Your job contains 1 sequence.
>019028
MASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVT
CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYL
DHVDGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLDLDYGHVDTKLE
AQEQNSSGTDGVVPVQTRNVNANGHLVNDACFDLDFPGSKSYGYGYNSHSQCLSQSVSSS
SLEVGVVPDGSSAMTDITNPYGKGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEK
TIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADRSSSIYGFGIVPSF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019028
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 488 2.5e-75 2
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 720 3.7e-71 1
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 663 4.1e-65 1
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 652 6.0e-64 1
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 644 4.2e-63 1
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 345 1.3e-55 2
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 300 6.8e-51 2
UNIPROTKB|Q9FRZ7 - symbol:Hd1 "Hd1 protein" species:39946... 355 1.8e-32 1
UNIPROTKB|Q9FRZ6 - symbol:Q9FRZ6 "Hd1" species:4530 "Oryz... 345 2.0e-31 1
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 209 5.4e-27 2
TAIR|locus:2051104 - symbol:BBX12 "B-box domain protein 1... 210 2.4e-26 2
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 205 6.0e-25 2
TAIR|locus:2010504 - symbol:BBX13 "B-box domain protein 1... 206 2.9e-24 2
TAIR|locus:2091082 - symbol:COL9 "CONSTANS-like 9" specie... 193 9.2e-24 2
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 181 2.0e-21 2
TAIR|locus:2088748 - symbol:BBX10 "B-box domain protein 1... 178 2.3e-21 2
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 166 1.9e-20 3
TAIR|locus:2050130 - symbol:BBX18 "B-box domain protein 1... 227 6.5e-19 1
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 150 1.1e-17 2
TAIR|locus:2198841 - symbol:STO "SALT TOLERANCE" species:... 215 1.5e-17 1
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 152 1.9e-17 2
TAIR|locus:2061330 - symbol:STH "salt tolerance homologue... 208 1.0e-16 1
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 156 2.2e-16 2
TAIR|locus:2005624 - symbol:BBX21 "B-box domain protein 2... 204 1.6e-14 1
TAIR|locus:2120207 - symbol:BZS1 "BZS1" species:3702 "Ara... 180 1.6e-13 1
TAIR|locus:2122759 - symbol:bbx23 "B-box domain protein 2... 167 4.7e-12 1
TAIR|locus:2199262 - symbol:BBX27 "B-box domain protein 2... 178 1.2e-11 2
TAIR|locus:2207155 - symbol:AT1G05290 species:3702 "Arabi... 136 4.1e-10 2
TAIR|locus:2145698 - symbol:AT5G14370 species:3702 "Arabi... 158 5.8e-09 1
TAIR|locus:1009023318 - symbol:BBX30 "B-box domain protei... 133 2.7e-08 1
TAIR|locus:2007482 - symbol:AT1G07050 "AT1G07050" species... 139 3.5e-08 1
TAIR|locus:2095562 - symbol:BBX31 "B-box domain protein 3... 131 4.5e-08 1
TAIR|locus:2062749 - symbol:AT2G46670 "AT2G46670" species... 132 1.4e-07 1
TAIR|locus:2175564 - symbol:CIA2 "chloroplast import appa... 148 1.4e-07 1
TAIR|locus:2177911 - symbol:AT5G41380 "AT5G41380" species... 145 1.4e-07 1
TAIR|locus:2090374 - symbol:ASML2 "activator of spomin::L... 137 6.4e-07 1
TAIR|locus:2131709 - symbol:BBX28 "B-box domain protein 2... 135 6.5e-07 1
TAIR|locus:2195518 - symbol:AT1G63820 species:3702 "Arabi... 138 6.7e-07 2
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 143 1.1e-06 1
TAIR|locus:2132902 - symbol:AT4G27900 "AT4G27900" species... 135 1.3e-06 1
TAIR|locus:2147274 - symbol:BBX29 "B-box domain protein 2... 131 1.7e-06 1
TAIR|locus:2018344 - symbol:AT1G04500 "AT1G04500" species... 136 2.5e-06 1
TAIR|locus:2178441 - symbol:AT5G53420 "AT5G53420" species... 130 5.0e-06 1
TAIR|locus:2168083 - symbol:AT5G59990 "AT5G59990" species... 127 8.3e-06 1
TAIR|locus:2051099 - symbol:AT2G33350 "AT2G33350" species... 131 1.0e-05 1
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 132 1.1e-05 2
TAIR|locus:2092940 - symbol:BBX32 "B-box domain protein 3... 125 1.1e-05 1
TAIR|locus:2195643 - symbol:BBX26 "B-box domain protein 2... 124 2.1e-05 1
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 129 8.4e-05 2
TAIR|locus:2120850 - symbol:CIL "AT4G25990" species:3702 ... 120 0.00018 1
TAIR|locus:505006360 - symbol:ZML1 "ZIM-like 1" species:3... 113 0.00060 1
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 488 (176.8 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 89/116 (76%), Positives = 101/116 (87%)
Query: 2 ASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTC 61
+S+LCDSCKS AT+FCRAD+AFLC +CD KIH ANKLASRH RVW+CEVCEQAPAHVTC
Sbjct: 4 SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTC 63
Query: 62 KADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDED 117
KADAAALCVTCDRDIHSANPL+RRHERVP+TPFYD+V + K + V NF+DED
Sbjct: 64 KADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA--KSASSSV-NFVDED 116
Score = 290 (107.1 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 71/146 (48%), Positives = 84/146 (57%)
Query: 203 NGHLVNDACFDLDFPGSKSYGYGYNXXXXXXXXXXXXXXXEVGVVPDGSSAMTDITNPYG 262
N +N+ F+ D SK G+N +V +VP+ ++TN
Sbjct: 164 NKLFLNEDYFNFDLSASKISQQGFNFINQTVSTRTI----DVPLVPESGGVTAEMTNT-- 217
Query: 263 KGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFA 322
VQ+S A+REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFA
Sbjct: 218 --------ETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFA 269
Query: 323 KRTDLEVEPADRSSSIYG-FGIVPSF 347
KRTD E +YG FG+VPSF
Sbjct: 270 KRTDSR-ENDGGDVGVYGGFGVVPSF 294
Score = 101 (40.6 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 29/93 (31%), Positives = 42/93 (45%)
Query: 167 YLDLDYGHVDTKLEAQEQNSSGTDGVVPVQTRNVNANGHLVNDACFDLDFPGSKSYGYGY 226
+ DLDY ++ E+NSSG DGVVPVQ N +N+ F+ D SK G+
Sbjct: 137 FSDLDYPKIEV---TSEENSSGNDGVVPVQ------NKLFLNEDYFNFDLSASKISQQGF 187
Query: 227 NXXXXXXXXXXXXXXXEVGVVPDGSSAMTDITN 259
N +V +VP+ ++TN
Sbjct: 188 NFINQTVSTRTI----DVPLVPESGGVTAEMTN 216
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 166/357 (46%), Positives = 208/357 (58%)
Query: 2 ASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTC 61
A++ CD+CKS TA VFCR DSAFLC+ CDT+IH+ +RH RVWVCEVCEQAPA VTC
Sbjct: 18 AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTC 73
Query: 62 KADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLD 121
KADAAALCV+CD DIHSANPLA RHERVPV F+DS +++ K L
Sbjct: 74 KADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGSSTT-- 131
Query: 122 HVDGRSGDVSREEAEAASWLLPI----PKVADLNTG--QAQEPYVFPDMDPYLDLDYGHV 175
VD + V ++ WLLP P ++ T + ++F D D +D ++ +
Sbjct: 132 -VDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEFPNS 190
Query: 176 DTKLEAQEQNSSGTDGVVPVQTRNVNANGHLVNDACFDLDFPGSKSYGYGYNXXXXXXXX 235
QN++G D +VPVQT+ ND CFD+DF SK + Y
Sbjct: 191 FN----HHQNNAGGDSLVPVQTKT-EPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSV 245
Query: 236 XXXXXXXEVGVVPDGSSAMTDITNPYGKGVGVEAGNQTVVQISAADREARVLRYREKRKN 295
E GVVPDG++ N + + Q S+ DREARVLRYREKRKN
Sbjct: 246 STSSI--EYGVVPDGNT-----NNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKN 298
Query: 296 RKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADRS----SSIYG-FGIVPSF 347
RKFEKTIRYASRKAYAE RPRIKGRFAKRT+ E + S S+ + +G+VP+F
Sbjct: 299 RKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPTF 355
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 162/362 (44%), Positives = 209/362 (57%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCK 62
++ CD+C+SA TV+CRADSA+LC +CD ++HAAN+LASRH RV VC+ CE+APA CK
Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68
Query: 63 ADAAALCVTCDRDIHSANPLARRHERVPVTPFYD-SVDSSAVKQGNGGVVNFLDEDRYLD 121
ADAA+LC TCD +IHSANPLARRH+RVP+ P + S S+A V D + L
Sbjct: 69 ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVT--DPENRL- 125
Query: 122 HVDGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLDL-DYGHVDTKLE 180
V G+ + +EAEAASWLLP + N+G F D +L+L DY D +
Sbjct: 126 -VLGQEEE-DEDEAEAASWLLPN---SGKNSGNNNG---FSIGDEFLNLVDYSSSDKQFT 177
Query: 181 AQE----------QNSSGTDGVVPVQTRNVNANGHLVNDACFDLDFPGSKSYGYGYNXXX 230
Q Q S G DGVVP+Q + G F L S+G
Sbjct: 178 DQSNQYQLDCNVPQRSYGEDGVVPLQIEV--SKGMYQEQQNFQLSI-NCGSWG-ALRSSN 233
Query: 231 XXXXXXXXXXXXEVGVVPDGSSAMTDITNPYG-KGVGVEAGNQTVVQISAADREARVLRY 289
++GVVP+ +++ ++NP K V + +S DREARVLRY
Sbjct: 234 GSLSHMVNVSSMDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRY 293
Query: 290 REKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADRSSSIY----GFGIVP 345
REK+K RKFEKTIRYASRKAYAE RPRIKGRFAK+ D++ E S++ G+GIVP
Sbjct: 294 REKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVP 353
Query: 346 SF 347
SF
Sbjct: 354 SF 355
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 161/367 (43%), Positives = 212/367 (57%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
CD+C+S TV+C ADSA+LC++CD ++H+AN++ASRH RV VCE CE+APA C+AD
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADD 79
Query: 66 AALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYL--DHV 123
A+LC CD ++HSANPLARRH+RVP+ P + SS + D ++ L D
Sbjct: 80 ASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQE 139
Query: 124 DGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLDL-DYGH-VDTKLEA 181
+G GD ++ E ASWL P +D N +F D YL+L DY +D K
Sbjct: 140 EGEEGD--KDAKEVASWLFPN---SDKNNNNQNNGLLFSD--EYLNLVDYNSSMDYKFTG 192
Query: 182 Q----EQNSS------GTDGVVPVQTRNVNANGHLV-NDACFDLDFPGSKSYGYGYNXXX 230
+ +QN S G D VVP++ + GH N F + S G YN
Sbjct: 193 EYSQHQQNCSVPQTSYGGDRVVPLKLEE--SRGHQCHNQQNFQFNIKYGSS-GTHYNDNG 249
Query: 231 XXXXXXXXXXXXEVGVVPDGSSAMTDITNPYG-KGVGVEA----GNQ--TVVQISAADRE 283
E GVVP+ ++ +T ++P KG VE +Q TV Q+S DRE
Sbjct: 250 SINHNAYISSM-ETGVVPESTACVTTASHPRTPKGT-VEQQPDPASQMITVTQLSPMDRE 307
Query: 284 ARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADRSSSI-Y--G 340
ARVLRYREKRK RKFEKTIRYASRKAYAE+RPR+ GRFAKR ++E E ++ + Y G
Sbjct: 308 ARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR-EIEAEEQGFNTMLMYNTG 366
Query: 341 FGIVPSF 347
+GIVPSF
Sbjct: 367 YGIVPSF 373
Score = 131 (51.2 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARV 46
++C+SC+ A A C AD A LC CD+++H+AN LA RH RV
Sbjct: 61 RVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRV 103
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 159/362 (43%), Positives = 210/362 (58%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCK 62
++ CD+C+SA TV+C ADSA+LC CD ++HAAN++ASRH RV VC+ CE APA CK
Sbjct: 13 ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK 72
Query: 63 ADAAALCVTCDRDIHSANPLARRHERVPVTPFY-DSVDSSAVKQGNGGVVNFLDEDRYLD 121
ADAA+LC CD +IHSANPLARRH+RVP+ P +S S A + + N DED
Sbjct: 73 ADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSETDAD--N--DED---- 124
Query: 122 HVDGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLDL-DYGH-VDTKL 179
+ E ASWLLP P N G ++F ++ YLDL DY +D +
Sbjct: 125 ------------DREVASWLLPNP---GKNIGNQNNGFLF-GVE-YLDLVDYSSSMDNQF 167
Query: 180 EAQE----QNSSGTDGVVPVQTRNVNANGHLV-NDACFDLDFPGSKSYGYGYNXXXXXXX 234
E + Q S G DGVVP+Q + HL + F L S G YN
Sbjct: 168 EDNQYTHYQRSFGGDGVVPLQVEE--STSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDL 225
Query: 235 XXXXXXXX-EVGVVPDGSSAMTDITNPYGKGVGVE--AG--NQTVVQISAADREARVLRY 289
++ VVP+ +++ + +P ++ +G Q V Q++ +REARVLRY
Sbjct: 226 NHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRY 285
Query: 290 REKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADR-SSSIY---GFGIVP 345
REK+K RKF+KTIRYASRKAYAE+RPRIKGRFAKR + E E + S+S+ G+GIVP
Sbjct: 286 REKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVP 345
Query: 346 SF 347
SF
Sbjct: 346 SF 347
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 345 (126.5 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 57/88 (64%), Positives = 74/88 (84%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
CD C++A + V+CRAD+A+LC +CD ++HAAN++ASRH RV VCE CE+APA + C+ADA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRADA 94
Query: 66 AALCVTCDRDIHSANPLARRHERVPVTP 93
AALCV CD ++SANPLARRH+RVPV P
Sbjct: 95 AALCVACDVQVYSANPLARRHQRVPVAP 122
Score = 246 (91.7 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 74/198 (37%), Positives = 99/198 (50%)
Query: 169 DLDYG-HVDTKLEAQEQN-------SSGTDGVVPVQTRNVNANGHLVNDACFDLDFPGSK 220
D YG H + + Q+Q G++ VVP Q ++ H D S
Sbjct: 216 DRQYGMHEQQEQQQQQQEMQKEFAEKEGSECVVPSQITMLSEQQHS-GYGVVGADQAASM 274
Query: 221 SYGYGYNXXXXXXXXXXXXXXXEVGVVPDGSSAMTDITN-----PYGKGVGVEAGN--QT 273
+ G + E G+VPD S + D+ N P G + + +G Q
Sbjct: 275 TAGV--SAYTDSISNSISFSSMEAGIVPD--STVIDMPNSRILTPAG-AINLFSGPSLQM 329
Query: 274 VVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPAD 333
+ S+ DREARVLRYREK+K RKFEKTIRY +RKAYAE RPRIKGRFAKR+D+++E
Sbjct: 330 SLHFSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQIEVDQ 389
Query: 334 RSSSIY----GFGIVPSF 347
S+ +G VP F
Sbjct: 390 MFSTAALSDGSYGTVPWF 407
Score = 139 (54.0 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEV-CEQAPA-HVTC 61
++C++C+ A A + CRAD+A LCV CD ++++AN LA RH RV V + PA V
Sbjct: 76 RVCEACERAPAALACRADAAALCVACDVQVYSANPLARRHQRVPVAPLPAITIPATSVLA 135
Query: 62 KADAAALCVTCDRD 75
+A A V D+D
Sbjct: 136 EAVVATATVLGDKD 149
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 300 (110.7 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
CD C++A + V+CRAD+A+LC +CD ++HAAN++ASRH RV VCE CE+APA + C+ADA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRADA 94
Query: 66 AALCVTCDRDIHSANPL 82
AALCV CD +HSANPL
Sbjct: 95 AALCVACDVQVHSANPL 111
Score = 246 (91.7 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 74/198 (37%), Positives = 99/198 (50%)
Query: 169 DLDYG-HVDTKLEAQEQN-------SSGTDGVVPVQTRNVNANGHLVNDACFDLDFPGSK 220
D YG H + + Q+Q G++ VVP Q ++ H D S
Sbjct: 204 DRQYGMHEQQEQQQQQQEMQKEFAEKEGSECVVPSQITMLSEQQHS-GYGVVGADQAASM 262
Query: 221 SYGYGYNXXXXXXXXXXXXXXXEVGVVPDGSSAMTDITN-----PYGKGVGVEAGN--QT 273
+ G + E G+VPD S + D+ N P G + + +G Q
Sbjct: 263 TAGV--SAYTDSISNSISFSSMEAGIVPD--STVIDMPNSRILTPAG-AINLFSGPSLQM 317
Query: 274 VVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPAD 333
+ S+ DREARVLRYREK+K RKFEKTIRY +RKAYAE RPRIKGRFAKR+D+++E
Sbjct: 318 SLHFSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQIEVDQ 377
Query: 334 RSSSIY----GFGIVPSF 347
S+ +G VP F
Sbjct: 378 MFSTAALSDGSYGTVPWF 395
Score = 133 (51.9 bits), Expect = 7.8e-33, Sum P(2) = 7.8e-33
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 49 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPV 91
C+ C AP+ V C+ADAA LC +CD +H+AN +A RHERV V
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV 77
Score = 113 (44.8 bits), Expect = 9.8e-31, Sum P(2) = 9.8e-31
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKL 39
++C++C+ A A + CRAD+A LCV CD ++H+AN L
Sbjct: 76 RVCEACERAPAALACRADAAALCVACDVQVHSANPL 111
>UNIPROTKB|Q9FRZ7 [details] [associations]
symbol:Hd1 "Hd1 protein" species:39946 "Oryza sativa Indica
Group" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041839 EMBL:AB564434 Gramene:Q9FRZ7
Uniprot:Q9FRZ7
Length = 342
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
CD C++A + V+CRAD+A+LC +CD ++HAAN++ASRH RV VCE CEQAPA + C+ADA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACEQAPAALACRADA 94
Query: 66 AALCVTCDRDIHSANPLARRHERVPVTP 93
AALCV CD +HSANPLARRH+RVPV P
Sbjct: 95 AALCVACDVQVHSANPLARRHQRVPVAP 122
Score = 139 (54.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEV-CEQAPA-HVTC 61
++C++C+ A A + CRAD+A LCV CD ++H+AN LA RH RV V + PA V
Sbjct: 76 RVCEACEQAPAALACRADAAALCVACDVQVHSANPLARRHQRVPVAPLPAITIPATSVLA 135
Query: 62 KADAAALCVTCDRD 75
+A A V +D
Sbjct: 136 EAVVATATVLGGKD 149
>UNIPROTKB|Q9FRZ6 [details] [associations]
symbol:Q9FRZ6 "Hd1" species:4530 "Oryza sativa" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0010229 "inflorescence development" evidence=IGI]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] InterPro:IPR000315
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041841 Gramene:Q9FRZ6 Genevestigator:Q9FRZ6
Uniprot:Q9FRZ6
Length = 259
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 57/88 (64%), Positives = 74/88 (84%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
CD C++A + V+CRAD+A+LC +CD ++HAAN++ASRH RV VCE CE+APA + C+ADA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRADA 94
Query: 66 AALCVTCDRDIHSANPLARRHERVPVTP 93
AALCV CD ++SANPLARRH+RVPV P
Sbjct: 95 AALCVACDVQVYSANPLARRHQRVPVAP 122
Score = 139 (54.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEV-CEQAPA-HVTC 61
++C++C+ A A + CRAD+A LCV CD ++++AN LA RH RV V + PA V
Sbjct: 76 RVCEACERAPAALACRADAAALCVACDVQVYSANPLARRHQRVPVAPLPAITIPATSVLA 135
Query: 62 KADAAALCVTCDRD 75
+A A V D+D
Sbjct: 136 EAVVATATVLGDKD 149
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 209 (78.6 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 36/91 (39%), Positives = 58/91 (63%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKA 63
+LCD C S+ A V+C+ADSA LC+ CD ++H AN+L ++H R +C+ C ++P+ + C+
Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCET 70
Query: 64 DAAALCVTCDRDIHSANPLARRHERVPVTPF 94
+ + LC CD H+A+ + H R P F
Sbjct: 71 ERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99
Score = 144 (55.7 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 276 QISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 326
+I++ +R + + RY+EK+K+R++EK IRY SRK AE R RI+GRFAK D
Sbjct: 281 EINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAAD 331
Score = 120 (47.3 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 43 HARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHER 88
H R +C+ C+ + A V CKAD+A LC+ CD+ +H AN L +H R
Sbjct: 7 HQRDRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR 52
Score = 100 (40.3 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHAR 45
S LCDSC + +++FC + + LC NCD + H A+ +S H+R
Sbjct: 53 SLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSR 93
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 2 ASKLCDSCKSATAT---VFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCE 53
++KLC +C +F + + LC +C+ + + L R +C+ C+
Sbjct: 29 SAKLCLACDKQVHVANQLFAKHFRSLLCDSCN---ESPSSLFCETERSVLCQNCD 80
>TAIR|locus:2051104 [details] [associations]
symbol:BBX12 "B-box domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC002332 EMBL:BT002067 EMBL:AY128321
EMBL:BT006572 IPI:IPI00527026 IPI:IPI00539934 PIR:C84746
RefSeq:NP_850211.1 RefSeq:NP_973589.1 UniGene:At.43493
IntAct:O22800 STRING:O22800 EnsemblPlants:AT2G33500.1 GeneID:817915
KEGG:ath:AT2G33500 TAIR:At2g33500 eggNOG:NOG269245
HOGENOM:HOG000243233 InParanoid:O22800 OMA:ATHERSA PhylomeDB:O22800
ProtClustDB:CLSN2713949 Genevestigator:O22800 Uniprot:O22800
Length = 402
Score = 210 (79.0 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 37/89 (41%), Positives = 51/89 (57%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
C+ C TA +FCRAD+A LC+ CD +H+AN L+ +H R +C+ C + P V C D
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 66 AALCVTCDRDIHSANPLARRHERVPVTPF 94
LC CD D+H + + HER V F
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGF 100
Score = 144 (55.7 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 267 VEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 326
V N + Q+ A +R+ + RY+EK+K R+++KTIRY +RKA AE R R+KGRF K TD
Sbjct: 343 VAVTNADLEQM-AQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKATD 401
Score = 118 (46.6 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 46 VWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHER 88
V CE C + A + C+AD A LC+ CD+ +HSAN L+R+H R
Sbjct: 9 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR 51
Score = 86 (35.3 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHAR 45
S++CD+C +V C D+ LC CD +H + ++ H R
Sbjct: 52 SQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHER 94
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 205 (77.2 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 38/99 (38%), Positives = 52/99 (52%)
Query: 5 LCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKAD 64
+CD C + V+CR+D+A LC++CD +H+AN L+ RH+R VCE C PA V C +
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 63
Query: 65 AAALCVTCDRDIHSA-NPLARRHERVPVTPFYDSVDSSA 102
+LC CD H N H + Y SSA
Sbjct: 64 RVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSA 102
Score = 135 (52.6 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 272 QTVVQIS-AADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 323
Q ++ S A R V+RY+EK+K RKF+K +RY SRK A++R R+KGRF K
Sbjct: 305 QDIIASSHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVK 357
Score = 132 (51.5 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 47 WVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPV 91
++C+ C + + V C++DAA LC++CDR++HSAN L++RH R V
Sbjct: 3 YMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV 47
>TAIR|locus:2010504 [details] [associations]
symbol:BBX13 "B-box domain protein 13" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AC069471
HOGENOM:HOG000243233 ProtClustDB:CLSN2713949 EMBL:AY037206
EMBL:BT002681 IPI:IPI00538865 PIR:B86406 RefSeq:NP_174126.1
UniGene:At.19754 ProteinModelPortal:Q9C7E8 SMR:Q9C7E8 IntAct:Q9C7E8
STRING:Q9C7E8 PRIDE:Q9C7E8 EnsemblPlants:AT1G28050.1 GeneID:839698
KEGG:ath:AT1G28050 TAIR:At1g28050 eggNOG:NOG245106
InParanoid:Q9C7E8 OMA:SCGRYKQ PhylomeDB:Q9C7E8
Genevestigator:Q9C7E8 GermOnline:AT1G28050 Uniprot:Q9C7E8
Length = 433
Score = 206 (77.6 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 37/89 (41%), Positives = 50/89 (56%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
CD C TA +FCRAD+A LC+ CD ++H AN L+ +H R +C+ C P V C D
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68
Query: 66 AALCVTCDRDIHSANPLARRHERVPVTPF 94
LC CD D+H + ++ H R V F
Sbjct: 69 LILCQECDWDVHGSCSVSDAHVRSAVEGF 97
Score = 131 (51.2 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 279 AADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 326
A +R + RY+EKRK R+++KTIRY SRKA A+ R R++GRF K ++
Sbjct: 382 AQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASE 429
Score = 89 (36.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHAR 45
S++CD+C + +V C D+ LC CD +H + ++ H R
Sbjct: 49 SQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVR 91
>TAIR|locus:2091082 [details] [associations]
symbol:COL9 "CONSTANS-like 9" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0007623 GO:GO:0008270 GO:GO:0003700
EMBL:AC009176 eggNOG:NOG248444 HOGENOM:HOG000116529
ProtClustDB:CLSN2684850 EMBL:AY049290 IPI:IPI00522412
RefSeq:NP_001030659.1 RefSeq:NP_001118599.1 RefSeq:NP_187422.1
RefSeq:NP_974250.1 UniGene:At.18337 STRING:Q9SSE5 PRIDE:Q9SSE5
EnsemblPlants:AT3G07650.1 EnsemblPlants:AT3G07650.2
EnsemblPlants:AT3G07650.3 EnsemblPlants:AT3G07650.4 GeneID:819956
KEGG:ath:AT3G07650 TAIR:At3g07650 InParanoid:Q9SSE5 OMA:TSHIQTE
PhylomeDB:Q9SSE5 Genevestigator:Q9SSE5 GermOnline:AT3G07650
GO:GO:0048579 Uniprot:Q9SSE5
Length = 372
Score = 193 (73.0 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 5 LCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKAD 64
+CD C + V+CR+D+A LC++CD +H+AN L+ RH+R VCE C PA V C +
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEE 63
Query: 65 AAALCVTCDRDIHS 78
+LC CD H+
Sbjct: 64 RVSLCQNCDWSGHN 77
Score = 139 (54.0 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 282 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 323
R V+RY+EK+K RKF+K +RYASRKA A++R R+KGRF K
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
Score = 131 (51.2 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 47 WVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPV 91
++C+ C + + V C++DAA LC++CDR +HSAN L++RH R V
Sbjct: 3 YMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 181 (68.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
CD C + A ++C++DSA LC+NCD +H+AN L+ RH R +CE C P V C +
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNEN 64
Query: 66 AALCVTCDRDIHSANPLARRHERVPVTPFYD 96
+LC C + L R + + P+ D
Sbjct: 65 VSLCQGCQWTASNCTGLGHRLQSL--NPYSD 93
Score = 128 (50.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 50/168 (29%), Positives = 75/168 (44%)
Query: 183 EQNSSGTDGVVPVQTRNVNANGHLVND--ACFDLDFPGSKSYGY--GYNXXXXXXXXXXX 238
E+ SG D + + N + ND C LD +K Y Y +
Sbjct: 162 EEECSGLDLCEGINLDDAPLNFNASNDIIGCSSLD--NTKCYEYEDSFKEENNIGLPSLL 219
Query: 239 XXXXEVGVVPDGSSAMTDITNP-----Y---GKGVGVEAGN---QTVVQISAAD--REAR 285
VVP+ S +M+++T Y G G G+ ++ V++S R+
Sbjct: 220 LPTLSGNVVPNMSLSMSNLTGESNATDYQDCGISPGFLIGDSPWESNVEVSFNPKLRDEA 279
Query: 286 VLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD-LEVEPA 332
RY++K+ R F K IRYASRKA A+ R R+KGRF K + E +P+
Sbjct: 280 KKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVKSGETFEYDPS 327
Score = 52 (23.4 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNC 29
S LC+ C V C ++ LC C
Sbjct: 45 SLLCEKCSLQPTAVHCMNENVSLCQGC 71
>TAIR|locus:2088748 [details] [associations]
symbol:BBX10 "B-box domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AP000739 HOGENOM:HOG000116529 EMBL:AB493626 IPI:IPI00533145
RefSeq:NP_188826.1 UniGene:At.53422 EnsemblPlants:AT3G21880.1
GeneID:821743 KEGG:ath:AT3G21880 TAIR:At3g21880 eggNOG:NOG290178
InParanoid:Q9LJ44 OMA:KKTRTFG PhylomeDB:Q9LJ44
ProtClustDB:CLSN2685267 Genevestigator:Q9LJ44 Uniprot:Q9LJ44
Length = 364
Score = 178 (67.7 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 32/89 (35%), Positives = 48/89 (53%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65
CD C ++ A ++C++D A LC+NCD +H+AN L+ RH R +CE C PA + C +
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDEK 64
Query: 66 AALCVTCDRDIHSANPLARRHERVPVTPF 94
+ C C H +N H + PF
Sbjct: 65 VSYCQGCHW--HESNCSELGHRVQSLNPF 91
Score = 134 (52.2 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 268 EAGNQTVVQISA--ADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 325
EA +T ++S A EA+ LRY+EK+ R F K IRYASRKA A+ R R+KGRF K
Sbjct: 292 EAPWETNFEVSCPQARNEAK-LRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAG 350
Query: 326 D-LEVEPADRSSS 337
D + +P+ +++
Sbjct: 351 DSYDYDPSSPTTN 363
Score = 47 (21.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNC 29
S +C+ C S A + C + C C
Sbjct: 45 SLICEKCFSQPAAIRCLDEKVSYCQGC 71
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 166 (63.5 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 34/50 (68%), Positives = 37/50 (74%)
Query: 278 SAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDL 327
S +REARVLRY+EKR+ R F K IRY RK AE RPRIKGRF KRT L
Sbjct: 341 SDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSL 390
Score = 138 (53.6 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 1 MASKLCDSC-KSATATVFCRADSAFLCVNCDTKIHAANKLASRHARV 46
MA++ CD+C K + A+ +C AD AFLC +CD IH+AN LA RH RV
Sbjct: 17 MAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERV 63
Score = 115 (45.5 bits), Expect = 4.4e-18, Sum P(3) = 4.4e-18
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 49 CEVC-EQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
C+ C +++ A C AD A LC +CD IHSAN LA+RHERV
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERV 63
Score = 37 (18.1 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 108 GGVVNFLDEDRYLDHVDGRSGDVSREEAEA 137
GG + D + GR G S E EA
Sbjct: 318 GGYEKLMSSDGSVTRQQGRDGGGSDGEREA 347
>TAIR|locus:2050130 [details] [associations]
symbol:BBX18 "B-box domain protein 18" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270
EMBL:AC006841 GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000239240
EMBL:AY060570 EMBL:AY125573 IPI:IPI00525924 PIR:H84599
RefSeq:NP_565507.1 UniGene:At.27367 ProteinModelPortal:Q9SJU5
SMR:Q9SJU5 STRING:Q9SJU5 EnsemblPlants:AT2G21320.1 GeneID:816671
KEGG:ath:AT2G21320 TAIR:At2g21320 eggNOG:NOG329451
InParanoid:Q9SJU5 OMA:KCNKLAS PhylomeDB:Q9SJU5
ProtClustDB:CLSN2914972 ArrayExpress:Q9SJU5 Genevestigator:Q9SJU5
Uniprot:Q9SJU5
Length = 172
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 44/92 (47%), Positives = 56/92 (60%)
Query: 5 LCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV--------CEVCEQAP 56
LCD+C+SA A VFC AD A LC +CD K+H NKLASRH RV + C++CE AP
Sbjct: 4 LCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICENAP 63
Query: 57 AHVTCKADAAALCVTCDRDIHSANPLARRHER 88
A C+ D ++LC+ CD +H R H R
Sbjct: 64 AFFYCEIDGSSLCLQCDMVVHVGGK--RTHRR 93
Score = 126 (49.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 48 VCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
+C+ CE A A V C AD AALC +CD +H N LA RH RV
Sbjct: 4 LCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRV 45
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 150 (57.9 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 31/46 (67%), Positives = 33/46 (71%)
Query: 282 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDL 327
REARV RYREKR+ R F K IRY RK AE RPR+KGRF KR L
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASL 406
Score = 134 (52.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 36 ANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
AN + ++ AR C+ C + A C AD A LC +CD +HSANPLARRHERV
Sbjct: 6 ANAVGAKTARA--CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERV 57
Score = 132 (51.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARV 46
++ CDSC A +C AD AFLC +CD+ +H+AN LA RH RV
Sbjct: 14 ARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERV 57
>TAIR|locus:2198841 [details] [associations]
symbol:STO "SALT TOLERANCE" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009640 "photomorphogenesis" evidence=IGI]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009651
"response to salt stress" evidence=IGI;RCA] [GO:0009737 "response
to abscisic acid stimulus" evidence=RCA] [GO:0046686 "response to
cadmium ion" evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0080167 GO:GO:0009640 EMBL:AC024174 HOGENOM:HOG000239240
ProtClustDB:CLSN2682276 EMBL:X95572 EMBL:AY079377 EMBL:AY045794
IPI:IPI00518701 PIR:E86195 RefSeq:NP_172094.1 UniGene:At.23289
UniGene:At.38035 UniGene:At.70752 ProteinModelPortal:Q96288
SMR:Q96288 IntAct:Q96288 MINT:MINT-189223 STRING:Q96288
EnsemblPlants:AT1G06040.1 GeneID:837113 KEGG:ath:AT1G06040
TAIR:At1g06040 eggNOG:NOG313367 InParanoid:Q96288 OMA:PRCDICQ
PhylomeDB:Q96288 Genevestigator:Q96288 Uniprot:Q96288
Length = 248
Score = 215 (80.7 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 43/96 (44%), Positives = 55/96 (57%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------CEVCEQAP 56
CD C+ A ATV C AD A LC CD +IHAANKLAS+H R+ + C++C++
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64
Query: 57 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
A + C D A LC CD IH AN + H+R T
Sbjct: 65 AFIFCVEDRALLCRDCDESIHVANSRSANHQRFLAT 100
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 152 (58.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 34/67 (50%), Positives = 42/67 (62%)
Query: 263 KGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFA 322
+G+G+ G+ REARV RYREKR+ R F K IRY RK AE RPR+KGRF
Sbjct: 343 RGLGLHLGDA-----GDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 397
Query: 323 KRTDLEV 329
KR+ + V
Sbjct: 398 KRSSIGV 404
Score = 129 (50.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 36 ANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
A+ + + AR C+ C + A C AD A LC CD +HSANPLARRHERV
Sbjct: 6 ASAVGGKTARA--CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERV 57
Score = 127 (49.8 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARV 46
++ CDSC A +C AD AFLC CD +H+AN LA RH RV
Sbjct: 14 ARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERV 57
>TAIR|locus:2061330 [details] [associations]
symbol:STH "salt tolerance homologue" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0019904 "protein domain specific binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC007169 HOGENOM:HOG000239240 UniGene:At.24192
UniGene:At.69838 EMBL:AF323666 EMBL:AF325077 EMBL:AF370311
EMBL:AY063097 IPI:IPI00545007 PIR:A84720 RefSeq:NP_565722.1
ProteinModelPortal:Q9SID1 SMR:Q9SID1 IntAct:Q9SID1 STRING:Q9SID1
EnsemblPlants:AT2G31380.1 GeneID:817696 KEGG:ath:AT2G31380
TAIR:At2g31380 eggNOG:NOG279894 InParanoid:Q9SID1 OMA:CAKCDVE
PhylomeDB:Q9SID1 ProtClustDB:CLSN2682276 Genevestigator:Q9SID1
GermOnline:AT2G31380 Uniprot:Q9SID1
Length = 238
Score = 208 (78.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 41/109 (37%), Positives = 60/109 (55%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------CEVCEQAP 56
CD C+ A AT+ C AD A LC CD ++HAANKLAS+H R+++ C++C +
Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKA 64
Query: 57 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQ 105
A + C D A LC CD H+ N + H+R T ++ S++ Q
Sbjct: 65 AFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQ 113
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 156 (60.0 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 280 ADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 325
++REARV RYR+KRKNR FEK IRY RK A+ RPR+KGRF +R+
Sbjct: 276 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321
Score = 110 (43.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARV 46
+ C+ C + A +C +D AFLC CD +H+AN +A++H RV
Sbjct: 26 RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERV 68
Score = 105 (42.0 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 49 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
CE+C A C +D A LC CD +HSAN +A +HERV
Sbjct: 28 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERV 68
>TAIR|locus:2005624 [details] [associations]
symbol:BBX21 "B-box domain protein 21" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009641 "shade avoidance"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 GO:GO:0009641 HOGENOM:HOG000239240 EMBL:AC006434
EMBL:AB493536 IPI:IPI00536705 PIR:G96785 RefSeq:NP_177686.1
UniGene:At.34761 UniGene:At.69592 ProteinModelPortal:Q9LQZ7
SMR:Q9LQZ7 IntAct:Q9LQZ7 STRING:Q9LQZ7 EnsemblPlants:AT1G75540.1
GeneID:843890 KEGG:ath:AT1G75540 TAIR:At1g75540 eggNOG:NOG315170
InParanoid:Q9LQZ7 OMA:CDICQDK PhylomeDB:Q9LQZ7
ProtClustDB:CLSN2682536 Genevestigator:Q9LQZ7 GermOnline:AT1G75540
Uniprot:Q9LQZ7
Length = 331
Score = 204 (76.9 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 44/111 (39%), Positives = 59/111 (53%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV------------CEVCE 53
CD C A+VFC AD A LC CD ++H ANKLAS+H R + C++C+
Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQ 64
Query: 54 QAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVK 104
A + C+ D A LC CD IH+AN ++H+R +T S SS K
Sbjct: 65 DKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYK 115
Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 2 ASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHAR 45
+S LCD C+ A +FC+ D A LC +CD+ IHAAN+ +H R
Sbjct: 56 SSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDR 99
>TAIR|locus:2120207 [details] [associations]
symbol:BZS1 "BZS1" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IEP]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0080167
GO:GO:0010200 EMBL:AL035679 EMBL:AL161594 EMBL:AK118879
EMBL:BT028893 IPI:IPI00535007 PIR:T06067 RefSeq:NP_195618.2
UniGene:At.31120 ProteinModelPortal:Q0IGM7 SMR:Q0IGM7 PRIDE:Q0IGM7
EnsemblPlants:AT4G39070.1 GeneID:830062 KEGG:ath:AT4G39070
TAIR:At4g39070 eggNOG:NOG257043 HOGENOM:HOG000239240
InParanoid:Q0IGM7 OMA:DICGERR PhylomeDB:Q0IGM7
ProtClustDB:CLSN2915067 Genevestigator:Q0IGM7 GO:GO:0009741
Uniprot:Q0IGM7
Length = 242
Score = 180 (68.4 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 41/107 (38%), Positives = 53/107 (49%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV----------CEVCEQA 55
C C A+VFC AD A LC CD +H ANKLA +H R + C++C +
Sbjct: 5 CAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDICGER 64
Query: 56 PAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSA 102
A + C+ D A LC CD IH AN ++H R +T S SA
Sbjct: 65 RALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSA 111
Score = 128 (50.1 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 30/75 (40%), Positives = 40/75 (53%)
Query: 45 RVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT-PFYDSVDSSAV 103
++W C VC++ A V C AD AALC CDR +H AN LA +H R +T P + +
Sbjct: 2 KIW-CAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 104 KQGNGGVVNFLDEDR 118
G + F EDR
Sbjct: 61 C-GERRALLFCQEDR 74
>TAIR|locus:2122759 [details] [associations]
symbol:bbx23 "B-box domain protein 23" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AF096373 EMBL:AL161516 HOGENOM:HOG000239240
EMBL:AL049488 EMBL:AY122916 IPI:IPI00525768 PIR:T01973
RefSeq:NP_192762.1 UniGene:At.33641 ProteinModelPortal:O82617
SMR:O82617 EnsemblPlants:AT4G10240.1 GeneID:826615
KEGG:ath:AT4G10240 TAIR:At4g10240 eggNOG:NOG273282
InParanoid:O82617 OMA:TENSECS PhylomeDB:O82617
ProtClustDB:CLSN2915973 Genevestigator:O82617 Uniprot:O82617
Length = 162
Score = 167 (63.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 44/149 (29%), Positives = 66/149 (44%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------------CE 50
C+ C+ A A V C +D A LC CD K+H ANKL RH RV + C+
Sbjct: 5 CEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGAPLCD 64
Query: 51 VCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGV 110
+C++ + C D A LC CD IH+ N H+R ++ V ++ + +
Sbjct: 65 ICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGV--QVSDQSLTENSECS 118
Query: 111 VNFLDEDRYLDHVDGRSGDVSREEAEAAS 139
+F E + + S EE EA +
Sbjct: 119 TSFSSETYQIQSKVSLNSQYSSEETEAGN 147
>TAIR|locus:2199262 [details] [associations]
symbol:BBX27 "B-box domain protein 27" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016447 EMBL:AK117800 IPI:IPI00522806
PIR:C96705 RefSeq:NP_176986.1 UniGene:At.35557
ProteinModelPortal:Q9C9F4 EnsemblPlants:AT1G68190.1 GeneID:843148
KEGG:ath:AT1G68190 TAIR:At1g68190 eggNOG:NOG293044
HOGENOM:HOG000111890 InParanoid:Q9C9F4 OMA:CIADTAN PhylomeDB:Q9C9F4
ProtClustDB:CLSN2717503 Genevestigator:Q9C9F4 GermOnline:AT1G68190
Uniprot:Q9C9F4
Length = 356
Score = 178 (67.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKA 63
++C+ CK+ A V+C AD+A LC+ CD K+H+AN L+ RH R +C+ C+ P V C
Sbjct: 12 RVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFD 71
Query: 64 DAAALCVTCDRDIHSANPLARRHER 88
LC C+ H + H R
Sbjct: 72 HKMFLCHGCNDKFHGGG--SSEHRR 94
Score = 40 (19.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 251 SSAMTDITNPYGKGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEK 300
SS+ TD NPY V + +S R+ + R +EK++ R EK
Sbjct: 310 SSSETD--NPYSHSEEVIS---FCPSLSNNTRQKVITRLKEKKRARVEEK 354
>TAIR|locus:2207155 [details] [associations]
symbol:AT1G05290 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002684 GO:GO:0003700 EMBL:DQ446230 IPI:IPI00535628
RefSeq:NP_172021.2 UniGene:At.51486 EnsemblPlants:AT1G05290.1
GeneID:837025 KEGG:ath:AT1G05290 TAIR:At1g05290 OMA:FEILQIF
PhylomeDB:Q1PFY3 ProtClustDB:CLSN2920218 ArrayExpress:Q1PFY3
Genevestigator:Q1PFY3 Uniprot:Q1PFY3
Length = 369
Score = 136 (52.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 32/65 (49%), Positives = 40/65 (61%)
Query: 271 NQTVVQI---SAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR-TD 326
NQT V + S DRE RY EK+K RKF K IRY SRK+ A+ + R+KGRF K D
Sbjct: 293 NQTFVPVKGFSPKDREEAKKRYFEKKKKRKFGKQIRYESRKSTADTKKRMKGRFTKAGAD 352
Query: 327 LEVEP 331
+ +P
Sbjct: 353 YDYDP 357
Score = 75 (31.5 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 23 AFLCVNCDTKIHAANKLAS-RHARVWVCEVCEQAPAHVTCKADAAALCVTC 72
A LC+ CD K+H+ + + + ++R+ +C C A V LC +C
Sbjct: 10 ARLCLQCDLKLHSKSSVNNYNYSRIPLCNNCVSQTALVESLEQGLCLCQSC 60
Score = 49 (22.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 66 AALCVTCDRDIHSANPLAR-RHERVPV 91
A LC+ CD +HS + + + R+P+
Sbjct: 10 ARLCLQCDLKLHSKSSVNNYNYSRIPL 36
Score = 48 (22.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 5 LCDSCKSATATVFCRADSAFLCVNC 29
LC++C S TA V LC +C
Sbjct: 36 LCNNCVSQTALVESLEQGLCLCQSC 60
>TAIR|locus:2145698 [details] [associations]
symbol:AT5G14370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002688 EMBL:AY050892 EMBL:AY091296
IPI:IPI00522642 RefSeq:NP_568300.1 UniGene:At.5173
EnsemblPlants:AT5G14370.1 GeneID:831288 KEGG:ath:AT5G14370
TAIR:At5g14370 HOGENOM:HOG000151170 InParanoid:Q949T9 OMA:WVSYSEV
PhylomeDB:Q949T9 ProtClustDB:CLSN2689669 ArrayExpress:Q949T9
Genevestigator:Q949T9 Uniprot:Q949T9
Length = 339
Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 266 GVEAGN-------QTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIK 318
G EAGN +T ++ REA +LRY+EKR+NR F K IRY RK AE RPR+K
Sbjct: 271 GGEAGNLWAVPEMETTERLWRGHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVK 330
Query: 319 GRFAKRTD 326
GRF KR D
Sbjct: 331 GRFVKRED 338
>TAIR|locus:1009023318 [details] [associations]
symbol:BBX30 "B-box domain protein 30" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270
GO:GO:0005622 EMBL:DQ487602 IPI:IPI00657516 RefSeq:NP_001031645.1
UniGene:At.63271 EnsemblPlants:AT4G15248.1 GeneID:3769879
KEGG:ath:AT4G15248 TAIR:At4g15248 OMA:ELCGENA PhylomeDB:Q1G3I2
Genevestigator:Q2V3I2 Uniprot:Q1G3I2
Length = 117
Score = 133 (51.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQ 54
C+ C ATV+C AD+AFLC CD +H+AN LA RH R +C C +
Sbjct: 32 CELC-GENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRK 79
Score = 123 (48.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 33/81 (40%), Positives = 43/81 (53%)
Query: 49 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNG 108
CE+C + A V C+ADAA LC CDR +HSAN LARRH R + + + N
Sbjct: 32 CELCGEN-ATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNF 90
Query: 109 GVVNFLDEDRYLDHVDGRSGD 129
VV L E R + ++ S D
Sbjct: 91 NVV--LPEIRMIARIEEHSSD 109
>TAIR|locus:2007482 [details] [associations]
symbol:AT1G07050 "AT1G07050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AY085907 EMBL:AK176556 EMBL:AB493438
IPI:IPI00532995 RefSeq:NP_563778.1 UniGene:At.42316 STRING:Q8LDM8
EnsemblPlants:AT1G07050.1 GeneID:837216 KEGG:ath:AT1G07050
TAIR:At1g07050 eggNOG:NOG283732 HOGENOM:HOG000090331
InParanoid:Q8LDM8 OMA:NMRREAS PhylomeDB:Q8LDM8
ProtClustDB:CLSN2687713 ArrayExpress:Q8LDM8 Genevestigator:Q8LDM8
Uniprot:Q8LDM8
Length = 195
Score = 139 (54.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 28/43 (65%), Positives = 32/43 (74%)
Query: 282 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 324
REA VLRY+EKR++R F K IRY RK A+ RPR KGRF KR
Sbjct: 151 REASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>TAIR|locus:2095562 [details] [associations]
symbol:BBX31 "B-box domain protein 31" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010224 "response to UV-B" evidence=IEP;RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] InterPro:IPR000315
Pfam:PF00643 SMART:SM00336 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 GO:GO:0010224
EMBL:AB028622 EMBL:AY086564 EMBL:AB493627 IPI:IPI00531471
RefSeq:NP_188827.1 UniGene:At.37979 ProteinModelPortal:Q9LRM4
EnsemblPlants:AT3G21890.1 GeneID:821744 KEGG:ath:AT3G21890
TAIR:At3g21890 eggNOG:NOG259331 HOGENOM:HOG000090727
InParanoid:Q9LRM4 OMA:CEADSAF PhylomeDB:Q9LRM4
ProtClustDB:CLSN2685268 Genevestigator:Q9LRM4 Uniprot:Q9LRM4
Length = 121
Score = 131 (51.2 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQ 54
C+ C A+VFC ADSAFLC CD +H AN LA RH R +C C++
Sbjct: 31 CELC-DGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQK 78
Score = 107 (42.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 49 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHER 88
CE+C+ A V C+AD+A LC CDR +H AN LA RH R
Sbjct: 31 CELCD-GDASVFCEADSAFLCRKCDRWVHGANFLAWRHVR 69
>TAIR|locus:2062749 [details] [associations]
symbol:AT2G46670 "AT2G46670" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 GenomeReviews:CT485783_GR UniGene:At.65052
EMBL:AB493594 IPI:IPI00540845 RefSeq:NP_182190.2
EnsemblPlants:AT2G46670.1 GeneID:819279 KEGG:ath:AT2G46670
TAIR:At2g46670 PhylomeDB:C0SV91 Genevestigator:Q3EBF0
Uniprot:C0SV91
Length = 183
Score = 132 (51.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 278 SAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 323
S + REA ++++R KRK+R F+K +RY SRK AE RPR+KG+F +
Sbjct: 128 SRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 173
>TAIR|locus:2175564 [details] [associations]
symbol:CIA2 "chloroplast import apparatus 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEP] [GO:0045036 "protein targeting to chloroplast"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR010402
Pfam:PF06203 PROSITE:PS51017 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 EMBL:AB023042 EMBL:AF359387
EMBL:AF372929 EMBL:AY078036 EMBL:AK316813 EMBL:AK221521
IPI:IPI00517190 IPI:IPI00544089 IPI:IPI00656805
RefSeq:NP_001032087.1 RefSeq:NP_568852.2 RefSeq:NP_851201.1
UniGene:At.9681 IntAct:Q9LU68 STRING:Q9LU68 PaxDb:Q9LU68
PRIDE:Q9LU68 EnsemblPlants:AT5G57180.2 GeneID:835824
KEGG:ath:AT5G57180 GeneFarm:2245 TAIR:At5g57180 eggNOG:NOG245310
HOGENOM:HOG000238782 InParanoid:Q9LU68 OMA:YLRSLMV PhylomeDB:Q9LU68
ProtClustDB:CLSN2680548 Genevestigator:Q9LU68 GO:GO:0045036
Uniprot:Q9LU68
Length = 435
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/92 (45%), Positives = 54/92 (58%)
Query: 249 DGS-SAMTDITNPYGKGV-GVEAG--NQTVVQISA-AD---REARVLRYREKRKNRKFEK 300
DG A +D T+P+ + G EA N + QI D REA VLRY+EKR+ R F K
Sbjct: 342 DGVLEAWSDKTSPFPDEIQGSEAVDVNARLAQIDLFGDSGMREASVLRYKEKRRTRLFSK 401
Query: 301 TIRYASRKAYAEMRPRIKGRFAKRTDLEVEPA 332
IRY RK A+ RPR+KGRF +R + E P+
Sbjct: 402 KIRYQVRKLNADQRPRMKGRFVRRPN-ESTPS 432
>TAIR|locus:2177911 [details] [associations]
symbol:AT5G41380 "AT5G41380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AY800647 EMBL:AY924846
IPI:IPI00519705 RefSeq:NP_198954.2 UniGene:At.51252
EnsemblPlants:AT5G41380.1 GeneID:834140 KEGG:ath:AT5G41380
TAIR:At5g41380 HOGENOM:HOG000090374 InParanoid:Q5Q0A4 OMA:VVEIPNI
PhylomeDB:Q5Q0A4 ProtClustDB:CLSN2681537 Genevestigator:Q5Q0A4
Uniprot:Q5Q0A4
Length = 307
Score = 145 (56.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 268 EAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDL 327
E N V + SA +R+ ++ +YR KR R F KTI+YA RK A+ RPRI+GRFA R D
Sbjct: 201 EEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFA-RNDE 259
Query: 328 EVE 330
VE
Sbjct: 260 VVE 262
>TAIR|locus:2090374 [details] [associations]
symbol:ASML2 "activator of spomin::LUC2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0010182 "sugar mediated signaling pathway" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0010182
EMBL:AC023838 EMBL:AP000385 EMBL:AY085594 EMBL:AY885244
IPI:IPI00524505 RefSeq:NP_566437.1 UniGene:At.39532 STRING:Q9LDL9
EnsemblPlants:AT3G12890.1 GeneID:820472 KEGG:ath:AT3G12890
TAIR:At3g12890 eggNOG:NOG274941 HOGENOM:HOG000152986
InParanoid:Q9LDL9 OMA:FARNNDT PhylomeDB:Q9LDL9
ProtClustDB:CLSN2914977 Genevestigator:Q9LDL9 Uniprot:Q9LDL9
Length = 251
Score = 137 (53.3 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 266 GVEAGNQTVV-QISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 324
G++A T V + S +R+ R++RY +K+ R F KTI+Y RK A+ R R++GRFA+
Sbjct: 122 GIQAEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFARN 181
Query: 325 TDL-EVEP 331
D E +P
Sbjct: 182 NDTCEEQP 189
>TAIR|locus:2131709 [details] [associations]
symbol:BBX28 "B-box domain protein 28" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 SMART:SM00336 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AL030978 IPI:IPI00524555 PIR:T05755
RefSeq:NP_194461.1 UniGene:At.28344 EnsemblPlants:AT4G27310.1
GeneID:828839 KEGG:ath:AT4G27310 TAIR:At4g27310 eggNOG:NOG263097
HOGENOM:HOG000115162 InParanoid:O81834 OMA:SAFKSTV PhylomeDB:O81834
ProtClustDB:CLSN2916189 Genevestigator:O81834 Uniprot:O81834
Length = 223
Score = 135 (52.6 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 40/142 (28%), Positives = 57/142 (40%)
Query: 4 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQ-APAHVTCK 62
K CD C + A ++C +D A LC +CD K+H AN L ++H R +C C+ P T
Sbjct: 3 KKCDLC-NGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGL 61
Query: 63 ADAAALCVTCDRDIHSANPLARRHERV--------PVTPFYDSVDSSAVKQGNGGVVNFL 114
V C+ + N R RV V F D G+G
Sbjct: 62 RLGPTFSV-CESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAESY 120
Query: 115 DEDRYLDHVDGRSGDVSREEAE 136
D+D D + S D ++ E
Sbjct: 121 DDDEEEDEDEEYSDDEDEDDDE 142
>TAIR|locus:2195518 [details] [associations]
symbol:AT1G63820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002684 GenomeReviews:CT485782_GR
HOGENOM:HOG000090374 ProtClustDB:CLSN2681537 EMBL:AK176159
IPI:IPI00542615 RefSeq:NP_176567.2 UniGene:At.50956
EnsemblPlants:AT1G63820.1 GeneID:842685 KEGG:ath:AT1G63820
TAIR:At1g63820 eggNOG:NOG240378 InParanoid:Q67ZF8 OMA:TQRNFTK
PhylomeDB:Q67ZF8 ArrayExpress:Q67ZF8 Genevestigator:Q67ZF8
Uniprot:Q67ZF8
Length = 293
Score = 138 (53.6 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 274 VVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPAD 333
V + S+ +R+ ++ +YR KR R F KTI+YA RK A+ RPR++GRFA+ ++ P
Sbjct: 184 VGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEVFENPKI 243
Query: 334 RSS 336
SS
Sbjct: 244 ASS 246
Score = 37 (18.1 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 15/60 (25%), Positives = 22/60 (36%)
Query: 114 LDEDRYLDHVDGRSGDVSR-EEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLDLDY 172
+D D Y+ DG S S + + DL PY+ P MD + L +
Sbjct: 1 MDSDLYI--FDGSSSSSSICHSTDPDMFSSDTTTTTDL---YCNNPYLNPSMDDHQSLSF 55
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 262 GKGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 321
G G G +GN + + REA + ++R+KRK R F K +RY SRK AE RPR++G+F
Sbjct: 650 GSGSGSGSGN-LADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQF 708
Query: 322 AKRTDLEVEPAD 333
++T + D
Sbjct: 709 VRKTAAATDDND 720
>TAIR|locus:2132902 [details] [associations]
symbol:AT4G27900 "AT4G27900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002687 EMBL:AL161572 EMBL:AL035524 EMBL:AY062469
EMBL:AY093297 IPI:IPI00527124 PIR:T02891 RefSeq:NP_194519.1
RefSeq:NP_849461.1 UniGene:At.26998 IntAct:Q9SUE8 PRIDE:Q9SUE8
EnsemblPlants:AT4G27900.1 EnsemblPlants:AT4G27900.2 GeneID:828903
KEGG:ath:AT4G27900 TAIR:At4g27900 HOGENOM:HOG000241629
InParanoid:Q9SUE8 OMA:ISCTSED PhylomeDB:Q9SUE8
ProtClustDB:CLSN2685530 Genevestigator:Q9SUE8 Uniprot:Q9SUE8
Length = 261
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 271 NQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLE 328
++ ++ ++ DR ++ RYR K+ R F + I+YA RKA A+ +PRI+GRFAK +++
Sbjct: 203 DRIIISCTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEMQ 260
>TAIR|locus:2147274 [details] [associations]
symbol:BBX29 "B-box domain protein 29" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR000315 SMART:SM00336
EMBL:CP002688 GO:GO:0009555 GO:GO:0009409 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000115162
ProtClustDB:CLSN2916189 EMBL:BT012358 EMBL:AK221519 IPI:IPI00528573
RefSeq:NP_200258.2 UniGene:At.43303 STRING:Q6NLH4
EnsemblPlants:AT5G54470.1 GeneID:835535 KEGG:ath:AT5G54470
TAIR:At5g54470 eggNOG:NOG303512 InParanoid:Q6NLH4 OMA:CESCLAR
Genevestigator:Q6NLH4 Uniprot:Q6NLH4
Length = 215
Score = 131 (51.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/96 (31%), Positives = 49/96 (51%)
Query: 1 MASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVT 60
M K C+ C A ++C +D A LC +CD K+H AN L ++H R +C C+ +H
Sbjct: 1 MGKKKCELC-CGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQ---SHTP 56
Query: 61 CKADA------AALCVTC-DRDIHSANPLARRHERV 89
KA ++C +C R ++ + LA R + +
Sbjct: 57 WKASGLNLGPTVSICESCLARKKNNNSSLAGRDQNL 92
>TAIR|locus:2018344 [details] [associations]
symbol:AT1G04500 "AT1G04500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:DQ446226 EMBL:AB493431
IPI:IPI00533670 RefSeq:NP_171944.2 UniGene:At.42446
EnsemblPlants:AT1G04500.1 GeneID:839510 KEGG:ath:AT1G04500
TAIR:At1g04500 HOGENOM:HOG000239716 InParanoid:Q1PFY7 OMA:SPSCSFL
PhylomeDB:Q1PFY7 ProtClustDB:CLSN2680683 Genevestigator:Q1PFY7
Uniprot:Q1PFY7
Length = 386
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 274 VVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPAD 333
V ++SA R+ ++ RY +KR R F K I+YA RK A+ RPR++GRFAK + EP
Sbjct: 280 VGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFG-EPNR 338
Query: 334 RSSS 337
++ S
Sbjct: 339 QACS 342
>TAIR|locus:2178441 [details] [associations]
symbol:AT5G53420 "AT5G53420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 EMBL:AY099753 EMBL:BT000280 IPI:IPI00547333
RefSeq:NP_568793.1 UniGene:At.8948 PRIDE:Q8L602
EnsemblPlants:AT5G53420.1 GeneID:835423 KEGG:ath:AT5G53420
TAIR:At5g53420 InParanoid:Q8L602 OMA:TINENQD PhylomeDB:Q8L602
ProtClustDB:CLSN2690008 ArrayExpress:Q8L602 Genevestigator:Q8L602
Uniprot:Q8L602
Length = 264
Score = 130 (50.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 262 GKGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 321
G G+ ++ +V ++ DR ++ RY+ K+ R F + I+YA RKA A+ +PR++GRF
Sbjct: 198 GAGLVQSPLDRIIVSCTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRF 257
Query: 322 AK 323
AK
Sbjct: 258 AK 259
>TAIR|locus:2168083 [details] [associations]
symbol:AT5G59990 "AT5G59990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015475 EMBL:AY924872
IPI:IPI00537727 RefSeq:NP_200807.1 UniGene:At.55631
EnsemblPlants:AT5G59990.1 GeneID:836121 KEGG:ath:AT5G59990
TAIR:At5g59990 HOGENOM:HOG000064609 InParanoid:Q9FJD8 OMA:RESSTVW
PhylomeDB:Q9FJD8 ProtClustDB:CLSN2686501 ArrayExpress:Q9FJD8
Genevestigator:Q9FJD8 Uniprot:Q9FJD8
Length = 241
Score = 127 (49.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 252 SAMTDITNPYGKGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYA 311
S+ + + + + + G + S +++ ++ +YR KR R F K I+Y RK A
Sbjct: 133 SSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIEKYRSKRNLRNFNKRIKYECRKTLA 192
Query: 312 EMRPRIKGRFAKRTDL-EVEPADRSSSIYG 340
+ RPRI+GRFA+ ++ + E D ++ G
Sbjct: 193 DSRPRIRGRFARNDEISQQEQVDVMEAVVG 222
>TAIR|locus:2051099 [details] [associations]
symbol:AT2G33350 "AT2G33350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 ProtClustDB:CLSN2680683 EMBL:AY600556 IPI:IPI00520380
RefSeq:NP_180893.2 UniGene:At.50819 EnsemblPlants:AT2G33350.1
GeneID:817898 KEGG:ath:AT2G33350 TAIR:At2g33350 InParanoid:Q6E267
OMA:GSEINKP PhylomeDB:Q6E267 Genevestigator:Q6E267 Uniprot:Q6E267
Length = 410
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 274 VVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEP 331
V ++S R+ ++ RY +KR R F K I+YA RK A+ RPR++GRFAK + EP
Sbjct: 303 VGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFG-EP 359
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 132 (51.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 278 SAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 323
S + REA ++++R KRK+R F+K +RY SRK AE RPR+KG+F +
Sbjct: 413 SRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 458
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 25 LCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAAL 68
L + D HA + AS+H E CE + H + A A+
Sbjct: 159 LTLRDDPTAHAQSLPASQHNLEDTDETCEDSRYHSDQGSGAQAI 202
>TAIR|locus:2092940 [details] [associations]
symbol:BBX32 "B-box domain protein 32" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0009785 "blue
light signaling pathway" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0009909 "regulation of
flower development" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003700 EMBL:AP000604
GO:GO:0009640 GO:GO:0010200 GO:GO:0009909 EMBL:BT005244
EMBL:AK117844 IPI:IPI00537563 RefSeq:NP_188752.1 UniGene:At.38107
IntAct:Q9LJB7 EnsemblPlants:AT3G21150.1 GeneID:821667
KEGG:ath:AT3G21150 TAIR:At3g21150 eggNOG:NOG279642
HOGENOM:HOG000090878 InParanoid:Q9LJB7 OMA:IISAVEM PhylomeDB:Q9LJB7
ProtClustDB:CLSN2915650 Genevestigator:Q9LJB7 Uniprot:Q9LJB7
Length = 225
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 6 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCE 53
C+ C A A + C ADSAFLC +CD K HA+N L +RH R +C C+
Sbjct: 5 CELC-GAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCK 51
>TAIR|locus:2195643 [details] [associations]
symbol:BBX26 "B-box domain protein 26" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
EMBL:AC004473 IPI:IPI00523867 PIR:T02277 RefSeq:NP_176231.1
UniGene:At.52283 ProteinModelPortal:O80748
EnsemblPlants:AT1G60250.1 GeneID:842320 KEGG:ath:AT1G60250
TAIR:At1g60250 eggNOG:NOG305480 HOGENOM:HOG000115139 OMA:FERSCHG
PhylomeDB:O80748 ProtClustDB:CLSN2913661 Genevestigator:O80748
Uniprot:O80748
Length = 251
Score = 124 (48.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 3 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCK 62
+++C +C+ TA + C ++ C+ CD H N + + H R +C+ C P+ + C
Sbjct: 2 AQVCHTCRHVTAVIHCVTEALNFCLTCDNLRHH-NNIHAEHVRYQLCDNCSMYPSILFCY 60
Query: 63 ADAAALCVTC 72
D LC +C
Sbjct: 61 EDGMVLCQSC 70
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 129 (50.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 269 AGN--QTVVQISAADR-EARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 324
AGN V+++ DR E +L++R KR R F+K IRY +RK AE RPR+KG+F ++
Sbjct: 517 AGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 575
Score = 38 (18.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 19/79 (24%), Positives = 31/79 (39%)
Query: 95 YDSVDSSAVKQGNGGVVNFLDE--DRYLDHVDGRSGDVSREEAEAASWLLPI-PKVADLN 151
+D V S F D+ DR L + + G++S +E E + P+ + L
Sbjct: 156 FDLVGSDQSDPNTNSTNLFSDDTDDRSLRSTNPQRGNLSHQENEWSVATAPVHARDGGLG 215
Query: 152 T-GQAQEPYVFPDMDPYLD 169
G A ++P LD
Sbjct: 216 ADGTATSSLAVTAIEPPLD 234
>TAIR|locus:2120850 [details] [associations]
symbol:CIL "AT4G25990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002687 HOGENOM:HOG000238782
ProtClustDB:CLSN2680548 EMBL:AB493701 IPI:IPI00538830
RefSeq:NP_849445.1 UniGene:At.2953 EnsemblPlants:AT4G25990.2
GeneID:828705 KEGG:ath:AT4G25990 TAIR:At4g25990 eggNOG:NOG266168
OMA:ISTRRPR PhylomeDB:C0SVJ8 ArrayExpress:C0SVJ8
Genevestigator:C0SVJ8 Uniprot:C0SVJ8
Length = 409
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 282 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIK 318
REA VLRY+EKR+NR F K IRY RK A+ RPR+K
Sbjct: 341 REASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMK 377
>TAIR|locus:505006360 [details] [associations]
symbol:ZML1 "ZIM-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000679 InterPro:IPR010402
InterPro:IPR013088 InterPro:IPR018467 Pfam:PF00320 Pfam:PF09425
PROSITE:PS00344 PROSITE:PS50114 PROSITE:PS51017 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AB023045
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:AB119060 EMBL:AY042817 EMBL:AY064628
EMBL:AY085109 EMBL:AK118169 IPI:IPI00528960 IPI:IPI00530061
RefSeq:NP_566676.1 RefSeq:NP_850618.1 UniGene:At.20286
ProteinModelPortal:Q8GXL7 SMR:Q8GXL7 IntAct:Q8GXL7
EnsemblPlants:AT3G21175.1 GeneID:821670 KEGG:ath:AT3G21175
GeneFarm:3917 TAIR:At3g21175 eggNOG:NOG303027 HOGENOM:HOG000238783
InParanoid:Q8GXL7 OMA:NGRMHIG PhylomeDB:Q8GXL7
ProtClustDB:CLSN2688624 Genevestigator:Q8GXL7 GermOnline:AT3G21175
InterPro:IPR010399 Pfam:PF06200 SMART:SM00979 PROSITE:PS51320
Uniprot:Q8GXL7
Length = 297
Score = 113 (44.8 bits), Expect = 0.00060, P = 0.00060
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 273 TVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 321
T ++S R A +LR+REKRK R F+KTIRY RK A R KG+F
Sbjct: 134 TPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQF 182
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 332 0.00090 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 616 (65 KB)
Total size of DFA: 233 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.21u 0.13s 26.34t Elapsed: 00:00:01
Total cpu time: 26.21u 0.13s 26.34t Elapsed: 00:00:01
Start: Fri May 10 17:20:49 2013 End: Fri May 10 17:20:50 2013