BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019026
MLKPFCNVTDQAQCRFLGLPSPVPRFRRRYAVVPCSRPMNKPTAPVQVQAIVSDQGSPAR
LESGPCSLADRLRLGTLTEDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQS
VGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWIL
KDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENSSSSRKI
SKLEDPAQYSRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMATKLFLAFLFLPNRNC
YISTTLKFFLSNSCLCMTEHASRCHRHPRTPDYHLRLQTRMPTGRCS

High Scoring Gene Products

Symbol, full name Information P value
FaTA
AT3G25110
protein from Arabidopsis thaliana 1.9e-108
AT4G13050 protein from Arabidopsis thaliana 4.2e-102
FATB
AT1G08510
protein from Arabidopsis thaliana 3.6e-50
CHY_0816
Acyl carrier protein thioesterase, homolog
protein from Carboxydothermus hydrogenoformans Z-2901 1.2e-06
CHY_0816
acyl carrier protein thioesterase, homolog
protein from Carboxydothermus hydrogenoformans Z-2901 1.2e-06

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019026
        (347 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2090285 - symbol:FaTA "AT3G25110" species:3702...  1072  1.9e-108  1
TAIR|locus:2123256 - symbol:AT4G13050 "AT4G13050" species...  1012  4.2e-102  1
TAIR|locus:2201786 - symbol:FATB "AT1G08510" species:3702...   522  3.6e-50   1
UNIPROTKB|Q3ADW4 - symbol:CHY_0816 "Acyl carrier protein ...   135  1.2e-06   1
TIGR_CMR|CHY_0816 - symbol:CHY_0816 "acyl carrier protein...   135  1.2e-06   1


>TAIR|locus:2090285 [details] [associations]
            symbol:FaTA "AT3G25110" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=IGI;ISS]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] [GO:0016297
            "acyl-[acyl-carrier-protein] hydrolase activity" evidence=IDA]
            InterPro:IPR002864 Pfam:PF01643 GO:GO:0009507 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006633 EMBL:AB026647 GO:GO:0016295
            GO:GO:0004320 GO:GO:0016296 EMBL:Z36912 EMBL:AK176105
            IPI:IPI00530028 PIR:S69197 RefSeq:NP_189147.1 UniGene:At.19907
            ProteinModelPortal:Q42561 SMR:Q42561 STRING:Q42561 PaxDb:Q42561
            PRIDE:Q42561 EnsemblPlants:AT3G25110.1 GeneID:822102
            KEGG:ath:AT3G25110 TAIR:At3g25110 eggNOG:COG3884
            HOGENOM:HOG000237896 InParanoid:Q42561 KO:K10782 OMA:DTRRLQK
            PhylomeDB:Q42561 ProtClustDB:CLSN2684548
            BioCyc:MetaCyc:AT3G25110-MONOMER Genevestigator:Q42561
            GO:GO:0016297 Uniprot:Q42561
        Length = 362

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 220/285 (77%), Positives = 236/285 (82%)

Query:     1 MLKPFCNVTDQAQCRFLGLPS------PVPRFRRRYAVVPCSRPMNKPTAPVQVQAIVS- 53
             MLK  CNVTD    R L   S      PV   RRR  +V CS+   K T  V ++A+VS 
Sbjct:     1 MLKLSCNVTDSKLQRSLLFFSHSYRSDPVNFIRRR--IVSCSQ--TKKTGLVPLRAVVSA 56

Query:    54 DQGSPARLESGPCSLADRLRLGTLTEDGLSYKEKFIVRCYEVGINKTATVETIANLLQEV 113
             DQGS  +   G  +LAD+LRLG+LTEDGLSYKEKF+VR YEVG NKTATVETIANLLQEV
Sbjct:    57 DQGSVVQ---GLATLADQLRLGSLTEDGLSYKEKFVVRSYEVGSNKTATVETIANLLQEV 113

Query:   114 GCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIG 173
             GCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAW DVVEIETWCQSEGRIG
Sbjct:   114 GCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWGDVVEIETWCQSEGRIG 173

Query:   174 TRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEEN 233
             TRRDWILKD  TGEV GRATSKWVMMNQDTRRLQKVSDDVR+EYLVFCP+E RLAFPEEN
Sbjct:   174 TRRDWILKDSVTGEVTGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPQEPRLAFPEEN 233

Query:   234 SSSSRKISKLEDPAQYSRLGLIPRRADLDMNQHVNNVTYIGWLLE 278
             + S +KI KLEDPAQYS +GL PRRADLDMNQHVNNVTYIGW+LE
Sbjct:   234 NRSLKKIPKLEDPAQYSMIGLKPRRADLDMNQHVNNVTYIGWVLE 278


>TAIR|locus:2123256 [details] [associations]
            symbol:AT4G13050 "AT4G13050" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=IGI;ISS]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] InterPro:IPR002864 Pfam:PF01643
            GO:GO:0009507 EMBL:CP002687 GO:GO:0006633 EMBL:AL161535
            EMBL:AL079349 GO:GO:0016295 GO:GO:0004320 GO:GO:0016296
            HOGENOM:HOG000237896 KO:K10782 ProtClustDB:CLSN2684548
            EMBL:BT024746 EMBL:AK118624 IPI:IPI00527422 PIR:T10207
            RefSeq:NP_193041.1 UniGene:At.33422 ProteinModelPortal:Q9SV64
            SMR:Q9SV64 STRING:Q9SV64 PRIDE:Q9SV64 EnsemblPlants:AT4G13050.1
            GeneID:826919 KEGG:ath:AT4G13050 TAIR:At4g13050 InParanoid:Q9SV64
            OMA:LRCHTPP PhylomeDB:Q9SV64 Genevestigator:Q9SV64 Uniprot:Q9SV64
        Length = 367

 Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
 Identities = 208/283 (73%), Positives = 225/283 (79%)

Query:     1 MLKPFCNVTDQAQCRFLGLPSPVPRFRRRYAVVPCSRPMNKPTAPVQVQAIVS-DQG-SP 58
             MLK  CNVTD     F           R+   + C +   +P     ++AI+S D G S 
Sbjct:     1 MLKLSCNVTDHIHNLFSNSRRIFVPVHRQTRPISCFQLKKEP-----LRAILSADHGNSS 55

Query:    59 ARLE---SGPCSLADRLRLGTLTEDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGC 115
              R+    SG  S ADRLR G L EDG SYKEKFIVR YEVGINKTAT+ETIANLLQEV C
Sbjct:    56 VRVADTVSGT-SPADRLRFGRLMEDGFSYKEKFIVRSYEVGINKTATIETIANLLQEVAC 114

Query:   116 NHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTR 175
             NH Q+VGFSTDGFATT TMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTR
Sbjct:   115 NHVQNVGFSTDGFATTLTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTR 174

Query:   176 RDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENSS 235
             RDWILKD ATGEVIGRATSKWVMMNQDTRRLQ+V+D+VR+EYLVFCP E RLAFPEEN+S
Sbjct:   175 RDWILKDCATGEVIGRATSKWVMMNQDTRRLQRVTDEVRDEYLVFCPPEPRLAFPEENNS 234

Query:   236 SSRKISKLEDPAQYSRLGLIPRRADLDMNQHVNNVTYIGWLLE 278
             S +KI KLEDPAQYS LGL PRRADLDMNQHVNNVTYIGW+LE
Sbjct:   235 SLKKIPKLEDPAQYSMLGLKPRRADLDMNQHVNNVTYIGWVLE 277


>TAIR|locus:2201786 [details] [associations]
            symbol:FATB "AT1G08510" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process"
            evidence=ISS;IDA] [GO:0006633 "fatty acid biosynthetic process"
            evidence=ISS;IMP] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] [GO:0016297
            "acyl-[acyl-carrier-protein] hydrolase activity" evidence=IDA]
            [GO:0009536 "plastid" evidence=TAS] InterPro:IPR002864
            InterPro:IPR021113 Pfam:PF01643 Pfam:PF12590 EMBL:CP002684
            GO:GO:0009507 GO:GO:0009536 GO:GO:0000036 EMBL:AC006932
            UniGene:At.19907 GO:GO:0016297 EMBL:Z36910 EMBL:Z36911
            EMBL:AY054679 EMBL:AY059827 EMBL:AY064652 EMBL:BT008505
            IPI:IPI00516603 PIR:S69195 RefSeq:NP_172327.1 UniGene:At.46797
            ProteinModelPortal:Q9SJE2 STRING:Q9SJE2 PRIDE:Q9SJE2
            EnsemblPlants:AT1G08510.1 GeneID:837372 KEGG:ath:AT1G08510
            TAIR:At1g08510 InParanoid:Q9SJE2 KO:K10781 OMA:ECQHLLR
            PhylomeDB:Q9SJE2 ProtClustDB:PLN02370
            BioCyc:MetaCyc:AT1G08510-MONOMER Genevestigator:Q9SJE2
            Uniprot:Q9SJE2
        Length = 412

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 105/236 (44%), Positives = 151/236 (63%)

Query:    68 LADRLRLGTLTEDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDG 127
             L D   +G + +DGL +++ F +R YE+G +++A++ET+ N LQE   NH ++ G   DG
Sbjct:   123 LVDPFGIGRIVQDGLVFRQNFSIRSYEIGADRSASIETVMNHLQETALNHVKTAGLLGDG 182

Query:   128 FATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGE 187
             F +T  M K +LIWV  RM + + KYP W DVVE++TW    G+ G RRDW+++D  TGE
Sbjct:   183 FGSTPEMFKKNLIWVVTRMQVVVDKYPTWGDVVEVDTWVSQSGKNGMRRDWLVRDCNTGE 242

Query:   188 VIGRATSKWVMMNQDTRRLQKVSDDVREEYL-VFCPRELRLAFPEENSSSSRKISKLEDP 246
              + RA+S WVMMN+ TRRL K+ ++VR E    F   +  LA  E+    SRK++K++D 
Sbjct:   243 TLTRASSVWVMMNKLTRRLSKIPEEVRGEIEPYFVNSDPVLA--ED----SRKLTKIDDK 296

Query:   247 -AQYSRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMATKLFLAFLFLP-NRNC 300
              A Y R GL PR +DLD+NQHVNNV YIGW+LE + + +  +  L  + L   R C
Sbjct:   297 TADYVRSGLTPRWSDLDVNQHVNNVKYIGWILESAPVGIMERQKLKSMTLEYRREC 352


>UNIPROTKB|Q3ADW4 [details] [associations]
            symbol:CHY_0816 "Acyl carrier protein thioesterase,
            homolog" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0000036 "ACP phosphopantetheine attachment site binding
            involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
            InterPro:IPR002864 Pfam:PF01643 EMBL:CP000141
            GenomeReviews:CP000141_GR GO:GO:0016790 GO:GO:0000036
            eggNOG:COG3884 RefSeq:YP_359670.1 STRING:Q3ADW4 GeneID:3726821
            KEGG:chy:CHY_0816 PATRIC:21274768 HOGENOM:HOG000054733 OMA:YNRFFEY
            BioCyc:CHYD246194:GJCN-816-MONOMER Uniprot:Q3ADW4
        Length = 252

 Score = 135 (52.6 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 44/176 (25%), Positives = 81/176 (46%)

Query:   116 NHAQSVGF-STDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGT 174
             N+   + F  ++       + + +L WV     I++ +YP +++ V + T   S  +   
Sbjct:    30 NYFNDIAFVQSENLGGIAYLTQNNLGWVLMNWDIKVDRYPRFNERVLVRTAPHSFNKFFA 89

Query:   175 RRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENS 234
              R + + D   G  I +A S+W+++N + RR  K++D +   Y V    E     P E  
Sbjct:    90 YRWFEIYD-KNGIKIAKANSRWLLINTEKRRPVKINDYLYGIYGV--SYENNNILPIEEP 146

Query:   235 SSSRKISKLEDPAQYSRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMATKLFL 290
                +K+  ++   Q+       R +DLD N HVNNV Y+ W L+   + + +   L
Sbjct:   147 ---QKLLSIDIEKQFE-----VRYSDLDSNGHVNNVKYVVWALDTVPLEIISNYSL 194


>TIGR_CMR|CHY_0816 [details] [associations]
            symbol:CHY_0816 "acyl carrier protein thioesterase,
            homolog" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0000036 "ACP phosphopantetheine attachment site binding
            involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
            InterPro:IPR002864 Pfam:PF01643 EMBL:CP000141
            GenomeReviews:CP000141_GR GO:GO:0016790 GO:GO:0000036
            eggNOG:COG3884 RefSeq:YP_359670.1 STRING:Q3ADW4 GeneID:3726821
            KEGG:chy:CHY_0816 PATRIC:21274768 HOGENOM:HOG000054733 OMA:YNRFFEY
            BioCyc:CHYD246194:GJCN-816-MONOMER Uniprot:Q3ADW4
        Length = 252

 Score = 135 (52.6 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 44/176 (25%), Positives = 81/176 (46%)

Query:   116 NHAQSVGF-STDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGT 174
             N+   + F  ++       + + +L WV     I++ +YP +++ V + T   S  +   
Sbjct:    30 NYFNDIAFVQSENLGGIAYLTQNNLGWVLMNWDIKVDRYPRFNERVLVRTAPHSFNKFFA 89

Query:   175 RRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENS 234
              R + + D   G  I +A S+W+++N + RR  K++D +   Y V    E     P E  
Sbjct:    90 YRWFEIYD-KNGIKIAKANSRWLLINTEKRRPVKINDYLYGIYGV--SYENNNILPIEEP 146

Query:   235 SSSRKISKLEDPAQYSRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMATKLFL 290
                +K+  ++   Q+       R +DLD N HVNNV Y+ W L+   + + +   L
Sbjct:   147 ---QKLLSIDIEKQFE-----VRYSDLDSNGHVNNVKYVVWALDTVPLEIISNYSL 194


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.135   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      347       347   0.00098  116 3  11 22  0.48    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  256 KB (2136 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.25u 0.18s 29.43t   Elapsed:  00:00:01
  Total cpu time:  29.25u 0.18s 29.43t   Elapsed:  00:00:01
  Start:  Fri May 10 17:13:26 2013   End:  Fri May 10 17:13:27 2013

Back to top