHHHHHHHhhccCCCC-------------
Confidence 466665 6899999999987 59999998763321 12245679999 7999999999999987542
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 019017 83 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 127 (347)
Q Consensus 83 eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEI 127 (347)
.++.+.+.+|+.||++|+|+.|.+.|+..+...+.-.+.-.|
T Consensus 98 ---~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i 139 (256)
T 3hve_A 98 ---RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGI 139 (256)
T ss_dssp ---CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHH
T ss_pred ---cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHH
Confidence 234456899999999999999999999999876655554443
No 23
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.65 E-value=0.00019 Score=67.03 Aligned_cols=104 Identities=20% Similarity=0.227 Sum_probs=79.0
Q ss_pred cEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA-~qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|.. +|+.|.+.+.++ ..|+.++.|+... ..+.....|.|+ .+++.+|+.+++|+.....+
T Consensus 176 Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~~------------- 239 (312)
T 3hqi_A 176 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------- 239 (312)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEEC-SSCHHHHHHHHHHHHHSCCT-------------
T ss_pred ceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccC-ccccCCceEEec-CCCHHHHHHHHHhhcCCCCC-------------
Confidence 466666 789999999998 4699999987632 233345789999 79999999999999875432
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 127 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEI 127 (347)
+....+.+|+.||++|+++.|..+|...+...+.-.++-++
T Consensus 240 ---~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~ 280 (312)
T 3hqi_A 240 ---NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 280 (312)
T ss_dssp ---THHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHH
T ss_pred ---ChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHH
Confidence 12267899999999999999999999998765555554443
No 24
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.63 E-value=7.3e-05 Score=68.96 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=78.4
Q ss_pred ccEEEEeC--CCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCC-----CCCHHHHHHHHHHHHhcCCCCCCch
Q 019017 4 SYIWLQTA--DGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQ-----RVNPAMLSLILDYCRFHQVPGSSNK 75 (347)
Q Consensus 4 s~IkL~Ss--DG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~-----~Vss~iLkkIIEYCe~Hk~~~~s~~ 75 (347)
+-|+|... ||+.|.+.+.++. .|+.++.|+.. +..+.....|.||. .|++.+|..+++|+.....
T Consensus 33 ~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~-~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~------ 105 (279)
T 3i3n_A 33 CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG-QFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRI------ 105 (279)
T ss_dssp CCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSEE------
T ss_pred CCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC-CCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCc------
Confidence 34777776 7999999999987 59999988652 23233345677862 5999999999999976432
Q ss_pred hhhhhHHhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHH
Q 019017 76 ERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 128 (347)
Q Consensus 76 ei~~WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEIR 128 (347)
.++...+.+|+.||++|+|++|.+.|+..+...+.-.+.-.|.
T Consensus 106 ----------~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~ 148 (279)
T 3i3n_A 106 ----------RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIH 148 (279)
T ss_dssp ----------EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHH
T ss_pred ----------ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHH
Confidence 2344568999999999999999999999998877766655553
No 25
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.62 E-value=2.1e-05 Score=64.22 Aligned_cols=89 Identities=15% Similarity=0.220 Sum_probs=70.5
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCC-CCHHHHHHHHHHHHhcCCCCCCchhhhhhH
Q 019017 4 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQR-VNPAMLSLILDYCRFHQVPGSSNKERKSFD 81 (347)
Q Consensus 4 s~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~-Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD 81 (347)
+-|+|+. +|+.|.+.+.++. .|+.++.|+.... . +...|.|| . |++.+|+.+++|+..-.
T Consensus 33 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-~--e~~~i~l~-~~~~~~~f~~~l~~iYtg~------------- 94 (125)
T 3ohu_A 33 CDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQT-K--NDLVVSLP-EEVTARGFGPLLQFAYTAK------------- 94 (125)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCC-C--SSCEEECC-TTCCHHHHHHHHHHHTTSE-------------
T ss_pred cceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCC-C--CCcEEEeC-CCCCHHHHHHHHHhHcCCc-------------
Confidence 3467775 6899999999986 5999999986432 1 25678998 6 99999999999986532
Q ss_pred HhhccCChHHHHHHHhhcccCCCchHHHHHHH
Q 019017 82 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSR 113 (347)
Q Consensus 82 ~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~ 113 (347)
+.++.+.+.+|+.||++|+|+.|.+.|++
T Consensus 95 ---~~~~~~~v~~ll~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 95 ---LLLSRENIREVIRCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp ---EEECTTTHHHHHHHHHHHTBSSCTTSSCC
T ss_pred ---eEECHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 12345678999999999999999998865
No 26
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.57 E-value=7.5e-05 Score=61.46 Aligned_cols=85 Identities=13% Similarity=0.113 Sum_probs=67.4
Q ss_pred cEEEEeCCCCEEEecHHHHHH-cHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVAMF-CPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~q-S~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|.. +|+.|.+.+.++.. |+.++. ....|.|+ .|++.+|+.+++|+..-.
T Consensus 32 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~-~v~~~~f~~ll~fiYtg~--------------- 84 (119)
T 3m5b_A 32 DTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGE-GISPSTFAQLLNFVYGES--------------- 84 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCS-SCCHHHHHHHHHHHTTCC---------------
T ss_pred ceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeC-CCCHHHHHHHHHHHcCCC---------------
Confidence 466665 69999999999865 777652 24568898 799999999999986532
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 117 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~ 117 (347)
+.++.+.+.+|+.||++|+|+.|.+.|++++.+
T Consensus 85 -~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 85 -VELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp -EEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred -cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 134567789999999999999999999998754
No 27
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.38 E-value=8.6e-05 Score=60.77 Aligned_cols=91 Identities=10% Similarity=0.204 Sum_probs=70.7
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|+. +|+.|.+.+.++. .|+.++.|+.... . +...|.+|..|+...++.+++|+..-..
T Consensus 31 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~-~--e~~~i~l~~~v~~~~f~~lL~~iYtg~~-------------- 92 (124)
T 2ihc_A 31 DVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQA-D--GELNITLPEEVTVKGFEPLIQFAYTAKL-------------- 92 (124)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSEE--------------
T ss_pred CEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCC-C--CCceEeecCCcCHHHHHHHHHHhcCCCc--------------
Confidence 466665 5899999999986 6999999986432 1 2356888647999999999999976432
Q ss_pred hccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 115 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~LldL~c~~V 115 (347)
.++.+.+.+|+.||++|+|+.|.+.|++.+
T Consensus 93 --~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 93 --ILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp --EEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred --ccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 234456899999999999999999998754
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.29 E-value=0.00056 Score=55.54 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=65.8
Q ss_pred cEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhhhHHh
Q 019017 5 YIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 83 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~-qS~tIr~mL~d~g~g~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 83 (347)
-|+|.. +|+.|.+.+.++. .|+.++.++... ...|.|| .|++.+++.+++|+..-..+
T Consensus 33 Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~-~~~~~~f~~~l~~~Ytg~~~------------- 91 (116)
T 3fkc_A 33 DVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELS-FIRAEIFAEILNYIYSSKIV------------- 91 (116)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEEC-SSCHHHHHHHHHHHTTSCCC-------------
T ss_pred eEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHhhcCCCcC-------------
Confidence 466665 6899999999984 699999987532 4578998 79999999999998754321
Q ss_pred hccCChHHHHHHHhhcccCCCchHHH
Q 019017 84 FIRMDTKRLCELTSAADSLQLKPLVD 109 (347)
Q Consensus 84 FL~iD~~~LfeLI~AAnYLdI~~Lld 109 (347)
.++.+.+.+|+.||++|+|++|.+
T Consensus 92 --~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 92 --RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp --SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred --CCCHHHHHHHHHHHHHhCccccCc
Confidence 245567899999999999999975
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=80.18 E-value=4.6 Score=32.27 Aligned_cols=95 Identities=12% Similarity=0.230 Sum_probs=63.4
Q ss_pred cEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhc-CCC--CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhh
Q 019017 5 YIWLQTADGSIQQVEQEVAMFCP--LICQEVIQK-GMG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKS 79 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~qS~--tIr~mL~d~-g~g--~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~ 79 (347)
.|+|. -.|+.|.+....+..-+ .+..|+... ... .+....+=+ +-++.++..|+.|++.-+-.-+. .
T Consensus 7 ~v~LN-VGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi--DRdp~~F~~IL~~lr~g~l~~p~--~--- 78 (107)
T 3drz_A 7 WVRLN-VGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK--D--- 78 (107)
T ss_dssp EEEEE-ETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE--CSCHHHHHHHHHHHHHSCCCCCT--T---
T ss_pred EEEEE-ECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe--cCChHHHHHHHHHhCCCeeCCCC--C---
Confidence 34443 35999999999997643 566665421 010 112344555 58999999999999986543221 1
Q ss_pred hHHhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 019017 80 FDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 117 (347)
Q Consensus 80 WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~ 117 (347)
+. ...|...|.|.+|.+|++++-..|..
T Consensus 79 -------~~---~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 79 -------LA---EEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp -------SC---HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -------CC---HHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 11 24577899999999999999877653
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=37.60 E-value=20 Score=32.49 Aligned_cols=96 Identities=11% Similarity=0.219 Sum_probs=63.1
Q ss_pred cEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhc-CCC--CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCchhhhh
Q 019017 5 YIWLQTADGSIQQVEQEVAMFCP--LICQEVIQK-GMG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKS 79 (347)
Q Consensus 5 ~IkL~SsDG~iF~Vd~eaA~qS~--tIr~mL~d~-g~g--~~~~~~IpLP~~Vss~iLkkIIEYCe~Hk~~~~s~~ei~~ 79 (347)
.|+|- -.|..|.+....+..-+ .+..|+... ... .+....+=+ +-++.+|..|+.|++.-.-.-|. .
T Consensus 13 ~V~LN-VGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI--DRDP~~F~~ILnyLRtG~L~lP~--~--- 84 (202)
T 3drx_A 13 WVRLN-VGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK--D--- 84 (202)
T ss_dssp EEEEE-ETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE--CSCSTTHHHHHHHHHHSCCCCCT--T---
T ss_pred EEEEE-ECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe--cCChHHHHHHHHHhcCCccCCCC--C---
Confidence 34443 45999999998887643 455564322 111 112344555 58999999999999986543221 1
Q ss_pred hHHhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHH
Q 019017 80 FDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 118 (347)
Q Consensus 80 WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c~~VA~~ 118 (347)
+. ...|...|.|.+|.+|+++|-..+...
T Consensus 85 -------~~---~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 85 -------LA---EEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp -------SC---HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -------CC---HHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 11 135788999999999999999888653
No 31
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=26.25 E-value=82 Score=23.21 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=31.1
Q ss_pred CCHHHHHhHcCCCCC---CChHhhhccccc--CCCchh-------HHHHHHHHHHHHHHHHH
Q 019017 122 KTPEEIREIFHLPDD---LTEEEKLEPLKN--TTDDPR-------IRLLNRLYAKKRKELKE 171 (347)
Q Consensus 122 KTpEEIRk~FgI~~D---~TpEEE~Ei~~~--~~~dp~-------~~~ln~~~ak~~~el~~ 171 (347)
.|.+|-++++||..+ .|.++-.+.-+. ..+.|+ ...+|+.+.+..++++.
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~~~~ 62 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWELAQ 62 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 367888999999877 677665554433 235776 44567655544444443
No 32
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=23.50 E-value=42 Score=25.64 Aligned_cols=40 Identities=13% Similarity=0.113 Sum_probs=27.3
Q ss_pred hHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcC
Q 019017 89 TKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFH 132 (347)
Q Consensus 89 ~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEIRk~Fg 132 (347)
...+|+-.+|..-.+-+.-. ..||..+-|||++|++..|.
T Consensus 15 E~k~fe~ALa~~~~~tp~rW----e~IA~~V~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 15 ELQKLHCAFASLPKHKPGFW----SEVAAAVGSRSPEECQRKYM 54 (73)
T ss_dssp HHHHHHHHHHHSCSSSSSHH----HHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccHH----HHHHHHcCCCCHHHHHHHHH
Confidence 45566666665555544433 56888889999999987554
No 33
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=21.11 E-value=57 Score=24.56 Aligned_cols=39 Identities=5% Similarity=-0.082 Sum_probs=23.2
Q ss_pred hHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcC
Q 019017 89 TKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFH 132 (347)
Q Consensus 89 ~~~LfeLI~AAnYLdI~~LldL~c~~VA~~IkGKTpEEIRk~Fg 132 (347)
...+|+-+.|..--+-+.= -..||..+ |+|++|++..|.
T Consensus 15 E~k~fe~al~~~p~~t~~R----W~~IA~~l-gRt~~eV~~~y~ 53 (72)
T 2cqq_A 15 DLSQLTRSMVKFPGGTPGR----WEKIAHEL-GRSVTDVTTKAK 53 (72)
T ss_dssp HHHHHHHHHHHSCTTCTTH----HHHHHHHH-TSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcH----HHHHHHHh-CCCHHHHHHHHH
Confidence 3445555555433333332 34567766 999999998764
No 34
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=20.57 E-value=56 Score=25.68 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=26.8
Q ss_pred HHHHHHHHhCCCHHHHHhHcC------C-CCCCChHhhhcccc
Q 019017 112 SRALARIIEGKTPEEIREIFH------L-PDDLTEEEKLEPLK 147 (347)
Q Consensus 112 c~~VA~~IkGKTpEEIRk~Fg------I-~~D~TpEEE~Ei~~ 147 (347)
-..||..+.|.|+.++|+.+. | ...+|+||...++.
T Consensus 24 W~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~ 66 (107)
T 2k9n_A 24 WIRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQ 66 (107)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHH
T ss_pred HHHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHH
Confidence 456888889999999999653 2 24799998875443
No 35
>3mkl_A HTH-type transcriptional regulator GADX; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.15A {Escherichia coli}
Probab=20.26 E-value=3e+02 Score=21.15 Aligned_cols=79 Identities=9% Similarity=0.021 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCchhhhhhHHhhccCChHHHHHHHhhcccCCCchHHHHHH-HHHHHHHh--CCCHHHHH
Q 019017 52 VNPAMLSLILDYCRFHQVPGSSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTS-RALARIIE--GKTPEEIR 128 (347)
Q Consensus 52 Vss~iLkkIIEYCe~Hk~~~~s~~ei~~WD~eFL~iD~~~LfeLI~AAnYLdI~~LldL~c-~~VA~~Ik--GKTpEEIR 128 (347)
+....+.+|++|+..|...+. .+.++ .+.+.+....|..++... -+-+..++...- .....++. +.++.||-
T Consensus 4 ~~~~~~~~~~~~i~~~~~~~~---~~~~l-A~~~~~S~~~l~r~fk~~-G~s~~~~~~~~Rl~~A~~lL~~~~~si~eIA 78 (120)
T 3mkl_A 4 LQPNMRTRVCTVINNNIAHEW---TLARI-ASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVA 78 (120)
T ss_dssp -CCCHHHHHHHHHHTSTTSCC---CHHHH-HHHTTCCHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTSTTCCHHHHH
T ss_pred ccHHHHHHHHHHHHHhccCCC---CHHHH-HHHHCcCHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 556788999999998875533 23333 334567778888887663 333333333322 22333443 67888888
Q ss_pred hHcCCCC
Q 019017 129 EIFHLPD 135 (347)
Q Consensus 129 k~FgI~~ 135 (347)
..+|..+
T Consensus 79 ~~~Gf~~ 85 (120)
T 3mkl_A 79 VSCGYHS 85 (120)
T ss_dssp HHTTCSC
T ss_pred HHHCCCC
Confidence 8888664
Done!