Your job contains 1 sequence.
>019032
MGRLKQLRIFNGVLKDKASLIKTTLSTKRQTSFIRRAILRATTHGSSSPPSINRIDAVIS
SGNGSRPRACACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLGGR
NFLNLSEFHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGYHLSSSDSKKNHKDKEEKI
FALLSSDLLIEIDALVGFVQEISNVPNSLHLQRNNLVYEIVRLVSEDYRLIQREISLRVV
ELDERMTSLSVDQLTLFMSALKKFEDCKERLSLLFVNRKKNDGLWHLIGETKMKIETMMN
KKAEEMALVRIMKRDETREWSRQPFRFTSDGSWLGLDRVSLTVSTVR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019032
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2140084 - symbol:AT4G40080 species:3702 "Arabi... 586 5.9e-57 1
TAIR|locus:2142409 - symbol:AT5G10410 species:3702 "Arabi... 317 1.9e-28 1
TAIR|locus:2168287 - symbol:AT5G65370 species:3702 "Arabi... 264 7.8e-23 1
TAIR|locus:2049587 - symbol:AT2G01600 species:3702 "Arabi... 226 1.6e-16 1
TAIR|locus:2006727 - symbol:AT1G14910 species:3702 "Arabi... 223 5.8e-16 1
TAIR|locus:2165615 - symbol:AT5G57200 species:3702 "Arabi... 220 1.0e-15 1
TAIR|locus:2182432 - symbol:AT5G35200 species:3702 "Arabi... 205 6.0e-14 1
TAIR|locus:2120780 - symbol:AT4G25940 species:3702 "Arabi... 204 9.5e-14 1
TAIR|locus:505006543 - symbol:AT4G32285 species:3702 "Ara... 194 1.6e-12 1
TAIR|locus:2040115 - symbol:AT2G25430 species:3702 "Arabi... 194 1.7e-12 2
TAIR|locus:2132382 - symbol:AT4G02650 species:3702 "Arabi... 174 2.9e-10 1
TAIR|locus:2007524 - symbol:AT1G03050 species:3702 "Arabi... 164 9.9e-09 2
TAIR|locus:2205558 - symbol:AT1G05020 species:3702 "Arabi... 145 3.7e-07 2
TAIR|locus:2032995 - symbol:AT1G25240 species:3702 "Arabi... 120 0.00015 1
>TAIR|locus:2140084 [details] [associations]
symbol:AT4G40080 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0010167 "response to nitrate" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR011417
Pfam:PF07651 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005543 GO:GO:0006897 GO:GO:0005905 GO:GO:0030136
EMBL:AL161596 Gene3D:1.25.40.90 InterPro:IPR008942
InterPro:IPR013809 SUPFAM:SSF48464 PROSITE:PS50942 EMBL:AL035708
EMBL:AY088656 IPI:IPI00522786 PIR:A85475 RefSeq:NP_195718.1
UniGene:At.27784 UniGene:At.49774 ProteinModelPortal:Q8L936
PRIDE:Q8L936 EnsemblPlants:AT4G40080.1 GeneID:830171
KEGG:ath:AT4G40080 TAIR:At4g40080 eggNOG:NOG290906
HOGENOM:HOG000116507 InParanoid:Q8L936 OMA:WELSSWV PhylomeDB:Q8L936
ProtClustDB:CLSN2685903 Genevestigator:Q8L936 GermOnline:AT4G40080
Uniprot:Q8L936
Length = 365
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 140/361 (38%), Positives = 198/361 (54%)
Query: 1 MGRLKQLRIFNGVLKDKASLIKTTL---STKRQTSFIRRAILRATTHGSSSPPSINRIDA 57
MGR+ G +KDKAS K L +TK +T ++LRATTH S+PP +
Sbjct: 1 MGRITSFADLIGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAV 60
Query: 58 VISSGNGSRPRACACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTL 117
++S+G GSR A + ++++M+RLH T D VALK L IH+I+ FIL+DQLS+FP
Sbjct: 61 ILSAGTGSRATASSAVESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFPAS 120
Query: 118 GGRNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGYHLXXXXXXXXXXXXX 177
GGRN+L LS F D+ P WELS+W+RWYA LE L+ SR++G+ +
Sbjct: 121 GGRNYLKLSAFRDEKSPLMWELSSWVRWYALYLEHLLSTSRIMGFFISSTSSTIHKEEYE 180
Query: 178 XXIFALLSSDLLIEIDALVGFVQEISNVPNSLHLQRNNLVYEIVRLVSEDYRLIQREISL 237
+ +L +SDLL EIDALVG ++E +P+ +L +I +LV EDY E+
Sbjct: 181 EMVSSLTNSDLLREIDALVGLLEEACKIPDLPFSGGKSLADKITQLVGEDYVSSINELYT 240
Query: 238 RVVELDERMTSLSVDQLTLFMSALKKFEDCKERLS-LLFVNRKKN--DGLWHLIGETKMK 294
R E ER +LS + ALK+ E CKERLS + N K+ DG W L+ E K
Sbjct: 241 RFNEFKERSNTLSFGDTIELVCALKRLESCKERLSEICHGNWKRGWIDGFWGLVLEVKGI 300
Query: 295 IETMMNKKAE-EMALVRIMKRDETREWSR----------QPFRFTSDGSWLGLDRVSLTV 343
I + + + E ++V KRD+ E +R P RF+S G + +DR + V
Sbjct: 301 IGNLEDNYGQIEKSIVGFGKRDKGYESARFTDRLIIGYSNPVRFSS-GRFSNVDRFNFPV 359
Query: 344 S 344
S
Sbjct: 360 S 360
>TAIR|locus:2142409 [details] [associations]
symbol:AT5G10410 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011417 Pfam:PF07651 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005543 GO:GO:0006897
GO:GO:0005905 GO:GO:0030136 EMBL:AL353995 Gene3D:1.25.40.90
InterPro:IPR008942 InterPro:IPR013809 SUPFAM:SSF48464
PROSITE:PS50942 EMBL:BT001986 IPI:IPI00531585 PIR:T49998
RefSeq:NP_196603.1 UniGene:At.32383 ProteinModelPortal:Q8H0W9
EnsemblPlants:AT5G10410.1 GeneID:830905 KEGG:ath:AT5G10410
TAIR:At5g10410 eggNOG:NOG315411 HOGENOM:HOG000111297
InParanoid:Q8H0W9 OMA:LELSQWI PhylomeDB:Q8H0W9
ProtClustDB:CLSN2686393 Genevestigator:Q8H0W9 Uniprot:Q8H0W9
Length = 338
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 108/316 (34%), Positives = 153/316 (48%)
Query: 12 GVLKDKASLIKTTLSTK---RQTSFIRRAILRATTHGSSSPPSINRIDAVISSGNGSRPR 68
G KDKAS+ K L +I A+L++TT + PP+ + + AVIS N SR
Sbjct: 10 GKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAVISYSN-SR-Y 67
Query: 69 ACACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLG-GRNFLNLSE 127
A A A + RL T++ VA K L IH +I K S +D+ F LG GRN L L+E
Sbjct: 68 APAAFSAALWRLRVTKNAIVATKSLIVIHKLI-KSS---RDK---FEGLGHGRNNLKLNE 120
Query: 128 FHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGYHLXXXXXXXXXXXXXXXIFALLSSD 187
F D S + ELS WIRWY L++ V +VLG + + +
Sbjct: 121 FSDKSSNLTLELSQWIRWYGQYLDRLSWVPKVLGSFPNLLVNPKDKVEEKDRVSSYQTGY 180
Query: 188 LLIEIDALVGFVQEISNVPNSLHLQRNNLVYEIVRLVSEDYRLIQREISLRVVELDERMT 247
++ + D+LV F + I P + +N +V EI LV EDY I R + +R+ L ER+
Sbjct: 181 IIRQTDSLVSFFEHICTRPEIPPMFQNKIVDEIRELVIEDYFKIVRLVMVRLQVLFERLI 240
Query: 248 SLSVDQ-----LTLFMSALKKFEDCKERLSLLFVN-RKKNDGLWHLIGETKMKIETMMNK 301
V L F L + +CKE LS LF R+ D W L+ K + E NK
Sbjct: 241 KPGVKPIGDLGLNDFSLLLVRLVECKESLSGLFWRCRRLADDFWCLVEMLKAETEKKNNK 300
Query: 302 KAEEMA-LVRIMKRDE 316
+ E+A LV+ +D+
Sbjct: 301 QMIELAGLVQTTVKDD 316
>TAIR|locus:2168287 [details] [associations]
symbol:AT5G65370 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011417 Pfam:PF07651 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005543 GO:GO:0006897
GO:GO:0005905 GO:GO:0030136 EMBL:AB011479 Gene3D:1.25.40.90
InterPro:IPR008942 InterPro:IPR013809 SUPFAM:SSF48464
PROSITE:PS50942 HOGENOM:HOG000111297 ProtClustDB:CLSN2686393
IPI:IPI00518939 RefSeq:NP_201340.1 UniGene:At.55702
ProteinModelPortal:Q9FKQ2 PaxDb:Q9FKQ2 EnsemblPlants:AT5G65370.1
GeneID:836662 KEGG:ath:AT5G65370 TAIR:At5g65370 eggNOG:NOG317123
OMA:FEHISDR PhylomeDB:Q9FKQ2 Genevestigator:Q9FKQ2
GermOnline:AT5G65370 Uniprot:Q9FKQ2
Length = 295
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 91/308 (29%), Positives = 152/308 (49%)
Query: 1 MGRLKQLRIFNGVLKDKASLIKTT---LSTKRQTSFIRRAILRATTHGSSSPPS---INR 54
MG+L L NG+LKD+AS +K L + I A+L+AT+H S++PPS +
Sbjct: 1 MGKLATL---NGILKDEASQMKLNVVHLCSSVNAKTIDLALLKATSHTSNNPPSDKYVTF 57
Query: 55 IDAVISSGNGSRPRACACIQALMDRLHGTRDTFVALKCLYTIHNIITKDS-FILKDQL-- 111
+ + I + G P + A++ RL T D VA KCL +H ++ +S + +D L
Sbjct: 58 LQSTIDTCYG--PDT---VDAILHRLRVTTDVCVAAKCLILLHKMVKSESGYNGEDSLRN 112
Query: 112 -----SIFPTLGGRNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGYHLXX 166
++ T GG N L L++ + +S + EL+ W++WY L+ L+++ VLG
Sbjct: 113 NINHRTLIYTQGGSN-LKLNDLNVNSSRFTRELTPWVQWYKQYLDCYLSIAEVLGITPNI 171
Query: 167 XXXXXXXXXXXXXIFALLSSDLLIEIDALVGFVQEISNVPNSLHLQRNNLVYEIVRLVSE 226
+ + +L +ID LV + IS+ P + + N +V E+ L+ +
Sbjct: 172 KEKNEDKRLETQRVSSYPMDCILKQIDFLVELFEHISDRPKAPQSKLNKIVIEMTELMVQ 231
Query: 227 DYRLIQREISLRVVELDERMTSLSVDQLTLFMSALKKFEDCKERLSLLFVNRKKN--DGL 284
DY R + +R EL+ R+ ++L + L+K E+CKE LS F R K
Sbjct: 232 DYFSAIRLMRIRFEELNVRVAK--PNEL---VPVLEKLENCKEGLSE-FSWRSKYLIADF 285
Query: 285 WHLIGETK 292
W+L+ + K
Sbjct: 286 WYLVSKLK 293
>TAIR|locus:2049587 [details] [associations]
symbol:AT2G01600 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0030276
"clathrin binding" evidence=IEA] [GO:0048268 "clathrin coat
assembly" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR011417 InterPro:IPR014712
Pfam:PF07651 GO:GO:0005886 GO:GO:0005794 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005545 GO:GO:0006897 GO:GO:0005905
GO:GO:0030136 GO:GO:0030118 GO:GO:0048268 Gene3D:1.20.58.150
Gene3D:1.25.40.90 InterPro:IPR008942 InterPro:IPR013809
SMART:SM00273 SUPFAM:SSF48464 PROSITE:PS50942 eggNOG:NOG267212
EMBL:AC006069 EMBL:AC005560 HOGENOM:HOG000238535 EMBL:AF424593
EMBL:AY096639 EMBL:AY133828 EMBL:AY087211 IPI:IPI00529379
PIR:G84426 RefSeq:NP_565267.1 UniGene:At.13456
ProteinModelPortal:Q8LBH2 SMR:Q8LBH2 PaxDb:Q8LBH2 PRIDE:Q8LBH2
EnsemblPlants:AT2G01600.1 GeneID:814689 KEGG:ath:AT2G01600
TAIR:At2g01600 InParanoid:Q8LBH2 OMA:AKHEAIT PhylomeDB:Q8LBH2
ProtClustDB:CLSN2916959 Genevestigator:Q8LBH2 GermOnline:AT2G01600
Uniprot:Q8LBH2
Length = 571
Score = 226 (84.6 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 61/166 (36%), Positives = 86/166 (51%)
Query: 1 MGRLKQLRIFNGVLKD--KASLIKTTLSTKRQTSFIRRAILRATTHGSSSPPSINRIDAV 58
MG L+ R G LKD K L++ + + + AI++AT H PP + +
Sbjct: 1 MGTLQSWRKAYGALKDSTKVGLVRVN----SEYADLDVAIVKATNH-VECPPKDRHLRKI 55
Query: 59 ISSGNGSRPRA--CACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPT 116
++ + +R RA CI AL RLH TR+ VALK L IH ++ + +++L F
Sbjct: 56 FAATSVTRARADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQ 115
Query: 117 LGGRNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGY 162
G L LS F DDS P +W+ SAW+R YA LE+ L RVL Y
Sbjct: 116 RG--RILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKY 159
>TAIR|locus:2006727 [details] [associations]
symbol:AT1G14910 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0030118
"clathrin coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=IEA] [GO:0048268 "clathrin coat assembly" evidence=IEA]
InterPro:IPR011417 InterPro:IPR014712 Pfam:PF07651 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0005545 GO:GO:0006897
GO:GO:0005905 GO:GO:0030136 GO:GO:0030118 GO:GO:0048268
Gene3D:1.20.58.150 Gene3D:1.25.40.90 InterPro:IPR008942
InterPro:IPR013809 SMART:SM00273 SUPFAM:SSF48464 PROSITE:PS50942
eggNOG:NOG267212 EMBL:AC006917 HOGENOM:HOG000238535 EMBL:Y10863
EMBL:Y10864 EMBL:Y10986 EMBL:Y10987 EMBL:AY096496 IPI:IPI00523404
PIR:G86282 PIR:T52617 PIR:T52618 RefSeq:NP_172944.1
UniGene:At.25101 ProteinModelPortal:P94017 PaxDb:P94017
PRIDE:P94017 EnsemblPlants:AT1G14910.1 GeneID:838056
KEGG:ath:AT1G14910 TAIR:At1g14910 InParanoid:P94017 OMA:FMASDPF
PhylomeDB:P94017 Genevestigator:P94017 GermOnline:AT1G14910
Uniprot:P94017
Length = 692
Score = 223 (83.6 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 60/168 (35%), Positives = 83/168 (49%)
Query: 1 MGRLKQLRIFNGVLKD--KASLIKTTLSTKRQTSFIRRAILRATTHGSSSPPSINRIDAV 58
MG L+ R G LKD K L++ S + AI++AT H PP + +
Sbjct: 1 MGTLQSWRRAYGALKDTTKVGLVRVN-SDYAELDV---AIVKATNH-VECPPKDRHLRKI 55
Query: 59 ISSGNGSRPRA--CACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPT 116
+ + RPRA CI AL RLH TR+ VALK L IH ++ +++L F
Sbjct: 56 FLATSAIRPRADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQ 115
Query: 117 LGGRNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGYHL 164
G + +S F DDS P +W+ S W+R YA LE+ L RVL Y +
Sbjct: 116 KG--RIMQISNFKDDSSPVAWDCSGWVRTYALFLEERLECFRVLKYDI 161
>TAIR|locus:2165615 [details] [associations]
symbol:AT5G57200 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0030118 "clathrin coat" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IEA] [GO:0048268 "clathrin
coat assembly" evidence=IEA] InterPro:IPR011417 InterPro:IPR014712
Pfam:PF07651 GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005545 GO:GO:0006897 GO:GO:0005905 GO:GO:0030136
GO:GO:0030118 GO:GO:0048268 Gene3D:1.20.58.150 Gene3D:1.25.40.90
InterPro:IPR008942 InterPro:IPR013809 SMART:SM00273 SUPFAM:SSF48464
PROSITE:PS50942 eggNOG:NOG267212 EMBL:AB019233 HOGENOM:HOG000238535
ProtClustDB:CLSN2716413 IPI:IPI00527914 RefSeq:NP_200530.1
UniGene:At.55600 ProteinModelPortal:Q9LVD8 PaxDb:Q9LVD8
PRIDE:Q9LVD8 EnsemblPlants:AT5G57200.1 GeneID:835826
KEGG:ath:AT5G57200 TAIR:At5g57200 InParanoid:Q9LVD8 OMA:CKQLELA
PhylomeDB:Q9LVD8 Genevestigator:Q9LVD8 GermOnline:AT5G57200
Uniprot:Q9LVD8
Length = 591
Score = 220 (82.5 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 76/278 (27%), Positives = 127/278 (45%)
Query: 1 MGRLKQLRIFNGVLKDKASLIKTTLSTKRQTSFIRRAILRATTHGSSSPPSINRIDAVIS 60
MG R G LKD ++ ++++ + I AI++AT H SPP + + S
Sbjct: 1 MGTFTSFRKAYGALKDTTTVGLAKVNSEFKDLDI--AIVKATNH-VESPPKERHVRKIFS 57
Query: 61 SGNGSRPRA--CACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLG 118
+ + +PRA CI AL RL TR+ VA+K L IH + + +++L +
Sbjct: 58 ATSVIQPRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHR- 116
Query: 119 GRNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGYHLXXXXX-XXXXXXXX 177
R+ L +S F DD+ P +W+ SAW+R YA LE+ L RVL Y +
Sbjct: 117 -RHILRISNFKDDTSPLAWDCSAWVRTYALFLEERLECYRVLKYDIEAERLPKASGAASK 175
Query: 178 XXIFALLSS-DLLIEIDALVGFVQEISNVPNSLHLQRNNLV-YEIVRLVSEDYRLIQREI 235
+LS DLL ++ AL + + N L+ Y + ++ E ++ I I
Sbjct: 176 THRTRMLSGEDLLEQLPALQQLLYRLIGCQPEGAAYSNYLIQYALALVLKESFK-IYCAI 234
Query: 236 SLRVVELDERMTSLS----VDQLTLFMSALKKFEDCKE 269
+ ++ L + +S V L ++ A ++ E+ E
Sbjct: 235 NDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLAE 272
>TAIR|locus:2182432 [details] [associations]
symbol:AT5G35200 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0030118
"clathrin coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=IEA] [GO:0048268 "clathrin coat assembly" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR011417
InterPro:IPR014712 Pfam:PF07651 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005545 GO:GO:0006897
GO:GO:0005905 GO:GO:0030136 GO:GO:0030118 GO:GO:0048268
Gene3D:1.20.58.150 Gene3D:1.25.40.90 InterPro:IPR008942
InterPro:IPR013809 SMART:SM00273 SUPFAM:SSF48464 PROSITE:PS50942
eggNOG:NOG267212 EMBL:AP002031 EMBL:AF080121 EMBL:AY081284
EMBL:BT000375 IPI:IPI00518637 RefSeq:NP_198370.1 UniGene:At.30612
ProteinModelPortal:Q9LHS0 STRING:Q9LHS0 PaxDb:Q9LHS0 PRIDE:Q9LHS0
EnsemblPlants:AT5G35200.1 GeneID:833474 KEGG:ath:AT5G35200
TAIR:At5g35200 HOGENOM:HOG000238535 InParanoid:Q9LHS0 OMA:TFREELI
PhylomeDB:Q9LHS0 ProtClustDB:CLSN2686467 Genevestigator:Q9LHS0
GermOnline:AT5G35200 Uniprot:Q9LHS0
Length = 544
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 86/303 (28%), Positives = 139/303 (45%)
Query: 2 GRLKQLRIFNGVLKDKASLIKTTLSTKRQTSFIRRAILRATTHGSSSPPSINR-IDAVIS 60
G LR + G +KD ++ +++ + I AI++AT H PS R I A+
Sbjct: 6 GSQSSLRRYLGAIKDTTTVSLAKVNSDYKELDI--AIVKATNHVER--PSKERYIRAIFM 61
Query: 61 SGNGSRPRA--CACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLG 118
+ + +RPRA CI AL RL T + VALK L IH + + +++ + +
Sbjct: 62 AISATRPRADVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINY-SRS 120
Query: 119 GRNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGYHLXXXXXXXXXXXXXX 178
+ LN+S F DDS P +W SAW+R+YA LE+ L RVL Y +
Sbjct: 121 RSHMLNMSHFKDDSGPNAWAYSAWVRFYALFLEERLECFRVLKYDVEVDPPRTKD----- 175
Query: 179 XIFALLSSDLLIEIDALVGFVQEISNV-PNSLHLQRNNLVYEIVRLVSED---YRLIQRE 234
L + DLL ++ AL + + + P +Q + + + ++SE Y+ +
Sbjct: 176 ----LDTPDLLEQLPALQELLFRVLDCQPEGAAVQNHIIQLALSMVISESTKIYQALTDG 231
Query: 235 ISLRVVELDERMTSLSVDQLTLFMSALKKFEDCKERLSLLF-VNRKKNDGLWHLIGETKM 293
I V + + + +V L ++ A+K+ RLS F V + N G GE +
Sbjct: 232 IDNLVDKFFDMQRNDAVKALDMYRRAVKQ----AGRLSEFFEVCKSVNVGR----GERFI 283
Query: 294 KIE 296
KIE
Sbjct: 284 KIE 286
>TAIR|locus:2120780 [details] [associations]
symbol:AT4G25940 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0030118 "clathrin coat" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IEA] [GO:0048268 "clathrin
coat assembly" evidence=IEA] [GO:0006944 "cellular membrane fusion"
evidence=RCA] InterPro:IPR011417 InterPro:IPR014712 Pfam:PF07651
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564
GO:GO:0005545 GO:GO:0006897 GO:GO:0005905 GO:GO:0030136
EMBL:AL049483 GO:GO:0030118 GO:GO:0048268 Gene3D:1.20.58.150
Gene3D:1.25.40.90 InterPro:IPR008942 InterPro:IPR013809
SMART:SM00273 SUPFAM:SSF48464 PROSITE:PS50942 eggNOG:NOG267212
HOGENOM:HOG000238535 EMBL:AY070045 EMBL:AY096427 IPI:IPI00540467
PIR:T04249 RefSeq:NP_194324.2 UniGene:At.28423
ProteinModelPortal:Q8VYT2 PRIDE:Q8VYT2 EnsemblPlants:AT4G25940.1
GeneID:828700 KEGG:ath:AT4G25940 TAIR:At4g25940 InParanoid:Q8VYT2
OMA:CSAWIRT PhylomeDB:Q8VYT2 ProtClustDB:CLSN2716413
Genevestigator:Q8VYT2 GermOnline:AT4G25940 Uniprot:Q8VYT2
Length = 601
Score = 204 (76.9 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 54/166 (32%), Positives = 85/166 (51%)
Query: 1 MGRLKQLRIFNGVLKDKASLIKTTLSTKRQTSFIRRAILRATTHGSSSPPSINRIDAVIS 60
M R G +KD ++ ++++ + + AI++AT H S+P I + S
Sbjct: 1 MATFNSFRKAVGAIKDSTTVSIAKVNSEFKDLDV--AIVKATNHVESAPKE-RHIRRIFS 57
Query: 61 SGNGSRPRA--CACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLG 118
+ + +PRA CI AL RL TR+ VA+K L IH + + +++L + G
Sbjct: 58 ATSVVQPRADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRG 117
Query: 119 GRNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNLTVSRVLGYHL 164
+ L +S F DD+ P +W+ SAWIR YA LE+ L RVL Y +
Sbjct: 118 --HILRISNFKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKYDI 161
>TAIR|locus:505006543 [details] [associations]
symbol:AT4G32285 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0030118
"clathrin coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=IEA] [GO:0048268 "clathrin coat assembly" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA;IDA]
InterPro:IPR011417 InterPro:IPR014712 Pfam:PF07651 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005545 GO:GO:0006897 GO:GO:0005905
GO:GO:0030136 HOGENOM:HOG000238534 GO:GO:0030118 GO:GO:0048268
Gene3D:1.20.58.150 Gene3D:1.25.40.90 InterPro:IPR008942
InterPro:IPR013809 SMART:SM00273 SUPFAM:SSF48464 PROSITE:PS50942
EMBL:AL021811 EMBL:AL161580 EMBL:AY075654 EMBL:BT022005
EMBL:AK317226 IPI:IPI00536365 PIR:T48002 RefSeq:NP_001031770.1
RefSeq:NP_567892.1 UniGene:At.31676 ProteinModelPortal:Q8S9J8
SMR:Q8S9J8 PaxDb:Q8S9J8 PRIDE:Q8S9J8 ProMEX:Q8S9J8
EnsemblPlants:AT4G32285.1 EnsemblPlants:AT4G32285.2 GeneID:829362
KEGG:ath:AT4G32285 TAIR:At4g32285 eggNOG:NOG327279
InParanoid:Q8S9J8 OMA:RMILIAM PhylomeDB:Q8S9J8
ProtClustDB:CLSN2716947 Genevestigator:Q8S9J8 Uniprot:Q8S9J8
Length = 635
Score = 194 (73.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 45/146 (30%), Positives = 83/146 (56%)
Query: 12 GVLKDKASLIKTTLSTKRQTSFIRRAILRATTHGSSSPPSINRIDAVISSGNGSRPRACA 71
GV+KD+ S+ +++ + AI++AT+H S I ++S + SR A
Sbjct: 10 GVVKDQTSIGIAKVASNMAPD-LEVAIVKATSHDDDQS-SDKYIREILSLTSLSRGYVHA 67
Query: 72 CIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLGGRNFLNLSEFHDD 131
C+ ++ RL TRD VALK L +H ++ + + ++++ ++ T G LN+S+F D+
Sbjct: 68 CVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEI-LYATRRGTRILNMSDFRDE 126
Query: 132 SDPESWELSAWIRWYATVLEQNLTVS 157
+ SW+ SA++R YA+ L+Q L ++
Sbjct: 127 AHSSSWDHSAFVRTYASYLDQRLELA 152
>TAIR|locus:2040115 [details] [associations]
symbol:AT2G25430 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0030118
"clathrin coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=IEA] [GO:0048268 "clathrin coat assembly" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR011417 InterPro:IPR014712 Pfam:PF07651
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005545 GO:GO:0006897 GO:GO:0005905
GO:GO:0030136 HOGENOM:HOG000238534 GO:GO:0030118 GO:GO:0048268
Gene3D:1.20.58.150 Gene3D:1.25.40.90 InterPro:IPR008942
InterPro:IPR013809 SMART:SM00273 SUPFAM:SSF48464 PROSITE:PS50942
EMBL:AC006300 eggNOG:NOG327279 ProtClustDB:CLSN2716947
EMBL:AY139760 EMBL:BT008299 EMBL:AY085092 IPI:IPI00537001
PIR:C84648 RefSeq:NP_565595.1 UniGene:At.20747
ProteinModelPortal:Q8LF20 SMR:Q8LF20 PaxDb:Q8LF20 PRIDE:Q8LF20
EnsemblPlants:AT2G25430.1 GeneID:817081 KEGG:ath:AT2G25430
TAIR:At2g25430 InParanoid:Q8LF20 OMA:AFYNWCK PhylomeDB:Q8LF20
Genevestigator:Q8LF20 GermOnline:AT2G25430 Uniprot:Q8LF20
Length = 653
Score = 194 (73.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 45/146 (30%), Positives = 82/146 (56%)
Query: 12 GVLKDKASLIKTTLSTKRQTSFIRRAILRATTHGSSSPPSINRIDAVISSGNGSRPRACA 71
G +KD+ S+ +++ + AI++AT+H P S I +++ + SR A
Sbjct: 10 GAVKDQTSIGIAKVASNMAPD-LEVAIVKATSH-DDDPASEKYIREILNLTSLSRGYILA 67
Query: 72 CIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLGGRNFLNLSEFHDD 131
C+ ++ RL TRD VALK L +H ++ + I ++++ ++ T G LN+S+F D+
Sbjct: 68 CVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEI-LYSTRRGTRMLNMSDFRDE 126
Query: 132 SDPESWELSAWIRWYATVLEQNLTVS 157
+ SW+ SA++R YA L+Q L ++
Sbjct: 127 AHSSSWDHSAFVRTYAGYLDQRLELA 152
Score = 40 (19.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 229 RLIQREISLRVVELDERMTSLSVDQLTLFMSALKKFEDCKERLSLL 274
RL+ R +SLR L + + + + + K + D E L++L
Sbjct: 263 RLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYADICEVLAVL 308
>TAIR|locus:2132382 [details] [associations]
symbol:AT4G02650 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0030118 "clathrin coat" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IEA] [GO:0048268 "clathrin
coat assembly" evidence=IEA] InterPro:IPR011417 InterPro:IPR014712
Pfam:PF07651 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005545 GO:GO:0006897 GO:GO:0005905 GO:GO:0030136
HOGENOM:HOG000238534 GO:GO:0030118 GO:GO:0048268 Gene3D:1.20.58.150
Gene3D:1.25.40.90 InterPro:IPR008942 InterPro:IPR013809
SMART:SM00273 SUPFAM:SSF48464 PROSITE:PS50942 EMBL:AC002330
EMBL:AL161494 EMBL:AK118440 IPI:IPI00532997 PIR:T01084
RefSeq:NP_192174.2 UniGene:At.34282 ProteinModelPortal:Q8GX47
SMR:Q8GX47 PaxDb:Q8GX47 PRIDE:Q8GX47 EnsemblPlants:AT4G02650.1
GeneID:828212 KEGG:ath:AT4G02650 TAIR:At4g02650 eggNOG:NOG302020
InParanoid:Q8GX47 OMA:LLLDGMY PhylomeDB:Q8GX47
ProtClustDB:CLSN2679634 Genevestigator:Q8GX47 Uniprot:Q8GX47
Length = 611
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 49/155 (31%), Positives = 78/155 (50%)
Query: 1 MGRLKQLRIFNGVLKDKASLIKTTLSTKRQT-SFIRRAILRATTHGSSSPPSINRIDAVI 59
MG K R G +KD+ S+ + + + + + A+++AT H P I ++
Sbjct: 1 MGSSKLKRAI-GAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRH-DDYPAEDKYIREIL 58
Query: 60 SSGNGSRPRACACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLGG 119
+ SR AC+ L RL+ T++ VALK L I ++T D +Q F T G
Sbjct: 59 CLTSYSRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLT-DGDRAYEQEIFFATRRG 117
Query: 120 RNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNL 154
LN+S+F D S +SW+ SA++R YA L++ L
Sbjct: 118 TRLLNMSDFRDASQSDSWDYSAFVRTYALYLDERL 152
>TAIR|locus:2007524 [details] [associations]
symbol:AT1G03050 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0030118 "clathrin coat" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IEA] [GO:0048268 "clathrin
coat assembly" evidence=IEA] InterPro:IPR011417 InterPro:IPR014712
Pfam:PF07651 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0005545 GO:GO:0006897 GO:GO:0005905 GO:GO:0030136
HOGENOM:HOG000238534 GO:GO:0030118 GO:GO:0048268 Gene3D:1.20.58.150
Gene3D:1.25.40.90 InterPro:IPR008942 InterPro:IPR013809
SMART:SM00273 SUPFAM:SSF48464 PROSITE:PS50942 EMBL:AC006550
eggNOG:NOG302020 ProtClustDB:CLSN2679634 EMBL:DQ446223
IPI:IPI00525005 PIR:C86161 RefSeq:NP_171804.1 UniGene:At.42563
UniGene:At.51465 ProteinModelPortal:Q9SA65 SMR:Q9SA65 PaxDb:Q9SA65
PRIDE:Q9SA65 EnsemblPlants:AT1G03050.1 GeneID:839416
KEGG:ath:AT1G03050 TAIR:At1g03050 InParanoid:Q9SA65 OMA:LNMSDFC
PhylomeDB:Q9SA65 Genevestigator:Q9SA65 Uniprot:Q9SA65
Length = 599
Score = 164 (62.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 49/155 (31%), Positives = 78/155 (50%)
Query: 1 MGRLKQLRIFNGVLKDKASLIKTTLSTKRQT-SFIRRAILRATTHGSSSPPSINRIDAVI 59
MG K R G +KD+ S+ ++ + + S + AI++AT H P I ++
Sbjct: 1 MGSSKFKRAI-GAVKDQTSVGLAKVNGRSASLSELDVAIVKATRH-EEFPAEEKYIREIL 58
Query: 60 SSGNGSRPRACACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLGG 119
S + SR AC+ L RL+ T+ VALK L I ++ + + ++ F T G
Sbjct: 59 SLTSYSRSYINACVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEI-FFATRRG 117
Query: 120 RNFLNLSEFHDDSDPESWELSAWIRWYATVLEQNL 154
LN+S+F D S SW+ SA++R YA L++ L
Sbjct: 118 TRLLNMSDFRDVSRSNSWDYSAFVRTYALYLDERL 152
Score = 37 (18.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 290 ETKMKIETMMNKKAEEM 306
E + K E ++ KK EEM
Sbjct: 380 EEEAKEEVIIEKKQEEM 396
>TAIR|locus:2205558 [details] [associations]
symbol:AT1G05020 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0030118 "clathrin coat" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IEA] [GO:0048268 "clathrin
coat assembly" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR011417 InterPro:IPR014712 Pfam:PF07651
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0005545
GO:GO:0015031 GO:GO:0006897 GO:GO:0005905 GO:GO:0030136
EMBL:AC005322 EMBL:AK117462 EMBL:BT005184 IPI:IPI00537225
PIR:B86184 RefSeq:NP_563726.1 UniGene:At.42422
ProteinModelPortal:Q9ZVN6 SMR:Q9ZVN6 IntAct:Q9ZVN6 STRING:Q9ZVN6
EnsemblPlants:AT1G05020.1 GeneID:839343 KEGG:ath:AT1G05020
TAIR:At1g05020 eggNOG:NOG325565 HOGENOM:HOG000238534
InParanoid:Q9ZVN6 OMA:KSHEPAV PhylomeDB:Q9ZVN6
ProtClustDB:CLSN2687682 Genevestigator:Q9ZVN6 GermOnline:AT1G05020
GO:GO:0030118 GO:GO:0048268 Gene3D:1.20.58.150 Gene3D:1.25.40.90
InterPro:IPR008942 InterPro:IPR013809 SMART:SM00273 SUPFAM:SSF48464
PROSITE:PS50942 Uniprot:Q9ZVN6
Length = 653
Score = 145 (56.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 40/148 (27%), Positives = 70/148 (47%)
Query: 12 GVLKDKASLIKTTLSTKR----QTSFIRRAILRATTHGSSSPPSINRIDAVISSGNGSRP 67
G +KD+ S+ ++ + + AIL+AT+H P + ++ + +
Sbjct: 10 GAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEILGIISSKKS 69
Query: 68 RACACIQALMDRLHGTRDTFVALKCLYTIHNIITK-DSFILKDQLSIFPTLGGRNFLNLS 126
A +C A+ R+ TR+ VALK L + I D + ++ L G LNLS
Sbjct: 70 HAASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKR--GAKILNLS 127
Query: 127 EFHDDSDPESWELSAWIRWYATVLEQNL 154
F DDS+ W+ +A++R +A L++ L
Sbjct: 128 SFRDDSNSCPWDFTAFVRTFALYLDERL 155
Score = 44 (20.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 18/95 (18%), Positives = 43/95 (45%)
Query: 204 NVPNSLHLQRNNLVYEIVRLVSEDYRLIQREISLRVVELDERMTSLSV-DQLTLFMSALK 262
++PN+ + +NL+ +++ L ++ + + D + + + L L K
Sbjct: 427 SLPNNPSVSASNLILDLLSLDDVSNTAEAEDVEDKKKQDDSKAETFDPWEALMLRDDPKK 486
Query: 263 KFEDCKERLSLLFVNRKKNDGLWHL-IGETKMKIE 296
K E +E S + +++ G W L + ET +++
Sbjct: 487 KIETIEEEPSTA-EDHQRDSGNWLLALEETATQVQ 520
>TAIR|locus:2032995 [details] [associations]
symbol:AT1G25240 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0030118 "clathrin coat"
evidence=IEA] [GO:0030276 "clathrin binding" evidence=IEA]
[GO:0048268 "clathrin coat assembly" evidence=IEA]
InterPro:IPR011417 InterPro:IPR014712 Pfam:PF07651 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0005545 GO:GO:0006897
GO:GO:0005905 GO:GO:0030136 GO:GO:0030118 GO:GO:0048268
Gene3D:1.20.58.150 Gene3D:1.25.40.90 InterPro:IPR008942
InterPro:IPR013809 SUPFAM:SSF48464 PROSITE:PS50942 EMBL:AC079374
HOGENOM:HOG000242855 ProtClustDB:CLSN2682601 IPI:IPI00545736
PIR:A86382 RefSeq:NP_173895.1 UniGene:At.41370
ProteinModelPortal:Q9FRH3 EnsemblPlants:AT1G25240.1 GeneID:839107
KEGG:ath:AT1G25240 TAIR:At1g25240 eggNOG:NOG307322
InParanoid:Q9FRH3 OMA:GRTRCWA PhylomeDB:Q9FRH3
Genevestigator:Q9FRH3 GermOnline:AT1G25240 Uniprot:Q9FRH3
Length = 376
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 48/151 (31%), Positives = 76/151 (50%)
Query: 11 NGVLKDKASLIKTTLSTKRQTSF----IRRAILRATTHGSSSPPSIN--RIDAVISSGNG 64
+G LKD+ +L T+ R+TSF + AI+ AT+H SS N R+ I S
Sbjct: 8 SGALKDRKTLF--TIGFSRKTSFRNPDLDSAIIHATSHDDSSVDYHNAHRVYKWIRSSPA 65
Query: 65 S-RPRACACIQALMDRLHGTRDTFVALKCLYTIHNIITKDSFILKDQLSIFPTLGGRNFL 123
+ +P + AL R++ TR VALK L +H ++ L++ + P
Sbjct: 66 NLKP----LVHALSSRVNRTRSWIVALKALMLVHGVLCCKVTSLQE-IRRLP-------F 113
Query: 124 NLSEFHDD-SDP-ESWELSAWIRWYATVLEQ 152
+LS+F D S P ++W +A+IR Y + L+Q
Sbjct: 114 DLSDFSDGHSRPSKTWGFNAFIRAYFSFLDQ 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 332 0.00090 116 3 11 22 0.48 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 619 (66 KB)
Total size of DFA: 221 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.35u 0.14s 27.49t Elapsed: 00:00:02
Total cpu time: 27.35u 0.14s 27.49t Elapsed: 00:00:02
Start: Fri May 10 17:30:43 2013 End: Fri May 10 17:30:45 2013