Query 019025
Match_columns 347
No_of_seqs 191 out of 1178
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 09:43:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.1 3.2E-09 1.1E-13 103.7 19.7 235 51-299 11-254 (445)
2 3gia_A Uncharacterized protein 98.9 2.6E-08 9E-13 97.2 18.1 234 51-298 9-250 (444)
3 4djk_A Probable glutamate/gamm 98.2 0.00011 3.9E-09 72.5 20.3 61 239-299 203-264 (511)
4 2jln_A MHP1; hydantoin, transp 96.9 0.02 6.7E-07 56.9 15.1 78 126-205 90-172 (501)
5 3dh4_A Sodium/glucose cotransp 80.1 47 0.0016 32.5 19.1 139 53-206 25-165 (530)
6 2xq2_A Sodium/glucose cotransp 28.5 4.3E+02 0.015 25.9 17.0 80 125-205 113-193 (593)
7 2wsw_A BCCT family betaine/car 10.5 1.1E+03 0.037 22.9 11.3 27 126-153 181-208 (509)
8 2lk9_A Bone marrow stromal ant 8.3 3.6E+02 0.012 16.0 2.9 9 63-71 6-14 (35)
9 3tdu_A DCN1-like protein 1; E2 6.4 2.1E+02 0.0072 24.2 1.8 26 255-280 81-106 (200)
10 3kev_A Galieria sulfuraria DCU 5.9 2.3E+02 0.008 23.9 1.8 25 255-279 83-107 (199)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.12 E-value=3.2e-09 Score=103.73 Aligned_cols=235 Identities=9% Similarity=0.001 Sum_probs=131.3
Q ss_pred chHHHHHHHhhhhhhhhhchHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhcHHHHh
Q 019025 51 SAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVL 130 (347)
Q Consensus 51 S~~~a~~nl~~~~iG~GiLsLP~af~~~G~v~Giilli~~a~l~~yt~~lL~~~~~~~~~~~~~~~~~~~~~~~~y~ev~ 130 (347)
+.++...-.+.+++|+|++.+|...++.|.. +++..++.+++....+. +|.|...+.|+.+-. .+..
T Consensus 11 ~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~----~~~el~~~~p~~Gg~--------y~~~ 77 (445)
T 3l1l_A 11 GLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSM----VYAKMSFLDPSPGGS--------YAYA 77 (445)
T ss_dssp CHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHH----HHHHHHHHCCCTTTH--------HHHH
T ss_pred cHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHH----HHHHHHccCCCCCCc--------hhhH
Confidence 5677778888999999999999999999964 66666666666655544 345666666654322 3566
Q ss_pred HhhhcccchhhhhhhHHHH-HHHHHHHHHHhhcccccccccccccchhhHhHHHHHH---HhhccCCCCchhHHHHHHHH
Q 019025 131 DGLLGPYWKAVGLAFNCTF-LLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCA---TTVFIPSFHNYRIWSFLGLG 206 (347)
Q Consensus 131 ~~~~G~~~~~~~~~~~i~~-~~~g~v~~li~~~~~l~~~~~~~~~~~~~~i~~~~~~---pl~~i~sl~~l~~~S~~g~~ 206 (347)
++.+||+++.. ......+ ...+...+....++.+....+..+......+.+++++ -..-.+..+....++.+...
T Consensus 78 ~~~~G~~~g~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~ 156 (445)
T 3l1l_A 78 RRCFGPFLGYQ-TNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATV 156 (445)
T ss_dssp HHHSCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HhHcCChHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCccccccHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 88899987764 3322221 1112222333233333222121222211112222111 11112333443333332222
Q ss_pred HHHHHHHHHHHhhhhcccCCCC----CCCCchhHHHHHhhhhhHHHhcccccchHhHHHhcCCCcc-chhHHHHHHHHHH
Q 019025 207 MTTYTAWYLTIAAVVHGQVEGA----SHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQK-FKYIYLFATLYVF 281 (347)
Q Consensus 207 ~~~~~~~~i~v~~~~~g~~~~v----~~~~p~~~~~~f~a~g~i~faF~gh~~~~~I~~~M~~P~~-f~~v~~~s~~~~~ 281 (347)
..+...+.+.+..+.+.++++. ...+..++..++.++....|+|.|........+|+|||+| .+|.+..+...+.
T Consensus 157 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~ 236 (445)
T 3l1l_A 157 LALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAA 236 (445)
T ss_dssp HHHHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHH
Confidence 1111111122222222222111 1111123557788899999999999999999999999965 8999999999999
Q ss_pred HHHhhhhhhhhhhcCccc
Q 019025 282 TLTIPSATAVYWSFGDQL 299 (347)
Q Consensus 282 ~ly~~~g~~gY~afG~~~ 299 (347)
++|+...+......+.+.
T Consensus 237 ~~y~~~~~~~~~~~~~~~ 254 (445)
T 3l1l_A 237 VCYVLSTTAIMGMIPNAA 254 (445)
T ss_dssp HHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHhcCCHHH
Confidence 999999888777776543
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=98.95 E-value=2.6e-08 Score=97.23 Aligned_cols=234 Identities=10% Similarity=0.040 Sum_probs=128.4
Q ss_pred chHHHHHHHhhhhhhhhhchHH-HHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhcHHHH
Q 019025 51 SAWDAWFSCASNQVAQVLLTLP-YSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEV 129 (347)
Q Consensus 51 S~~~a~~nl~~~~iG~GiLsLP-~af~~~G~v~Giilli~~a~l~~yt~~lL~~~~~~~~~~~~~~~~~~~~~~~~y~ev 129 (347)
+.++...-.+.+++|+|++.+| .+.++.|- ...+..++.+++...++..+ .|...+.|+.+-. .+.
T Consensus 9 ~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~----~el~~~~P~~Gg~--------y~~ 75 (444)
T 3gia_A 9 SLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSY----TKLGAKIVSNAGP--------IAF 75 (444)
T ss_dssp CHHHHHHHHHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHH----HHHHTTCCCTTTH--------HHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH----HHHHhhCCCCCcH--------HHh
Confidence 5567777788899999999876 45566675 45566666666655554443 5666666654322 356
Q ss_pred hHhhhcccc-hhhhhhhHHHH-HHHHHHHHHHhhcccccccccccccchhhHhHHHHHH---HhhccCCCCchhHHHHHH
Q 019025 130 LDGLLGPYW-KAVGLAFNCTF-LLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCA---TTVFIPSFHNYRIWSFLG 204 (347)
Q Consensus 130 ~~~~~G~~~-~~~~~~~~i~~-~~~g~v~~li~~~~~l~~~~~~~~~~~~~~i~~~~~~---pl~~i~sl~~l~~~S~~g 204 (347)
.++.+||++ ... ......+ .......+....++.+....+..+...|..+.+.++. -..-.+..+.......+.
T Consensus 76 ~~~~~G~~~~~g~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~ 154 (444)
T 3gia_A 76 IHKAIGDNIITGA-LSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFI 154 (444)
T ss_dssp HHHHHCSSHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHhCcchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 778899863 111 1111111 1111112222222222221111122233222222111 111223334433333332
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCC-CCchhHHHHHhhhhhHHHhcccccchHhHHHhcCCCcc-chhHHHHHHHHHHH
Q 019025 205 LGMTTYTAWYLTIAAVVHGQVEGASH-TAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQK-FKYIYLFATLYVFT 282 (347)
Q Consensus 205 ~~~~~~~~~~i~v~~~~~g~~~~v~~-~~p~~~~~~f~a~g~i~faF~gh~~~~~I~~~M~~P~~-f~~v~~~s~~~~~~ 282 (347)
....+...+.+.+..+...++++... ..|.++..++.++....|+|.|........+|+|||+| .+|.+..+...+.+
T Consensus 155 ~~~~i~~~~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~ 234 (444)
T 3gia_A 155 VLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMF 234 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHCCGGGTSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcChhhcCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHHH
Confidence 22111111112223333322222222 23445667888899999999999999999999999977 89999999999999
Q ss_pred HHhhhhhhhhhhcCcc
Q 019025 283 LTIPSATAVYWSFGDQ 298 (347)
Q Consensus 283 ly~~~g~~gY~afG~~ 298 (347)
+|+...+......+.+
T Consensus 235 ~y~~~~~~~~~~~~~~ 250 (444)
T 3gia_A 235 VYVGVAISAIGNLPID 250 (444)
T ss_dssp HHHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHhCCCHH
Confidence 9998887766555543
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=98.20 E-value=0.00011 Score=72.55 Aligned_cols=61 Identities=8% Similarity=0.143 Sum_probs=53.5
Q ss_pred HHhhhhhHHHhcccccchHhHHHhcCCCcc-chhHHHHHHHHHHHHHhhhhhhhhhhcCccc
Q 019025 239 YFTGATNILYTFGGHAVTVEIMHAMWKPQK-FKYIYLFATLYVFTLTIPSATAVYWSFGDQL 299 (347)
Q Consensus 239 ~f~a~g~i~faF~gh~~~~~I~~~M~~P~~-f~~v~~~s~~~~~~ly~~~g~~gY~afG~~~ 299 (347)
.+.++...+|+|.|........+|+|||+| .+|.+..+...+.++|++..+......+++.
T Consensus 203 ~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~~~~~~~~~~y~~~~~~~~~~~~~~~ 264 (511)
T 4djk_A 203 TLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNE 264 (511)
T ss_dssp TTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHeecCHhh
Confidence 445678889999999999999999999986 8999999999999999999888777777654
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=96.86 E-value=0.02 Score=56.89 Aligned_cols=78 Identities=17% Similarity=0.051 Sum_probs=43.6
Q ss_pred HHHHhHhhhcccchhhhhhhHHHHHHHH-HHHHHHhhccccccccc---ccc-cchhhHhHHHHHHHhhccCCCCchhHH
Q 019025 126 WFEVLDGLLGPYWKAVGLAFNCTFLLFG-SVIQLIACASNIYYIND---RLD-KRTWTYIFGACCATTVFIPSFHNYRIW 200 (347)
Q Consensus 126 y~ev~~~~~G~~~~~~~~~~~i~~~~~g-~v~~li~~~~~l~~~~~---~~~-~~~~~~i~~~~~~pl~~i~sl~~l~~~ 200 (347)
+.++.|..||+++.++. .+...+.+.| ..++....++.+..... ..+ ...+.++++++.+++.+.. ++.++++
T Consensus 90 ~~v~~R~~FG~~Gs~i~-~ll~~i~~igw~~v~~~~gg~al~~~~~~~~g~~~~~v~~~i~~~l~~~~~~~G-~~~i~~~ 167 (501)
T 2jln_A 90 FTVAARMPFGIRGSLIP-ITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTTFYG-ITFIRWM 167 (501)
T ss_dssp HHHHTTTTSCTTTTHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHTTH-HHHHHHH
T ss_pred hhhhhHhhcchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhC-HHHHHHH
Confidence 57899999999988763 3333333444 34454444444332211 122 2345666777777777543 5666655
Q ss_pred HHHHH
Q 019025 201 SFLGL 205 (347)
Q Consensus 201 S~~g~ 205 (347)
..+..
T Consensus 168 ~~~~~ 172 (501)
T 2jln_A 168 NVFAS 172 (501)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=80.08 E-value=47 Score=32.54 Aligned_cols=139 Identities=9% Similarity=-0.027 Sum_probs=58.9
Q ss_pred HHHHHHHhhhhh-hhhhchHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhcHHHHhH
Q 019025 53 WDAWFSCASNQV-AQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLD 131 (347)
Q Consensus 53 ~~a~~nl~~~~i-G~GiLsLP~af~~~G~v~Giilli~~a~l~~yt~~lL~~~~~~~~~~~~~~~~~~~~~~~~y~ev~~ 131 (347)
+-..+.+..+.+ +.-++++|-...+.|+........ .++.....+..+.. .++ |.+ +.|..|..+
T Consensus 25 ~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~-~~~~~~i~~~~~~p---~~~-~~~---------~~T~~e~l~ 90 (530)
T 3dh4_A 25 WAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLP---IFI-EKG---------IYTIPEFVE 90 (530)
T ss_dssp HHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHH-HHHHHHHHHHHTHH---HHH-HTT---------CCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH-HHHHHHHHHHHHHH---HHH-HcC---------CccHHHHHH
Confidence 444455555555 455788999888888753221111 11111111222211 111 111 225789999
Q ss_pred hhhcccchhhhhhhHHHHHHHH-HHHHHHhhcccccccccccccchhhHhHHHHHHHhhccCCCCchhHHHHHHHH
Q 019025 132 GLLGPYWKAVGLAFNCTFLLFG-SVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLG 206 (347)
Q Consensus 132 ~~~G~~~~~~~~~~~i~~~~~g-~v~~li~~~~~l~~~~~~~~~~~~~~i~~~~~~pl~~i~sl~~l~~~S~~g~~ 206 (347)
.-||++.+.+...+.+....+. ...++...+..++..- .++...-+++.++++..-+..--++...+.-.+-.+
T Consensus 91 ~Rfg~~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~-Gi~~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~iQ~~ 165 (530)
T 3dh4_A 91 KRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETIL-GIPLMYSILGLALFALVYSIYGGLSAVVWTDVIQVF 165 (530)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHTTC------CCSHHHHHHH
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 9999987654221111111111 1112221121121111 123333344555556666666667777776655443
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=28.53 E-value=4.3e+02 Score=25.92 Aligned_cols=80 Identities=8% Similarity=-0.063 Sum_probs=35.6
Q ss_pred cHHHHhHhhhcccchhhhhhhHHHHHHHH-HHHHHHhhcccccccccccccchhhHhHHHHHHHhhccCCCCchhHHHHH
Q 019025 125 QWFEVLDGLLGPYWKAVGLAFNCTFLLFG-SVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFL 203 (347)
Q Consensus 125 ~y~ev~~~~~G~~~~~~~~~~~i~~~~~g-~v~~li~~~~~l~~~~~~~~~~~~~~i~~~~~~pl~~i~sl~~l~~~S~~ 203 (347)
|..|..+.-||++.+.+...+.+....+. ...++...+..++.+. .++...-+++.++++...+..--++...+.-.+
T Consensus 113 T~~e~l~~Rfg~~~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~-Gi~~~~~i~i~~~i~~~Yt~~GGl~av~~TD~i 191 (593)
T 2xq2_A 113 TIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETIL-GIPLMYSILGLALFALVYSIYGGLSAVVWTDVI 191 (593)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHTTC---CCHHHHH
T ss_pred CcHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 57899888999876654221111111111 1122222222222111 122222344455566666677777777666554
Q ss_pred HH
Q 019025 204 GL 205 (347)
Q Consensus 204 g~ 205 (347)
-.
T Consensus 192 Q~ 193 (593)
T 2xq2_A 192 QV 193 (593)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 7
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=10.53 E-value=1.1e+03 Score=22.86 Aligned_cols=27 Identities=19% Similarity=0.045 Sum_probs=14.3
Q ss_pred HHHHh-HhhhcccchhhhhhhHHHHHHHH
Q 019025 126 WFEVL-DGLLGPYWKAVGLAFNCTFLLFG 153 (347)
Q Consensus 126 y~ev~-~~~~G~~~~~~~~~~~i~~~~~g 153 (347)
|+-++ ++.-|+.++.+ =.+++..+++|
T Consensus 181 ~PllG~~r~~G~~G~~I-Dilav~at~~G 208 (509)
T 2wsw_A 181 VPLVGEKHVNGLFGTVV-DNFYLVALILA 208 (509)
T ss_dssp HHHHHHHHHHSHHHHHH-HHHHHHHHHHH
T ss_pred HhhcCCcccCCchhhhh-HHHHHHHHHHH
Confidence 55667 67767655543 22333345666
No 8
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=8.29 E-value=3.6e+02 Score=15.95 Aligned_cols=9 Identities=22% Similarity=0.235 Sum_probs=4.1
Q ss_pred hhhhhhchH
Q 019025 63 QVAQVLLTL 71 (347)
Q Consensus 63 ~iG~GiLsL 71 (347)
.+|.|++.|
T Consensus 6 ~lg~Gvl~L 14 (35)
T 2lk9_A 6 LLGIGILVL 14 (35)
T ss_dssp HHHHHHHHH
T ss_pred eecccHHHH
Confidence 344554443
No 9
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=6.45 E-value=2.1e+02 Score=24.23 Aligned_cols=26 Identities=19% Similarity=0.399 Sum_probs=19.9
Q ss_pred chHhHHHhcCCCccchhHHHHHHHHH
Q 019025 255 VTVEIMHAMWKPQKFKYIYLFATLYV 280 (347)
Q Consensus 255 ~~~~I~~~M~~P~~f~~v~~~s~~~~ 280 (347)
.++.+.+++++|.+|+.++..++-++
T Consensus 81 ~l~~l~~~l~d~~~Fk~~Y~ftF~~~ 106 (200)
T 3tdu_A 81 QIPKMEQELKEPGRFKDFYQFTFNFA 106 (200)
T ss_dssp THHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 36778888888888888887776543
No 10
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=5.94 E-value=2.3e+02 Score=23.92 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=18.7
Q ss_pred chHhHHHhcCCCccchhHHHHHHHH
Q 019025 255 VTVEIMHAMWKPQKFKYIYLFATLY 279 (347)
Q Consensus 255 ~~~~I~~~M~~P~~f~~v~~~s~~~ 279 (347)
-++.+.+++++|.+|+.++..++-+
T Consensus 83 ~l~~l~~~l~d~~~Fk~~Y~ftF~~ 107 (199)
T 3kev_A 83 KLSSLRKEIEDPSKFRAFYQFVFQY 107 (199)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3577788888888888888776654
Done!