Query 019026
Match_columns 347
No_of_seqs 257 out of 1746
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 06:04:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019026.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019026hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02370 acyl-ACP thioesterase 100.0 4E-51 8.7E-56 407.1 27.8 244 65-313 121-366 (419)
2 PF01643 Acyl-ACP_TE: Acyl-ACP 100.0 9.2E-52 2E-56 391.0 20.4 229 81-313 1-230 (261)
3 COG3884 FatA Acyl-ACP thioeste 100.0 3.5E-35 7.6E-40 267.8 17.6 235 82-342 2-238 (250)
4 PRK10800 acyl-CoA thioesterase 100.0 5.7E-27 1.2E-31 198.4 18.3 128 83-217 2-129 (130)
5 TIGR02799 thio_ybgC tol-pal sy 99.9 4.5E-25 9.7E-30 184.6 16.2 124 84-215 1-125 (126)
6 TIGR00051 acyl-CoA thioester h 99.9 1.8E-24 3.9E-29 177.7 15.9 117 87-210 1-117 (117)
7 COG0824 FcbC Predicted thioest 99.9 3.8E-24 8.2E-29 184.4 18.1 131 81-219 3-133 (137)
8 PRK07531 bifunctional 3-hydrox 99.9 3.1E-21 6.8E-26 197.9 17.6 131 81-219 343-473 (495)
9 PF13279 4HBT_2: Thioesterase- 99.9 2.2E-20 4.8E-25 155.3 16.6 119 90-217 1-121 (121)
10 cd00586 4HBT 4-hydroxybenzoyl- 99.8 1.2E-17 2.7E-22 132.9 15.3 110 84-200 1-110 (110)
11 cd03442 BFIT_BACH Brown fat-in 99.3 1E-10 2.2E-15 96.4 16.9 116 79-210 3-123 (123)
12 COG0824 FcbC Predicted thioest 99.3 1E-11 2.2E-16 107.1 7.7 78 251-344 7-99 (137)
13 TIGR00051 acyl-CoA thioester h 99.2 6.3E-11 1.4E-15 97.0 7.9 74 254-342 2-89 (117)
14 PRK10800 acyl-CoA thioesterase 99.2 1.1E-10 2.4E-15 98.6 8.0 76 252-342 5-94 (130)
15 PF13279 4HBT_2: Thioesterase- 99.1 1.6E-10 3.5E-15 95.8 6.8 71 256-343 1-85 (121)
16 TIGR02799 thio_ybgC tol-pal sy 99.0 9.2E-10 2E-14 91.7 7.9 76 252-342 3-93 (126)
17 cd03440 hot_dog The hotdog fol 99.0 2.1E-08 4.5E-13 74.5 13.9 98 85-196 2-99 (100)
18 PF03061 4HBT: Thioesterase su 98.9 4E-08 8.6E-13 74.7 11.7 79 98-190 1-79 (79)
19 cd03443 PaaI_thioesterase PaaI 98.7 8.8E-07 1.9E-11 71.8 14.8 102 81-197 11-112 (113)
20 cd00586 4HBT 4-hydroxybenzoyl- 98.6 1.4E-07 2.9E-12 74.7 8.0 62 252-313 3-78 (110)
21 PF01643 Acyl-ACP_TE: Acyl-ACP 98.6 2.4E-07 5.1E-12 88.0 10.5 98 79-196 161-259 (261)
22 PRK07531 bifunctional 3-hydrox 98.5 2.2E-07 4.8E-12 95.9 7.8 78 251-343 347-437 (495)
23 PRK10694 acyl-CoA esterase; Pr 98.3 2.8E-05 6.2E-10 66.8 15.5 112 84-211 12-131 (133)
24 PLN02370 acyl-ACP thioesterase 98.2 1.1E-05 2.3E-10 81.7 10.7 93 85-199 303-403 (419)
25 PLN02647 acyl-CoA thioesterase 97.9 0.0057 1.2E-07 62.5 24.4 213 89-309 99-356 (437)
26 COG1607 Acyl-CoA hydrolase [Li 97.8 0.0013 2.8E-08 58.2 15.1 112 86-213 16-132 (157)
27 COG3884 FatA Acyl-ACP thioeste 97.7 0.00013 2.9E-09 67.8 8.7 91 80-196 149-239 (250)
28 TIGR00369 unchar_dom_1 unchara 97.7 0.0019 4.1E-08 53.4 13.9 98 85-197 19-116 (117)
29 cd03440 hot_dog The hotdog fol 97.7 0.00032 7E-09 51.5 8.2 61 253-313 4-71 (100)
30 cd03442 BFIT_BACH Brown fat-in 97.6 0.00033 7E-09 57.4 8.3 76 251-341 9-90 (123)
31 TIGR02286 PaaD phenylacetic ac 97.6 0.0029 6.2E-08 52.2 13.9 97 85-198 17-113 (114)
32 PF03061 4HBT: Thioesterase su 97.3 0.0012 2.5E-08 49.8 6.9 64 264-342 1-71 (79)
33 PRK10293 acyl-CoA esterase; Pr 97.1 0.023 5E-07 48.9 14.2 100 85-199 37-136 (136)
34 COG5496 Predicted thioesterase 97.0 0.044 9.5E-07 46.8 14.1 110 79-203 2-118 (130)
35 PRK11688 hypothetical protein; 96.9 0.04 8.7E-07 48.1 13.9 111 85-198 40-153 (154)
36 PRK10254 thioesterase; Provisi 96.9 0.079 1.7E-06 45.8 15.4 100 85-199 37-136 (137)
37 COG2050 PaaI HGG motif-contain 96.4 0.18 3.9E-06 43.2 14.4 103 85-201 37-139 (141)
38 KOG3328 HGG motif-containing t 96.2 0.088 1.9E-06 46.1 11.5 100 85-198 40-139 (148)
39 cd03449 R_hydratase (R)-hydrat 96.2 0.071 1.5E-06 43.9 10.5 57 139-196 68-126 (128)
40 PLN02322 acyl-CoA thioesterase 95.0 1.5 3.3E-05 38.7 15.0 101 86-200 30-135 (154)
41 PF14539 DUF4442: Domain of un 94.8 0.57 1.2E-05 39.9 11.5 99 83-197 30-131 (132)
42 COG4109 Predicted transcriptio 94.6 0.28 6.1E-06 48.8 10.1 105 74-195 323-427 (432)
43 cd03443 PaaI_thioesterase PaaI 94.5 0.31 6.7E-06 39.0 8.6 76 251-342 15-97 (113)
44 PRK13691 (3R)-hydroxyacyl-ACP 94.4 0.6 1.3E-05 41.6 11.0 64 142-206 85-152 (166)
45 cd03455 SAV4209 SAV4209 is a S 94.3 0.38 8.2E-06 40.0 9.1 54 141-195 67-121 (123)
46 cd00556 Thioesterase_II Thioes 94.3 0.29 6.2E-06 38.3 7.9 58 139-197 41-98 (99)
47 cd00493 FabA_FabZ FabA/Z, beta 94.3 1.8 4E-05 35.5 13.2 86 98-193 41-126 (131)
48 cd01288 FabZ FabZ is a 17kD be 94.2 2 4.4E-05 35.4 13.5 87 100-198 44-130 (131)
49 PLN02647 acyl-CoA thioesterase 94.2 2 4.3E-05 44.2 15.6 116 83-212 290-415 (437)
50 cd03441 R_hydratase_like (R)-h 93.5 0.81 1.8E-05 37.3 9.6 55 139-194 66-124 (127)
51 cd03447 FAS_MaoC FAS_MaoC, the 93.5 0.81 1.8E-05 38.7 9.8 53 142-195 69-122 (126)
52 cd03454 YdeM YdeM is a Bacillu 93.0 0.56 1.2E-05 39.7 8.1 51 146-197 81-138 (140)
53 PRK13692 (3R)-hydroxyacyl-ACP 92.9 1.5 3.2E-05 38.8 10.8 60 144-204 87-150 (159)
54 cd03446 MaoC_like MoaC_like 92.7 0.77 1.7E-05 38.6 8.5 51 146-197 83-139 (140)
55 cd03453 SAV4209_like SAV4209_l 92.5 1.1 2.3E-05 37.5 9.0 52 143-195 70-125 (127)
56 TIGR01750 fabZ beta-hydroxyacy 92.0 4.5 9.7E-05 34.2 12.5 89 98-197 50-139 (140)
57 PRK00006 fabZ (3R)-hydroxymyri 91.8 7.4 0.00016 33.2 16.2 86 101-200 60-146 (147)
58 cd03451 FkbR2 FkbR2 is a Strep 91.8 0.99 2.2E-05 38.2 8.1 52 146-198 84-142 (146)
59 PF13452 MaoC_dehydrat_N: N-te 91.2 1 2.3E-05 37.5 7.5 52 139-191 73-131 (132)
60 TIGR02447 yiiD_Cterm thioester 91.0 9.2 0.0002 32.7 13.7 95 86-199 26-137 (138)
61 PRK04424 fatty acid biosynthes 90.6 3 6.5E-05 37.7 10.4 58 139-198 124-181 (185)
62 PRK08190 bifunctional enoyl-Co 90.1 2.4 5.3E-05 43.8 10.5 66 140-206 82-149 (466)
63 cd03452 MaoC_C MaoC_C The C-t 88.9 2.5 5.4E-05 36.2 8.2 52 146-198 81-138 (142)
64 PRK10694 acyl-CoA esterase; Pr 88.5 2.7 5.8E-05 36.0 8.1 75 252-341 14-94 (133)
65 PF13622 4HBT_3: Thioesterase- 86.2 4.9 0.00011 37.2 9.0 58 141-201 34-91 (255)
66 cd03445 Thioesterase_II_repeat 86.1 6.2 0.00014 31.5 8.4 54 141-196 39-92 (94)
67 PF07977 FabA: FabA-like domai 82.8 28 0.0006 29.3 12.6 88 98-193 47-138 (138)
68 PLN02864 enoyl-CoA hydratase 82.3 8.6 0.00019 37.6 9.2 60 141-200 94-157 (310)
69 KOG4366 Predicted thioesterase 82.2 0.19 4.1E-06 45.7 -2.2 103 89-200 56-161 (213)
70 COG1607 Acyl-CoA hydrolase [Li 79.1 14 0.00031 32.7 8.6 72 252-339 16-94 (157)
71 cd01289 FabA_like Domain of un 75.9 49 0.0011 28.2 13.6 89 98-196 44-134 (138)
72 PRK13188 bifunctional UDP-3-O- 75.4 92 0.002 32.4 14.5 87 101-200 373-461 (464)
73 PF03756 AfsA: A-factor biosyn 74.2 50 0.0011 27.5 12.2 88 97-198 39-132 (132)
74 TIGR00189 tesB acyl-CoA thioes 72.6 15 0.00032 34.6 7.5 55 141-197 44-98 (271)
75 COG2030 MaoC Acyl dehydratase 72.2 24 0.00051 30.9 8.2 58 140-199 93-155 (159)
76 cd03444 Thioesterase_II_repeat 71.5 27 0.00059 28.2 7.9 56 141-197 48-103 (104)
77 cd03448 HDE_HSD HDE_HSD The R 62.6 46 0.001 27.8 7.8 47 141-192 70-116 (122)
78 PRK10526 acyl-CoA thioesterase 60.0 39 0.00084 32.5 7.7 55 141-197 55-109 (286)
79 KOG4366 Predicted thioesterase 58.7 4.3 9.3E-05 37.1 0.8 77 257-336 58-150 (213)
80 cd01287 FabA FabA, beta-hydrox 58.7 1.2E+02 0.0027 26.3 12.8 94 98-199 49-147 (150)
81 PF01575 MaoC_dehydratas: MaoC 56.5 27 0.00059 28.7 5.3 34 140-173 75-108 (122)
82 TIGR00189 tesB acyl-CoA thioes 56.0 76 0.0017 29.7 8.9 55 142-197 215-269 (271)
83 PF13622 4HBT_3: Thioesterase- 52.6 1.2E+02 0.0025 27.9 9.5 54 143-197 200-254 (255)
84 TIGR02278 PaaN-DH phenylacetic 50.9 49 0.0011 35.9 7.5 51 146-197 604-660 (663)
85 PRK11563 bifunctional aldehyde 50.9 52 0.0011 35.7 7.7 50 147-197 617-672 (675)
86 COG1946 TesB Acyl-CoA thioeste 48.7 2.2E+02 0.0048 27.9 10.7 101 89-199 181-283 (289)
87 COG0764 FabA 3-hydroxymyristoy 48.4 1.9E+02 0.0041 25.3 10.4 61 139-201 85-146 (147)
88 PLN02864 enoyl-CoA hydratase 46.0 97 0.0021 30.3 8.1 51 141-196 253-303 (310)
89 PRK10526 acyl-CoA thioesterase 44.3 2.9E+02 0.0064 26.4 12.4 58 141-199 226-283 (286)
90 PF02551 Acyl_CoA_thio: Acyl-C 37.2 2.2E+02 0.0047 24.6 7.9 53 143-196 77-130 (131)
91 cd03450 NodN NodN (nodulation 36.5 2.8E+02 0.0061 23.9 9.4 29 141-169 85-113 (149)
92 PLN02868 acyl-CoA thioesterase 35.7 1.1E+02 0.0025 30.8 7.0 56 141-198 181-236 (413)
93 PRK13693 (3R)-hydroxyacyl-ACP 29.2 3.6E+02 0.0078 22.9 9.4 51 144-195 81-138 (142)
94 PF14765 PS-DH: Polyketide syn 25.1 4E+02 0.0087 24.6 8.4 57 137-194 225-283 (295)
95 PHA02582 10 baseplate wedge su 23.8 1.4E+02 0.0031 31.7 5.2 70 140-210 220-292 (604)
96 PLN02868 acyl-CoA thioesterase 22.0 2.3E+02 0.005 28.5 6.4 54 143-197 359-412 (413)
97 PF09500 YiiD_Cterm: Putative 21.5 5.4E+02 0.012 22.4 12.3 88 94-199 39-143 (144)
98 PF11456 DUF3019: Protein of u 21.2 2.5E+02 0.0053 23.0 5.3 33 177-209 66-98 (102)
99 PF10648 Gmad2: Immunoglobulin 21.0 2.3E+02 0.005 22.5 4.9 43 152-195 6-49 (88)
100 KOG2763 Acyl-CoA thioesterase 20.7 8.8E+02 0.019 24.5 10.3 199 105-310 31-266 (357)
No 1
>PLN02370 acyl-ACP thioesterase
Probab=100.00 E-value=4e-51 Score=407.09 Aligned_cols=244 Identities=42% Similarity=0.767 Sum_probs=212.1
Q ss_pred CCcccccccccCCCCCCccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEE
Q 019026 65 PCSLADRLRLGTLTEDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTA 144 (347)
Q Consensus 65 ~~~~~~~~~~~~~~e~~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~ 144 (347)
...|.|.+.+|++.+||++|+++|+|++||||.+|+++++++++||||++..|++.+|+..++|..+++|.+.|++|||+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~y~~~f~Ir~yEvD~~g~lsl~~L~n~lQd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLt 200 (419)
T PLN02370 121 SDMLIDPFGIGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVT 200 (419)
T ss_pred CcccccccccCceeccCcEEEEEEEEeeEEECCCCCCCHHHHHHHHHHHHHHHHHHhCccccccccHHHHHhCCceEEEE
Confidence 46799999999999999999999999999999999999999999999999999999997444444456789999999999
Q ss_pred EeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCCHHHHHHHhhcCccc
Q 019026 145 RMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRE 224 (347)
Q Consensus 145 r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp~el~e~~~~~~p~~ 224 (347)
+++|+|.|+|.|||+|+|+||+.+++++++.|+|+|+|.++|+++++|.|.||+||++||||++||++++..+..+..+
T Consensus 201 r~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~~Ge~la~A~SvWV~mD~~TRRpvRIP~Evr~~i~~y~~~- 279 (419)
T PLN02370 201 RMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIEPYFLN- 279 (419)
T ss_pred EEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECCCCeEEEEEEEEEEEEECCCCcccCCCHHHHHhhhhcccc-
Confidence 9999999999999999999999999999999999999944899999999999999999999999999996655432211
Q ss_pred ccccCCccCccccccCCCCCCcc-cccccceecccCCCCCCCccchhHHHHHHHHHhhHhHhhccceEEEEEE-eecCCC
Q 019026 225 LRLAFPEENSSSSRKISKLEDPA-QYSRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMATKLFLAFLFLP-NRNCYI 302 (347)
Q Consensus 225 ~~l~~p~~~~~~~~ki~k~~~p~-~~~~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~~~~~l~~i~I~-~~E~~~ 302 (347)
+...++ ...+||+++++.. ++....++|||+|||.||||||++|++|++|++|.+++++|.+++++|+ ++||.+
T Consensus 280 ~~~~i~----~~~~kl~~l~~~~~~~~~~~~~VRysDLD~NgHVNNvkYi~Wild~lP~e~l~~~~l~~i~I~Y~kE~~~ 355 (419)
T PLN02370 280 SDPVVN----EDSRKLPKLDDKTADYIRKGLTPRWSDLDVNQHVNNVKYIGWILESAPPPIMESHELAAITLEYRRECGR 355 (419)
T ss_pred cccccc----cccccCCccccccccceeeeeeecHHHCcccCccccHHHHHHHHhhCchhhhhcceEEEEEEEEcccCCC
Confidence 111121 1246777665432 2334569999999999999999999999999999999999999999999 999999
Q ss_pred CCEEEEEEEec
Q 019026 303 STTLKFFLSNS 313 (347)
Q Consensus 303 gd~v~v~t~~~ 313 (347)
||.|++.+...
T Consensus 356 gd~V~s~~~~~ 366 (419)
T PLN02370 356 DSVLQSLTAVS 366 (419)
T ss_pred CCEEEEEEeec
Confidence 99999998754
No 2
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=100.00 E-value=9.2e-52 Score=391.02 Aligned_cols=229 Identities=33% Similarity=0.571 Sum_probs=166.9
Q ss_pred CccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEE
Q 019026 81 GLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVV 160 (347)
Q Consensus 81 ~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V 160 (347)
|++|+++++|+++|||.+|+++++.+++|||++|..|+.++|++.+.++++|+|.+.|++|||++++++|.++|.+||+|
T Consensus 1 g~~y~~~~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~lG~~~~~~~~~~~l~~~~~~Wvl~r~~i~i~r~P~~~e~i 80 (261)
T PF01643_consen 1 GLVYEKEFTVRYYECDPNGRLKLSALLNYFQEAATEHAESLGFGMDYFGSTPELKKQGLAWVLSRYQIEIHRYPRWGEKI 80 (261)
T ss_dssp ---EEEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHHTT-SHHH------HHCTTEEEEEEEEEEEESS--BTT-EE
T ss_pred CceEEEEEEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcccchhhhhHhhcCcEEEEEEEEEEEEecCCCCCEE
Confidence 57899999999999999999999999999999999999999999886666677999999999999999999999999999
Q ss_pred EEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCCHHHHHHHhhcCcccccccCCccCccccccC
Q 019026 161 EIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENSSSSRKI 240 (347)
Q Consensus 161 ~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp~el~e~~~~~~p~~~~l~~p~~~~~~~~ki 240 (347)
+|+||+.+.+++++.|+|.|+|.++|+++++|.|.||+||++||||+++|+++.+.|...+|+. ++++....++++
T Consensus 81 ~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~WvliD~~trr~~ri~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 156 (261)
T PF01643_consen 81 TIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWVLIDLETRRPVRIPEEIIEEYGPFFPDE----LPEEDIRKLPKI 156 (261)
T ss_dssp EEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEEEEETTT-SEE---GGCTCCGGGGB--------T-EESSS----
T ss_pred EEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEhhhCCcccCCHHHHhhhhhhcccc----cccccccccccc
Confidence 9999999999999999999998789999999999999999999999999999888876444431 222222234455
Q ss_pred CCCCCcccccccceecccCCCCCCCccchhHHHHHHHHHhhHhHhhccceEEEEEE-eecCCCCCEEEEEEEec
Q 019026 241 SKLEDPAQYSRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMATKLFLAFLFLP-NRNCYISTTLKFFLSNS 313 (347)
Q Consensus 241 ~k~~~p~~~~~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~~~~~l~~i~I~-~~E~~~gd~v~v~t~~~ 313 (347)
++....+.....+++|||+|||+||||||++|++|++|++|.++++.+.+++++|+ ++|+.+||+|.+.+.++
T Consensus 157 ~~~~~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~~~~~~~~~~i~I~y~~E~~~gd~i~~~~~~~ 230 (261)
T PF01643_consen 157 PKNPPEEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEEFLEKYQIKSIDINYKKEIRYGDTITSYTEVE 230 (261)
T ss_dssp ------TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HHHHCCEEEEEEEEEE-S--BTT-EEEEEEEEE
T ss_pred cccCChhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcchhhccCCcEEEEEEEccccCCCCEEEEEEEEc
Confidence 43222233345789999999999999999999999999999999999999999999 99999999999988754
No 3
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=100.00 E-value=3.5e-35 Score=267.78 Aligned_cols=235 Identities=21% Similarity=0.318 Sum_probs=193.7
Q ss_pred ccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEE
Q 019026 82 LSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVE 161 (347)
Q Consensus 82 ~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~ 161 (347)
..|+..+.|.+++.|+.|++..+..+.+..+++..|...+|-.... .+.+.++.|+|.++.+++.++|.++|.|+
T Consensus 2 ~~~k~~~~vP~~~~d~~g~i~~~~~l~l~~~i~~~Qsi~lg~~~~~-----~lee~~l~WiV~~~~i~~ir~pef~e~it 76 (250)
T COG3884 2 SVDKQNMPVPFYWPDAVGDIDITSRLRLDLQIRGIQSIGLGQLDVA-----GLEEYHLLWIVRRTEIDVIRPPEFGEMIT 76 (250)
T ss_pred cchhhcCCCccchhhhcCCcchhhhhhhhhhhcceeecccchhhhh-----hHhhcCceEEEEEEEEEEeeccccCCcce
Confidence 3567778899999999999999999999999999887777733221 46899999999999999999999999999
Q ss_pred EEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCCHHHHHHHhhcCcccccccCCccCccccccCC
Q 019026 162 IETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENSSSSRKIS 241 (347)
Q Consensus 162 I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp~el~e~~~~~~p~~~~l~~p~~~~~~~~ki~ 241 (347)
|+||+.++++++++|+|.+.+ .|+.++.+.+.|++||.+||||.++++++...|..... .+++-.| +
T Consensus 77 i~t~~~s~~~ffcyrrf~~~~--~gg~Lie~~a~wilmn~dTrkp~ri~~d~la~~~~t~~-~k~~r~~----------~ 143 (250)
T COG3884 77 IETWCSSISNFFCYRRFRLDG--RGGGLIEIEAFWILMNRDTRKPARITDDLLAPFNLTTE-KKRLRWP----------K 143 (250)
T ss_pred EEEeeccccceEEEEEEEEec--CCCcEEEEEEEEEEEccccccceeccHHHhhhhcccch-hheeccc----------c
Confidence 999999999999999999997 78889999999999999999999999999998865211 1111111 1
Q ss_pred CCCCcccc-cccceecccCCCCCCCccchhHHHHHHHHHhhHhHhhccceEEEEEE-eecCCCCCEEEEEEEeccccccc
Q 019026 242 KLEDPAQY-SRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMATKLFLAFLFLP-NRNCYISTTLKFFLSNSCLCMTE 319 (347)
Q Consensus 242 k~~~p~~~-~~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~~~~~l~~i~I~-~~E~~~gd~v~v~t~~~~~c~~~ 319 (347)
.+..+.+. ....|.||+.|||+||||||++|++|++|.++.+++..+.+.++.|. .+|+.+|+++++.+.+.
T Consensus 144 ~l~~~~e~s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~~~~~p~r~~l~y~keva~G~~iti~~e~~------ 217 (250)
T COG3884 144 YLSSRLEASEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFLKLYGPLRLTLEYVKEVAPGEKITIVYEVH------ 217 (250)
T ss_pred ccCccccccccccceeEEEeeccccccccceehHHHHHHHhhhhHhhcccceeEEEEEcccCCCCeEEEEEEEc------
Confidence 11112222 23579999999999999999999999999999999999999999999 99999999999988876
Q ss_pred cccccccCCCCCCcceEEEeeec
Q 019026 320 HASRCHRHPRTPDYHLRLQTRMP 342 (347)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~ 342 (347)
-..++|.-.+++.+-=|+=++
T Consensus 218 --~~~s~~~f~~d~~v~~lt~i~ 238 (250)
T COG3884 218 --PLESKHQFTSDGQVNALTYIV 238 (250)
T ss_pred --ccCceeeecCCcceEEEEEEE
Confidence 233555555566666665443
No 4
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.95 E-value=5.7e-27 Score=198.41 Aligned_cols=128 Identities=12% Similarity=0.151 Sum_probs=120.4
Q ss_pred cEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEE
Q 019026 83 SYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEI 162 (347)
Q Consensus 83 ~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I 162 (347)
+|..+++|+|+|||.+|||+|++|++|||+|+.+++..+|++.. .+.+.|.+|++++++++|++|+.+||+|+|
T Consensus 2 ~f~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~~~~------~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v 75 (130)
T PRK10800 2 LFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQ------ALLAERVAFVVRKMTVEYYAPARLDDMLEV 75 (130)
T ss_pred ceEEEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHHcCCCHH------HHHhCCCEEEEEEEEEEEcCcccCCCEEEE
Confidence 57889999999999999999999999999999999999998764 466789999999999999999999999999
Q ss_pred EEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCCHHHHHHH
Q 019026 163 ETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEY 217 (347)
Q Consensus 163 ~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp~el~e~~ 217 (347)
+||+.++++.++...|++++ .+|+++++|.+.||++|.+++||+++|+++++.|
T Consensus 76 ~t~v~~~~~~s~~~~~~i~~-~~g~~~a~~~~~~v~~d~~~~r~~~iP~~l~~~~ 129 (130)
T PRK10800 76 QSEITSMRGTSLTFTQRIVN-AEGTLLNEAEVLIVCVDPLKMKPRALPKSIVAEF 129 (130)
T ss_pred EEEEEeeCcEEEEEEEEEEc-CCCeEEEEEEEEEEEEECCCCcCcCCCHHHHHhh
Confidence 99999999999889999998 7899999999999999999999999999998765
No 5
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.93 E-value=4.5e-25 Score=184.60 Aligned_cols=124 Identities=10% Similarity=0.172 Sum_probs=116.0
Q ss_pred EEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhh-hcCceEEEEEeEEEEeecCCCCCEEEE
Q 019026 84 YKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMR-KLHLIWVTARMHIEIYKYPAWSDVVEI 162 (347)
Q Consensus 84 y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~-~~gl~WVV~r~~Iei~r~p~~gD~V~I 162 (347)
|+.+++|+|+|||++|||+++.|++||++|+..++.++|++.+ .+. +.|.+|++++++++|.+|+++||.|+|
T Consensus 1 f~~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~~g~~~~------~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v 74 (126)
T TIGR02799 1 FRWPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRALGFEQS------ALLEETGLVFVVRSMELDYLKPARLDDLLTV 74 (126)
T ss_pred CcceEEEEEeccCCCceEEechHHHHHHHHHHHHHHHcCCCHH------HHhhcCCcEEEEEEEEEEEcCcccCCCEEEE
Confidence 4678999999999999999999999999999999999999864 353 569999999999999999999999999
Q ss_pred EEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCCHHHHH
Q 019026 163 ETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVRE 215 (347)
Q Consensus 163 ~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp~el~e 215 (347)
+||+.++++.++.++|.+++ +|+++++|.++||++|.+++||+++|+++++
T Consensus 75 ~~~v~~~~~~~~~~~~~i~~--~g~~~a~~~~~~v~vd~~~~~~~~~p~~~~~ 125 (126)
T TIGR02799 75 TTRVVELKGASLVFAQEVRR--GDTLLCEATVEVACVDASDMRPRRLPAELRA 125 (126)
T ss_pred EEEEEecCceEEEEEEEEEe--CCEEEEEEEEEEEEEECCCCcCcCCCHHHhh
Confidence 99999999999999999995 7899999999999999999999999999865
No 6
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.92 E-value=1.8e-24 Score=177.70 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=109.3
Q ss_pred EEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEE
Q 019026 87 KFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWC 166 (347)
Q Consensus 87 ~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv 166 (347)
+++|+|+|||.+|||+++.|++|||+|+..|++.+|++.. .+.+.|++|++++++++|++|+.+||.|+|+||+
T Consensus 1 ~~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~~~~------~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~ 74 (117)
T TIGR00051 1 PVRVYYEDTDAQGIVYHANYLRYCERARTEFLRSLGFPQS------VLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQI 74 (117)
T ss_pred CEEEEEeccCCCcEEEehHHHHHHHHHHHHHHHHcCCCHH------HHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEE
Confidence 3689999999999999999999999999999999998754 4677899999999999999999999999999999
Q ss_pred eeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCC
Q 019026 167 QSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVS 210 (347)
Q Consensus 167 ~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp 210 (347)
.++++.++.+.|+|++ .+|++++.+.+.||++|.+++|++++|
T Consensus 75 ~~~~~~s~~~~~~i~~-~~~~~~~~~~~~~v~~d~~~~r~~~ip 117 (117)
T TIGR00051 75 EELNGFSFVFSQEIFN-EDEALLKAATVIVVCVDPKKQKPVAIP 117 (117)
T ss_pred EecCcEEEEEEEEEEe-CCCcEEEeeEEEEEEEECCCCeEcCCC
Confidence 9999999999999998 778888888888999999999999987
No 7
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.92 E-value=3.8e-24 Score=184.40 Aligned_cols=131 Identities=12% Similarity=0.219 Sum_probs=123.0
Q ss_pred CccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEE
Q 019026 81 GLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVV 160 (347)
Q Consensus 81 ~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V 160 (347)
+..|..+++|+|+|+|.+|||+|++|+.|||+|+.++++.+|++.. +|.+.|++|++++.+|+|++|.++||.+
T Consensus 3 ~~~~~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~~g~~~~------~~~~~~~~~~v~~~~i~y~~p~~~~d~l 76 (137)
T COG0824 3 SFPFSTPIRVRYEDTDAMGHVNNANYLVFFEEARTEFLRALGFDYA------DLEEGGIAFVVVEAEIDYLRPARLGDVL 76 (137)
T ss_pred CcceEEEEEEEhhhcCcccEEecchHHHHHHHHHHHHHHHcCCCHH------HHhhCCcEEEEEEEEeEECCCccCCCEE
Confidence 5678999999999999999999999999999999999999999865 5777789999999999999999999999
Q ss_pred EEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCCHHHHHHHhh
Q 019026 161 EIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLV 219 (347)
Q Consensus 161 ~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp~el~e~~~~ 219 (347)
+|+||+.++++.++...|+|++ ++ +++++|.+++|++|.+++||+++|+++++.+..
T Consensus 77 ~v~~~v~~~~~~s~~~~~~i~~-~~-~l~a~~~~~~V~v~~~~~kp~~~P~~~~~~l~~ 133 (137)
T COG0824 77 TVRTRVEELGGKSLTLGYEIVN-ED-ELLATGETTLVCVDLKTGKPVPLPPELREALEA 133 (137)
T ss_pred EEEEEEEeecCeEEEEEEEEEe-CC-EEEEEEEEEEEEEECCCCCcccCCHHHHHHHHH
Confidence 9999999999999999999998 44 999999999999999999999999999998753
No 8
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.87 E-value=3.1e-21 Score=197.94 Aligned_cols=131 Identities=15% Similarity=0.024 Sum_probs=121.6
Q ss_pred CccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEE
Q 019026 81 GLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVV 160 (347)
Q Consensus 81 ~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V 160 (347)
..+++.+++|+++|||.+|||+|+.|++||++++.+++..+|++.+ ....+.+|++++++|+|++|+++||.|
T Consensus 343 ~~~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~~G~~~~-------~~~~~~~~vvv~~~i~y~rp~~~gD~v 415 (495)
T PRK07531 343 QPLRLVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRLIGVDAA-------YVAAGHSYYTVETHIRHLGEAKAGQAL 415 (495)
T ss_pred CceEEEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHHcCCCHH-------HHhcCCcEEEEEEEEEEcccCCCCCEE
Confidence 4455789999999999999999999999999999999999999753 334589999999999999999999999
Q ss_pred EEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCCHHHHHHHhh
Q 019026 161 EIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVSDDVREEYLV 219 (347)
Q Consensus 161 ~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp~el~e~~~~ 219 (347)
+|+||+.++++.++.+.|+|++ .+|+++++|.+.||++|++++|++++|+++++.+..
T Consensus 416 ~I~t~v~~~~~~s~~~~~~i~~-~~g~l~A~g~~~~v~vD~~trr~~~iP~e~r~~l~~ 473 (495)
T PRK07531 416 HVETQLLSGDEKRLHLFHTLYD-AGGELIATAEHMLLHVDLKAGKAVPAPAAVLAALKP 473 (495)
T ss_pred EEEEEEEecCCcEEEEEEEEEC-CCCcEEEEEEEEEEEEECCCCccCCCCHHHHHHHHH
Confidence 9999999999999999999998 899999999999999999999999999999988764
No 9
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.86 E-value=2.2e-20 Score=155.28 Aligned_cols=119 Identities=19% Similarity=0.247 Sum_probs=100.0
Q ss_pred eeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEEeee
Q 019026 90 VRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSE 169 (347)
Q Consensus 90 Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~ 169 (347)
|+|+||| +|||+|++|+.||++|+.+++.+.|+ .+ .+.+.|++|++++.+++|.+|..+||.++|++++.++
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~~g~-~~------~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~ 72 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAREEFLEELGL-YD------ELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEI 72 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHHHHHHHHTS-CH------HHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHHHHHHhcch-hh------HHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEE
Confidence 7999999 99999999999999999999999998 43 4778899999999999999999999999999999999
Q ss_pred CCeEEEEEEEEEECCCCcE--EEEEEEEEEEEeCCCCceecCCHHHHHHH
Q 019026 170 GRIGTRRDWILKDYATGEV--IGRATSKWVMMNQDTRRLQKVSDDVREEY 217 (347)
Q Consensus 170 ~r~~~~R~f~I~d~~~Gev--ia~a~S~wVlvDl~trRpvrlp~el~e~~ 217 (347)
++.++...|.|++..+|+. +|+|.+.+|++|.++ |+.++|+++++.+
T Consensus 73 ~~~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~~~-r~~~~P~~~~~~l 121 (121)
T PF13279_consen 73 GGKSFRFEQEIFRPADGKGELAATGRTVMVFVDYKT-RSVPIPDELREAL 121 (121)
T ss_dssp ESSEEEEEEEEEECSTTEEEEEEEEEEEEEEEETTT-CE-B--HHHHHHH
T ss_pred CCcEEEEEEEEEEcCCCceEEEEEEEEEEEEEeCCC-CcCCCCHHHHhcC
Confidence 9999999999997445655 999999999999998 6999999998764
No 10
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.77 E-value=1.2e-17 Score=132.91 Aligned_cols=110 Identities=15% Similarity=0.187 Sum_probs=102.9
Q ss_pred EEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEE
Q 019026 84 YKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIE 163 (347)
Q Consensus 84 y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~ 163 (347)
|..++.|+++|+|.+||+++..|++|+++++..++...|++.+ .+.+.+.+|++.+.+++|.+|+.+||+|+|+
T Consensus 1 ~~~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~ 74 (110)
T cd00586 1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGYD------ELEEQGLGLVVVELEIDYLRPLRLGDRLTVE 74 (110)
T ss_pred CcEEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCCHH------HHHhCCceEEEEEeEeeEcCccCCCCEEEEE
Confidence 4678899999999999999999999999999999999998754 3567899999999999999999999999999
Q ss_pred EEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019026 164 TWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMN 200 (347)
Q Consensus 164 Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvD 200 (347)
+|+.+.++.+..+.+.+++ ++|+++++|.+.|+++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~-~~g~~~a~~~~~~~~~d 110 (110)
T cd00586 75 TRVLRLGRKSFTFEQEIFR-EDGELLATAETVLVCVD 110 (110)
T ss_pred EEEEecCcEEEEEEEEEEC-CCCeEEEEEEEEEEEeC
Confidence 9999999999999999998 57999999999999987
No 11
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=99.33 E-value=1e-10 Score=96.36 Aligned_cols=116 Identities=16% Similarity=0.097 Sum_probs=96.5
Q ss_pred CCCccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEe-EEEEeecCCCC
Q 019026 79 EDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARM-HIEIYKYPAWS 157 (347)
Q Consensus 79 e~~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~-~Iei~r~p~~g 157 (347)
+..-.+...+.|++.++|..|+++...|+.++++++...+.... +..+++... +++|.+|..+|
T Consensus 3 ~~~~~~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~~~---------------~~~~~~~~~~~~~f~~p~~~g 67 (123)
T cd03442 3 MEDTELSTRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAYRHA---------------GGRVVTASVDRIDFLKPVRVG 67 (123)
T ss_pred CCccceEEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHHHHh---------------CCcEEEEEECceEEcCccccC
Confidence 44567788999999999999999999999999999877654321 112444455 79999999999
Q ss_pred CEEEEEEEEeeeCCeEEEEEEEEEECC----CCcEEEEEEEEEEEEeCCCCceecCC
Q 019026 158 DVVEIETWCQSEGRIGTRRDWILKDYA----TGEVIGRATSKWVMMNQDTRRLQKVS 210 (347)
Q Consensus 158 D~V~I~Twv~~~~r~~~~R~f~I~d~~----~Gevia~a~S~wVlvDl~trRpvrlp 210 (347)
|.|.+++++.+.++.++..++++++.. +++++++|..++|++| .++||.++|
T Consensus 68 d~l~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~-~~~~~~~~p 123 (123)
T cd03442 68 DVVELSARVVYTGRTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALD-EDGKPRPVP 123 (123)
T ss_pred cEEEEEEEEEEecCCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC-CCCCeeeCC
Confidence 999999999999999999999999722 2479999999999999 468998886
No 12
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.27 E-value=1e-11 Score=107.11 Aligned_cols=78 Identities=17% Similarity=0.138 Sum_probs=68.1
Q ss_pred ccceecccCCCCCCCccchhHHHHHHHHHhhHhHhhc--------------cceEEEEEE-eecCCCCCEEEEEEEeccc
Q 019026 251 RLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMATK--------------LFLAFLFLP-NRNCYISTTLKFFLSNSCL 315 (347)
Q Consensus 251 ~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~~~--------------~~l~~i~I~-~~E~~~gd~v~v~t~~~~~ 315 (347)
..+++|+|+|+|.+|||||++|+.|++++. .+++.. ..+.+.+|+ ++|+++||.+++.+.++
T Consensus 7 ~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar-~~~l~~~g~~~~~~~~~~~~~~v~~~~i~y~~p~~~~d~l~v~~~v~-- 83 (137)
T COG0824 7 STPIRVRYEDTDAMGHVNNANYLVFFEEAR-TEFLRALGFDYADLEEGGIAFVVVEAEIDYLRPARLGDVLTVRTRVE-- 83 (137)
T ss_pred EEEEEEEhhhcCcccEEecchHHHHHHHHH-HHHHHHcCCCHHHHhhCCcEEEEEEEEeEECCCccCCCEEEEEEEEE--
Confidence 367999999999999999999999999984 333322 578999999 99999999999999999
Q ss_pred cccccccccccCCCCCCcceEEEeeecCc
Q 019026 316 CMTEHASRCHRHPRTPDYHLRLQTRMPTG 344 (347)
Q Consensus 316 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (347)
..++.++.++++|..+
T Consensus 84 -------------~~~~~s~~~~~~i~~~ 99 (137)
T COG0824 84 -------------ELGGKSLTLGYEIVNE 99 (137)
T ss_pred -------------eecCeEEEEEEEEEeC
Confidence 8999999999998543
No 13
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.19 E-value=6.3e-11 Score=96.96 Aligned_cols=74 Identities=7% Similarity=0.103 Sum_probs=60.3
Q ss_pred eecccCCCCCCCccchhHHHHHHHHHh---------hHhHhhc----cceEEEEEE-eecCCCCCEEEEEEEeccccccc
Q 019026 254 LIPRRADLDMNQHVNNVTYIGWLLEVS---------TMRMATK----LFLAFLFLP-NRNCYISTTLKFFLSNSCLCMTE 319 (347)
Q Consensus 254 ~~vr~sDiD~n~HVNN~~Y~~w~~d~l---------p~e~~~~----~~l~~i~I~-~~E~~~gd~v~v~t~~~~~c~~~ 319 (347)
++|+++|+|.||||||+.|+.|++++. +...+.. ..+.+.+++ ++++++||.|.+.+++.
T Consensus 2 ~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~~------ 75 (117)
T TIGR00051 2 VRVYYEDTDAQGIVYHANYLRYCERARTEFLRSLGFPQSVLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQIE------ 75 (117)
T ss_pred EEEEEeccCCCcEEEehHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEEE------
Confidence 679999999999999999999999983 2222222 368999999 99999999999999998
Q ss_pred cccccccCCCCCCcceEEEeeec
Q 019026 320 HASRCHRHPRTPDYHLRLQTRMP 342 (347)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~ 342 (347)
..++.++++..+|-
T Consensus 76 ---------~~~~~s~~~~~~i~ 89 (117)
T TIGR00051 76 ---------ELNGFSFVFSQEIF 89 (117)
T ss_pred ---------ecCcEEEEEEEEEE
Confidence 66666666666554
No 14
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.15 E-value=1.1e-10 Score=98.56 Aligned_cols=76 Identities=11% Similarity=0.074 Sum_probs=64.2
Q ss_pred cceecccCCCCCCCccchhHHHHHHHHHhhHh---------Hhh----ccceEEEEEE-eecCCCCCEEEEEEEeccccc
Q 019026 252 LGLIPRRADLDMNQHVNNVTYIGWLLEVSTMR---------MAT----KLFLAFLFLP-NRNCYISTTLKFFLSNSCLCM 317 (347)
Q Consensus 252 ~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e---------~~~----~~~l~~i~I~-~~E~~~gd~v~v~t~~~~~c~ 317 (347)
.+++|+++|+|.+|||||++|++|++++.-.- .+. ...+.+.+|+ ++|+++||.|++.++++
T Consensus 5 ~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v~t~v~---- 80 (130)
T PRK10800 5 WPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALLAERVAFVVRKMTVEYYAPARLDDMLEVQSEIT---- 80 (130)
T ss_pred EEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEEEEEEcCcccCCCEEEEEEEEE----
Confidence 57889999999999999999999999884211 111 2468899999 99999999999999999
Q ss_pred cccccccccCCCCCCcceEEEeeec
Q 019026 318 TEHASRCHRHPRTPDYHLRLQTRMP 342 (347)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (347)
..++.++++..+|.
T Consensus 81 -----------~~~~~s~~~~~~i~ 94 (130)
T PRK10800 81 -----------SMRGTSLTFTQRIV 94 (130)
T ss_pred -----------eeCcEEEEEEEEEE
Confidence 88888888888875
No 15
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.11 E-value=1.6e-10 Score=95.82 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=54.3
Q ss_pred cccCCCCCCCccchhHHHHHHHHHhhHhHhh-------------ccceEEEEEE-eecCCCCCEEEEEEEeccccccccc
Q 019026 256 PRRADLDMNQHVNNVTYIGWLLEVSTMRMAT-------------KLFLAFLFLP-NRNCYISTTLKFFLSNSCLCMTEHA 321 (347)
Q Consensus 256 vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~~-------------~~~l~~i~I~-~~E~~~gd~v~v~t~~~~~c~~~~~ 321 (347)
||++|+| +|||||++|+.|++++. .+++. ...+.+.+|+ ++|+++||.+.+.+.+.
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar-~~~~~~~g~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~-------- 70 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAR-EEFLEELGLYDELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVE-------- 70 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHH-HHHHHHHTSCHHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEE--------
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHH-HHHHHhcchhhHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEE--------
Confidence 7899999 99999999999999984 34442 2468999999 99999999999999988
Q ss_pred cccccCCCCCCcceEEEeeecC
Q 019026 322 SRCHRHPRTPDYHLRLQTRMPT 343 (347)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~ 343 (347)
..++.++++.++|..
T Consensus 71 -------~~~~~s~~~~~~i~~ 85 (121)
T PF13279_consen 71 -------EIGGKSFRFEQEIFR 85 (121)
T ss_dssp -------EEESSEEEEEEEEEE
T ss_pred -------EECCcEEEEEEEEEE
Confidence 788888888888853
No 16
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.02 E-value=9.2e-10 Score=91.75 Aligned_cols=76 Identities=9% Similarity=0.074 Sum_probs=60.6
Q ss_pred cceecccCCCCCCCccchhHHHHHHHHHh---------hH-hHhhc----cceEEEEEE-eecCCCCCEEEEEEEecccc
Q 019026 252 LGLIPRRADLDMNQHVNNVTYIGWLLEVS---------TM-RMATK----LFLAFLFLP-NRNCYISTTLKFFLSNSCLC 316 (347)
Q Consensus 252 ~~~~vr~sDiD~n~HVNN~~Y~~w~~d~l---------p~-e~~~~----~~l~~i~I~-~~E~~~gd~v~v~t~~~~~c 316 (347)
.+++||++|+|.+|||||+.|+.|++++. +. +.... ..+....|+ ++++++||.|.+.+++.
T Consensus 3 ~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~--- 79 (126)
T TIGR02799 3 WPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRALGFEQSALLEETGLVFVVRSMELDYLKPARLDDLLTVTTRVV--- 79 (126)
T ss_pred ceEEEEEeccCCCceEEechHHHHHHHHHHHHHHHcCCCHHHHhhcCCcEEEEEEEEEEEcCcccCCCEEEEEEEEE---
Confidence 46889999999999999999999998773 11 12111 368899999 99999999999999998
Q ss_pred ccccccccccCCCCCCcceEEEeeec
Q 019026 317 MTEHASRCHRHPRTPDYHLRLQTRMP 342 (347)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (347)
..+..++.+..+|-
T Consensus 80 ------------~~~~~~~~~~~~i~ 93 (126)
T TIGR02799 80 ------------ELKGASLVFAQEVR 93 (126)
T ss_pred ------------ecCceEEEEEEEEE
Confidence 66666666666554
No 17
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=99.00 E-value=2.1e-08 Score=74.50 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=87.7
Q ss_pred EEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEE
Q 019026 85 KEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 85 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~T 164 (347)
...+.|+++|+|.+++++...++.+++.++..++...+. .+..|++.+++++|.+|+..||.|.+++
T Consensus 2 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~g~~v~~~~ 68 (100)
T cd03440 2 VLRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGG-------------RGLGAVTLSLDVRFLRPVRPGDTLTVEA 68 (100)
T ss_pred EEEEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHHhcc-------------CCCeEEEEEEEeEEecCCCCCCEEEEEE
Confidence 347899999999999999999999999999999876543 3568999999999999999999999999
Q ss_pred EEeeeCCeEEEEEEEEEECCCCcEEEEEEEEE
Q 019026 165 WCQSEGRIGTRRDWILKDYATGEVIGRATSKW 196 (347)
Q Consensus 165 wv~~~~r~~~~R~f~I~d~~~Gevia~a~S~w 196 (347)
++.+.++........+.+ .+|++++.+.+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 99 (100)
T cd03440 69 EVVRVGRSSVTVEVEVRN-EDGKLVATATATF 99 (100)
T ss_pred EEEeccccEEEEEEEEEC-CCCCEEEEEEEEe
Confidence 999999888888889988 6799999997765
No 18
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=98.88 E-value=4e-08 Score=74.70 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=71.6
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEE
Q 019026 98 NKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRD 177 (347)
Q Consensus 98 ~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~ 177 (347)
+|+|+...|+.|+++++..++...+.+ +..+++...+++|.+|...||.|++++|+.+.++.++..+
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~~~~~-------------~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~ 67 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRSHGGD-------------GRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVE 67 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHSS-------------TEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHHhccC-------------CcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEE
Confidence 699999999999999999999887653 4679999999999999999999999999999999999999
Q ss_pred EEEEECCCCcEEE
Q 019026 178 WILKDYATGEVIG 190 (347)
Q Consensus 178 f~I~d~~~Gevia 190 (347)
+++++ ++++++|
T Consensus 68 ~~v~~-~~~~~~~ 79 (79)
T PF03061_consen 68 VEVYS-EDGRLCA 79 (79)
T ss_dssp EEEEE-TTSCEEE
T ss_pred EEEEE-CCCcEEC
Confidence 99999 8888775
No 19
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=98.70 E-value=8.8e-07 Score=71.81 Aligned_cols=102 Identities=15% Similarity=0.052 Sum_probs=88.5
Q ss_pred CccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEE
Q 019026 81 GLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVV 160 (347)
Q Consensus 81 ~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V 160 (347)
.......+++...++|..|.++...++.+++.++...+....- .+..+++.+++++|.+|+.. +.|
T Consensus 11 ~~~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~~~~-------------~~~~~~~~~~~i~f~~p~~~-~~v 76 (113)
T cd03443 11 PGRVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALSALP-------------PGALAVTVDLNVNYLRPARG-GDL 76 (113)
T ss_pred CCeEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhhccC-------------CCCceEEEEEEEeEEcCCCC-CeE
Confidence 3356778899999999999999999999999999877654321 24567889999999999999 999
Q ss_pred EEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 161 EIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 161 ~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
.+++++.+.++.....+..+++ ++|+++++|...|+
T Consensus 77 ~~~~~v~~~g~~~~~~~~~~~~-~~~~~~a~a~~~~~ 112 (113)
T cd03443 77 TARARVVKLGRRLAVVEVEVTD-EDGKLVATARGTFA 112 (113)
T ss_pred EEEEEEEecCceEEEEEEEEEC-CCCCEEEEEEEEEe
Confidence 9999999999988888999998 67999999999886
No 20
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=98.63 E-value=1.4e-07 Score=74.67 Aligned_cols=62 Identities=23% Similarity=0.201 Sum_probs=53.3
Q ss_pred cceecccCCCCCCCccchhHHHHHHHHHhhHhHh-------------hccceEEEEEE-eecCCCCCEEEEEEEec
Q 019026 252 LGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMA-------------TKLFLAFLFLP-NRNCYISTTLKFFLSNS 313 (347)
Q Consensus 252 ~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~-------------~~~~l~~i~I~-~~E~~~gd~v~v~t~~~ 313 (347)
..+.|+++|+|.|||+||..|++|+.++....+. ..+.+..+.++ ++|+..||.|.+.+++.
T Consensus 3 ~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~~~~~ 78 (110)
T cd00586 3 LEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGYDELEEQGLGLVVVELEIDYLRPLRLGDRLTVETRVL 78 (110)
T ss_pred EEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCCHHHHHhCCceEEEEEeEeeEcCccCCCCEEEEEEEEE
Confidence 4678999999999999999999999999754322 13468899999 99999999999999987
No 21
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=98.61 E-value=2.4e-07 Score=87.96 Aligned_cols=98 Identities=14% Similarity=0.232 Sum_probs=68.7
Q ss_pred CCCccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCC
Q 019026 79 EDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSD 158 (347)
Q Consensus 79 e~~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD 158 (347)
.....+...++||++|+|.||||||..|++|+.|+--..+ .+ ...+.++.|.|.++..+||
T Consensus 161 ~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~~----------------~~---~~~~~~i~I~y~~E~~~gd 221 (261)
T PF01643_consen 161 PEEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEEF----------------LE---KYQIKSIDINYKKEIRYGD 221 (261)
T ss_dssp --TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HHH----------------HC---CEEEEEEEEEE-S--BTT-
T ss_pred ChhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcchh----------------hc---cCCcEEEEEEEccccCCCC
Confidence 3466788999999999999999999999999988643311 11 2468899999999999999
Q ss_pred EEEEEEEEeee-CCeEEEEEEEEEECCCCcEEEEEEEEE
Q 019026 159 VVEIETWCQSE-GRIGTRRDWILKDYATGEVIGRATSKW 196 (347)
Q Consensus 159 ~V~I~Twv~~~-~r~~~~R~f~I~d~~~Gevia~a~S~w 196 (347)
.|.+.+.+... ..-.......|.+ ++|+++++|.+.|
T Consensus 222 ~i~~~~~~~~~~~~~~~~~~h~i~~-~~g~~~~~~~~~W 259 (261)
T PF01643_consen 222 TITSYTEVEKDEEEDGLSTLHEIRN-EDGEEVARARTEW 259 (261)
T ss_dssp EEEEEEEEEEECCTTEEEEEEEEEC-T-TCEEEEEEEEE
T ss_pred EEEEEEEEcccccCCceEEEEEEEc-CCCceEEEEEEEE
Confidence 99999886543 2222234567887 6699999999999
No 22
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.51 E-value=2.2e-07 Score=95.91 Aligned_cols=78 Identities=10% Similarity=0.037 Sum_probs=64.8
Q ss_pred ccceecccCCCCCCCccchhHHHHHHHHHhhH---------hHhh---ccceEEEEEE-eecCCCCCEEEEEEEeccccc
Q 019026 251 RLGLIPRRADLDMNQHVNNVTYIGWLLEVSTM---------RMAT---KLFLAFLFLP-NRNCYISTTLKFFLSNSCLCM 317 (347)
Q Consensus 251 ~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~---------e~~~---~~~l~~i~I~-~~E~~~gd~v~v~t~~~~~c~ 317 (347)
..+++|++.|+|.||||||++|+.|++++... +.+. ...+.+++|+ ++|+++||.|++.|++.
T Consensus 347 ~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~~G~~~~~~~~~~~~vvv~~~i~y~rp~~~gD~v~I~t~v~---- 422 (495)
T PRK07531 347 LVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRLIGVDAAYVAAGHSYYTVETHIRHLGEAKAGQALHVETQLL---- 422 (495)
T ss_pred EEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHHcCCCHHHHhcCCcEEEEEEEEEEcccCCCCCEEEEEEEEE----
Confidence 45789999999999999999999999988421 1111 2368999999 99999999999999998
Q ss_pred cccccccccCCCCCCcceEEEeeecC
Q 019026 318 TEHASRCHRHPRTPDYHLRLQTRMPT 343 (347)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (347)
..++.++++..+|..
T Consensus 423 -----------~~~~~s~~~~~~i~~ 437 (495)
T PRK07531 423 -----------SGDEKRLHLFHTLYD 437 (495)
T ss_pred -----------ecCCcEEEEEEEEEC
Confidence 778888888877753
No 23
>PRK10694 acyl-CoA esterase; Provisional
Probab=98.34 E-value=2.8e-05 Score=66.83 Aligned_cols=112 Identities=14% Similarity=0.066 Sum_probs=89.7
Q ss_pred EEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEe-EEEEeecCCCCCEEEE
Q 019026 84 YKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARM-HIEIYKYPAWSDVVEI 162 (347)
Q Consensus 84 y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~-~Iei~r~p~~gD~V~I 162 (347)
....+.|...|++..|.+.=..++.|+.+++...+.... +--++.+.+ .++|.+|.+.||.|++
T Consensus 12 ~~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~~---------------~~~~vtv~vd~i~F~~Pv~~Gd~l~~ 76 (133)
T PRK10694 12 LVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIA---------------HGRVVTVRVEGMTFLRPVAVGDVVCC 76 (133)
T ss_pred eEEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHHc---------------CCceEEEEECceEECCCcccCcEEEE
Confidence 345568999999999999999999999998877665422 223677787 6799999999999999
Q ss_pred EEEEeeeCCeEEEEEEEEEEC---C--CC--cEEEEEEEEEEEEeCCCCceecCCH
Q 019026 163 ETWCQSEGRIGTRRDWILKDY---A--TG--EVIGRATSKWVMMNQDTRRLQKVSD 211 (347)
Q Consensus 163 ~Twv~~~~r~~~~R~f~I~d~---~--~G--evia~a~S~wVlvDl~trRpvrlp~ 211 (347)
++++...++.++....+++.. . .| ..++.+..++|.+| +.+||.++|+
T Consensus 77 ~a~V~~~g~sS~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd-~~g~p~~vp~ 131 (133)
T PRK10694 77 YARCVKTGTTSISINIEVWVKKVASEPIGQRYKATEALFTYVAVD-PEGKPRALPV 131 (133)
T ss_pred EEEEEEccCceEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEEC-CCCCEEeCCC
Confidence 999999999999877777731 1 12 34668888899998 5789998875
No 24
>PLN02370 acyl-ACP thioesterase
Probab=98.18 E-value=1.1e-05 Score=81.69 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=68.5
Q ss_pred EEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEE
Q 019026 85 KEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 85 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~T 164 (347)
...++|||+|+|.||||||..|++|+.|+.-. + +.+ ...+..+.|+|.+...+||.|.+.+
T Consensus 303 ~~~~~VRysDLD~NgHVNNvkYi~Wild~lP~---------e-------~l~---~~~l~~i~I~Y~kE~~~gd~V~s~~ 363 (419)
T PLN02370 303 RKGLTPRWSDLDVNQHVNNVKYIGWILESAPP---------P-------IME---SHELAAITLEYRRECGRDSVLQSLT 363 (419)
T ss_pred eeeeeecHHHCcccCccccHHHHHHHHhhCch---------h-------hhh---cceEEEEEEEEcccCCCCCEEEEEE
Confidence 34599999999999999999999999885321 1 111 1357889999999999999999887
Q ss_pred EEee--eCC------eEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 165 WCQS--EGR------IGTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 165 wv~~--~~r------~~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
...+ .+. ..+. ..+.. ++|++++++.+.|---
T Consensus 364 ~~~~~~~~~~~~~~~~~~~--h~~~~-~dG~e~a~a~t~Wr~~ 403 (419)
T PLN02370 364 AVSGTGIGNLGTAGDVECQ--HLLRL-EDGAEIVRGRTEWRPK 403 (419)
T ss_pred eecccccccccCCCcceEE--EEEEc-CCCeEEEEEEEEEEEC
Confidence 7532 111 1221 23344 7999999999999643
No 25
>PLN02647 acyl-CoA thioesterase
Probab=97.91 E-value=0.0057 Score=62.51 Aligned_cols=213 Identities=15% Similarity=0.052 Sum_probs=135.6
Q ss_pred EeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEe-EEEEeecCCCCCEEEEEEEEe
Q 019026 89 IVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARM-HIEIYKYPAWSDVVEIETWCQ 167 (347)
Q Consensus 89 ~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~-~Iei~r~p~~gD~V~I~Twv~ 167 (347)
.++..+.+..|.|.-..+|.+|.++|..-+....-..++ ....+..|.+.. +|+|++|+..||.|.|...++
T Consensus 99 ~l~~~y~N~~G~l~gG~LLe~mD~~A~~~A~rh~~~~~~-------~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~Vt 171 (437)
T PLN02647 99 ILREQYRNPWNEVRIGKLLEDLDALAGTISVKHCSDDDS-------TTRPLLLVTASVDKIVLKKPIRVDVDLKIVGAVT 171 (437)
T ss_pred hhchhhcCCCCcEeHhHHHHHHHHHHHHHHHHHhCCCcc-------cCCcceEEEEEECcEEEcCCCcCCcEEEEEEEEE
Confidence 566777999999999999999999987766554322111 122334555554 589999999999999999999
Q ss_pred eeCCeEEEEEEEEEECC-------CCcEEEEEEEEEEEEeCCCCceecCCHHH------HHHHhhcCcc-ccc-------
Q 019026 168 SEGRIGTRRDWILKDYA-------TGEVIGRATSKWVMMNQDTRRLQKVSDDV------REEYLVFCPR-ELR------- 226 (347)
Q Consensus 168 ~~~r~~~~R~f~I~d~~-------~Gevia~a~S~wVlvDl~trRpvrlp~el------~e~~~~~~p~-~~~------- 226 (347)
..|+.++...-.++. + ...++++|..++|.+|-+++||.++|+-. +..|.....+ +.+
T Consensus 172 ~vGrSSMEV~v~V~~-~~~~~~~~~~~~~~~a~FtfVA~D~~~gkp~pVp~l~pete~Ek~~~e~a~~R~~~Rk~~r~~~ 250 (437)
T PLN02647 172 WVGRSSMEIQLEVIQ-PTKDESNTSDSVALTANFTFVARDSKTGKSAPVNRLSPETEEEKLLFEEAEARNKLRKKKRGEQ 250 (437)
T ss_pred EecCCeEEEEEEEEE-ccccCCCCcEEEEEEEEEEEEEEcCCCCCeeeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999987667764 2 22468899999999998789998875421 2222110000 000
Q ss_pred -cc-CCccCc---------cccccCCCCCCcc------cccccceecccCCCCCCCccchhHHHHHHHHHhhHh--Hhhc
Q 019026 227 -LA-FPEENS---------SSSRKISKLEDPA------QYSRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMR--MATK 287 (347)
Q Consensus 227 -l~-~p~~~~---------~~~~ki~k~~~p~------~~~~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e--~~~~ 287 (347)
.. .|++.. ..+...|.+.++. ......+.+...|...+|.+.=..-+.|+.++...- .+..
T Consensus 251 ~~~~~~~e~~~l~~l~~~~~~~~~~p~l~~~~~v~m~dT~~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r~a~ 330 (437)
T PLN02647 251 KREFENGEAERLEALLAEGRVFCDMPALADRNSILIRDTRLENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAFAG 330 (437)
T ss_pred cccCCchHHHHHHHHHHhccccccCcccCCccceeccccceEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHHHHcC
Confidence 00 011000 0000011111111 011234568899999999999999999998874321 2223
Q ss_pred cceEEEE---EE-eecCCCCCEEEEE
Q 019026 288 LFLAFLF---LP-NRNCYISTTLKFF 309 (347)
Q Consensus 288 ~~l~~i~---I~-~~E~~~gd~v~v~ 309 (347)
..+..+. |. .+++..||.|.+.
T Consensus 331 ~~~vt~svd~v~F~~PV~vGdil~l~ 356 (437)
T PLN02647 331 LRPYFLEVDHVDFLRPVDVGDFLRFK 356 (437)
T ss_pred CceEEEEecceEecCccccCcEEEEE
Confidence 4455554 45 9999999999864
No 26
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=97.77 E-value=0.0013 Score=58.21 Aligned_cols=112 Identities=14% Similarity=0.034 Sum_probs=89.4
Q ss_pred EEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEE-eEEEEeecCCCCCEEEEEE
Q 019026 86 EKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTAR-MHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 86 ~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r-~~Iei~r~p~~gD~V~I~T 164 (347)
....|-..|++++|.+.=..+|.||.+++.-.+....-+ . -|.+. -++.|.+|.+.||.|.+..
T Consensus 16 ~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~a~~--------------~-vVTasvd~v~F~~Pv~vGd~v~~~a 80 (157)
T COG1607 16 LRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRHAGG--------------R-VVTASVDSVDFKKPVRVGDIVCLYA 80 (157)
T ss_pred EEEEecCCccCcccccccHHHHHHHHHHHHHHHHHHhCC--------------e-EEEEEeceEEEccccccCcEEEEEE
Confidence 567899999999999999999999999998776553322 1 23333 4589999999999999999
Q ss_pred EEeeeCCeEEEEEEEEEE--C--CCCcEEEEEEEEEEEEeCCCCceecCCHHH
Q 019026 165 WCQSEGRIGTRRDWILKD--Y--ATGEVIGRATSKWVMMNQDTRRLQKVSDDV 213 (347)
Q Consensus 165 wv~~~~r~~~~R~f~I~d--~--~~Gevia~a~S~wVlvDl~trRpvrlp~el 213 (347)
|+...|+.++...-+++. . ........+..++|-+|-+ +||.++|++.
T Consensus 81 ~v~~~GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~~-gkP~~vp~~~ 132 (157)
T COG1607 81 RVVYTGRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVDED-GKPTPVPREE 132 (157)
T ss_pred EEeecCcccEEEEEEEEEecccCCcceEeeeEEEEEEEECCC-CCcccCCccC
Confidence 999999999988777764 1 2234566788888999966 9999998753
No 27
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=97.75 E-value=0.00013 Score=67.84 Aligned_cols=91 Identities=14% Similarity=0.016 Sum_probs=70.4
Q ss_pred CCccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCE
Q 019026 80 DGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDV 159 (347)
Q Consensus 80 ~~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~ 159 (347)
...++...|.||++|+|.+|||||+.|.+|+.|.-..++..+ -...++.++|.++...||+
T Consensus 149 ~e~s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~~~-------------------~~p~r~~l~y~keva~G~~ 209 (250)
T COG3884 149 LEASEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFLKL-------------------YGPLRLTLEYVKEVAPGEK 209 (250)
T ss_pred ccccccccceeEEEeeccccccccceehHHHHHHHhhhhHhh-------------------cccceeEEEEEcccCCCCe
Confidence 345667889999999999999999999999999866544332 1234688999999999999
Q ss_pred EEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEE
Q 019026 160 VEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKW 196 (347)
Q Consensus 160 V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~w 196 (347)
|+|.+...+.+..-. +. .+|.+.+.+..+|
T Consensus 210 iti~~e~~~~~s~~~------f~-~d~~v~~lt~i~~ 239 (250)
T COG3884 210 ITIVYEVHPLESKHQ------FT-SDGQVNALTYIVG 239 (250)
T ss_pred EEEEEEEcccCceee------ec-CCcceEEEEEEEe
Confidence 999998887654321 22 4787777777766
No 28
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=97.67 E-value=0.0019 Score=53.44 Aligned_cols=98 Identities=10% Similarity=-0.057 Sum_probs=80.2
Q ss_pred EEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEE
Q 019026 85 KEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 85 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~T 164 (347)
...+.+....++..|.++=..++.+++.++...... .. ..+...+.+.++++|.+|+.-| .|.++.
T Consensus 19 ~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~-~~------------~~~~~~vt~~l~i~f~~p~~~g-~l~a~a 84 (117)
T TIGR00369 19 EATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYL-CN------------SGGQAVVGLELNANHLRPAREG-KVRAIA 84 (117)
T ss_pred EEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHHh-hc------------CCCceEEEEEEEeeeccccCCC-EEEEEE
Confidence 566788888999999999999999998777332211 11 1234567889999999999999 999999
Q ss_pred EEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 165 WCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 165 wv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
++.+.++....-+-+++| ++|++++.|+.++.
T Consensus 85 ~v~~~gr~~~~~~~~i~~-~~g~~va~~~~t~~ 116 (117)
T TIGR00369 85 QVVHLGRQTGVAEIEIVD-EQGRLCALSRGTTA 116 (117)
T ss_pred EEEecCceEEEEEEEEEC-CCCCEEEEEEEEEc
Confidence 999999988888889999 89999999998874
No 29
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=97.65 E-value=0.00032 Score=51.49 Aligned_cols=61 Identities=16% Similarity=-0.022 Sum_probs=52.5
Q ss_pred ceecccCCCCCCCccchhHHHHHHHHHhhHhHhh------ccceEEEEEE-eecCCCCCEEEEEEEec
Q 019026 253 GLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMAT------KLFLAFLFLP-NRNCYISTTLKFFLSNS 313 (347)
Q Consensus 253 ~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~~------~~~l~~i~I~-~~E~~~gd~v~v~t~~~ 313 (347)
.+.+++.|+|.++|+|+..|+.|+..+...-+.. ...+..+.++ .+++++||.|.+...+.
T Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~ 71 (100)
T cd03440 4 RLTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGGRGLGAVTLSLDVRFLRPVRPGDTLTVEAEVV 71 (100)
T ss_pred EEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHHhccCCCeEEEEEEEeEEecCCCCCCEEEEEEEEE
Confidence 5678999999999999999999999997554432 3478899999 99999999999998876
No 30
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=97.60 E-value=0.00033 Score=57.37 Aligned_cols=76 Identities=7% Similarity=0.051 Sum_probs=57.7
Q ss_pred ccceecccCCCCCCCccchhHHHHHHHHHhhHhHh--hc--cceEEE-EEE-eecCCCCCEEEEEEEecccccccccccc
Q 019026 251 RLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMA--TK--LFLAFL-FLP-NRNCYISTTLKFFLSNSCLCMTEHASRC 324 (347)
Q Consensus 251 ~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~--~~--~~l~~i-~I~-~~E~~~gd~v~v~t~~~~~c~~~~~~~~ 324 (347)
...+.|++.|+|..||||+..|+.|+.++.-.-.. .. .....+ +++ ++++..||.|.+...+.
T Consensus 9 ~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~f~~p~~~gd~l~i~~~v~----------- 77 (123)
T cd03442 9 STRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAYRHAGGRVVTASVDRIDFLKPVRVGDVVELSARVV----------- 77 (123)
T ss_pred EEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHHHHhCCcEEEEEECceEEcCccccCcEEEEEEEEE-----------
Confidence 45789999999999999999999999988533211 11 234556 689 99999999999988877
Q ss_pred ccCCCCCCcceEEEeee
Q 019026 325 HRHPRTPDYHLRLQTRM 341 (347)
Q Consensus 325 ~~~~~~~~~~~~~~~~~ 341 (347)
..++.++.++.++
T Consensus 78 ----~~g~~~~~~~~~i 90 (123)
T cd03442 78 ----YTGRTSMEVGVEV 90 (123)
T ss_pred ----EecCCeEEEEEEE
Confidence 5566666655554
No 31
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.60 E-value=0.0029 Score=52.20 Aligned_cols=97 Identities=16% Similarity=0.039 Sum_probs=78.8
Q ss_pred EEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEE
Q 019026 85 KEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 85 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~T 164 (347)
...+.++...++..|.++=..++.++..+....+... +..-+....+++|.+|...||.|.++.
T Consensus 17 ~~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~~~~----------------~~~~~t~~~~i~f~rp~~~G~~l~~~a 80 (114)
T TIGR02286 17 RVAMTVRADMLNGHGTAHGGFLFSLADSAFAYACNSY----------------GDAAVAAQCTIDFLRPGRAGERLEAEA 80 (114)
T ss_pred EEEEECCHHHcCcCCCchHHHHHHHHHHHHHHHhcCC----------------CCceEEEEEEEEEecCCCCCCEEEEEE
Confidence 3467888899999999999999999998864332110 111256788999999999999999999
Q ss_pred EEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019026 165 WCQSEGRIGTRRDWILKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 165 wv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVl 198 (347)
++.+.++.....+-++++ ++|++++.++.+|-.
T Consensus 81 ~v~~~g~~~~~~~~~i~~-~~~~~va~~~~t~~~ 113 (114)
T TIGR02286 81 VEVSRGGRTGTYDVEVVN-QEGELVALFRGTSRR 113 (114)
T ss_pred EEEEeCCcEEEEEEEEEc-CCCCEEEEEEEEEEE
Confidence 999998877777888998 899999999999864
No 32
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=97.25 E-value=0.0012 Score=49.78 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=50.7
Q ss_pred CCccchhHHHHHHHHHhhHhHhh------ccceEEEEEE-eecCCCCCEEEEEEEeccccccccccccccCCCCCCcceE
Q 019026 264 NQHVNNVTYIGWLLEVSTMRMAT------KLFLAFLFLP-NRNCYISTTLKFFLSNSCLCMTEHASRCHRHPRTPDYHLR 336 (347)
Q Consensus 264 n~HVNN~~Y~~w~~d~lp~e~~~------~~~l~~i~I~-~~E~~~gd~v~v~t~~~~~c~~~~~~~~~~~~~~~~~~~~ 336 (347)
||||||..|+.|++++...-+.. ...+.++.|+ .++++.||.|.+...+. +.|+.++.
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~---------------~~g~~~~~ 65 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRSHGGDGRGVVTVELSIDFLRPVRPGDTLRVEARVV---------------RVGRKSFT 65 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHSSTEEEEEEEEEEEESS-BBTTSEEEEEEEEE---------------EEESSEEE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHHhccCCcceEEEEEEEEEccccCCCeEEEEEEEEE---------------EECCEEEE
Confidence 79999999999999986432221 2468889999 99999999999999988 77777777
Q ss_pred EEeeec
Q 019026 337 LQTRMP 342 (347)
Q Consensus 337 ~~~~~~ 342 (347)
+.-.+-
T Consensus 66 ~~~~v~ 71 (79)
T PF03061_consen 66 VEVEVY 71 (79)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 766553
No 33
>PRK10293 acyl-CoA esterase; Provisional
Probab=97.10 E-value=0.023 Score=48.94 Aligned_cols=100 Identities=8% Similarity=-0.100 Sum_probs=80.9
Q ss_pred EEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEE
Q 019026 85 KEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 85 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~T 164 (347)
+..+.|+...+.+.|.++=..++.+++.++....... ...+...+-..++++|.+|..-| .|+.+-
T Consensus 37 ~~~~~v~~~~~n~~G~lHGGv~~tLaD~a~~~a~~~~-------------~~~~~~~vTiel~infl~p~~~g-~l~a~a 102 (136)
T PRK10293 37 EATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLC-------------TEGEQKVVGLEINANHVRSAREG-RVRGVC 102 (136)
T ss_pred EEEEEcCHHHcCCcCcccHHHHHHHHHHHHHHHHHhc-------------ccCCceEEEEEEEeEEecccCCc-eEEEEE
Confidence 4556788888999999999999999977654332221 12245678899999999999877 699999
Q ss_pred EEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 165 WCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 165 wv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
++.+.+|.....+-+++| ++|++++.++.+|.++
T Consensus 103 ~vv~~Gr~~~~~~~~v~d-~~g~l~A~~~~t~~i~ 136 (136)
T PRK10293 103 KPLHLGSRHQVWQIEIFD-EKGRLCCSSRLTTAIL 136 (136)
T ss_pred EEEecCCCEEEEEEEEEe-CCCCEEEEEEEEEEEC
Confidence 999999888888899999 8999999999999764
No 34
>COG5496 Predicted thioesterase [General function prediction only]
Probab=96.96 E-value=0.044 Score=46.75 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=85.4
Q ss_pred CCCccEEEEEEeeecCCCCC-------CccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEe
Q 019026 79 EDGLSYKEKFIVRCYEVGIN-------KTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIY 151 (347)
Q Consensus 79 e~~~~y~~~~~Vr~~D~D~~-------G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~ 151 (347)
++++.|+.++.|+.-+++.- ..+--+.++.||++|+.+.++. . .+.|.+-|-+...++-.
T Consensus 2 ~~g~~~e~~~lv~dn~t~~~~~~~~~~~VlATp~mi~~~E~a~~el~~~-~------------Ld~g~ttVG~ev~vrHl 68 (130)
T COG5496 2 MDGLTLEGEFLVRDNHTVPPAEGSGMLNVLATPAMIGFMENASYELLQP-Y------------LDNGETTVGTEVLVRHL 68 (130)
T ss_pred CCceeeEEEEEecccccCchhHhCCccceeehHHHHHHHHHHHHHHHHh-h------------CcCCcceeeEEEEeeec
Confidence 56889999999999988831 2333456788888888877654 2 24577889999999999
Q ss_pred ecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCC
Q 019026 152 KYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQDT 203 (347)
Q Consensus 152 r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~t 203 (347)
.+..-|..|+|.+.+.++++-....+-+.. ++|+.+++|..+-+.+|.++
T Consensus 69 a~~~~G~~V~i~~~l~~v~Gr~v~f~i~a~--~~~~~Ig~g~h~R~iv~~~k 118 (130)
T COG5496 69 AATPPGLTVTIGARLEKVEGRKVKFRIIAM--EGGDKIGEGTHTRVIVPREK 118 (130)
T ss_pred cCCCCCCeEEEEEEEEEEeccEEEEEEEEe--eCCcEEeeeEEEEEEecHHH
Confidence 999999999999999999655554333333 68999999999998888653
No 35
>PRK11688 hypothetical protein; Provisional
Probab=96.87 E-value=0.04 Score=48.10 Aligned_cols=111 Identities=13% Similarity=0.100 Sum_probs=78.3
Q ss_pred EEEEEeeecCCC--CCCccCHHHHHHHHHHHHHHHHHHcCC-CCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEE
Q 019026 85 KEKFIVRCYEVG--INKTATVETIANLLQEVGCNHAQSVGF-STDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVE 161 (347)
Q Consensus 85 ~~~~~Vr~~D~D--~~G~v~~~~yl~~~qeaa~~h~~~lG~-~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~ 161 (347)
...+.++-..++ ..|.++=..++.+++.+....+...+. ...... ..+........+.+.++++|.+|.. |+.|.
T Consensus 40 ~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~~~~~~~~~~-~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l~ 117 (154)
T PRK11688 40 ELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGGILARHEDIS-EEELRQRLSRLGTIDLRVDYLRPGR-GERFT 117 (154)
T ss_pred EEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhhccccccccc-ccccccccccceEEEEEEEeeccCC-CCeEE
Confidence 345667777775 579999999999998777654433211 110000 0000011223467899999999996 99999
Q ss_pred EEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019026 162 IETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 162 I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVl 198 (347)
++.++.+.++..+..+-+|+| ++|+++|+++.+|..
T Consensus 118 a~a~v~~~g~r~~~~~~~i~~-~~g~lvA~a~~t~~v 153 (154)
T PRK11688 118 ATSSVLRAGNKVAVARMELHN-EQGVHIASGTATYLV 153 (154)
T ss_pred EEEEEEEccCCEEEEEEEEEC-CCCCEEEEEEEEEEe
Confidence 999999998877777889998 889999999999864
No 36
>PRK10254 thioesterase; Provisional
Probab=96.85 E-value=0.079 Score=45.80 Aligned_cols=100 Identities=10% Similarity=-0.056 Sum_probs=81.4
Q ss_pred EEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEE
Q 019026 85 KEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 85 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~T 164 (347)
+..+.|+...+.+.|.++=..++.+++.++....... ...+...+-..++++|.+|..-| .|..+.
T Consensus 37 ~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~~~-------------~~~g~~~vTiel~in~Lrp~~~g-~l~a~a 102 (137)
T PRK10254 37 EAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFLM-------------TRDGQCVVGTELNATHHRPVSEG-KVRGVC 102 (137)
T ss_pred EEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHHhh-------------CCCCCeEEEEEEEeEEeccCcCC-eEEEEE
Confidence 3456677778899999999999999988765444221 12356789999999999999866 799999
Q ss_pred EEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 165 WCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 165 wv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
.+.+.+|.....+-+++| ++|++++.++.+..++
T Consensus 103 ~vi~~Gr~~~v~~~~v~d-~~g~l~a~~~~t~~i~ 136 (137)
T PRK10254 103 QPLHLGRQNQSWEIVVFD-EQGRRCCTCRLGTAVL 136 (137)
T ss_pred EEEecCcCEEEEEEEEEc-CCCCEEEEEEEEEEEe
Confidence 999999988888899999 8999999999887664
No 37
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.36 E-value=0.18 Score=43.16 Aligned_cols=103 Identities=17% Similarity=0.105 Sum_probs=83.6
Q ss_pred EEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEE
Q 019026 85 KEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 85 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~T 164 (347)
+..+.+......+.|.++=..++.+++.++........-. ...-+-+.++++|.||.+-|+ |+.+-
T Consensus 37 ~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~~~~-------------~~~~~ti~l~i~flr~~~~g~-v~a~a 102 (141)
T COG2050 37 EATLPVDPELLNPGGILHGGVIAALADSAAGLAANSLLGV-------------VALAVTLELNINFLRPVKEGD-VTAEA 102 (141)
T ss_pred EEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhhccCc-------------cceeEEEEEEehhccCCCCCe-EEEEE
Confidence 4456677777778999999999999988887665543221 112288899999999999999 99999
Q ss_pred EEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeC
Q 019026 165 WCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQ 201 (347)
Q Consensus 165 wv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl 201 (347)
.+.+.++.-...+.++++.+.|++++.++.+|..++.
T Consensus 103 ~v~~~G~~~~v~~i~v~~~~~~~lva~~~~t~~v~~~ 139 (141)
T COG2050 103 RVLHLGRRVAVVEIEVKNDEGGRLVAKGTGTYAVLRK 139 (141)
T ss_pred EEEeeCCEEEEEEEEEEECCCCeEEEEEEEEEEEecC
Confidence 9999999988888999963666999999999998874
No 38
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=96.22 E-value=0.088 Score=46.08 Aligned_cols=100 Identities=15% Similarity=0.076 Sum_probs=83.0
Q ss_pred EEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEE
Q 019026 85 KEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIET 164 (347)
Q Consensus 85 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~T 164 (347)
.-+++|....++.+|.++-...+.+.+..+..-+-. .+....-|-+.+++.|..+...||.|.|+.
T Consensus 40 ~ce~kV~~~~~N~~k~LHGG~tAtLvD~i~s~~~~~--------------~~~~~~gvsvdLsvsyL~~AklGe~l~i~a 105 (148)
T KOG3328|consen 40 SCELKVTPDHLNRFKTLHGGATATLVDLITSAALLM--------------TSGFKPGVSVDLSVSYLSSAKLGEELEIEA 105 (148)
T ss_pred EEEEEeCHHHcCccccccccchhhHHHHHhhHHHHh--------------ccCCCCceEEEEEhhhccccCCCCeEEEEE
Confidence 567899999999999999999999988877753221 112233578899999999999999999999
Q ss_pred EEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019026 165 WCQSEGRIGTRRDWILKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 165 wv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVl 198 (347)
.+-+.||.....+-+++.+.+|++++.++-+-.+
T Consensus 106 ~~vr~Gk~la~t~v~l~~K~t~kiia~grhtk~~ 139 (148)
T KOG3328|consen 106 TVVRVGKTLAFTDVELRRKSTGKIIAKGRHTKYF 139 (148)
T ss_pred EEeecCceEEEEEEEEEEcCCCeEEEecceEEEe
Confidence 9999999999889999997889999988765544
No 39
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=96.17 E-value=0.071 Score=43.92 Aligned_cols=57 Identities=9% Similarity=-0.005 Sum_probs=46.7
Q ss_pred ceEEEEEeEEEEeecCCCCCEEEEEEEEeeeCC--eEEEEEEEEEECCCCcEEEEEEEEE
Q 019026 139 LIWVTARMHIEIYKYPAWSDVVEIETWCQSEGR--IGTRRDWILKDYATGEVIGRATSKW 196 (347)
Q Consensus 139 l~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r--~~~~R~f~I~d~~~Gevia~a~S~w 196 (347)
-+.+....+++|.+|...||+|+++.++.+... ........+++ ++|+++++|..+.
T Consensus 68 ~~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~-~~g~~v~~g~~~~ 126 (128)
T cd03449 68 PGTIYLSQSLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTN-QNGEVVIEGEAVV 126 (128)
T ss_pred ceEEEEEEEEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEe-CCCCEEEEEEEEE
Confidence 356777899999999999999999999988743 45556677888 8899999988654
No 40
>PLN02322 acyl-CoA thioesterase
Probab=95.01 E-value=1.5 Score=38.71 Aligned_cols=101 Identities=12% Similarity=-0.040 Sum_probs=77.4
Q ss_pred EEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEE
Q 019026 86 EKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETW 165 (347)
Q Consensus 86 ~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Tw 165 (347)
....|+...+.+.|.++=..++.+++.+.. ++.... ..+...+-+.++++|.+|...|+.|..+-+
T Consensus 30 ~~m~v~~~~~N~~G~vHGGv~atLaDta~g-~A~~~~-------------~~~~~~vTiel~infLrpa~~G~~L~Aea~ 95 (154)
T PLN02322 30 GRLPVSPMCCQPFKVLHGGVSALIAESLAS-LGAHMA-------------SGFKRVAGIQLSINHLKSADLGDLVFAEAT 95 (154)
T ss_pred EEEECCHHHcCCCCCccHHHHHHHHHHHHH-HHHhhc-------------cCCCceEEEEEEEEEeccCCCCCEEEEEEE
Confidence 445677777999999999999999976544 222111 112346889999999999999999999999
Q ss_pred EeeeCCeEEEEEEEEEEC----C-CCcEEEEEEEEEEEEe
Q 019026 166 CQSEGRIGTRRDWILKDY----A-TGEVIGRATSKWVMMN 200 (347)
Q Consensus 166 v~~~~r~~~~R~f~I~d~----~-~Gevia~a~S~wVlvD 200 (347)
+.+.++.....+-+|++. + +|.+++.++.+..++.
T Consensus 96 vv~~Gr~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~~ 135 (154)
T PLN02322 96 PVSTGKTIQVWEVKLWKTTDKDKANKILISSSRVTLICNL 135 (154)
T ss_pred EEecCCCEEEEEEEEEECCCCcccCCeEEEEEEEEEEEcc
Confidence 999998888888899982 1 2688888888776543
No 41
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=94.79 E-value=0.57 Score=39.85 Aligned_cols=99 Identities=17% Similarity=0.061 Sum_probs=66.2
Q ss_pred cEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEE
Q 019026 83 SYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEI 162 (347)
Q Consensus 83 ~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I 162 (347)
...-.+..++.--+..|.++-.+++.+.+-+....+.. .+ ..++.|++..++++|.+|.. ..|+.
T Consensus 30 ~~~v~l~~~~~~~N~~gt~h~gAl~~laE~~~g~~~~~-~l------------~~~~~~~~k~~~i~f~kpa~--g~v~a 94 (132)
T PF14539_consen 30 RVVVRLPLRPRNRNHVGTIHAGALFTLAEPAYGLLLMS-NL------------GDKYRVWDKSAEIDFLKPAR--GDVTA 94 (132)
T ss_dssp EEEEEE-S-CCGB-TTSSB-HHHHHHHHHCHHHHHHHH-HS-------------TTEEEEEEEEEEEE-S-----S-EEE
T ss_pred EEEEEEcCCccccCcCcchHHHHHHHHHHHHHHHHHHH-hC------------CCcEEEEEEeeEEEEEeccC--CcEEE
Confidence 34556677788899999999999999999887766543 11 12677889999999999965 34555
Q ss_pred EEEEee--eC-CeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 163 ETWCQS--EG-RIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 163 ~Twv~~--~~-r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
+..++. ++ +........++| ++|++++++..+|-
T Consensus 95 ~~~~~~e~~~~~~~~~~~v~i~D-~~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 95 TAELTEEQIGERGELTVPVEITD-ADGEVVAEATITWY 131 (132)
T ss_dssp EEE-TCCHCCHEEEEEEEEEEEE-TTC-EEEEEEEEEE
T ss_pred EEEcCHHHhCCCcEEEEEEEEEE-CCCCEEEEEEEEEE
Confidence 544444 33 556666778999 99999999999995
No 42
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=94.59 E-value=0.28 Score=48.78 Aligned_cols=105 Identities=20% Similarity=0.158 Sum_probs=89.1
Q ss_pred ccCCCCCCccEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeec
Q 019026 74 LGTLTEDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKY 153 (347)
Q Consensus 74 ~~~~~e~~~~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~ 153 (347)
.-.|.+.+..|...++|...-++..|.+.+..+..++.++....+.... +--.++-.+.+-|.+|
T Consensus 323 ~~~l~e~~~~~~~t~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~k~~---------------~~niiIE~i~iyflk~ 387 (432)
T COG4109 323 ANNLSEKGDEYGVTVEVEPQMINSLGTISNGVFTELLTEVVQRVLRKKK---------------KRNIIIENITIYFLKP 387 (432)
T ss_pred HhhhhhhccccceEEEechhhccccccchHHHHHHHHHHHHHHHHHHhc---------------CCceEEEeeeeeeecc
Confidence 4457777778888899999999999999999999999999887765522 2235778899999999
Q ss_pred CCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEE
Q 019026 154 PAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSK 195 (347)
Q Consensus 154 p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~ 195 (347)
....+.|+|...+-+.+|.+...+++|+. +|.+++.|-..
T Consensus 388 vqid~~l~I~prIl~~gR~~a~idvei~~--~~~ivaKAiv~ 427 (432)
T COG4109 388 VQIDSVLEIYPRILEEGRKFAKIDVEIYH--DGQIVAKAIVT 427 (432)
T ss_pred eecccEEEEeeeeeccccccceeEEEEee--Ccchhhhheee
Confidence 99999999999999999999999999996 78778776544
No 43
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=94.45 E-value=0.31 Score=38.97 Aligned_cols=76 Identities=11% Similarity=-0.093 Sum_probs=59.8
Q ss_pred ccceecccCCCCCCCccchhHHHHHHHHHhhHhHh------hccceEEEEEE-eecCCCCCEEEEEEEeccccccccccc
Q 019026 251 RLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRMA------TKLFLAFLFLP-NRNCYISTTLKFFLSNSCLCMTEHASR 323 (347)
Q Consensus 251 ~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~~------~~~~l~~i~I~-~~E~~~gd~v~v~t~~~~~c~~~~~~~ 323 (347)
...+.+...+.|..|+||+..|..|+..+...-.. ....+.+++++ .+++.. +.|.+...+.
T Consensus 15 ~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~-~~v~~~~~v~---------- 83 (113)
T cd03443 15 VLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALSALPPGALAVTVDLNVNYLRPARG-GDLTARARVV---------- 83 (113)
T ss_pred EEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEEeEEcCCCC-CeEEEEEEEE----------
Confidence 45788888999999999999999999988643211 12367889999 999999 9999988877
Q ss_pred cccCCCCCCcceEEEeeec
Q 019026 324 CHRHPRTPDYHLRLQTRMP 342 (347)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~ 342 (347)
+.++..+.++-.+.
T Consensus 84 -----~~g~~~~~~~~~~~ 97 (113)
T cd03443 84 -----KLGRRLAVVEVEVT 97 (113)
T ss_pred -----ecCceEEEEEEEEE
Confidence 56776676666654
No 44
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=94.35 E-value=0.6 Score=41.55 Aligned_cols=64 Identities=13% Similarity=-0.047 Sum_probs=48.9
Q ss_pred EEEEeEEEEeecCCCCCEEEEEEEEeeeC----CeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCce
Q 019026 142 VTARMHIEIYKYPAWSDVVEIETWCQSEG----RIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRL 206 (347)
Q Consensus 142 VV~r~~Iei~r~p~~gD~V~I~Twv~~~~----r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRp 206 (347)
+-...+++|.+|...||+|+++..+.+.. +-......++.| ++|++++++..+++.-+-.+...
T Consensus 85 v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~N-Q~Ge~V~~~~~~~~~~~~~~~~~ 152 (166)
T PRK13691 85 VQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTN-DDGELVMEAYTTLMGQQGDNSAS 152 (166)
T ss_pred eeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEC-CCCCEEEEEEEEEEEecCCCcee
Confidence 44557889999999999999999988762 234556678888 99999999998776666444333
No 45
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=94.29 E-value=0.38 Score=39.96 Aligned_cols=54 Identities=6% Similarity=-0.027 Sum_probs=43.6
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCe-EEEEEEEEEECCCCcEEEEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRI-GTRRDWILKDYATGEVIGRATSK 195 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~-~~~R~f~I~d~~~Gevia~a~S~ 195 (347)
..+.+++++|.+|...||+|+++.++.+.... ....+.++.| ++|++++++..+
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~n-q~G~~v~~g~a~ 121 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARN-SEGDHVMAGTAT 121 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEc-CCCCEEEeEEEE
Confidence 45567899999999999999999999876332 4556678888 999998888765
No 46
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=94.27 E-value=0.29 Score=38.33 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=51.4
Q ss_pred ceEEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 139 LIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 139 l~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
..-+...+++.|.+++..++.+..+.++...++.....+-++++ ++|++++.+.....
T Consensus 41 ~~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~-~~G~lva~~~~~~~ 98 (99)
T cd00556 41 SGFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQ-RDGKLVASATQSFL 98 (99)
T ss_pred CCeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEEC-CCCcEEEEEEEeEc
Confidence 34577889999999999999999999999999998889899998 78999999987654
No 47
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=94.26 E-value=1.8 Score=35.51 Aligned_cols=86 Identities=10% Similarity=0.004 Sum_probs=63.4
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEE
Q 019026 98 NKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRD 177 (347)
Q Consensus 98 ~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~ 177 (347)
++.+.-.-.++++-+++..++...+.... .....+..+.--+++|.++..-||+++++.++...+......+
T Consensus 41 ~p~lPg~~~iE~~aQ~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~ 112 (131)
T cd00493 41 DPVMPGVLGIEAMAQAAAALAGLLGLGKG--------NPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFD 112 (131)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcccccc--------cCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEE
Confidence 46677788889999988888765543211 1223344444468999999999999999999998765455566
Q ss_pred EEEEECCCCcEEEEEE
Q 019026 178 WILKDYATGEVIGRAT 193 (347)
Q Consensus 178 f~I~d~~~Gevia~a~ 193 (347)
..++. +|++++++.
T Consensus 113 ~~~~~--~g~~v~~~~ 126 (131)
T cd00493 113 GRAYV--DGKLVAEAE 126 (131)
T ss_pred EEEEE--CCEEEEEEE
Confidence 77876 699999888
No 48
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=94.25 E-value=2 Score=35.35 Aligned_cols=87 Identities=10% Similarity=-0.071 Sum_probs=59.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEE
Q 019026 100 TATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWI 179 (347)
Q Consensus 100 ~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~ 179 (347)
.+.-.-.++++-+++..+....+-. ...+.++.+.-.+++|.+++.-||.|++++++...+......+.+
T Consensus 44 i~Pg~l~iE~~aQ~~~~~~~~~~~~----------~~~~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~~~~~~~ 113 (131)
T cd01288 44 IMPGVLIIEALAQAAGILGLKSLED----------FEGKLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGIGKFKGK 113 (131)
T ss_pred cCCchHHHHHHHHHHHHHhhhcccc----------cCCcEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCEEEEEEE
Confidence 3344446667777766554322110 122345555558899999999999999999999876555555666
Q ss_pred EEECCCCcEEEEEEEEEEE
Q 019026 180 LKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 180 I~d~~~Gevia~a~S~wVl 198 (347)
++ .+|+++++|+.+.+.
T Consensus 114 ~~--~~g~~v~~~~~~~~~ 130 (131)
T cd01288 114 AY--VDGKLVAEAELMFAI 130 (131)
T ss_pred EE--ECCEEEEEEEEEEEE
Confidence 75 589999999887664
No 49
>PLN02647 acyl-CoA thioesterase
Probab=94.16 E-value=2 Score=44.16 Aligned_cols=116 Identities=8% Similarity=0.010 Sum_probs=81.3
Q ss_pred cEEEEEEeeecCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEE
Q 019026 83 SYKEKFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEI 162 (347)
Q Consensus 83 ~y~~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I 162 (347)
.-+..+.+...|.+.+|.+.=..+|.|+.|+|..-+.... .+..-.+.=-+++|.+|...||.|.+
T Consensus 290 ~~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r~a--------------~~~~vt~svd~v~F~~PV~vGdil~l 355 (437)
T PLN02647 290 RLENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAFA--------------GLRPYFLEVDHVDFLRPVDVGDFLRF 355 (437)
T ss_pred ceEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHHHHc--------------CCceEEEEecceEecCccccCcEEEE
Confidence 3456677999999999999999999999998886554422 12223333357999999999999998
Q ss_pred EEEEeeeC-----CeEEEEEEE--EEEC--CCCcEEEEEEEEEEEEeC-CCCceecCCHH
Q 019026 163 ETWCQSEG-----RIGTRRDWI--LKDY--ATGEVIGRATSKWVMMNQ-DTRRLQKVSDD 212 (347)
Q Consensus 163 ~Twv~~~~-----r~~~~R~f~--I~d~--~~Gevia~a~S~wVlvDl-~trRpvrlp~e 212 (347)
+..+...+ +.++..+-. +.+. .+++++..+..++|..|- ..++|+++|+-
T Consensus 356 ~A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~~~~g~p~~Vp~V 415 (437)
T PLN02647 356 KSCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPEAAMKNGFKIRNV 415 (437)
T ss_pred EEEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEeccccCCCCccCCee
Confidence 76655443 344433322 2232 345678899999999886 35788877653
No 50
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=93.53 E-value=0.81 Score=37.29 Aligned_cols=55 Identities=9% Similarity=-0.102 Sum_probs=44.4
Q ss_pred ceEEEEEeEEEEeecCCCCCEEEEEEEEeeeCC----eEEEEEEEEEECCCCcEEEEEEE
Q 019026 139 LIWVTARMHIEIYKYPAWSDVVEIETWCQSEGR----IGTRRDWILKDYATGEVIGRATS 194 (347)
Q Consensus 139 l~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r----~~~~R~f~I~d~~~Gevia~a~S 194 (347)
..+++...+++|.+|...||+|+++.++..... ..........+ ++|+++..|..
T Consensus 66 ~~~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n-~~g~~v~~g~~ 124 (127)
T cd03441 66 DGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARN-QGGEVVLSGEA 124 (127)
T ss_pred ccceeEEeEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEe-CCCCEEEEEEE
Confidence 457788999999999999999999999998742 34556677788 78888877654
No 51
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=93.52 E-value=0.81 Score=38.65 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=42.1
Q ss_pred EEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCC-CcEEEEEEEE
Q 019026 142 VTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYAT-GEVIGRATSK 195 (347)
Q Consensus 142 VV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~-Gevia~a~S~ 195 (347)
.+..++++|.+|...||+|+++.|+.+...-....++.+++ ++ |+++..+...
T Consensus 69 ~~~~~~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~n-q~~g~~V~~g~~~ 122 (126)
T cd03447 69 RVRSFTASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARN-EETGELVLRGEAE 122 (126)
T ss_pred eEEEEEEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEE-CCCCCEEEEEEEE
Confidence 44567999999999999999999998865444556778888 66 8888777654
No 52
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=93.02 E-value=0.56 Score=39.66 Aligned_cols=51 Identities=12% Similarity=-0.050 Sum_probs=41.9
Q ss_pred eEEEEeecCCCCCEEEEEEEEeeeC-------CeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 146 MHIEIYKYPAWSDVVEIETWCQSEG-------RIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 146 ~~Iei~r~p~~gD~V~I~Twv~~~~-------r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
.+++|.+|...||+|+++.++.+.. +-.......+.| ++|++++++..+.+
T Consensus 81 ~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~~ 138 (140)
T cd03454 81 DELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLN-QRGEVVLTFEATVL 138 (140)
T ss_pred eeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEc-CCCCEEEEEEehhe
Confidence 4899999999999999999998763 224566778888 99999999887654
No 53
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=92.93 E-value=1.5 Score=38.75 Aligned_cols=60 Identities=12% Similarity=0.084 Sum_probs=48.2
Q ss_pred EEeEEEEeecCCCCCEEEEEEEEeee----CCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCC
Q 019026 144 ARMHIEIYKYPAWSDVVEIETWCQSE----GRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTR 204 (347)
Q Consensus 144 ~r~~Iei~r~p~~gD~V~I~Twv~~~----~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~tr 204 (347)
...+++|.+|...||+|+++..+... ++-....+..++| ++|++++++.++.+.-..+.+
T Consensus 87 ~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~N-q~Ge~V~~~~~~~~~r~~~~~ 150 (159)
T PRK13692 87 VDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTN-EEGDVVQETYTTLAGRAGEDG 150 (159)
T ss_pred eeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEc-CCCCEEEEEEEEEEEecCCcC
Confidence 34789999999999999999998754 2235566778888 999999999999887765544
No 54
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=92.68 E-value=0.77 Score=38.61 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=40.8
Q ss_pred eEEEEeecCCCCCEEEEEEEEeeeCC------eEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 146 MHIEIYKYPAWSDVVEIETWCQSEGR------IGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 146 ~~Iei~r~p~~gD~V~I~Twv~~~~r------~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
.+++|.+|...||+|+++.++.+... -.......++| ++|++++++..+.+
T Consensus 83 ~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~l 139 (140)
T cd03446 83 DNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVN-QRGEVVQSGEMSLL 139 (140)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEc-CCCCEEEEEEEeee
Confidence 48999999999999999999987631 23445567778 89999999887764
No 55
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=92.45 E-value=1.1 Score=37.47 Aligned_cols=52 Identities=10% Similarity=-0.030 Sum_probs=41.3
Q ss_pred EEEeEEEEeecCCCCCEEEEEEEEeee----CCeEEEEEEEEEECCCCcEEEEEEEE
Q 019026 143 TARMHIEIYKYPAWSDVVEIETWCQSE----GRIGTRRDWILKDYATGEVIGRATSK 195 (347)
Q Consensus 143 V~r~~Iei~r~p~~gD~V~I~Twv~~~----~r~~~~R~f~I~d~~~Gevia~a~S~ 195 (347)
+.++.++|.+|...||+|+++.++.+. ++-....+.++.+ ++|+++..+...
T Consensus 70 i~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~n-q~g~~v~~g~a~ 125 (127)
T cd03453 70 VVSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATD-QAGGKKVLGRAI 125 (127)
T ss_pred eEEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEE-cCCCEEEEEEEE
Confidence 457889999999999999999998764 2234556778888 999988887654
No 56
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=92.04 E-value=4.5 Score=34.16 Aligned_cols=89 Identities=13% Similarity=-0.002 Sum_probs=58.6
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEE-eEEEEeecCCCCCEEEEEEEEeeeCCeEEEE
Q 019026 98 NKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTAR-MHIEIYKYPAWSDVVEIETWCQSEGRIGTRR 176 (347)
Q Consensus 98 ~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r-~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R 176 (347)
+..+--.-+++++-+++..++- ..... ....+...++.. -+++|.++..-||+|++..++.....-....
T Consensus 50 ~pv~Pg~l~iE~~aQ~~~~~~~---~~~~~------~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~~~~~~~ 120 (140)
T TIGR01750 50 KPIMPGVLIVEALAQAGGVLAI---LSLGG------EIGKGKLVYFAGIDKAKFRRPVVPGDQLILHAEFLKKRRKIGKF 120 (140)
T ss_pred cCcChHHHHHHHHHHHHHHHhe---ccccc------cCCCCcEEEEeecceeEECCccCCCCEEEEEEEEEEccCCEEEE
Confidence 3345555677888777765542 11110 001222344444 5999999999999999999988765544555
Q ss_pred EEEEEECCCCcEEEEEEEEEE
Q 019026 177 DWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 177 ~f~I~d~~~Gevia~a~S~wV 197 (347)
+..++ .+|+++++|....+
T Consensus 121 ~~~~~--~~g~~va~~~~~~~ 139 (140)
T TIGR01750 121 KGEAT--VDGKVVAEAEITFA 139 (140)
T ss_pred EEEEE--ECCEEEEEEEEEEE
Confidence 66665 58999999988764
No 57
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=91.84 E-value=7.4 Score=33.17 Aligned_cols=86 Identities=9% Similarity=-0.029 Sum_probs=58.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEE-eEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEE
Q 019026 101 ATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTAR-MHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWI 179 (347)
Q Consensus 101 v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r-~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~ 179 (347)
+.-.-+++++-+++..++... . . ..+..+++.. -+++|.+|...||+|+++.++...++.....+.+
T Consensus 60 ~PG~l~iE~~aQ~~~~~~~~~--~-~---------~~~~~~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~~~~v~~~~~ 127 (147)
T PRK00006 60 MPGVLIIEAMAQAAGVLALKS--E-E---------NKGKLVYFAGIDKARFKRPVVPGDQLILEVELLKQRRGIWKFKGV 127 (147)
T ss_pred CchhHHHHHHHHHHHHHHhcC--c-C---------cCCcEEEEeeeeEEEEccccCCCCEEEEEEEEEEeeCCEEEEEEE
Confidence 444556676766666544221 1 1 1223344444 4799999999999999999998876555555666
Q ss_pred EEECCCCcEEEEEEEEEEEEe
Q 019026 180 LKDYATGEVIGRATSKWVMMN 200 (347)
Q Consensus 180 I~d~~~Gevia~a~S~wVlvD 200 (347)
++ .+|+++++|....++-|
T Consensus 128 ~~--~~g~~v~~~~~~~~~~~ 146 (147)
T PRK00006 128 AT--VDGKLVAEAELMFAIRD 146 (147)
T ss_pred EE--ECCEEEEEEEEEEEEEc
Confidence 76 48999999999887644
No 58
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=91.80 E-value=0.99 Score=38.20 Aligned_cols=52 Identities=10% Similarity=-0.102 Sum_probs=41.5
Q ss_pred eEEEEeecCCCCCEEEEEEEEeeeCC-------eEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019026 146 MHIEIYKYPAWSDVVEIETWCQSEGR-------IGTRRDWILKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 146 ~~Iei~r~p~~gD~V~I~Twv~~~~r-------~~~~R~f~I~d~~~Gevia~a~S~wVl 198 (347)
.+++|.+|...||+|+++.++.+... .......++++ ++|++++++..+.++
T Consensus 84 ~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 142 (146)
T cd03451 84 DEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYN-QDGEPVLSFERTALV 142 (146)
T ss_pred cEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEEC-CCCCEEEEEEehhEE
Confidence 48999999999999999999987632 34455567777 899999999876543
No 59
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=91.18 E-value=1 Score=37.51 Aligned_cols=52 Identities=13% Similarity=0.058 Sum_probs=38.7
Q ss_pred ceEEEEEeEEEEeecCCCCCEEEEEEEEeeeC-------CeEEEEEEEEEECCCCcEEEE
Q 019026 139 LIWVTARMHIEIYKYPAWSDVVEIETWCQSEG-------RIGTRRDWILKDYATGEVIGR 191 (347)
Q Consensus 139 l~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~-------r~~~~R~f~I~d~~~Gevia~ 191 (347)
..-+-...+++|++|+..||+|++++.+..+. ......+.+++| ++|+++++
T Consensus 73 ~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~-~~Ge~v~t 131 (132)
T PF13452_consen 73 TRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTD-QDGELVAT 131 (132)
T ss_dssp GGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE--CTTEEEEE
T ss_pred hhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEEC-CCCCEEEe
Confidence 45566789999999999999999999998862 223455677888 99999875
No 60
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=91.00 E-value=9.2 Score=32.70 Aligned_cols=95 Identities=15% Similarity=0.108 Sum_probs=66.5
Q ss_pred EEEEeeecCCCCCCccCHHHHHHHHHHHHHHH----HHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEE
Q 019026 86 EKFIVRCYEVGINKTATVETIANLLQEVGCNH----AQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVE 161 (347)
Q Consensus 86 ~~~~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h----~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~ 161 (347)
.+..+.. ..+..|.++=..++.++..+.+.. +...+. +..-|+...+|+|.+|..- + +.
T Consensus 26 v~~pl~~-n~N~~G~~hGG~l~tlad~a~~~~~~~~~~~~~~--------------~~~~vt~~~~i~yl~P~~~-~-~~ 88 (138)
T TIGR02447 26 LSAPLAA-NINHHGTMFGGSLYTLATLSGWGLLWLRLQELGI--------------DGDIVIADSHIRYLAPVTG-D-PV 88 (138)
T ss_pred EEeECCC-CcCCCCceehhHHHHHHHHHHHHHHHHHHHHhCC--------------CCcEEEEEeeeEEcCCcCC-C-eE
Confidence 3445666 488999999999999996554331 222222 2345788999999998864 3 55
Q ss_pred EEEEE-------------eeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 162 IETWC-------------QSEGRIGTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 162 I~Twv-------------~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
++..+ ..-+|.....+-+|++ +|+++|++..+++.+
T Consensus 89 a~~~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~--~~~lvA~~~g~~~~~ 137 (138)
T TIGR02447 89 ANCEAPDLESWEAFLATLQRGGKARVKLEAQISS--DGKLAATFSGEYVAL 137 (138)
T ss_pred EEEEcCCHHHHHHHHHHHHhCCceEEEEEEEEEE--CCEEEEEEEEEEEEe
Confidence 55444 3446777667788886 789999999999875
No 61
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=90.59 E-value=3 Score=37.69 Aligned_cols=58 Identities=9% Similarity=-0.118 Sum_probs=45.1
Q ss_pred ceEEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019026 139 LIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 139 l~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVl 198 (347)
...+..-.+++|.+|...||+|.+++++.+.++.....+..++ .+|+++++|....+.
T Consensus 124 ~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~--v~g~~V~ege~~~~~ 181 (185)
T PRK04424 124 ELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSY--VGDELVFRGKFIMYR 181 (185)
T ss_pred cEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 3445566799999999999999999999987654444445555 589999999887765
No 62
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=90.08 E-value=2.4 Score=43.76 Aligned_cols=66 Identities=12% Similarity=0.073 Sum_probs=50.3
Q ss_pred eEEEEEeEEEEeecCCCCCEEEEEEEEeee--CCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCce
Q 019026 140 IWVTARMHIEIYKYPAWSDVVEIETWCQSE--GRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRL 206 (347)
Q Consensus 140 ~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~--~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRp 206 (347)
+.+....+++|.+|...||+|+++.++.+. ++........++| ++|+++..+..++++-...=.+|
T Consensus 82 ~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~n-q~G~~V~~g~~~~l~~~~~~~~~ 149 (466)
T PRK08190 82 GTIYLGQSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTN-QDGEVVITGTAEVIAPTEKVRRP 149 (466)
T ss_pred ceEEEEEEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEe-CCCCEEEEEEEEeeccccccccc
Confidence 345567899999999999999999999775 3334555667788 99999999988777655444434
No 63
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=88.94 E-value=2.5 Score=36.17 Aligned_cols=52 Identities=12% Similarity=0.115 Sum_probs=41.6
Q ss_pred eEEEEeecCCCCCEEEEEEEEeeeC--C----eEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019026 146 MHIEIYKYPAWSDVVEIETWCQSEG--R----IGTRRDWILKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 146 ~~Iei~r~p~~gD~V~I~Twv~~~~--r----~~~~R~f~I~d~~~Gevia~a~S~wVl 198 (347)
.+++|.+|...||+|+++..+.... + -....+..+.| ++|++++++...+++
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 138 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTN-QNGELVASYDILTLV 138 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEe-cCCCEEEEEEehHee
Confidence 4899999999999999999988862 1 24556677888 999999998865543
No 64
>PRK10694 acyl-CoA esterase; Provisional
Probab=88.53 E-value=2.7 Score=36.00 Aligned_cols=75 Identities=8% Similarity=0.036 Sum_probs=57.6
Q ss_pred cceecccCCCCCCCccchhHHHHHHHHHhhHhH--hhc--cceEEE-EEE-eecCCCCCEEEEEEEeccccccccccccc
Q 019026 252 LGLIPRRADLDMNQHVNNVTYIGWLLEVSTMRM--ATK--LFLAFL-FLP-NRNCYISTTLKFFLSNSCLCMTEHASRCH 325 (347)
Q Consensus 252 ~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e~--~~~--~~l~~i-~I~-~~E~~~gd~v~v~t~~~~~c~~~~~~~~~ 325 (347)
..+.+...|...+|-+.-...+.|+.++.-.-. +.. ....++ .|+ +++++.||.|.+...+.
T Consensus 14 ~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~~~~~~vtv~vd~i~F~~Pv~~Gd~l~~~a~V~------------ 81 (133)
T PRK10694 14 LRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCV------------ 81 (133)
T ss_pred EEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHHcCCceEEEEECceEECCCcccCcEEEEEEEEE------------
Confidence 356788999999999999999999998753221 112 245555 558 99999999999999988
Q ss_pred cCCCCCCcceEEEeee
Q 019026 326 RHPRTPDYHLRLQTRM 341 (347)
Q Consensus 326 ~~~~~~~~~~~~~~~~ 341 (347)
.+|.+|+.++-+.
T Consensus 82 ---~~g~sS~~v~v~v 94 (133)
T PRK10694 82 ---KTGTTSISINIEV 94 (133)
T ss_pred ---EccCceEEEEEEE
Confidence 7778887776544
No 65
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=86.20 E-value=4.9 Score=37.23 Aligned_cols=58 Identities=19% Similarity=0.188 Sum_probs=48.3
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEEeC
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMMNQ 201 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl 201 (347)
..+..+++.|.++...+ .+++++...+.||.+..+.-+++ ++|+++++|...+.--+.
T Consensus 34 ~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~--q~~~~~~~a~~~f~~~~~ 91 (255)
T PF13622_consen 34 FDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELS--QDGKVVATATASFGRPEP 91 (255)
T ss_dssp SEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEE--ETTEEEEEEEEEEE--TT
T ss_pred CceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEE--ECCcCEEEEEEEEccCcC
Confidence 78999999999999999 99999999999999999999998 589889888887665553
No 66
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=86.13 E-value=6.2 Score=31.51 Aligned_cols=54 Identities=22% Similarity=0.147 Sum_probs=47.3
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKW 196 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~w 196 (347)
..+..+++.|.+++..+..|++++....-+|.+..+.-.+. ++|+++..+...+
T Consensus 39 ~~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~--Q~g~~~~~a~~sf 92 (94)
T cd03445 39 RVPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAV--QNGKVIFTATASF 92 (94)
T ss_pred CCeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEE--ECCEEEEEEEEEE
Confidence 35678999999999999999999999999999999988887 5899888887654
No 67
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=82.82 E-value=28 Score=29.34 Aligned_cols=88 Identities=10% Similarity=-0.005 Sum_probs=57.7
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCC-EEEEEEEEee---eCCeE
Q 019026 98 NKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSD-VVEIETWCQS---EGRIG 173 (347)
Q Consensus 98 ~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD-~V~I~Twv~~---~~r~~ 173 (347)
+..+--.-+++.+-+++..++...+..... -......+...--+++|.++..-|| .++++..+.+ .....
T Consensus 47 ~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~kF~~~v~Pg~~~l~~~v~i~~~~~~~~~~ 120 (138)
T PF07977_consen 47 DPVMPGVLLIEAMAQAAGFLAGYSGLAEGT------GEARKVPFLAGIRNVKFRGPVYPGDKTLRIEVEIKKIRRREGGM 120 (138)
T ss_dssp S--B-HHHHHHHHHHHHHHHHHHHCCSSSC------CCCCEEEEEEEEEEEEE-S-B-TTE-EEEEEEEEEEEEEEETTE
T ss_pred CCCCCeEhHHHHHHHHHHhHhhhccccccC------CCcceEEEeccccEEEECccEeCCCcEEEEEEEEEEeecccCCE
Confidence 445566667788888888777666542110 0011245566678899999999999 9999999998 55566
Q ss_pred EEEEEEEEECCCCcEEEEEE
Q 019026 174 TRRDWILKDYATGEVIGRAT 193 (347)
Q Consensus 174 ~~R~f~I~d~~~Gevia~a~ 193 (347)
+..+..++- +|+.+++|+
T Consensus 121 ~~~~~~~~v--dg~~v~~~~ 138 (138)
T PF07977_consen 121 AIFDGTAYV--DGELVAEAE 138 (138)
T ss_dssp EEEEEEEEE--TTEEEEEEE
T ss_pred EEEEEEEEE--CCEEEEEEC
Confidence 666777875 899998874
No 68
>PLN02864 enoyl-CoA hydratase
Probab=82.25 E-value=8.6 Score=37.64 Aligned_cols=60 Identities=17% Similarity=0.084 Sum_probs=47.8
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeC---C-eEEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEG---R-IGTRRDWILKDYATGEVIGRATSKWVMMN 200 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~---r-~~~~R~f~I~d~~~Gevia~a~S~wVlvD 200 (347)
-|=....|+++||...++.+++++++..+. + .....+..+.+.++|+++++..++.++-.
T Consensus 94 lVHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg 157 (310)
T PLN02864 94 LLHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRG 157 (310)
T ss_pred eeeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeC
Confidence 355678899999999999999999999872 2 22456677777568999999988887765
No 69
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=82.21 E-value=0.19 Score=45.70 Aligned_cols=103 Identities=11% Similarity=-0.005 Sum_probs=82.6
Q ss_pred EeeecCCCCCC-ccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEEe
Q 019026 89 IVRCYEVGINK-TATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQ 167 (347)
Q Consensus 89 ~Vr~~D~D~~G-~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv~ 167 (347)
..-..|+|..- |+||+.|++=+.-|+.+|+...|.-. .+...+...|....-+.|.|.++.-+...|.|.+.
T Consensus 56 ~cls~dlDtll~HmnNArYfrElDfAR~~~~~r~~l~~-------~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRiI 128 (213)
T KOG4366|consen 56 LCLSTDLDTLLSHMNNARYFRELDFARVNFYCRTGLYL-------MLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRII 128 (213)
T ss_pred eeecchHHHHHHHhhhhHHHHHhhHHHHHHHHHHhHHH-------HHHhcCCCeeechhhhhhhhhcCCCCccceeeEEE
Confidence 34456777665 99999999999999999998887631 24666777788888889999999999999999998
Q ss_pred eeC--CeEEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019026 168 SEG--RIGTRRDWILKDYATGEVIGRATSKWVMMN 200 (347)
Q Consensus 168 ~~~--r~~~~R~f~I~d~~~Gevia~a~S~wVlvD 200 (347)
... -++..-.|.+. .+|=+++-+.+..++.|
T Consensus 129 ~WDekaiyle~rFv~~--sd~fvcala~~kq~l~d 161 (213)
T KOG4366|consen 129 CWDEKAIYLESRFVIL--SDGFVCALALTKQVLKD 161 (213)
T ss_pred EEchhhhhhhhheeec--cCceEeehHHHHHHHhc
Confidence 874 44444445555 68999999999999999
No 70
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=79.13 E-value=14 Score=32.73 Aligned_cols=72 Identities=10% Similarity=0.068 Sum_probs=54.1
Q ss_pred cceecccCCCCCCCccchhHHHHHHHHHhh---HhHhhccceEEE---EEE-eecCCCCCEEEEEEEecccccccccccc
Q 019026 252 LGLIPRRADLDMNQHVNNVTYIGWLLEVST---MRMATKLFLAFL---FLP-NRNCYISTTLKFFLSNSCLCMTEHASRC 324 (347)
Q Consensus 252 ~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp---~e~~~~~~l~~i---~I~-~~E~~~gd~v~v~t~~~~~c~~~~~~~~ 324 (347)
....|-++|.+.||-+.=..-+.|+.++.. .++.. ..+..+ +|+ .++++.||.|.++.++.
T Consensus 16 ~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~a~-~~vVTasvd~v~F~~Pv~vGd~v~~~a~v~----------- 83 (157)
T COG1607 16 LRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRHAG-GRVVTASVDSVDFKKPVRVGDIVCLYARVV----------- 83 (157)
T ss_pred EEEEecCCccCcccccccHHHHHHHHHHHHHHHHHHhC-CeEEEEEeceEEEccccccCcEEEEEEEEe-----------
Confidence 456788999999999888888888877642 22322 234444 456 99999999999999988
Q ss_pred ccCCCCCCcceEEEe
Q 019026 325 HRHPRTPDYHLRLQT 339 (347)
Q Consensus 325 ~~~~~~~~~~~~~~~ 339 (347)
.+|..||.+.=
T Consensus 84 ----~~GrTSm~V~V 94 (157)
T COG1607 84 ----YTGRTSMEVGV 94 (157)
T ss_pred ----ecCcccEEEEE
Confidence 88888888753
No 71
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=75.90 E-value=49 Score=28.15 Aligned_cols=89 Identities=9% Similarity=-0.053 Sum_probs=59.3
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCC-CCEEEEEEEEeeeCC-eEEE
Q 019026 98 NKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAW-SDVVEIETWCQSEGR-IGTR 175 (347)
Q Consensus 98 ~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~-gD~V~I~Twv~~~~r-~~~~ 175 (347)
++.+.-..++++|-+++..+.-..... ++ .+...+..+.=-+++|+++..- ||.+.|+.......+ -...
T Consensus 44 ~~~~P~~l~iE~mAQa~a~~~g~~~~~-~~-------~~~~~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~ 115 (138)
T cd01289 44 HGRLPAWVGIEYMAQAIAAHGGLLARQ-QG-------NPPRPGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGV 115 (138)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHh-cC-------CCCCcEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEE
Confidence 378888999999999887764211110 00 1223455555568999998655 999999998777643 4444
Q ss_pred EEEEEEECCCCcEEEEEEEEE
Q 019026 176 RDWILKDYATGEVIGRATSKW 196 (347)
Q Consensus 176 R~f~I~d~~~Gevia~a~S~w 196 (347)
.+-.++- +|+++++|....
T Consensus 116 ~~~~~~v--~~~~va~a~l~~ 134 (138)
T cd01289 116 FECTIED--QGGVLASGRLNV 134 (138)
T ss_pred EEEEEEE--CCEEEEEEEEEE
Confidence 4556664 789999987653
No 72
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=75.41 E-value=92 Score=32.44 Aligned_cols=87 Identities=7% Similarity=-0.104 Sum_probs=55.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEE-eEEEEeecCCCCCEEEEEEEEee-eCCeEEEEEE
Q 019026 101 ATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTAR-MHIEIYKYPAWSDVVEIETWCQS-EGRIGTRRDW 178 (347)
Q Consensus 101 v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r-~~Iei~r~p~~gD~V~I~Twv~~-~~r~~~~R~f 178 (347)
+.-.-.+++|-+++..++.. +.+. ..+..+.+.. -+++|.+|..-||+|++++.+.. ..+.....+-
T Consensus 373 ~PGVL~IEaMAQaagil~~~-~~~~----------~~g~lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~giv~f~g 441 (464)
T PRK13188 373 MPGVLQIEAMAQTGGILVLN-TVPD----------PENYSTYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRGICQMQG 441 (464)
T ss_pred cccHHHHHHHHHHHHHHHhh-ccCC----------CCCceEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCCEEEEEE
Confidence 44444577777766544421 2110 1232334444 48999999999999999999876 3232333444
Q ss_pred EEEECCCCcEEEEEEEEEEEEe
Q 019026 179 ILKDYATGEVIGRATSKWVMMN 200 (347)
Q Consensus 179 ~I~d~~~Gevia~a~S~wVlvD 200 (347)
.++ .+|+++++|....++.+
T Consensus 442 ~~~--vdGelVaeael~~~v~~ 461 (464)
T PRK13188 442 KAY--VNGKLVCEAELMAQIVK 461 (464)
T ss_pred EEE--ECCEEEEEEEEEEEEec
Confidence 555 58999999998887653
No 73
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=74.21 E-value=50 Score=27.53 Aligned_cols=88 Identities=13% Similarity=0.190 Sum_probs=59.4
Q ss_pred CCCccCHHHHHHHHHHHHHHHHHHc-CCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEEeeeCC----
Q 019026 97 INKTATVETIANLLQEVGCNHAQSV-GFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGR---- 171 (347)
Q Consensus 97 ~~G~v~~~~yl~~~qeaa~~h~~~l-G~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r---- 171 (347)
+.+|+..--+++-+-+++....... |. ..+..+++..+.++|.++..+.-.+.|++.+.....
T Consensus 39 ~~dh~~gmll~Ea~RQa~~~~~h~~~~v------------p~~~~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~ 106 (132)
T PF03756_consen 39 PGDHVPGMLLLEAARQAGIALAHRFYGV------------PLDHQFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGR 106 (132)
T ss_pred CCCccChHHHHHHHHHHHHHhhccccCC------------CCCceEEEEEEEEEEccccccCCCEEEEEEEEeccccCCc
Confidence 3456666555555555555433322 22 234568999999999999888888888887765322
Q ss_pred -eEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019026 172 -IGTRRDWILKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 172 -~~~~R~f~I~d~~~Gevia~a~S~wVl 198 (347)
........++ ++|++++++...|-|
T Consensus 107 ~~~~~~~v~~~--q~g~~~a~~~~~~tc 132 (132)
T PF03756_consen 107 PRGLRFRVTVS--QGGRVVATASMTFTC 132 (132)
T ss_pred cceEEEEEEEE--ECCEEEEEEEEEEEC
Confidence 3445556676 699999999988754
No 74
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=72.63 E-value=15 Score=34.61 Aligned_cols=55 Identities=11% Similarity=0.048 Sum_probs=48.6
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
..+..+++.|.+++..+..|++++....-||.+..|.-.++ ++|++++++...+.
T Consensus 44 ~~~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~--Q~g~~~~~a~asf~ 98 (271)
T TIGR00189 44 FIPHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAV--QHGKTIFTLQASFQ 98 (271)
T ss_pred CCcceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEE--ECCEEEEEEEEEcc
Confidence 34568999999999999999999999999999999988887 58999998877665
No 75
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=72.24 E-value=24 Score=30.90 Aligned_cols=58 Identities=9% Similarity=-0.058 Sum_probs=43.6
Q ss_pred eEEEEEeEEEEeecCCCCCEEEEEEEEeeeC-----CeEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 140 IWVTARMHIEIYKYPAWSDVVEIETWCQSEG-----RIGTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 140 ~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~-----r~~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
+-.+.-..++|.+|...||+|..++++.... +.... ..+.++ +.|++...+...+++.
T Consensus 93 ~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~-~~~~~~-~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 93 GANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTL-RLETVN-QEGELVLTLEATVLVL 155 (159)
T ss_pred eeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEE-EEEEEc-cCCcEEEEEEEeEeEe
Confidence 3455567899999999999999999998752 33332 345666 8899888888887764
No 76
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=71.48 E-value=27 Score=28.24 Aligned_cols=56 Identities=11% Similarity=-0.033 Sum_probs=45.4
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
-.-..+.|.|+.++...|-+..+.+....+.-+..-+=.|++ ++|+++|....+-+
T Consensus 48 ~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~-~~G~LvAs~~Q~~l 103 (104)
T cd03444 48 SASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFT-RDGELVASVAQEGL 103 (104)
T ss_pred eEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEEC-CCCCEEEEEEEeee
Confidence 356678899999999889999999988886555556678999 89999998877643
No 77
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=62.61 E-value=46 Score=27.76 Aligned_cols=47 Identities=9% Similarity=0.017 Sum_probs=31.8
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRA 192 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a 192 (347)
..+..+.++|.+|...||+|+++.|..+ + ... +.+...++|+++..+
T Consensus 70 ~~~~~~~~rF~~PV~~gDtl~~~~~~~~--~-~v~--~~~~~~~~g~~v~~g 116 (122)
T cd03448 70 ARFKAIKVRFSSPVFPGETLRTEMWKEG--N-RVI--FQTKVVERDVVVLSN 116 (122)
T ss_pred ceeEEEEEEEcCCccCCCEEEEEEEEeC--C-EEE--EEEEEccCCcEEEEC
Confidence 3466779999999999999999998543 3 222 333332466665544
No 78
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=60.01 E-value=39 Score=32.51 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=49.3
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
.++..+++-|.++...+..|+.++....-||.+..|.-..+ ++|+++..+...+-
T Consensus 55 ~~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~--Q~g~~if~~~~sF~ 109 (286)
T PRK10526 55 RLVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAI--QNGKPIFYMTASFQ 109 (286)
T ss_pred CCceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEE--ECCEEEEEEEEEec
Confidence 47889999999999999999999999999999999988887 69999988877665
No 79
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=58.70 E-value=4.3 Score=37.10 Aligned_cols=77 Identities=18% Similarity=0.100 Sum_probs=50.3
Q ss_pred ccCCCCCCC-ccchhHHHHHHHHHhhHhHh---------h---ccceEEE-EEE-eecCCCCCEEEEEEEeccccccccc
Q 019026 257 RRADLDMNQ-HVNNVTYIGWLLEVSTMRMA---------T---KLFLAFL-FLP-NRNCYISTTLKFFLSNSCLCMTEHA 321 (347)
Q Consensus 257 r~sDiD~n~-HVNN~~Y~~w~~d~lp~e~~---------~---~~~l~~i-~I~-~~E~~~gd~v~v~t~~~~~c~~~~~ 321 (347)
-.+|+|..- |+||++|++=+.=+ ...++ . .+.+... .+. +||+++=+...|.+.. +|--|.+
T Consensus 58 ls~dlDtll~HmnNArYfrElDfA-R~~~~~r~~l~~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRi--I~WDeka 134 (213)
T KOG4366|consen 58 LSTDLDTLLSHMNNARYFRELDFA-RVNFYCRTGLYLMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRI--ICWDEKA 134 (213)
T ss_pred ecchHHHHHHHhhhhHHHHHhhHH-HHHHHHHHhHHHHHHhcCCCeeechhhhhhhhhcCCCCccceeeEE--EEEchhh
Confidence 348999887 99999999865433 22222 1 1333333 445 9999999998887664 3555544
Q ss_pred cc-cccCCCCCCcceE
Q 019026 322 SR-CHRHPRTPDYHLR 336 (347)
Q Consensus 322 ~~-~~~~~~~~~~~~~ 336 (347)
-+ ++||..-.|.-++
T Consensus 135 iyle~rFv~~sd~fvc 150 (213)
T KOG4366|consen 135 IYLESRFVILSDGFVC 150 (213)
T ss_pred hhhhhheeeccCceEe
Confidence 44 6888877776543
No 80
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=58.68 E-value=1.2e+02 Score=26.31 Aligned_cols=94 Identities=13% Similarity=-0.134 Sum_probs=61.9
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCC-EEEEEEEEeeeCC----e
Q 019026 98 NKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSD-VVEIETWCQSEGR----I 172 (347)
Q Consensus 98 ~G~v~~~~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD-~V~I~Twv~~~~r----~ 172 (347)
+..+--.-.++.|-++...++-..|..... =.....++...--+++|+++..-|| +++++..+.+.+. .
T Consensus 49 ~pvmPG~L~iEamaQ~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~ 122 (150)
T cd01287 49 DPVMPGSLGLEAMIQLLQFYLIWLGLGTGV------DNPRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRP 122 (150)
T ss_pred CCcCchHHHHHHHHHHHHHHHhhccccccc------CcccceeEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCcc
Confidence 455566667777777766665444432110 0011234445556799999999999 8999999999853 4
Q ss_pred EEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 173 GTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 173 ~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
...-+-.++ -+|+++++|...-|.+
T Consensus 123 ~~~~~~~~~--vdg~~v~~a~~~~~~~ 147 (150)
T cd01287 123 YIIADASLW--VDGLRIYEAKDIAVRL 147 (150)
T ss_pred EEEEEEEEE--ECCEEEEEEEccEEEe
Confidence 455555666 4899999998765544
No 81
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=56.50 E-value=27 Score=28.68 Aligned_cols=34 Identities=9% Similarity=-0.104 Sum_probs=27.4
Q ss_pred eEEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeE
Q 019026 140 IWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIG 173 (347)
Q Consensus 140 ~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~ 173 (347)
...+.+++++|.+|...||+|+++.++.+.....
T Consensus 75 ~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~~~ 108 (122)
T PF01575_consen 75 PARLGRFNVRFRAPVFPGDTLTAEVEVTEKREGK 108 (122)
T ss_dssp CEEEEEEEEEESS--BTTEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEeccccCCCEEEEEEEEEEEEEcC
Confidence 5788889999999999999999999999854443
No 82
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=56.03 E-value=76 Score=29.70 Aligned_cols=55 Identities=9% Similarity=-0.079 Sum_probs=41.8
Q ss_pred EEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 142 VTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 142 VV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
.-..+.|.|+++...+|-+..+++....+.-...-.=.|+| ++|+++|.+...-+
T Consensus 215 aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~~~~l~d-~~G~lvAs~~Qe~l 269 (271)
T TIGR00189 215 ASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLVEGKIFT-RDGVLIASTVQEGL 269 (271)
T ss_pred EeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEEEEEEEC-CCCCEEEEEEeeee
Confidence 45667888989877899999999888764333334468999 99999999877644
No 83
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=52.65 E-value=1.2e+02 Score=27.93 Aligned_cols=54 Identities=15% Similarity=0.160 Sum_probs=38.6
Q ss_pred EEEeEEEEeecC-CCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 143 TARMHIEIYKYP-AWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 143 V~r~~Iei~r~p-~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
-..+.|.|++.| .-++-+.++++......-...-+-+|+| ++|+++|.+...-+
T Consensus 200 tld~ti~f~~~p~~~~~Wl~~~~~~~~~~~Gr~~~~~~l~d-~~G~lvA~~~Q~~l 254 (255)
T PF13622_consen 200 TLDHTIHFHRLPFDGDEWLLLEARSPRAGNGRALMEGRLWD-EDGRLVASSRQEAL 254 (255)
T ss_dssp EEEEEEEECSHCCTTTS-EEEEEEEEEEETTEEEEEEEEEE-TTS-EEEEEEEEEE
T ss_pred cceeEEEEEeCCccCCceEEEEEEEeEeCCCEEEEEEEEEC-CCCCEEEEEEEEee
Confidence 566677764444 4589999999988875555556678999 99999999887654
No 84
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=50.93 E-value=49 Score=35.86 Aligned_cols=51 Identities=6% Similarity=0.006 Sum_probs=39.5
Q ss_pred eEEEEeecCCCCCEEEEEEEEeeeC--C---e-EEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 146 MHIEIYKYPAWSDVVEIETWCQSEG--R---I-GTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 146 ~~Iei~r~p~~gD~V~I~Twv~~~~--r---~-~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
.+++|.+|...||+|+++..+.... + . .+..+..+.+ ++|+++.++...++
T Consensus 604 ~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~n-q~G~~Vl~~~~~~l 660 (663)
T TIGR02278 604 ENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVN-QNGEPVATYDVLTL 660 (663)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEc-CCCCEEEEEEEHHh
Confidence 4899999999999999999998652 1 1 3455667787 89999888876543
No 85
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=50.88 E-value=52 Score=35.66 Aligned_cols=50 Identities=14% Similarity=0.186 Sum_probs=39.6
Q ss_pred EEEEeecCCCCCEEEEEEEEeeeC--C----eEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 147 HIEIYKYPAWSDVVEIETWCQSEG--R----IGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 147 ~Iei~r~p~~gD~V~I~Twv~~~~--r----~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
+++|.+|...||+|+++..+.... + .....+..+.+ ++|+++.++...++
T Consensus 617 ~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~G~~V~~~~~~~l 672 (675)
T PRK11563 617 NLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTN-QDGELVATYDILTL 672 (675)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEE-CCCCEEEEEEEHHh
Confidence 799999999999999999998862 1 23556677888 89999888776543
No 86
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=48.73 E-value=2.2e+02 Score=27.86 Aligned_cols=101 Identities=9% Similarity=-0.037 Sum_probs=63.7
Q ss_pred EeeecCCCCCCccCHHHHHHHHHHHHHHHHH--HcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEE
Q 019026 89 IVRCYEVGINKTATVETIANLLQEVGCNHAQ--SVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWC 166 (347)
Q Consensus 89 ~Vr~~D~D~~G~v~~~~yl~~~qeaa~~h~~--~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv 166 (347)
-||...-=++-..-+..++.|+.|--.-... ..|.+. ...++.-+-....+-|+||.+.+|-|.-.+..
T Consensus 181 Wira~~~~pdd~~~~~~lLay~SD~~ll~tal~~Hg~~~---------~~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~s 251 (289)
T COG1946 181 WIRARGELPDDPRLHQALLAYLSDFTLLDTALQPHGLGF---------LTPGIQVASLDHSMWFHRPFRLDDWLLYAQES 251 (289)
T ss_pred EEEcCCCCCCCHHHHHHHHHHhccchhhhhhhccCCCcc---------ccCcceEeeccceEEEeccccCCCEEEEEeeC
Confidence 3343333334444455667777665422211 123321 23455566667889999999999999988887
Q ss_pred eeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 167 QSEGRIGTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 167 ~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
......+..-.=.|++ ++|+++|....+-++-
T Consensus 252 p~A~~~rgl~~G~lf~-r~G~LiA~~~QEG~~r 283 (289)
T COG1946 252 PSASGGRGLVRGQLFD-RDGQLIASVVQEGLIR 283 (289)
T ss_pred CcccCCcceeeeEEEc-CCCCEEEEEeeeEEEe
Confidence 7764333333346888 9999999888777664
No 87
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=48.42 E-value=1.9e+02 Score=25.33 Aligned_cols=61 Identities=11% Similarity=0.022 Sum_probs=47.2
Q ss_pred ceEEEEEeEEEEeecCCCCCEEEEEEEEeeeC-CeEEEEEEEEEECCCCcEEEEEEEEEEEEeC
Q 019026 139 LIWVTARMHIEIYKYPAWSDVVEIETWCQSEG-RIGTRRDWILKDYATGEVIGRATSKWVMMNQ 201 (347)
Q Consensus 139 l~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~-r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl 201 (347)
+...+.=-+.+|.++..-||.+.++....+.+ +.....+-... -+|+++++|+...+.++.
T Consensus 85 ~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~--Vdg~~v~~a~~~~~~~~~ 146 (147)
T COG0764 85 LGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVAT--VDGKVVAEAELLFAGVEK 146 (147)
T ss_pred EEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEE--ECCEEEEEEEEEEEEeec
Confidence 55666667899999999999999999988887 44443333444 589999999998887653
No 88
>PLN02864 enoyl-CoA hydratase
Probab=45.97 E-value=97 Score=30.31 Aligned_cols=51 Identities=6% Similarity=-0.052 Sum_probs=36.0
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKW 196 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~w 196 (347)
-.+.+++++|.+|...||+|.++.|..+ +. .. |++...++|+++..|....
T Consensus 253 ~~~~~~~~rF~~PV~pGdtl~~~~~~~~--~~-v~--~~~~~~~~g~~vl~G~a~~ 303 (310)
T PLN02864 253 TAVKTISGRFLLHVYPGETLVTEMWLEG--LR-VI--YQTKVKERNKAVLSGYVDL 303 (310)
T ss_pred ceEEEEEEEEcCCccCCCEEEEEEEeCC--CE-EE--EEEEEecCCeEEEEEEEEE
Confidence 3567899999999999999999998653 22 22 3333336788777776543
No 89
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=44.30 E-value=2.9e+02 Score=26.41 Aligned_cols=58 Identities=9% Similarity=-0.076 Sum_probs=44.0
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
-.-..+.|.|+++.+.+|-+..+++....+.-+..-.=.|++ ++|+++|.+..+-++-
T Consensus 226 ~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~g~i~~-~~G~LvAs~~Qegl~r 283 (286)
T PRK10526 226 IATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYT-QDGVLVASTVQEGVMR 283 (286)
T ss_pred EEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEEEEEEC-CCCCEEEEEEeeEEEE
Confidence 345667889999999999999999987653322223347898 9999999998876653
No 90
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=37.21 E-value=2.2e+02 Score=24.63 Aligned_cols=53 Identities=8% Similarity=-0.132 Sum_probs=36.3
Q ss_pred EEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEE-ECCCCcEEEEEEEEE
Q 019026 143 TARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILK-DYATGEVIGRATSKW 196 (347)
Q Consensus 143 V~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~-d~~~Gevia~a~S~w 196 (347)
-....|=|+++.+.+|-|.-.+............+=.++ + ++|+++|.+..+-
T Consensus 77 SlDHs~wFHrpfr~ddWlLY~~~sp~A~~~Rgl~~G~~f~~-q~G~Lvas~~QEG 130 (131)
T PF02551_consen 77 SLDHSMWFHRPFRADDWLLYAIESPSASGGRGLVRGRFFDT-QDGELVASVVQEG 130 (131)
T ss_dssp EEEEEEEE-S--BTTS-EEEEEEEEEEETTEEEEEECCEEE-CTTEEEEEEEEEE
T ss_pred ecceeEEEcCCCCCCCCEEEEEEcCccccCcccccCceEec-CCCCEEEEEecCC
Confidence 666778899999999999999887665444444445667 5 8999999977653
No 91
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=36.50 E-value=2.8e+02 Score=23.92 Aligned_cols=29 Identities=7% Similarity=-0.306 Sum_probs=24.3
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeee
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSE 169 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~ 169 (347)
+.+...+++|.+|...||+|+++..+...
T Consensus 85 ~~~g~~~~rF~~PV~~GDtl~~~~~V~~~ 113 (149)
T cd03450 85 VNYGLDKVRFPAPVPVGSRVRGRFTLLSV 113 (149)
T ss_pred EEeeccEEEeCcceeCCcEEEEEEEEEEE
Confidence 44455689999999999999999998875
No 92
>PLN02868 acyl-CoA thioesterase family protein
Probab=35.66 E-value=1.1e+02 Score=30.76 Aligned_cols=56 Identities=11% Similarity=-0.058 Sum_probs=47.2
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019026 141 WVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWVM 198 (347)
Q Consensus 141 WVV~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wVl 198 (347)
..+..+++.|.++...+..|++++..-+-||.+..|.-..+ ++|++++.+...+..
T Consensus 181 ~~~~s~~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~--Q~g~~~~~~~~sf~~ 236 (413)
T PLN02868 181 KLVHSLHAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAI--QKGKVIFTLFASFQK 236 (413)
T ss_pred CCceEeeeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEE--ECCeeEEEEeecccc
Confidence 35678999999998888889999999999999999988887 689988887766543
No 93
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=29.15 E-value=3.6e+02 Score=22.93 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=33.8
Q ss_pred EEeEEEEeecCCCC-C----EEEEEEEEeee--CCeEEEEEEEEEECCCCcEEEEEEEE
Q 019026 144 ARMHIEIYKYPAWS-D----VVEIETWCQSE--GRIGTRRDWILKDYATGEVIGRATSK 195 (347)
Q Consensus 144 ~r~~Iei~r~p~~g-D----~V~I~Twv~~~--~r~~~~R~f~I~d~~~Gevia~a~S~ 195 (347)
.++.++|.+|...| | +|+++..+... ++-....+..+.+ ++++++++|...
T Consensus 81 ~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~ 138 (142)
T PRK13693 81 TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATT-GGKKIFGRAIAS 138 (142)
T ss_pred EEEEEEecccEECCCCccceEEEEEEEEEEeccCCcEEEEEEEEEE-CCcEEEEEEEEE
Confidence 46899999999864 3 88888888775 2334445555665 555556665543
No 94
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A.
Probab=25.07 E-value=4e+02 Score=24.61 Aligned_cols=57 Identities=14% Similarity=0.189 Sum_probs=41.9
Q ss_pred cCceEEEEEe-EEEEee-cCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEE
Q 019026 137 LHLIWVTARM-HIEIYK-YPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATS 194 (347)
Q Consensus 137 ~gl~WVV~r~-~Iei~r-~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S 194 (347)
.+..|+-+.+ .+.+.+ ++..++.+.+.+.....+.-.+..+..++| ++|+++++...
T Consensus 225 ~~~~~lP~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~v~d-~~G~~~~~~~g 283 (295)
T PF14765_consen 225 RGRVFLPVSIERIRIFRAPPPPGDRLYVYARLVKSDDDTITGDVTVFD-EDGRVVAELEG 283 (295)
T ss_dssp TTSEEEEEEEEEEEESSS--SSTSEEEEEEEEESTTTTEEEEEEEEEE-TTSBEEEEEEE
T ss_pred CCCEEcccEeCEEEEEeccCCCCCEEEEEEEEecccceEEEEEEEEEC-CCCCEEEEEcc
Confidence 3445555554 466674 567899999999997777667778899999 99999987665
No 95
>PHA02582 10 baseplate wedge subunit and tail pin; Provisional
Probab=23.79 E-value=1.4e+02 Score=31.66 Aligned_cols=70 Identities=13% Similarity=0.024 Sum_probs=48.9
Q ss_pred eEEEEEeEEEEeecCCCCCEEEEEEEEeee---CCeEEEEEEEEEECCCCcEEEEEEEEEEEEeCCCCceecCC
Q 019026 140 IWVTARMHIEIYKYPAWSDVVEIETWCQSE---GRIGTRRDWILKDYATGEVIGRATSKWVMMNQDTRRLQKVS 210 (347)
Q Consensus 140 ~WVV~r~~Iei~r~p~~gD~V~I~Twv~~~---~r~~~~R~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrlp 210 (347)
.-.+--..|+++.|...||+|.|.|+..++ ..++..|...++| ..-.-.-+.-..-.+-|+.|++-+.+.
T Consensus 220 l~~LdG~~Irlr~pc~~gDtv~i~ty~dgia~~RSsY~~~~i~v~d-~~~t~~~s~pG~~~v~dl~t~~~~t~~ 292 (604)
T PHA02582 220 LVPLDGKSIRLRQPCNAGDTVQIVTYMDGIASWRSSYNRRTIRVYD-TKLTTKTSVPGEIWVGDLSTKKSFTFA 292 (604)
T ss_pred eeccCCceeEeecccCCCCeEEEEEeecchhhhhhhheeeeEEEEe-cCcccccccCCcEEEeeccccccccHH
Confidence 345555789999999999999999999886 4556667778888 433333333333345699998876543
No 96
>PLN02868 acyl-CoA thioesterase family protein
Probab=21.96 E-value=2.3e+02 Score=28.53 Aligned_cols=54 Identities=7% Similarity=-0.111 Sum_probs=42.0
Q ss_pred EEEeEEEEeecCCCCCEEEEEEEEeeeCCeEEEEEEEEEECCCCcEEEEEEEEEE
Q 019026 143 TARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDYATGEVIGRATSKWV 197 (347)
Q Consensus 143 V~r~~Iei~r~p~~gD~V~I~Twv~~~~r~~~~R~f~I~d~~~Gevia~a~S~wV 197 (347)
-..+.|.|+++...+|-+..+++....+.-+..-.=.|++ ++|+++|.+...-+
T Consensus 359 SLdhsi~Fh~~~~~d~W~l~~~~s~~a~~gr~~~~g~l~~-~~G~LvAs~~Qe~l 412 (413)
T PLN02868 359 SLDHSMWFHRPFRADDWLLFVIVSPAAHNGRGFATGHMFN-RKGELVVSLTQEAL 412 (413)
T ss_pred EcceeEEEecCCCCCceEEEEEECCccCCCcceEEEEEEC-CCCCEEEEEEeeec
Confidence 3447899999998999999999988874444434467888 99999999876543
No 97
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=21.53 E-value=5.4e+02 Score=22.36 Aligned_cols=88 Identities=17% Similarity=0.157 Sum_probs=52.6
Q ss_pred CCCCCCccCHHHHHHHHHHHHHHHH----HHcCCCCCCccchhHhhhcCceEEEEEeEEEEeecCCCCCEEEEEEEEe--
Q 019026 94 EVGINKTATVETIANLLQEVGCNHA----QSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQ-- 167 (347)
Q Consensus 94 D~D~~G~v~~~~yl~~~qeaa~~h~----~~lG~~~~~~~~t~~m~~~gl~WVV~r~~Iei~r~p~~gD~V~I~Twv~-- 167 (347)
.++..|.+.=..+...+--+++..+ .+.|+. ---||.+.+|+|.+|.. +| ++..+...
T Consensus 39 N~N~~~T~FgGSl~slatLaGW~lv~l~l~e~~~~--------------~~IVi~~~~i~Y~~Pv~-~d-~~A~~~~~~~ 102 (144)
T PF09500_consen 39 NINHHGTMFGGSLYSLATLAGWGLVWLQLKEAGLN--------------GDIVIADSNIRYLKPVT-GD-FTARCSLPEP 102 (144)
T ss_dssp GB-TTSSB-HHHHHHHHHHHHHHHHHHHHHHHT-----------------EEEEEEEEEEE-S----S---EEEEE----
T ss_pred CcCCCCCcchHHHHHHHHHHHHHHHHHHHHHhCCC--------------CcEEEEeCceEEcCCCC-CC-cEEEEecccc
Confidence 3455677777777777777665543 344443 34699999999998885 44 44444443
Q ss_pred -----------eeCCeEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019026 168 -----------SEGRIGTRRDWILKDYATGEVIGRATSKWVMM 199 (347)
Q Consensus 168 -----------~~~r~~~~R~f~I~d~~~Gevia~a~S~wVlv 199 (347)
.-+|..+.-.-.|++ +|+++++-+..+|.+
T Consensus 103 ~~~~~~~~~l~~~grari~l~~~i~~--~~~~~a~f~G~yv~l 143 (144)
T PF09500_consen 103 EDWERFLQTLARGGRARITLEVEIYS--GGELAAEFTGRYVAL 143 (144)
T ss_dssp ---S---GGGGCTS-EEEEEEEEEEE--TTEEEEEEEEEEEEE
T ss_pred chhHHHHHHHHcCCcEEEEEEEEEEE--CCEEEEEEEEEEEEE
Confidence 126777777778886 888899999988875
No 98
>PF11456 DUF3019: Protein of unknown function (DUF3019); InterPro: IPR021559 This is a bacterial family of uncharacterised proteins.
Probab=21.25 E-value=2.5e+02 Score=22.99 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=23.3
Q ss_pred EEEEEECCCCcEEEEEEEEEEEEeCCCCceecC
Q 019026 177 DWILKDYATGEVIGRATSKWVMMNQDTRRLQKV 209 (347)
Q Consensus 177 ~f~I~d~~~Gevia~a~S~wVlvDl~trRpvrl 209 (347)
.|.|+|..++..+|.+...-..+..++||-.+.
T Consensus 66 ~f~L~~~~~~~~la~~~v~V~~~~~k~Rrr~r~ 98 (102)
T PF11456_consen 66 QFSLRDSDTGQPLAQVKVKVTWVSPKVRRRRRN 98 (102)
T ss_pred EEEEEeCCCCcEEEEEEEEEEEeccCcCCccCC
Confidence 477888777888987777777775666665443
No 99
>PF10648 Gmad2: Immunoglobulin-like domain of bacterial spore germination; InterPro: IPR018911 This domain is found linked to IPR019606 from INTERPRO in some bacterial proteins. It is predicted to contain an immunoglobulin-like all-beta fold.
Probab=20.95 E-value=2.3e+02 Score=22.45 Aligned_cols=43 Identities=19% Similarity=0.197 Sum_probs=29.7
Q ss_pred ecCCCCCEEEEEEEEeeeC-CeEEEEEEEEEECCCCcEEEEEEEE
Q 019026 152 KYPAWSDVVEIETWCQSEG-RIGTRRDWILKDYATGEVIGRATSK 195 (347)
Q Consensus 152 r~p~~gD~V~I~Twv~~~~-r~~~~R~f~I~d~~~Gevia~a~S~ 195 (347)
..|..|+.|.=...+.+.. -+-....++|.| .+|++++++.++
T Consensus 6 ~~P~pg~~V~sp~~V~G~A~~FEgtv~~rv~D-~~g~vl~e~~~~ 49 (88)
T PF10648_consen 6 TAPAPGDTVSSPVKVSGKARVFEGTVNIRVRD-GHGEVLAEGFVT 49 (88)
T ss_pred cCCCCcCCcCCCEEEEEEEEEeeeEEEEEEEc-CCCcEEEEeeEE
Confidence 3566777777766666653 333456788999 999999776654
No 100
>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]
Probab=20.75 E-value=8.8e+02 Score=24.49 Aligned_cols=199 Identities=13% Similarity=0.060 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccchhHhhhcCceEEEEEeE-EEEeecCCCCC-EEEEEEEEeeeCCeEEEEEEEEE-
Q 019026 105 TIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMH-IEIYKYPAWSD-VVEIETWCQSEGRIGTRRDWILK- 181 (347)
Q Consensus 105 ~yl~~~qeaa~~h~~~lG~~~~~~~~t~~m~~~gl~WVV~r~~-Iei~r~p~~gD-~V~I~Twv~~~~r~~~~R~f~I~- 181 (347)
.+..|++++.....-..-...+. ....-...|..+.+ |+|.+++.-|+ .+.+.-.++-.++.++.-.-.+.
T Consensus 31 rigk~lE~ld~~a~~~hc~~~~~------~~~~p~~~VtAsV~~i~f~~~~~~~~~d~i~~a~Vt~a~~sSMEv~i~V~q 104 (357)
T KOG2763|consen 31 RIGKILEDLDALAVYRHCSEAEE------GATLPRTIVTASVDRIDFEKPSEVGQVDIIIVAKVTWAGKSSMEVSIYVMQ 104 (357)
T ss_pred HHHHHHHHhhhhhheeecccccc------cCccceEEEEeeEEEEEeeccccccceeEEEEEEEEeccccceEEEEEEEE
Confidence 89999999873222100110010 11112556666654 78888888884 44444556666777765433333
Q ss_pred -ECC--CCcEEEEEEEEEEEEeCCCCceecCCHHHHH------HHhhcCc-ccccccCCccC-----cc------ccccC
Q 019026 182 -DYA--TGEVIGRATSKWVMMNQDTRRLQKVSDDVRE------EYLVFCP-RELRLAFPEEN-----SS------SSRKI 240 (347)
Q Consensus 182 -d~~--~Gevia~a~S~wVlvDl~trRpvrlp~el~e------~~~~~~p-~~~~l~~p~~~-----~~------~~~ki 240 (347)
|-. .-.++-.|..++|--|..++ +++++.-.-+ .|..... ...|+..+... +. .+..+
T Consensus 105 ~~~~~~~~~~~~kA~f~fVard~~~~-~~~l~~l~p~te~e~~~~~~aeer~k~R~~~~~~~~~~~~~~~l~~~~~~~d~ 183 (357)
T KOG2763|consen 105 EDLATGEKSLVLKATFTFVARDATNG-KAPLNGLTPETEDEKVLYREAEERNKVRKVSEDISSCKQLEEELAERWVPGDM 183 (357)
T ss_pred ehhccchhhheeeeEEEEEEecCCCC-ccccCCccCCCCccceehhhHHHhhhhhccccccchhHHHHHHhhcccccCCc
Confidence 212 33567799999999998888 6666542110 0000000 00111111100 00 00011
Q ss_pred CCC-CCc----ccc--cccceecccCCCCCCCccchhHHHHHHHHHhhHh---Hhhcc-ceEEEEE-E-eecCCCCCEEE
Q 019026 241 SKL-EDP----AQY--SRLGLIPRRADLDMNQHVNNVTYIGWLLEVSTMR---MATKL-FLAFLFL-P-NRNCYISTTLK 307 (347)
Q Consensus 241 ~k~-~~p----~~~--~~~~~~vr~sDiD~n~HVNN~~Y~~w~~d~lp~e---~~~~~-~l~~i~I-~-~~E~~~gd~v~ 307 (347)
+.+ ..+ ... ......+...+-..+|-+.=..-.+|+++....- +...+ .+++++. + .+++.-|+.+.
T Consensus 184 ~~lv~~~~~~~m~dT~v~sseI~~P~~~N~~G~iFGGflMrka~ElA~~~A~~f~~~~p~~rsVD~i~F~~pVdvG~~L~ 263 (357)
T KOG2763|consen 184 VALVLSPKMVWMKDTKVSSSEICQPEHRNIHGTIFGGFLMRKALELAEITAKLFCKGRPATRSVDDIEFQKPVDVGCVLT 263 (357)
T ss_pred eeeecCCcceEeeccceeEEEeecCcccCccCceehHHHHHHHHHHHHHHHHHHcCCCceEEEechhhccCcceeeeEEE
Confidence 111 000 000 1122345667777788888888888888774321 11122 3566654 4 88888888876
Q ss_pred EEE
Q 019026 308 FFL 310 (347)
Q Consensus 308 v~t 310 (347)
+..
T Consensus 264 f~s 266 (357)
T KOG2763|consen 264 FSS 266 (357)
T ss_pred Eee
Confidence 643
Done!