Query 019027
Match_columns 347
No_of_seqs 206 out of 1229
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 09:45:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.8E-83 9.7E-88 612.9 28.3 328 3-335 5-347 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.5E-77 1.5E-81 561.1 27.2 289 42-332 5-308 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 6.6E-78 2.3E-82 567.5 20.9 296 42-344 2-306 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 1.6E-73 5.4E-78 536.3 18.2 278 42-334 3-306 (311)
5 1odm_A Isopenicillin N synthas 100.0 1.5E-72 5.3E-77 534.1 25.1 282 42-335 7-326 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 2.7E-68 9.2E-73 493.5 24.5 259 42-332 2-276 (280)
7 3dkq_A PKHD-type hydroxylase S 95.9 0.03 1E-06 49.7 9.0 105 173-295 73-194 (243)
8 2hbt_A EGL nine homolog 1; pro 95.3 0.42 1.4E-05 42.4 14.1 184 59-296 14-213 (247)
9 2rg4_A Uncharacterized protein 92.5 2.1 7.1E-05 37.0 12.6 43 244-298 166-209 (216)
10 3itq_A Prolyl 4-hydroxylase, a 84.1 4.1 0.00014 35.1 8.4 104 174-296 94-212 (216)
11 2jig_A Prolyl-4 hydroxylase; h 83.3 3.5 0.00012 35.5 7.7 88 200-297 99-218 (224)
12 3s57_A Alpha-ketoglutarate-dep 82.8 3.9 0.00013 34.8 7.7 81 199-293 100-200 (204)
13 2iuw_A Alkylated repair protei 81.0 4 0.00014 35.7 7.3 85 199-295 126-229 (238)
14 3tht_A Alkylated DNA repair pr 70.0 4.7 0.00016 37.4 4.8 106 198-311 197-327 (345)
15 3i3q_A Alpha-ketoglutarate-dep 67.4 8.5 0.00029 33.0 5.6 80 199-294 105-201 (211)
16 2dbn_A Hypothetical protein YB 64.5 2.4 8E-05 40.7 1.6 53 42-98 99-151 (461)
17 3o2g_A Gamma-butyrobetaine dio 58.9 4.6 0.00016 38.0 2.5 52 43-99 122-173 (388)
18 4ay7_A Methylcobalamin\: coenz 58.0 18 0.0006 33.2 6.4 45 54-98 300-348 (348)
19 2opi_A L-fuculose-1-phosphate 52.1 8 0.00027 33.0 2.7 36 43-81 125-160 (212)
20 1e4c_P L-fuculose 1-phosphate 45.9 11 0.00038 32.1 2.6 36 43-81 122-157 (215)
21 1otj_A Alpha-ketoglutarate-dep 43.7 19 0.00064 31.8 3.9 51 42-98 16-66 (283)
22 2fk5_A Fuculose-1-phosphate al 42.7 13 0.00045 31.3 2.6 37 42-81 116-153 (200)
23 1pvt_A Sugar-phosphate aldolas 42.5 16 0.00056 31.5 3.3 37 42-81 160-196 (238)
24 3kt7_A PKHD-type hydroxylase T 40.5 64 0.0022 32.1 7.3 105 173-298 104-231 (633)
25 2irp_A Putative aldolase class 38.8 14 0.00047 31.3 2.1 35 43-81 139-176 (208)
26 1oih_A Putative alkylsulfatase 35.8 28 0.00097 31.0 3.8 52 42-99 26-78 (301)
27 3ocr_A Class II aldolase/adduc 35.0 22 0.00076 31.6 2.9 38 42-81 155-192 (273)
28 2v9l_A Rhamnulose-1-phosphate 34.9 17 0.0006 32.2 2.2 36 43-81 179-214 (274)
29 1m5a_B Insulin B chain; alpha 34.7 41 0.0014 19.2 2.9 19 58-76 9-27 (30)
30 2da7_A Zinc finger homeobox pr 32.5 22 0.00074 24.8 1.9 42 155-196 14-55 (71)
31 3pvj_A Alpha-ketoglutarate-dep 28.3 39 0.0013 29.9 3.4 51 42-98 14-64 (277)
32 2ww6_A Fibritin, T4 fibritin; 27.4 39 0.0013 18.6 1.9 13 238-250 12-24 (27)
33 3ghf_A Septum site-determining 24.7 40 0.0014 25.9 2.4 36 46-84 51-86 (120)
34 3r1j_A Alpha-ketoglutarate-dep 24.3 55 0.0019 29.3 3.6 52 42-99 20-72 (301)
35 1e5r_A Proline oxidase; oxidor 23.7 66 0.0023 28.8 3.9 63 217-294 103-175 (290)
36 2x4k_A 4-oxalocrotonate tautom 22.1 77 0.0026 20.2 3.2 24 166-189 17-40 (63)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.8e-83 Score=612.92 Aligned_cols=328 Identities=31% Similarity=0.587 Sum_probs=296.0
Q ss_pred hhHHHHHHcCccCcCCCCCCcccCCCCCCCCCcc---cC---CCCCCCceEeCCCCCCC---ChHHHHHHHHHHhhcccE
Q 019027 3 AATTKLLLSDLASTVKSVPSNYIRPISDRPNLTE---VQ---ISDGSIPLVDLQVLNGP---SRLDTIKQIGQACQHDGF 73 (347)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~---~~~~~iPvIDl~~l~~~---~~~~~~~~l~~A~~~~Gf 73 (347)
++||+|+++|+ ++||++|++|+++++.... .. .. .+||||||+.+.++ .+.+++++|.+||++|||
T Consensus 5 ~~v~~l~~~~~----~~vP~~~~~p~~~~~~~~~~~~~~~~~~~-~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GF 79 (356)
T 1gp6_A 5 ERVESLAKSGI----ISIPKEYIRPKEELESINDVFLEEKKEDG-PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGV 79 (356)
T ss_dssp CCHHHHHHTTC----SSCCGGGSCCHHHHTTCCCHHHHHHCCCS-CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSE
T ss_pred ccHHHHHhcCC----CCCCHHhcCCchhcccccccccccccccC-CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCE
Confidence 57999999996 8999999999887775321 00 12 46999999998754 356789999999999999
Q ss_pred EEEEccCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC-CCCCCCccccccCCCccccccccccccccCCccc-CCCCC
Q 019027 74 FQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDP-SKSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDY-MHEWP 151 (347)
Q Consensus 74 f~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~-~n~wP 151 (347)
|||+||||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|+|.++..|.... +|.||
T Consensus 80 F~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP 159 (356)
T 1gp6_A 80 MHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 159 (356)
T ss_dssp EEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCC
Confidence 999999999999999999999999999999999987654 4688997654444556789999999987664323 68999
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhc---CcccceEEeecCCCCCCCCCcccCCccCCCceE
Q 019027 152 SNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALG---KHGQHMALNYYPPCPQPDLTYGLPGHTDPNLIT 228 (347)
Q Consensus 152 ~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~f~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lT 228 (347)
+.+++||+.+++|++.|.+|+.+||++|+++||+++++|.+.+. .+.+.||++|||||+.++..+|+++|||+|+||
T Consensus 160 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lT 239 (356)
T 1gp6_A 160 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT 239 (356)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEE
Confidence 99999999999999999999999999999999999999999987 467789999999999988899999999999999
Q ss_pred EEecCCCCCceeeeCCeEEEccCCCCeEEEEeChhhHHhhCCcccCccccccCCCCCCeeEEeEeecCCCCc-eEecCCC
Q 019027 229 VLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDA-VIAPAKD 307 (347)
Q Consensus 229 lL~qd~~~GLqV~~~g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~~~~~~R~Si~~F~~P~~d~-~i~pl~~ 307 (347)
||+||+++||||+++|+|++|+|+||++|||+||+||+||||+||||.|||+.+++.+|||++||++|+.|+ +|.|+++
T Consensus 240 lL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~ 319 (356)
T 1gp6_A 240 FILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE 319 (356)
T ss_dssp EEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred EEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChh
Confidence 999999999999999999999999999999999999999999999999999998888999999999999999 9999999
Q ss_pred ccCCCCCCCCCCccHHHHHHHHHHccCC
Q 019027 308 LIDERHPAVYKNFTYAEYYQKFWNRGLD 335 (347)
Q Consensus 308 ~~~~~~p~~y~~~~~~d~~~~~~~~~~~ 335 (347)
|+++++|++|+++|++||+..+++++++
T Consensus 320 ~~~~~~p~~y~~~t~~eyl~~~~~~~~d 347 (356)
T 1gp6_A 320 MVSVESPAKFPPRTFAQHIEHKLFGKEQ 347 (356)
T ss_dssp GCCSSSCCSSCCEEHHHHHHHHHHHHHH
T ss_pred hcCCCCCccCCCccHHHHHHHHHHhccC
Confidence 9999999999999999999999888776
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4.5e-77 Score=561.08 Aligned_cols=289 Identities=25% Similarity=0.398 Sum_probs=258.3
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCCCCCCccc
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTS 121 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~ 121 (347)
.+||||||+.+.+ ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ....+||...
T Consensus 5 ~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~~ 82 (312)
T 3oox_A 5 SAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIPF 82 (312)
T ss_dssp CSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEECC
T ss_pred CCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCccccccc
Confidence 5799999998754 4788999999999999999999999999999999999999999999999999875 4568899432
Q ss_pred cc--cCCCcccccccccccccc-CCc------ccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 019027 122 FN--VNTEKISNWRDYLRLHCY-PLQ------DYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDK 192 (347)
Q Consensus 122 ~~--~~~~~~~d~~e~~~~~~~-p~~------~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~f~~ 192 (347)
.. .......||+|+|.++.. +.. ..+|.||+.+++||+.+++|+++|.+++.+|+++|+++||+++++|.+
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 162 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 11 122356899999988642 211 126899999999999999999999999999999999999999999999
Q ss_pred HhcCcccceEEeecCCCCCCCCCcccCCccCCCceEEEecCCCCCceee-eCCeEEEccCCCCeEEEEeChhhHHhhCCc
Q 019027 193 ALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVL-RNGKWLPVSPIPNTFIVNIGDQMQVLSNDR 271 (347)
Q Consensus 193 ~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~v~p~pg~~vVnvGd~l~~~TnG~ 271 (347)
.+..+.+.+|++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+||||+
T Consensus 163 ~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~ 242 (312)
T 3oox_A 163 TVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNV 242 (312)
T ss_dssp HHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTS
T ss_pred HhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCe
Confidence 9988888999999999987655599999999999999999999999997 899999999999999999999999999999
Q ss_pred ccCccccccCCC----CCCeeEEeEeecCCCCceEecCCCccCCCCCCCCC-CccHHHHHHHHHHc
Q 019027 272 YKSVLHRALVNC----DKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYK-NFTYAEYYQKFWNR 332 (347)
Q Consensus 272 ~~st~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~-~~~~~d~~~~~~~~ 332 (347)
||||.|||+.++ +.+||||+||++|+.|++|+|+++|+++++|++|+ ++|++||+..+++.
T Consensus 243 ~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 243 LPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp SCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred ecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 999999998763 46799999999999999999999999999999999 99999999999864
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=6.6e-78 Score=567.46 Aligned_cols=296 Identities=32% Similarity=0.659 Sum_probs=262.7
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCCCCCCccc
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTS 121 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~ 121 (347)
++||||||+.+...++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+..
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc
Confidence 469999999986446788999999999999999999999999999999999999999999999997643 3477533
Q ss_pred cccCCCccccccccccccccCCcccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcC---cc
Q 019027 122 FNVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGK---HG 198 (347)
Q Consensus 122 ~~~~~~~~~d~~e~~~~~~~p~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~f~~~~~~---~~ 198 (347)
. ...+..||+|+|.++..|.. .+|.||+.+++||+.+++|++.|.+++.+|+++|+++||+++++|.+.+.. +.
T Consensus 78 ~--~e~~~~d~ke~~~~~~~p~~-~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~ 154 (319)
T 1w9y_A 78 Q--AEVTDMDWESTFFLKHLPIS-NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPN 154 (319)
T ss_dssp C--CCGGGCCCCEEEEEEEESCC-GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCE
T ss_pred c--ccCCCCChhhheeeecCCcc-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCcc
Confidence 1 22356799999998776643 268999999999999999999999999999999999999999999998863 55
Q ss_pred cceEEeecCCCCCCCCCcccCCccCCCceEEEecC-CCCCceeeeCCeEEEccCCCCeEEEEeChhhHHhhCCcccCccc
Q 019027 199 QHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQD-DVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLH 277 (347)
Q Consensus 199 ~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~H 277 (347)
+.+|++|||||+.++...|+++|||+|+||||+|| +++||||+++|+|++|+|+||++|||+||+||+||||+||||.|
T Consensus 155 ~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~H 234 (319)
T 1w9y_A 155 FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMH 234 (319)
T ss_dssp EEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCE
T ss_pred ceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccc
Confidence 68999999999988888999999999999999995 79999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCeeEEeEeecCCCCceEecCCCccCCC---CCCCCCCccHHHHHHHHHHccCC-ccc-cccccc
Q 019027 278 RALVNCDKERISIPTFYCPSPDAVIAPAKDLIDER---HPAVYKNFTYAEYYQKFWNRGLD-ERC-LDLFKA 344 (347)
Q Consensus 278 RV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~p~~y~~~~~~d~~~~~~~~~~~-~~~-l~~~~~ 344 (347)
||+.+++++|||++||++|+.|++|.|+++|++++ +|++|++++++||++.++++++. +.. ++.+||
T Consensus 235 RVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 235 RVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp EECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred eecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 99998888999999999999999999999999887 59999999999999999988887 543 676664
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.6e-73 Score=536.33 Aligned_cols=278 Identities=15% Similarity=0.224 Sum_probs=238.8
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhCCC-HHHHhhcCCCCCCCCCCCcc
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSP-ESERLKSYSDDPSKSTRLST 120 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~Gy~~ 120 (347)
.+||||||+.+.+++.. ++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++........+||+.
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 57999999987554222 399999999999999999999999999999999999999 99999998876556899964
Q ss_pred cccc------CCCccccccccccccccCCcccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CHHHH
Q 019027 121 SFNV------NTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGL----QRDFI 190 (347)
Q Consensus 121 ~~~~------~~~~~~d~~e~~~~~~~p~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl----~~~~f 190 (347)
.... ...+..||+|+|.++.. +|.|| +++||+.+++|++.|.+++.+|+++|+++||+ ++++|
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~~~-----~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f 152 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMGTA-----DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAF 152 (311)
T ss_dssp C-----------------CEEEEECSS-----SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHH
T ss_pred ccccccccccCCCCCCCcceeeeccCC-----CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHH
Confidence 3322 22457899999998654 58999 89999999999999999999999999999999 88998
Q ss_pred HHHhcCcccceEEeecCCCCCCC--C--CcccCCccCCCceEEEecC-CCCC---ceeeeCCeEEEccCCCCeEEEEeCh
Q 019027 191 DKALGKHGQHMALNYYPPCPQPD--L--TYGLPGHTDPNLITVLLQD-DVPG---LQVLRNGKWLPVSPIPNTFIVNIGD 262 (347)
Q Consensus 191 ~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~qd-~~~G---LqV~~~g~W~~v~p~pg~~vVnvGd 262 (347)
.+. .+.+|++|||||+.++ + .+|+++|||+|+||||+|| +++| |||+.+|+|++|+|+||++||||||
T Consensus 153 ~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD 228 (311)
T 1dcs_A 153 LDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGA 228 (311)
T ss_dssp HSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECH
T ss_pred hhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHH
Confidence 765 6789999999998763 3 6789999999999999999 8999 9999999999999999999999999
Q ss_pred hhHHhhCCcccCccccccCCC-----CCCeeEEeEeecCCCCceEecCCCccCCCCCCCC--CCccHHHHHHHHHHccC
Q 019027 263 QMQVLSNDRYKSVLHRALVNC-----DKERISIPTFYCPSPDAVIAPAKDLIDERHPAVY--KNFTYAEYYQKFWNRGL 334 (347)
Q Consensus 263 ~l~~~TnG~~~st~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y--~~~~~~d~~~~~~~~~~ 334 (347)
+||+||||+||||.|||+.++ +++||||+||++|+.|++|. +++++++++|++| +++|++||++.++++.+
T Consensus 229 ~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 229 IATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 999999999999999999876 67899999999999999999 9999988899999 99999999988876654
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.5e-72 Score=534.14 Aligned_cols=282 Identities=24% Similarity=0.384 Sum_probs=251.7
Q ss_pred CCCceEeCCCCCCC---ChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHh-hCCCHHHHhhcCCCCCCCCCC
Q 019027 42 GSIPLVDLQVLNGP---SRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAF-FKSPESERLKSYSDDPSKSTR 117 (347)
Q Consensus 42 ~~iPvIDl~~l~~~---~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~~G 117 (347)
.+||||||+.|.++ .+.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +|
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~G 77 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------RA 77 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------TT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------cC
Confidence 57999999998654 35678999999999999999999999 899999999999 9999999999875 45
Q ss_pred Cccccc--cCC------CccccccccccccccCC-----------cccCCCCCCC--CCchHHHHHHHHHHHHHHHHHHH
Q 019027 118 LSTSFN--VNT------EKISNWRDYLRLHCYPL-----------QDYMHEWPSN--PPSFREVVAEYCTSVRGLVLRLL 176 (347)
Q Consensus 118 y~~~~~--~~~------~~~~d~~e~~~~~~~p~-----------~~~~n~wP~~--~~~fr~~~~~y~~~~~~la~~ll 176 (347)
|..... ... ....||+|+|.++.... ...+|.||+. +++||+.+++|++.|.+++.+|+
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll 157 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL 157 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 532111 111 24679999999875321 0127999987 89999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHhcCcccceE--EeecC------C---CCCCCC-CcccCCccCCCceEEEecCCCCCceee-eC
Q 019027 177 EAISESLGLQRDFIDKALGKHGQHMA--LNYYP------P---CPQPDL-TYGLPGHTDPNLITVLLQDDVPGLQVL-RN 243 (347)
Q Consensus 177 ~~l~~~Lgl~~~~f~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~ 243 (347)
++|+++||+++++|.+.++.+.+.+| ++||| | |++++. .+|+++|||+|+||||+||+++||||+ ++
T Consensus 158 ~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~ 237 (331)
T 1odm_A 158 KGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAA 237 (331)
T ss_dssp HHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETT
T ss_pred HHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcCC
Confidence 99999999999999999988888999 99999 7 777766 899999999999999999999999999 88
Q ss_pred CeEEEccCCCCeEEEEeChhhHHhhCCcccCccccccCCCCCCeeEEeEeecCCCCceEecCCCccCCCCCCCCCCccHH
Q 019027 244 GKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYA 323 (347)
Q Consensus 244 g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~~~~~~ 323 (347)
| |++|+|+||++|||+||+||+||||+||||.|||+.+ +.+|||++||++|+.|++|.|+++++++++ ++|++++++
T Consensus 238 g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~ 314 (331)
T 1odm_A 238 G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYG 314 (331)
T ss_dssp E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHH
T ss_pred C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHH
Confidence 8 9999999999999999999999999999999999864 789999999999999999999999998877 899999999
Q ss_pred HHHHHHHHccCC
Q 019027 324 EYYQKFWNRGLD 335 (347)
Q Consensus 324 d~~~~~~~~~~~ 335 (347)
||++.+++++++
T Consensus 315 e~l~~~~~~~~~ 326 (331)
T 1odm_A 315 DYLQNGLVSLIN 326 (331)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987765
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2.7e-68 Score=493.52 Aligned_cols=259 Identities=25% Similarity=0.414 Sum_probs=223.9
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCCCCCCccc
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTS 121 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~ 121 (347)
++||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++.... ...+||...
T Consensus 2 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~-~~~~GY~~~ 72 (280)
T 3on7_A 2 MKLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR-ETHDGFFPA 72 (280)
T ss_dssp --CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT-TTCCEEECC
T ss_pred CCCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC-CCCCccccC
Confidence 57999999973 36899999999999999999999999999999999999997 7999987653 568999543
Q ss_pred c---ccCCCccccccccccccccCCcccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH--HH---HHHH
Q 019027 122 F---NVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQR--DF---IDKA 193 (347)
Q Consensus 122 ~---~~~~~~~~d~~e~~~~~~~p~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~--~~---f~~~ 193 (347)
. ........||+|+|.+. .||..+++||+.+++|+++|.+++.+||++|+++||++. ++ |.+.
T Consensus 73 ~~~e~~~~~~~~D~kE~~~~~---------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~ 143 (280)
T 3on7_A 73 SISETAKGHTVKDIKEYYHVY---------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEM 143 (280)
T ss_dssp C--------CCCCSCEEEEEC---------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHH
T ss_pred ccccccCCCCcccHHHHHhcC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHH
Confidence 2 11223467999998872 477778899999999999999999999999999999763 22 5666
Q ss_pred hcCcc-cceEEeecCCCCCCC--CCcccCCccCCCceEEEecCCCCCceee-eCCeEEEccCCCCeEEEEeChhhHHhhC
Q 019027 194 LGKHG-QHMALNYYPPCPQPD--LTYGLPGHTDPNLITVLLQDDVPGLQVL-RNGKWLPVSPIPNTFIVNIGDQMQVLSN 269 (347)
Q Consensus 194 ~~~~~-~~lr~~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~v~p~pg~~vVnvGd~l~~~Tn 269 (347)
+..+. +.+|++|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+||+|||
T Consensus 144 ~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 223 (280)
T 3on7_A 144 IANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASD 223 (280)
T ss_dssp HTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTT
T ss_pred hcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhC
Confidence 66654 789999999998754 4789999999999999999999999999 7999999999999999999999999999
Q ss_pred CcccCccccccCCC----CCCeeEEeEeecCCCCceEecCCCccCCCCCCCCCCccHHHHHHHHHHc
Q 019027 270 DRYKSVLHRALVNC----DKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNR 332 (347)
Q Consensus 270 G~~~st~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~~~~~~d~~~~~~~~ 332 (347)
|+||||.|||+.++ ..+|||++||++|+.|++|.| ++|++||+.+|++.
T Consensus 224 g~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 224 GYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp TSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred CcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 99999999999863 458999999999999999974 69999999999864
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.93 E-value=0.03 Score=49.73 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=64.9
Q ss_pred HHHHHHHHHHcCCCHHHHHHHhcCcccceEEeecCCCCCCCCCcccCCccCCC-----------ceEEEec--C----CC
Q 019027 173 LRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPN-----------LITVLLQ--D----DV 235 (347)
Q Consensus 173 ~~ll~~l~~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d----~~ 235 (347)
..|.+.|..+|+..+.++...+.....-+++++|.+-. -..+|.|.. .+|+++. | +.
T Consensus 73 ~~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~G 146 (243)
T 3dkq_A 73 VALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQG 146 (243)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEE
T ss_pred HHHHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCC
Confidence 34444455555555444433333333458899997632 246677753 4566554 3 12
Q ss_pred CCceeeeCCeEEEccCCCCeEEEEeChhhHHhhCCcccCccccccCCCCCCeeEEeEeec
Q 019027 236 PGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYC 295 (347)
Q Consensus 236 ~GLqV~~~g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~~~~~~R~Si~~F~~ 295 (347)
|.|.+.....=..|.|..|.+|+.-. .++|+|..-....|++++.+++
T Consensus 147 Getvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 147 GELVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp CCEEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ceEEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 44666554445789999999998743 3689997544568999999886
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.30 E-value=0.42 Score=42.38 Aligned_cols=184 Identities=15% Similarity=0.204 Sum_probs=98.8
Q ss_pred HHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCCCCCCccccccCCCcccccc-cccc
Q 019027 59 DTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFNVNTEKISNWR-DYLR 137 (347)
Q Consensus 59 ~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~-e~~~ 137 (347)
...+.+.+++.+.|++++.|- ++++.++.+.+.++..-.. -.+.. +..|-+ . .....+.+ +.+
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~~-----g~~~~----a~i~~~-~----~~~~~~iR~d~i- 77 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHDT-----GKFTD----GQLVSQ-K----SDSSKDIRGDKI- 77 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHHT-----TCSCS----CCEEEC-C----SSSTTCEECCEE-
T ss_pred hhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhhc-----CCccc----cccccc-c----ccccccccccce-
Confidence 345678899999999887665 8999999999988874310 00000 001000 0 00000111 111
Q ss_pred ccccCCcccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccceEEeecCCCCCCCCCcc
Q 019027 138 LHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYG 217 (347)
Q Consensus 138 ~~~~p~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~g 217 (347)
.|-+......+.+..|.+.|.++.. .+...+|+.. .. ...-+.+.+|++. .-.
T Consensus 78 -----------~wl~~~~~~~~~~~~l~~~i~~l~~----~ln~~lGl~~------i~-~~~e~~~~~Y~~~-----G~~ 130 (247)
T 2hbt_A 78 -----------TWIEGKEPGCETIGLLMSSMDDLIR----HCNGKLGSYK------IN-GRTKAMVACYPGN-----GTG 130 (247)
T ss_dssp -----------EEECSCSTTCHHHHHHHHHHHHHHH----HTTTTSTTCC------EE-EECCEEEEEECSS-----SCC
T ss_pred -----------eeecccccchhHHHHHHHHHHHHHH----HHhhhcCccc------cc-ccceEEEEEecCC-----CCc
Confidence 1111100111223345555544433 2222233320 00 1233678899851 123
Q ss_pred cCCccCCC-----ceEEEec--C------CCCCceeeeCC--eEEEccCCCCeEEEEeChhhHHhhCCcccCccccccCC
Q 019027 218 LPGHTDPN-----LITVLLQ--D------DVPGLQVLRNG--KWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVN 282 (347)
Q Consensus 218 ~~~HtD~g-----~lTlL~q--d------~~~GLqV~~~g--~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~~ 282 (347)
...|.|.. .+|+++. + ..|.|.+...+ ....|.|..|.+|+.-.+. -.+|.|..
T Consensus 131 y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p- 199 (247)
T 2hbt_A 131 YVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP- 199 (247)
T ss_dssp EEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-
T ss_pred ccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-
Confidence 56677762 5777765 2 13446777544 6789999999999886431 15899965
Q ss_pred CCCCeeEEeEeecC
Q 019027 283 CDKERISIPTFYCP 296 (347)
Q Consensus 283 ~~~~R~Si~~F~~P 296 (347)
..+.|+||+.++.-
T Consensus 200 ~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 200 AYATRYAITVWYFD 213 (247)
T ss_dssp BSSCEEEEEEEEEE
T ss_pred CCCEEEEEEEEEcC
Confidence 46799999886653
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.47 E-value=2.1 Score=36.96 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=33.3
Q ss_pred CeEEEccCCCCeEEEEeChhhHHhhCCcccCccccccCCC-CCCeeEEeEeecCCC
Q 019027 244 GKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNC-DKERISIPTFYCPSP 298 (347)
Q Consensus 244 g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~~~-~~~R~Si~~F~~P~~ 298 (347)
..+..|.|.+|.+||.-.. ..|.|.... ..+|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4667899999999988764 369998643 468999999988765
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=84.14 E-value=4.1 Score=35.13 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=60.6
Q ss_pred HHHHHHHHHcCCCHHHHHHHhcCcccceEEeecCCCCCCCCCcccCCccCCC-----------ceEEEec--C-CCCCce
Q 019027 174 RLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPN-----------LITVLLQ--D-DVPGLQ 239 (347)
Q Consensus 174 ~ll~~l~~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~~GLq 239 (347)
.|.+-|+..+|++.+ ....+++++|.+... ..+|.|+. .+|+++. | ..||=-
T Consensus 94 ~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 344444445677531 123588999976321 35677753 3777765 2 223433
Q ss_pred eeeCCeEEEccCCCCeEEEEeChhhHHhhCCc-ccCccccccCCCCCCeeEEeEeecC
Q 019027 240 VLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDR-YKSVLHRALVNCDKERISIPTFYCP 296 (347)
Q Consensus 240 V~~~g~W~~v~p~pg~~vVnvGd~l~~~TnG~-~~st~HRV~~~~~~~R~Si~~F~~P 296 (347)
+.++. =+.|.|..|.+|+.-.- ..+|. -..++|+|.......|+++..+++-
T Consensus 160 ~Fp~~-~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 160 FFPKL-NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp EETTT-TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred EecCC-CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 33322 26789999998876531 11222 2467999975445689999888753
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=83.28 E-value=3.5 Score=35.47 Aligned_cols=88 Identities=15% Similarity=0.185 Sum_probs=54.3
Q ss_pred ceEEeecCCCCCCCCCcccCCccCC--------------CceEEEec--C-CCCC-ceeeeCC-------------eEEE
Q 019027 200 HMALNYYPPCPQPDLTYGLPGHTDP--------------NLITVLLQ--D-DVPG-LQVLRNG-------------KWLP 248 (347)
Q Consensus 200 ~lr~~~Yp~~~~~~~~~g~~~HtD~--------------g~lTlL~q--d-~~~G-LqV~~~g-------------~W~~ 248 (347)
-+++++|.+-. ...+|.|+ ..+|+|+. | ..|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 58888997622 13456664 24787754 2 2234 4443211 2478
Q ss_pred ccCCCCeEEEEeChhhHHhhCCcc-cCccccccCCCCCCeeEEeEeecCC
Q 019027 249 VSPIPNTFIVNIGDQMQVLSNDRY-KSVLHRALVNCDKERISIPTFYCPS 297 (347)
Q Consensus 249 v~p~pg~~vVnvGd~l~~~TnG~~-~st~HRV~~~~~~~R~Si~~F~~P~ 297 (347)
|.|..|.+|+.-- ...+|.. ..++|+|.......||++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999999887653 1123432 5789999654456899999888644
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=82.77 E-value=3.9 Score=34.85 Aligned_cols=81 Identities=10% Similarity=0.057 Sum_probs=51.3
Q ss_pred cceEEeecCCCCCCCCCcccCCccCCC--------ceEEEecCCCCCceeee----------CCeEEEccCCCCeEEEEe
Q 019027 199 QHMALNYYPPCPQPDLTYGLPGHTDPN--------LITVLLQDDVPGLQVLR----------NGKWLPVSPIPNTFIVNI 260 (347)
Q Consensus 199 ~~lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~----------~g~W~~v~p~pg~~vVnv 260 (347)
..+-+|+|.+.. -++++|.|-- +.++-+- ...=+.+.. .+..+.+...+|+++|.-
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 456799998732 3678888862 1233231 111133331 125788999999999999
Q ss_pred ChhhHHhhCCcccCccccccCC--CCCCeeEEeEe
Q 019027 261 GDQMQVLSNDRYKSVLHRALVN--CDKERISIPTF 293 (347)
Q Consensus 261 Gd~l~~~TnG~~~st~HRV~~~--~~~~R~Si~~F 293 (347)
|++=..|. |.|-.. ....|+|+.|-
T Consensus 174 g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 174 HPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp TTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred chhhheeE--------eeccccCCCCCCEEEEEee
Confidence 99877776 555432 23679999884
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=81.03 E-value=4 Score=35.68 Aligned_cols=85 Identities=9% Similarity=0.108 Sum_probs=53.8
Q ss_pred cceEEeecCCCCCCCCCcccCCccCCC--------ceEEEecCCCCCceeee-C----------CeEEEccCCCCeEEEE
Q 019027 199 QHMALNYYPPCPQPDLTYGLPGHTDPN--------LITVLLQDDVPGLQVLR-N----------GKWLPVSPIPNTFIVN 259 (347)
Q Consensus 199 ~~lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~-~----------g~W~~v~p~pg~~vVn 259 (347)
..+-+|+|.+- .-++++|.|-- +.|+-+-. ..=+.+.. . +..+.+.-.+|+++|.
T Consensus 126 n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 126 NSLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp CEEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred CEEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 45679999863 23678888842 23333311 11123321 1 4688999999999999
Q ss_pred eChhhHHhhCCcccCccccccCCCCCCeeEEeEeec
Q 019027 260 IGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYC 295 (347)
Q Consensus 260 vGd~l~~~TnG~~~st~HRV~~~~~~~R~Si~~F~~ 295 (347)
-|++=..|.-|.-+.. .....|+|+.|-..
T Consensus 200 ~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 200 EGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp EETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred ChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 9998777764443321 12568999998763
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=70.02 E-value=4.7 Score=37.41 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=66.6
Q ss_pred ccceEEeecCCCCCCCCCcccCCccCCC------ceEEEecCCCCCceee-eCCeEEEccCCCCeEEEEeChhhHHhhCC
Q 019027 198 GQHMALNYYPPCPQPDLTYGLPGHTDPN------LITVLLQDDVPGLQVL-RNGKWLPVSPIPNTFIVNIGDQMQVLSND 270 (347)
Q Consensus 198 ~~~lr~~~Yp~~~~~~~~~g~~~HtD~g------~lTlL~qd~~~GLqV~-~~g~W~~v~p~pg~~vVnvGd~l~~~TnG 270 (347)
...+-+|+|.+. -++++|.|-. ..|+-+ ....=+.+. ++|.++.+...+|+++|.-|++=..|.-|
T Consensus 197 ~n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~ 269 (345)
T 3tht_A 197 PDQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHG 269 (345)
T ss_dssp CSEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEE
T ss_pred CCEEEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEcc
Confidence 456779999762 2688999874 233333 111223334 45779999999999999999999899766
Q ss_pred cccCccccccC------------------CCCCCeeEEeEeecCCCCceEecCCCccCC
Q 019027 271 RYKSVLHRALV------------------NCDKERISIPTFYCPSPDAVIAPAKDLIDE 311 (347)
Q Consensus 271 ~~~st~HRV~~------------------~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~ 311 (347)
.-+-...-+-. .....|+|+.|=..+...+.-. .+.+++.
T Consensus 270 I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C~-~~~~cd~ 327 (345)
T 3tht_A 270 ITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNCS-YPLVCDS 327 (345)
T ss_dssp ECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCCS-CTTTCTT
T ss_pred CCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCCC-CCCcccC
Confidence 65543332210 0134699999998776543322 2444443
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=67.38 E-value=8.5 Score=32.97 Aligned_cols=80 Identities=19% Similarity=0.112 Sum_probs=50.1
Q ss_pred cceEEeecCCCCCCCCCcccCCccCC-----C--ceEEEecCCCCCceee---eCCeEEEccCCCCeEEEEeChhhHHhh
Q 019027 199 QHMALNYYPPCPQPDLTYGLPGHTDP-----N--LITVLLQDDVPGLQVL---RNGKWLPVSPIPNTFIVNIGDQMQVLS 268 (347)
Q Consensus 199 ~~lr~~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~GLqV~---~~g~W~~v~p~pg~~vVnvGd~l~~~T 268 (347)
..+-+|+|.+. . ++++|.|- + +.++-+-. ..=+.+. +.+..+.+...+|+++|.-|++- .|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~- 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF- 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC-
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchHH-ce-
Confidence 45779999762 2 68899993 2 22333311 1223333 23578889999999999988762 22
Q ss_pred CCcccCccccccCCC-------CCCeeEEeEee
Q 019027 269 NDRYKSVLHRALVNC-------DKERISIPTFY 294 (347)
Q Consensus 269 nG~~~st~HRV~~~~-------~~~R~Si~~F~ 294 (347)
.|.|.... +..|+|+.|-.
T Consensus 176 -------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 47775422 23699999865
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=64.47 E-value=2.4 Score=40.73 Aligned_cols=53 Identities=8% Similarity=0.157 Sum_probs=42.0
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhC
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFK 98 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~ 98 (347)
.-||.||++++.++ .+.++..+.+++.|++.|.|. ||.+...+..+...+|.+
T Consensus 99 ~~iP~i~f~di~~~---~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 99 AVWPVLSYADIKAG---HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CSSCEEEHHHHHHT---CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCC---CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 57999999987432 234566788899999999887 899888888888888864
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=58.94 E-value=4.6 Score=37.99 Aligned_cols=52 Identities=6% Similarity=0.012 Sum_probs=40.8
Q ss_pred CCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhCC
Q 019027 43 SIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKS 99 (347)
Q Consensus 43 ~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~l 99 (347)
++|.||++++.. .++...++.+|+.++|++.+.|-.++.+.. .+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~--~d~~~~~~~~~l~~~Gvv~frg~~~~~~~~---~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLR--YDEHAYKWLSTLKKVGIVRLTGASDKPGEV---SKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHH--CHHHHHHHHHHHHHHSEEEEECCCSSTTHH---HHHHHHHSCC
T ss_pred CCCccCHHHHhc--CHHHHHHHHHHHHhcCEEEEeCCCCCHHHH---HHHHHHhCCC
Confidence 589999988753 367889999999999999999998886543 4557777544
No 18
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=57.98 E-value=18 Score=33.19 Aligned_cols=45 Identities=9% Similarity=0.026 Sum_probs=36.9
Q ss_pred CCChHHHHHHHHHHhhcccEEEEEccCCC----HHHHHHHHHHHHHhhC
Q 019027 54 GPSRLDTIKQIGQACQHDGFFQVRNHGIP----ETIINNMLTIARAFFK 98 (347)
Q Consensus 54 ~~~~~~~~~~l~~A~~~~Gff~l~nhGi~----~~l~~~~~~~~~~fF~ 98 (347)
.+..+++.+++.+.++.-||+.=.+|||+ .+-++.+.+++++|++
T Consensus 300 ~g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 300 PGPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 33567788888889988898777789875 4889999999999985
No 19
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=52.10 E-value=8 Score=32.97 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=30.2
Q ss_pred CCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCC
Q 019027 43 SIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGI 81 (347)
Q Consensus 43 ~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 81 (347)
.||++++... ...++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~---g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP---GSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT---TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998754 34678899999999888999999996
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=45.85 E-value=11 Score=32.12 Aligned_cols=36 Identities=17% Similarity=0.293 Sum_probs=29.9
Q ss_pred CCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCC
Q 019027 43 SIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGI 81 (347)
Q Consensus 43 ~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 81 (347)
.||++++... ...++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~---g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF---GTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT---TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6899988764 24678889999998888899999996
No 21
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=43.69 E-value=19 Score=31.84 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=38.6
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhC
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFK 98 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~ 98 (347)
++|+-||++...+ .+..++|.+++.++|++.+.+-.++.+.. .+.++.|-.
T Consensus 16 aei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G~ 66 (283)
T 1otj_A 16 AQISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFGE 66 (283)
T ss_dssp EEEESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTSC
T ss_pred EEEECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhCC
Confidence 5678889988542 56789999999999999999988876543 345666643
No 22
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=42.68 E-value=13 Score=31.31 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=29.9
Q ss_pred CCCceE-eCCCCCCCChHHHHHHHHHHhhcccEEEEEccCC
Q 019027 42 GSIPLV-DLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGI 81 (347)
Q Consensus 42 ~~iPvI-Dl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 81 (347)
..||++ ++... ...++++.+.+++.+.-.+.|.|||+
T Consensus 116 ~~ip~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 116 KEVPVLAPKTVS---ATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp SCEEEECCSCCS---SSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CCceEecCCCCC---CcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 368999 77654 34688899999999888999999985
No 23
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=42.48 E-value=16 Score=31.55 Aligned_cols=37 Identities=11% Similarity=0.163 Sum_probs=30.5
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCC
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGI 81 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 81 (347)
..||++++... ...++++.+.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKP---GSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCST---TCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 46899998654 24688899999999888999999996
No 24
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=40.48 E-value=64 Score=32.14 Aligned_cols=105 Identities=21% Similarity=0.196 Sum_probs=60.8
Q ss_pred HHHHHHHHHHcCCCHHHHHHHhcCcccceEEeecCCCCCCCCCcccCCccCC-C--ceEEEec----C------CCCCce
Q 019027 173 LRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDP-N--LITVLLQ----D------DVPGLQ 239 (347)
Q Consensus 173 ~~ll~~l~~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~-g--~lTlL~q----d------~~~GLq 239 (347)
..++..|+...|++. +.+...-+.++.|++. .....|.|. + .+|+++. | ..|-|+
T Consensus 104 ~~Fr~~Ls~iTGi~~------Lsg~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~ 171 (633)
T 3kt7_A 104 KQYRDFFGYVTKAGK------LSGSKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLR 171 (633)
T ss_dssp HHHHHHHHHHHTCCC------CCSSCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEE
T ss_pred HHHHHHHHHHhCCcc------cCCCceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEE
Confidence 345566777777631 2111223667788652 346778884 2 3565552 2 234588
Q ss_pred eee-C-------CeEEEccCCCCeEEEEeChhhHHhhCCcccCccccccC-CCCCCeeEEeEee-cCCC
Q 019027 240 VLR-N-------GKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALV-NCDKERISIPTFY-CPSP 298 (347)
Q Consensus 240 V~~-~-------g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~-~~~~~R~Si~~F~-~P~~ 298 (347)
++. + .....|.|..|.+|+..-. -+ ..+|.|.. .+++.|+||+-.+ .|..
T Consensus 172 Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 172 LFPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp ECCEEETTEECSSCSEEECCCTTEEEEEECC------TT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 873 2 2467899999999887521 01 24686632 1277899997655 4444
No 25
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=38.84 E-value=14 Score=31.26 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=28.1
Q ss_pred CCceEeCCCCCCCChHHHHHHHHHHhhccc---EEEEEccCC
Q 019027 43 SIPLVDLQVLNGPSRLDTIKQIGQACQHDG---FFQVRNHGI 81 (347)
Q Consensus 43 ~iPvIDl~~l~~~~~~~~~~~l~~A~~~~G---ff~l~nhGi 81 (347)
.||+++... +..++++.+.+++.+.+ .+.|.|||+
T Consensus 139 ~vp~~~~~~----g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNEQ----NIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCCS----CHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCCC----CHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 689988742 46788999999998875 788999996
No 26
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=35.79 E-value=28 Score=30.98 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=39.2
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccC-CCHHHHHHHHHHHHHhhCC
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHG-IPETIINNMLTIARAFFKS 99 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhG-i~~~l~~~~~~~~~~fF~l 99 (347)
++|+-||++...+ .+..++|.+++.++|++.+.+-. ++. +...+.++.|-.+
T Consensus 26 aei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 5677789987542 56789999999999999999987 885 3455566666543
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=35.00 E-value=22 Score=31.56 Aligned_cols=38 Identities=16% Similarity=0.283 Sum_probs=30.9
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCC
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGI 81 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 81 (347)
..||++|+..+.. ..++.+.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~--~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIAL--DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSC--CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCC--CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 4689998876532 4678889999999999999999995
No 28
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=34.92 E-value=17 Score=32.20 Aligned_cols=36 Identities=14% Similarity=0.120 Sum_probs=30.0
Q ss_pred CCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCC
Q 019027 43 SIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGI 81 (347)
Q Consensus 43 ~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 81 (347)
.||++++... ...++++.+.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP---GTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS---SSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC---CCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 6899887653 34688999999999999999999996
No 29
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=34.72 E-value=41 Score=19.22 Aligned_cols=19 Identities=21% Similarity=0.490 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhhcccEEEE
Q 019027 58 LDTIKQIGQACQHDGFFQV 76 (347)
Q Consensus 58 ~~~~~~l~~A~~~~Gff~l 76 (347)
.++.+.|.-.|.+-|||+.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 6788899999999999984
No 30
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.50 E-value=22 Score=24.81 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=35.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcC
Q 019027 155 PSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGK 196 (347)
Q Consensus 155 ~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~f~~~~~~ 196 (347)
.+-+..++.||..-.+-...-+..||..+||+.+...-.|.+
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFqN 55 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFEQ 55 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHhh
Confidence 356788999999988888889999999999999988777643
No 31
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=28.27 E-value=39 Score=29.85 Aligned_cols=51 Identities=20% Similarity=0.122 Sum_probs=39.3
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHhhC
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFK 98 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~ 98 (347)
++|.=|||+... ..+..++|.+|+.++|.+.+.|-.++.+. ..+.++.|=.
T Consensus 14 aei~gvdl~~~l---~~~~~~~l~~~l~~~gvv~fR~q~l~~~~---~~~fa~~fG~ 64 (277)
T 3pvj_A 14 AQISGVDISRDI---SAEERDAIEQALLQHQVLFLRDQPINPEQ---QARFAARFGD 64 (277)
T ss_dssp EEEESCCTTSCC---CHHHHHHHHHHHHHHSEEEESSCCCCHHH---HHHHHGGGSC
T ss_pred EEEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhCC
Confidence 567788998743 26778999999999999999999888653 3455666644
No 32
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=27.44 E-value=39 Score=18.64 Aligned_cols=13 Identities=31% Similarity=0.601 Sum_probs=10.2
Q ss_pred ceeeeCCeEEEcc
Q 019027 238 LQVLRNGKWLPVS 250 (347)
Q Consensus 238 LqV~~~g~W~~v~ 250 (347)
..|+++|.|+..+
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4567999999865
No 33
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=24.68 E-value=40 Score=25.86 Aligned_cols=36 Identities=11% Similarity=0.269 Sum_probs=27.4
Q ss_pred eEeCCCCCCCChHHHHHHHHHHhhcccEEEEEccCCCHH
Q 019027 46 LVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPET 84 (347)
Q Consensus 46 vIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~ 84 (347)
|||++.+... .....|.+.|+++|+..|--.|.+.+
T Consensus 51 VlDl~~l~~~---~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESP---VNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSS---CCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCCh---HHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 6899987522 23678999999999999877776654
No 34
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=24.28 E-value=55 Score=29.34 Aligned_cols=52 Identities=19% Similarity=0.129 Sum_probs=39.6
Q ss_pred CCCceEeCCCCCCCChHHHHHHHHHHhhcccEEEEEcc-CCCHHHHHHHHHHHHHhhCC
Q 019027 42 GSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNH-GIPETIINNMLTIARAFFKS 99 (347)
Q Consensus 42 ~~iPvIDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~l~~~~~~~~~~fF~l 99 (347)
++|+=|||+... ..+..++|.+|+.++|.+.+.|- .++.+ +..+.++.|=.+
T Consensus 20 aei~gvdl~~~L---~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDL---DDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTC---CHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 567778998433 36778999999999999999998 78875 344567776544
No 35
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=23.66 E-value=66 Score=28.82 Aligned_cols=63 Identities=14% Similarity=0.201 Sum_probs=38.7
Q ss_pred ccCCccCC--------CceEEEec-CCCCCceeeeCCeEEEccCCCCe-EEEEeChhhHHhhCCcccCccccccCCCCCC
Q 019027 217 GLPGHTDP--------NLITVLLQ-DDVPGLQVLRNGKWLPVSPIPNT-FIVNIGDQMQVLSNDRYKSVLHRALVNCDKE 286 (347)
Q Consensus 217 g~~~HtD~--------g~lTlL~q-d~~~GLqV~~~g~W~~v~p~pg~-~vVnvGd~l~~~TnG~~~st~HRV~~~~~~~ 286 (347)
.+.+|.|. +.+-+... ...+|..+..+|+-+..++ |. .++| -+..|.|.+.+..+
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d-------------~~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLD-------------AATVHSAVNFSEIS 167 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECC-------------TTSCEEEEESSSSC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEc-------------CCCeeEEEcCCCCC
Confidence 47889998 22333322 2346666666665555544 43 2222 24579999988889
Q ss_pred eeEEeEee
Q 019027 287 RISIPTFY 294 (347)
Q Consensus 287 R~Si~~F~ 294 (347)
|+.+.+=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99988655
No 36
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=22.15 E-value=77 Score=20.15 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCHHH
Q 019027 166 TSVRGLVLRLLEAISESLGLQRDF 189 (347)
Q Consensus 166 ~~~~~la~~ll~~l~~~Lgl~~~~ 189 (347)
+.-.+++..|.+++++.||.+++.
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345688999999999999999754
Done!