BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019035
(347 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana
GN=At4g13590 PE=1 SV=2
Length = 359
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/343 (70%), Positives = 268/343 (78%), Gaps = 7/343 (2%)
Query: 10 VISRTKLPLLLAVDSLPSRASLLRRIPISPSLRCRELSRLNLSHGKFIVQASN-----IG 64
V S KLP L ++LP S R P LRCR +L+L GKF V+AS+
Sbjct: 19 VSSIQKLPFLSLSETLPCPKS--SRKPTFLPLRCRRRPKLDLLWGKFRVRASDAGVGSGS 76
Query: 65 VGSGGHEGSNESENQKISGNSSEIQKAPSRILYPVSIALVLLGCGLVFSLIAFVKGGPTL 124
G +GS S + SSE K Y +SIALVLL CGLVFSLI FVKGGP+
Sbjct: 77 YSGGEEDGSQSSSLDQSPATSSESLKPRGPFPYSLSIALVLLSCGLVFSLITFVKGGPSS 136
Query: 125 VLAAIAKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVI 184
VLAA+AKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEK LVLLGSM AL+LMT+LSVVI
Sbjct: 137 VLAAVAKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVI 196
Query: 185 GIIFHSVPSQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELAE 244
G IF SVP+QFQTTLPIGEYAA+ LLMFFGLKSIKDAWDLP E K+G++ G EL E +E
Sbjct: 197 GKIFQSVPAQFQTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSE 256
Query: 245 AEELVKEKLSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGH 304
AEELVKEK SK+L+NPLEI+WKSFSLVFFAEWGDRSMLAT+ALGAAQSP GVASGAIAGH
Sbjct: 257 AEELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGH 316
Query: 305 LLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFFGVF 347
L+AT A++GGAFLANYISEKLVGY+GG LFLVFA ATFFGVF
Sbjct: 317 LVATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAATFFGVF 359
>sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os11g0544500 PE=2 SV=1
Length = 347
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/323 (65%), Positives = 251/323 (77%), Gaps = 9/323 (2%)
Query: 31 LLRRIPISPSLRCRELSRLNLSHGKFIVQASNIGVGSGGHEGSN-----ESENQKISGNS 85
L RR + +RCR L L VQ SN+ VG+G +EG E + + +S
Sbjct: 28 LRRRCLVEGQVRCR-LPWLRPIRHNVRVQTSNVNVGAGSYEGGEAGSHGEHLDSSATRDS 86
Query: 86 SEIQKAPSRILYPVSIALVLLGCGLVFSLIAFVKGGPTLVLAAIAKSGFTAAFSLIFVSE 145
++ K PS YP SIA VLL C L + I F KG P+ V+A +AKSGFTAAF+LIFVSE
Sbjct: 87 NKPTKPPSGSRYPQSIAAVLLLCALASAFIVFFKGQPSAVVAMLAKSGFTAAFTLIFVSE 146
Query: 146 IGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPSQFQTTLPIGEYA 205
IGDKTFFIAALLAMQY++ LVLLGSMAAL+LMT++SV+IG IF SVP+QFQTTLPIGEYA
Sbjct: 147 IGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRIFQSVPAQFQTTLPIGEYA 206
Query: 206 AVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGR-ELDELAEAEELVKEKLSKRLSNPLEII 264
A+ LL FFG KSIKDAW LP +G+ G E ELAEAEELVKEK++K+L++PLE++
Sbjct: 207 AIALLAFFGFKSIKDAWQLPDN--ANGNLQGNSESGELAEAEELVKEKVAKKLTSPLEVL 264
Query: 265 WKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLLATSFAVLGGAFLANYISE 324
WKSFSLVFFAEWGDRSMLATIALGAAQSP+GVASGAIAGHL+AT A++GGAFLANY+SE
Sbjct: 265 WKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGAIAGHLVATFLAIVGGAFLANYLSE 324
Query: 325 KLVGYIGGVLFLVFAVATFFGVF 347
KLVG IGGVLFL+FAVATFFGVF
Sbjct: 325 KLVGLIGGVLFLLFAVATFFGVF 347
>sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana
GN=At1g64150 PE=2 SV=2
Length = 370
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 139/219 (63%), Gaps = 19/219 (8%)
Query: 132 SGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSV 191
SGF +AF LIF SE+GDKTFFIAALLA + V +G+ AL +MT++SVV+G FH V
Sbjct: 157 SGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYV 216
Query: 192 ----PSQFQ-TTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELAEAE 246
P +F T LPI + AAV LL++FG+ ++ DA S E K+ DE +
Sbjct: 217 DEVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAV---SDEGKA--------DEEQKEA 265
Query: 247 ELVKEKLSKR---LSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAG 303
EL +LS + I +F+LVF AEWGD+S +TIAL AA SP GV +GA+AG
Sbjct: 266 ELAVSELSGNGAGIVAAANTIISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAG 325
Query: 304 HLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVAT 342
H AT AVLGG+ L N++SEK + Y+GGVLFLVFA T
Sbjct: 326 HGAATLLAVLGGSLLGNFLSEKAIAYVGGVLFLVFAAVT 364
>sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0221700 PE=3 SV=2
Length = 341
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 139/223 (62%), Gaps = 24/223 (10%)
Query: 131 KSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHS 190
+GF +AF LIF SE+GD+TFFIAALLA + ++ LG+ ALA+MT++SVV+G FH
Sbjct: 125 STGFASAFLLIFFSELGDRTFFIAALLAARNSGAIIFLGTFGALAVMTIISVVLGRAFHY 184
Query: 191 V----PSQFQ-TTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELAEA 245
V P F T P+ ++ A LL+++G+ ++ DA SGD+ ++ E
Sbjct: 185 VDGIIPFSFGGTDFPVDDFLAACLLVYYGITTLLDA--------ASGDEE-----KMNEE 231
Query: 246 EELVKEKLSKRLSNPLEII------WKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASG 299
+E + +SK L N II +F LVF AEWGD+S +TIAL AA SP GV +G
Sbjct: 232 QEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKSFFSTIALAAASSPLGVIAG 291
Query: 300 AIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVAT 342
++AGH +AT AVLGG+ L ++SEK+V YIGG LFL FA T
Sbjct: 292 SLAGHAVATLIAVLGGSLLGTFLSEKIVAYIGGSLFLAFAAVT 334
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 130 AKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFH 189
A S + F L+F++E GDK+FF LA + V+ GS+A A+ T+++V+ G +
Sbjct: 252 AASTIASTFVLVFIAEWGDKSFFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLG 311
Query: 190 SVPSQFQTTLPIG-----EYAAVTLL 210
+ S+ + IG +AAVTL+
Sbjct: 312 TFLSE-KIVAYIGGSLFLAFAAVTLV 336
>sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica
GN=OsI_00941 PE=3 SV=2
Length = 341
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 139/223 (62%), Gaps = 24/223 (10%)
Query: 131 KSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHS 190
+GF +AF LIF SE+GD+TFFIAALLA + ++ LG+ ALA+MT++SVV+G FH
Sbjct: 125 STGFASAFLLIFFSELGDRTFFIAALLAARNSGAIIFLGTFGALAVMTIISVVLGRAFHY 184
Query: 191 V----PSQFQ-TTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELAEA 245
V P F T P+ ++ A LL+++G+ ++ DA SGD+ ++ E
Sbjct: 185 VDGIIPFSFGGTDFPVDDFLAACLLVYYGVTTLLDA--------ASGDEE-----KMNEE 231
Query: 246 EELVKEKLSKRLSNPLEII------WKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASG 299
+E + +SK L N II +F LVF AEWGD+S +TIAL AA SP GV +G
Sbjct: 232 QEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKSFFSTIALAAASSPLGVIAG 291
Query: 300 AIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVAT 342
++AGH +AT AVLGG+ L ++SEK+V YIGG LFL FA T
Sbjct: 292 SLAGHAVATLIAVLGGSLLGTFLSEKIVAYIGGSLFLAFAAVT 334
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 130 AKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFH 189
A S + F L+F++E GDK+FF LA + V+ GS+A A+ T+++V+ G +
Sbjct: 252 AASTIASTFVLVFIAEWGDKSFFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLG 311
Query: 190 SVPSQFQTTLPIG-----EYAAVTLL 210
+ S+ + IG +AAVTL+
Sbjct: 312 TFLSE-KIVAYIGGSLFLAFAAVTLV 336
>sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0615 PE=3 SV=1
Length = 206
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 137/215 (63%), Gaps = 17/215 (7%)
Query: 132 SGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSV 191
+ FTA LI VSE+GDKTFFIA +LAM+Y + VL+G + LA MT+LSV++G IF +
Sbjct: 3 TAFTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFL 62
Query: 192 PSQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELAEAEELVK- 250
P+++ YA V L + FG K + DA + +K+ L+E+ +AE+ +
Sbjct: 63 PTRYI------NYAEVALFLIFGTKLLWDA-----RRIKATAN----LEEMEDAEKAIAS 107
Query: 251 -EKLSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLLATS 309
EK K + I+ +SF+L F AEWGDR+ +ATIAL A+ + WGV++GAI GH +
Sbjct: 108 GEKKLKIVPRGWGIVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAV 167
Query: 310 FAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
AV+GG F+A ISEK V IGG+LF +FAV +++
Sbjct: 168 IAVMGGKFVAGRISEKTVTLIGGLLFYLFAVVSWW 202
>sp|Q6ZIB9|GDT14_ORYSJ GDT1-like protein 4 OS=Oryza sativa subsp. japonica GN=Os08g0528500
PE=2 SV=1
Length = 282
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 128/211 (60%), Gaps = 7/211 (3%)
Query: 134 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPS 193
F A+ S+I VSEIGD+TF IAAL+AM++ K VL G+++AL +MT+LS +G I ++ S
Sbjct: 75 FFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGLGRIVPNLIS 134
Query: 194 QFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELAEAEELVKEKL 253
+ T AA L FFGL+ + AW SK + + E A + ++
Sbjct: 135 RKHT-----NSAATVLYAFFGLRLLYIAWRSDSKASQKKEIEEVEEKLEAGQGKSTFRRI 189
Query: 254 SKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLLATSFAVL 313
R P I +SF L F AEWGDRS +ATIAL ++ GVA GA GH + TSFAV+
Sbjct: 190 FSRFCTP--IFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHTICTSFAVV 247
Query: 314 GGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
GG+ LA+ IS+ V IGG+LFL F+++++F
Sbjct: 248 GGSMLASKISQGTVATIGGLLFLGFSLSSYF 278
>sp|A2YXC7|GDT14_ORYSI GDT1-like protein 4 OS=Oryza sativa subsp. indica GN=OsI_29993 PE=3
SV=1
Length = 281
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 128/211 (60%), Gaps = 7/211 (3%)
Query: 134 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPS 193
F A+ S+I VSEIGD+TF IAAL+AM++ K VL G+++AL +MT+LS +G I ++ S
Sbjct: 74 FFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGLGRIVPNLIS 133
Query: 194 QFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELAEAEELVKEKL 253
+ T AA L FFGL+ + AW SK + + E A + ++
Sbjct: 134 RKHT-----NSAATVLYAFFGLRLLYIAWRSDSKASQKKEIEEVEEKLEAGQGKSTFRRI 188
Query: 254 SKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLLATSFAVL 313
R P I +SF L F AEWGDRS +ATIAL ++ GVA GA GH + TSFAV+
Sbjct: 189 FSRFCTP--IFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHTICTSFAVV 246
Query: 314 GGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
GG+ LA+ IS+ V IGG+LFL F+++++F
Sbjct: 247 GGSMLASKISQGTVATIGGLLFLGFSLSSYF 277
>sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1
Length = 324
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 129/233 (55%), Gaps = 34/233 (14%)
Query: 134 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPS 193
F AA S+I VSE+GDKTFFIAA++AM+Y ++ VL G+M AL LMT LSV+ G +P
Sbjct: 97 FVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPR 156
Query: 194 QFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDEL-AEAEELVKE- 251
+ Y + L FG++ +++ + S D+ EL+E+ AE ++ +E
Sbjct: 157 VYTY------YVSTVLFAIFGIRMLREGLKM------SPDEGQEELEEVQAELKKKDEEF 204
Query: 252 KLSKRLSNPLEI-----------IW---------KSFSLVFFAEWGDRSMLATIALGAAQ 291
+ +K L+ P ++ W ++ +L F AEWGDRS L TI L A +
Sbjct: 205 QRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAARE 264
Query: 292 SPWGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
P+GVA G GH L T AV+GG +A IS + V IGG++FL FA + F
Sbjct: 265 DPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALF 317
>sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1
Length = 293
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 136/230 (59%), Gaps = 15/230 (6%)
Query: 121 GPTLVLAAIAKSGFTA---AFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALM 177
G L L A A S F A +FS+I V+EIGD+TF IAAL+AM++ K VL G+++AL +M
Sbjct: 69 GLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVM 128
Query: 178 TVLSVVIGIIFHSVPSQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGR 237
T+LS +G I ++ S+ T AA L FFGL+ + AW S + KS K
Sbjct: 129 TILSTGLGRIVPNLISRKHT-----NSAATVLYAFFGLRLLYIAWR--STDSKSNQKKEM 181
Query: 238 ELDELAEAEELVK---EKLSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPW 294
E E K +L R P I +SF L F AEWGDRS +ATIAL ++
Sbjct: 182 EEVEEKLESGQGKTPFRRLFSRFCTP--IFLESFILTFLAEWGDRSQIATIALATHKNAI 239
Query: 295 GVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
GVA GA GH + TS AV+GG+ LA+ IS++ V +GG+LFL F+V+++F
Sbjct: 240 GVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYF 289
>sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500
PE=2 SV=1
Length = 279
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 116 AFVKGGPTLVLAAIAKSGFTAAF---SLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMA 172
A V+G + L + F A F S+I VSEIGD+TF IAAL+AM++ K +VL G+++
Sbjct: 51 AVVEGDHGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALS 110
Query: 173 ALALMTVLSVVIGIIFHSVPSQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSG 232
AL +MTVLS +G I ++ S+ T AA L +FFGL+ + AW K +
Sbjct: 111 ALYVMTVLSTGLGRIVPNLISRKHT-----NSAATVLYLFFGLRLLYIAWKSDPKGSQKK 165
Query: 233 DKNGRELDELAEAEELVKEKLSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQS 292
+ E + + + R P I ++F L F AEWGDRS +ATIAL ++
Sbjct: 166 EMEEVEEKLESGQGKSTLRRFFGRFCTP--IFLEAFILTFLAEWGDRSQIATIALATHKN 223
Query: 293 PWGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
GVA GA GH + TS AV+GG+ LA+ IS++ V IGGVLFL F+V+++F
Sbjct: 224 AIGVAVGASLGHTVCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYF 275
>sp|A2ZE50|GDT13_ORYSI GDT1-like protein 3 OS=Oryza sativa subsp. indica GN=OsI_36063 PE=3
SV=1
Length = 279
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 116 AFVKGGPTLVLAAIAKSGFTAAF---SLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMA 172
A V+G + L + F A F S+I VSEIGD+TF IAAL+AM++ K +VL G+++
Sbjct: 51 AVVEGDHGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALS 110
Query: 173 ALALMTVLSVVIGIIFHSVPSQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSG 232
AL +MTVLS +G I ++ S+ T AA L +FFGL+ + AW K +
Sbjct: 111 ALYVMTVLSTGLGRIVPNLISRKHT-----NSAATVLYLFFGLRLLYIAWKSDPKGSQKK 165
Query: 233 DKNGRELDELAEAEELVKEKLSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQS 292
+ E + + + R P I ++F L F AEWGDRS +ATIAL ++
Sbjct: 166 EMEEVEEKLESGQGKSTLRRFFGRFCTP--IFLEAFILTFLAEWGDRSQIATIALATHKN 223
Query: 293 PWGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
GVA GA GH + TS AV+GG+ LA+ IS++ V IGGVLFL F+V+++F
Sbjct: 224 AIGVAVGASLGHTVCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYF 275
>sp|Q9C6M1|GDT14_ARATH GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1
Length = 230
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 132/228 (57%), Gaps = 27/228 (11%)
Query: 133 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVP 192
GFT + ++ FVSEIGDKTFF AA+LAM+Y + LVL G ++AL +MT+LS +G ++
Sbjct: 7 GFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAPNLI 66
Query: 193 SQFQTTLPIGEYAAVTLLMF-FGLKSIKDAWDLPSKEVKSGDK---------------NG 236
S+ T + TLL F FGL S+ D + KE G + NG
Sbjct: 67 SRKWT------HHITTLLFFGFGLWSLWDGF----KEGGGGSEELAEVEAELDADLKANG 116
Query: 237 RELDELAEAEELVKEKLSKRLSNPLE-IIWKSFSLVFFAEWGDRSMLATIALGAAQSPWG 295
+ + ++ E+ K++ L+ I K+FS+ FF EWGD+S LATI L A ++P+G
Sbjct: 117 KSPKDSSKREDENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFG 176
Query: 296 VASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATF 343
V G + L T+ AV+GG LA+ ISE++V GG+LF++F + ++
Sbjct: 177 VVLGGVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSY 224
>sp|Q9SX28|GDT15_ARATH GDT1-like protein 5 OS=Arabidopsis thaliana GN=At1g68650 PE=2 SV=1
Length = 228
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 125/227 (55%), Gaps = 29/227 (12%)
Query: 133 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVP 192
GFT + ++ F+SEIGDKTFF AA+LAM+Y + LVL G ++AL +MT+LS +G ++
Sbjct: 7 GFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAPNLI 66
Query: 193 SQFQTTLPIGEYAAVTLLMF-FGLKSIKDAW----------------DLPSKEVKSGDKN 235
S+ T + T L F FGL S+ D + D K+ KN
Sbjct: 67 SRKWT------HHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDSDLKKTNDQSKN 120
Query: 236 GRELDELAEAEELVKEKLSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPWG 295
+ DE ++ K +P I K+FS+ FF EWGD+S LATI L A ++P G
Sbjct: 121 SKIEDE----QKKQKRPFLTAFFSP--IFLKAFSINFFGEWGDKSQLATIGLAADENPLG 174
Query: 296 VASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVAT 342
V G I L T+ AVLGG LA+ ISE++V GG+LF++F + +
Sbjct: 175 VVLGGIVAQTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQS 221
>sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2
Length = 323
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 124/232 (53%), Gaps = 33/232 (14%)
Query: 134 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPS 193
F AA S+I VSE+GDKTFFIAA++AM+Y ++ VL G+M ALALMT LSV+ G +P
Sbjct: 97 FVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGYATTVIPR 156
Query: 194 QFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELA-----EAEEL 248
+ Y + L FG++ +++ + S D+ EL+E+ + EE
Sbjct: 157 VYTY------YVSTALFAIFGIRMLREGLKM------SPDEGQEELEEVQAELKKKDEEF 204
Query: 249 VKEKL----------------SKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQS 292
+ KL K L I ++ +L F AEWGDRS L TI L A +
Sbjct: 205 QRTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAARED 264
Query: 293 PWGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
P+GVA G GH L T AV+GG +A IS + V IGG++FL FA + F
Sbjct: 265 PYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALF 316
>sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1
Length = 323
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 124/232 (53%), Gaps = 33/232 (14%)
Query: 134 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPS 193
F AA S+I VSE+GDKTFFIAA++AM+Y ++ VL G+M ALALMT LSV+ G +P
Sbjct: 97 FVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGYATTVIPR 156
Query: 194 QFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKNGRELDELA-----EAEEL 248
+ Y + L FG++ +++ + S D+ EL+E+ + EE
Sbjct: 157 VYTY------YVSTALFAIFGIRMLREGLKM------SPDEGQEELEEVQAELKKKDEEF 204
Query: 249 VKEKL----------------SKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQS 292
+ KL K L I ++ +L F AEWGDRS L TI L A +
Sbjct: 205 QRTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAARED 264
Query: 293 PWGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
P+GVA G GH L T AV+GG +A IS + V IGG++FL FA + F
Sbjct: 265 PYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALF 316
>sp|B9G125|GDT15_ORYSJ GDT1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os08g0433100
PE=2 SV=1
Length = 232
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 129/230 (56%), Gaps = 32/230 (13%)
Query: 133 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVP 192
GFT + ++ +SEIGDKTFF AA+LAM+Y + LVL G + +L +MT LSV +G + ++
Sbjct: 8 GFTKSLAMTVLSEIGDKTFFAAAILAMRYPRKLVLAGCLTSLTVMTALSVSLGWVAPNLI 67
Query: 193 SQFQTTLPIGEYAAVTLLMF-FGLKSIKDAW------------------DLPSKEVKSGD 233
S+ T + TLL F FG+ S+ + + + S + +S
Sbjct: 68 SRKWT------HHVTTLLFFVFGILSLWEGFKEDGDSEELAEVEAELDANFKSNKAESKS 121
Query: 234 KNGRELDELAEAEELVKEKLSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALGAAQSP 293
K+ D+ + V + S P+ I K+FS+ FF EWGD+S +ATI L A ++P
Sbjct: 122 KSKANDDKKKQQRPFVLQFFS-----PIFI--KAFSITFFGEWGDKSQIATIGLAADENP 174
Query: 294 WGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATF 343
+GV G + L T+ AV+GG LA+ ISEK+VG GVLFL+F + ++
Sbjct: 175 FGVVLGGVLAQALCTTAAVMGGKSLASQISEKMVGLSSGVLFLLFGIMSY 224
>sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1
Length = 287
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 128/239 (53%), Gaps = 37/239 (15%)
Query: 139 SLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPSQFQTT 198
S+IF EIGDKTF +AALLA + ++ V GS +AL +MT+L V++G H+ P F
Sbjct: 55 SMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLG---HAAPLLFPRK 111
Query: 199 LPIGEYAAVTLLMFFGLKSIKDAWD-LPSKEVKSGD-KNGRE-------LDELAE----- 244
L + L + FG+K + +A + + SKE S + +N R +D+L E
Sbjct: 112 LT--DILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIAANGPIDQLLEEGAAP 169
Query: 245 ----------AEELVKEKLSK------RLSNPLEIIWKSFSLVFFAEWGDRSMLATIALG 288
L+ + SK L +PL I K+F+L F +EWGDRS +ATIA+
Sbjct: 170 SHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFI--KAFALTFVSEWGDRSQIATIAMA 227
Query: 289 AAQSPWGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFFGVF 347
A+ + +GV GA GH T+ AV+ G +++ I V +IGG+LF+ F + F+ F
Sbjct: 228 ASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGLVYFYQGF 286
>sp|P38301|GDT1_YEAST GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1
Length = 280
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 31/240 (12%)
Query: 134 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPS 193
F + S+I +SEIGDKTF IAAL+AM++++VLV + +LA+MT+LS V+G HS +
Sbjct: 42 FLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVG---HSAVA 98
Query: 194 QFQTTLPIGEYAAVTLLMF------FGLKSIKDA-----WDLPSKEVKSGDKNGRELDEL 242
F + +A + L+F GL+ KDA +E+ D N +++D++
Sbjct: 99 -FLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEEEMAEVEEEIAIKDMN-QDMDDV 156
Query: 243 AEAEELVKEKLSKRLSNPLEII--------------W-KSFSLVFFAEWGDRSMLATIAL 287
+ + +K K S +I+ W + F +VF E GDRS ++ IA+
Sbjct: 157 EKGGDTAYDKQLKNASIGKKIVHRIRELASFMFSPVWVQIFLMVFLGELGDRSQISIIAM 216
Query: 288 GAAQSPWGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFFGVF 347
W V +GA+ GH + + AV+GG LA IS + + +LF +FA+ + F
Sbjct: 217 ATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFALMYIYQAF 276
>sp|Q9P7Q0|YLY5_SCHPO GDT1-like protein C186.05c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC186.05c PE=3 SV=1
Length = 262
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 118/238 (49%), Gaps = 42/238 (17%)
Query: 139 SLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMAALALMTVLSVVIGIIFHSVPSQFQTT 198
S+I E+GDK+F + ALLA QY + V GS AL MT +V++G + P F +
Sbjct: 32 SMIIGCELGDKSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVG---RAAPFLFPKS 88
Query: 199 LPIGEYAAVTLLMFFGLKSIKDAWDLPSKEVKSGDKN-GRELDELAE---AEELVKEKL- 253
I TL + FG+K +K+ SKEV+ ++ E D++ + EE +K+ L
Sbjct: 89 --ITHILGGTLFLIFGVKMLKE-----SKEVRESQQSLENEFDKVEKIIVNEEDMKKTLE 141
Query: 254 -----SKRLSNPLEIIW----------------------KSFSLVFFAEWGDRSMLATIA 286
S R S+ L+ + K+F+L+F +E GDRS +ATI
Sbjct: 142 LGLPASNRSSSTLKDKFFKVFSMSCFKNLFSKKFSRAFIKAFALIFVSELGDRSQIATIV 201
Query: 287 LGAAQSPWGVASGAIAGHLLATSFAVLGGAFLANYISEKLVGYIGGVLFLVFAVATFF 344
+ A + V G GH+L T AV+ G +++N I V + GG++F++F + F
Sbjct: 202 MSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMIFGILYIF 259
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 134 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKVL-VLLGSMAALALMTVLSVVIG 185
F AF+LIFVSE+GD++ IA ++ EKVL V +G L T+++V++G
Sbjct: 179 FIKAFALIFVSELGDRS-QIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVG 230
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%)
Query: 264 IWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLLATSFAVLGGAFLANYIS 323
I S S++ E GD+S + T L V G+ TSFAVL G
Sbjct: 27 IGMSISMIIGCELGDKSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVGRAAPFLFP 86
Query: 324 EKLVGYIGGVLFLVFAV 340
+ + +GG LFL+F V
Sbjct: 87 KSITHILGGTLFLIFGV 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,887,688
Number of Sequences: 539616
Number of extensions: 4716206
Number of successful extensions: 16135
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 16058
Number of HSP's gapped (non-prelim): 40
length of query: 347
length of database: 191,569,459
effective HSP length: 118
effective length of query: 229
effective length of database: 127,894,771
effective search space: 29287902559
effective search space used: 29287902559
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)