Query 019039
Match_columns 347
No_of_seqs 152 out of 1296
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:56:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 3.3E-74 1.1E-78 549.2 28.6 336 2-347 21-468 (498)
2 3dwl_A Actin-related protein 3 100.0 8.7E-75 3E-79 548.5 23.1 343 1-347 1-393 (427)
3 1k8k_B ARP2, actin-like protei 100.0 4.5E-70 1.5E-74 514.4 16.0 346 1-347 1-361 (394)
4 2fxu_A Alpha-actin-1, actin, a 100.0 9.1E-68 3.1E-72 496.2 29.1 342 3-347 4-346 (375)
5 4fo0_A Actin-related protein 8 100.0 2.2E-66 7.4E-71 514.8 21.5 343 4-347 15-561 (593)
6 1k8k_A ARP3, actin-like protei 100.0 7.9E-63 2.7E-67 469.4 29.0 344 1-347 1-384 (418)
7 4am6_A Actin-like protein ARP8 100.0 2.4E-52 8.3E-57 401.2 26.3 313 2-323 38-529 (655)
8 1jce_A ROD shape-determining p 100.0 4.7E-35 1.6E-39 271.2 22.3 307 1-346 1-321 (344)
9 2v7y_A Chaperone protein DNAK; 99.9 2.7E-24 9.4E-29 208.6 10.8 296 5-346 3-346 (509)
10 3h1q_A Ethanolamine utilizatio 99.9 1.4E-21 4.9E-26 174.6 20.5 241 5-346 29-270 (272)
11 1dkg_D Molecular chaperone DNA 99.9 6.6E-22 2.3E-26 185.4 15.7 234 81-346 114-377 (383)
12 3qfu_A 78 kDa glucose-regulate 99.9 2.4E-21 8.1E-26 182.3 12.7 210 100-346 152-388 (394)
13 3i33_A Heat shock-related 70 k 99.8 6.7E-20 2.3E-24 173.0 10.1 209 101-346 158-396 (404)
14 1yuw_A Heat shock cognate 71 k 99.7 7.7E-18 2.6E-22 164.7 14.2 191 101-319 139-355 (554)
15 2kho_A Heat shock protein 70; 99.7 1.7E-17 6E-22 163.7 15.8 191 101-319 135-358 (605)
16 2ych_A Competence protein PILM 99.7 1.4E-15 4.9E-20 142.0 17.6 168 122-320 157-332 (377)
17 3d2f_A Heat shock protein homo 99.7 5.1E-16 1.8E-20 154.6 14.6 190 102-319 139-359 (675)
18 4gni_A Putative heat shock pro 99.6 7.9E-16 2.7E-20 145.3 11.9 210 81-320 129-370 (409)
19 2fsj_A Hypothetical protein TA 99.6 2.2E-16 7.5E-21 145.6 7.3 179 6-197 23-240 (346)
20 4b9q_A Chaperone protein DNAK; 99.6 4.8E-15 1.6E-19 146.3 13.0 196 101-320 135-359 (605)
21 4a2a_A Cell division protein F 99.5 3.3E-13 1.1E-17 127.2 17.7 173 116-320 169-354 (419)
22 4apw_A ALP12; actin-like prote 99.2 9.3E-12 3.2E-16 113.8 7.6 186 1-196 4-219 (329)
23 3js6_A Uncharacterized PARM pr 99.2 3.7E-11 1.3E-15 110.8 10.5 191 1-197 1-232 (355)
24 2zgy_A Plasmid segregation pro 99.2 1.5E-10 5.3E-15 105.3 12.3 88 125-216 135-229 (320)
25 2d0o_A DIOL dehydratase-reacti 98.5 2.4E-07 8.2E-12 87.3 8.8 74 137-221 390-468 (610)
26 1nbw_A Glycerol dehydratase re 98.5 4.3E-07 1.5E-11 85.9 9.1 74 137-221 392-470 (607)
27 4ehu_A Activator of 2-hydroxyi 96.9 0.02 6.7E-07 50.2 14.1 64 132-195 73-141 (276)
28 1t6c_A Exopolyphosphatase; alp 96.1 0.014 4.9E-07 52.3 8.0 74 115-191 97-178 (315)
29 3mdq_A Exopolyphosphatase; str 95.4 0.017 5.7E-07 51.9 5.1 73 116-190 90-170 (315)
30 1u6z_A Exopolyphosphatase; alp 95.1 0.12 4.3E-06 49.4 10.6 73 115-190 96-176 (513)
31 3hi0_A Putative exopolyphospha 94.9 0.13 4.5E-06 49.2 10.3 72 115-189 100-178 (508)
32 1hux_A Activator of (R)-2-hydr 94.3 0.56 1.9E-05 40.7 12.1 26 295-320 209-234 (270)
33 2gup_A ROK family protein; sug 94.1 1.1 3.7E-05 39.1 13.7 53 119-174 86-143 (292)
34 3vgl_A Glucokinase; ROK family 92.9 1.7 5.7E-05 38.6 13.0 51 122-174 90-147 (321)
35 3djc_A Type III pantothenate k 92.9 0.63 2.2E-05 40.4 9.7 18 6-23 4-21 (266)
36 4db3_A Glcnac kinase, N-acetyl 92.9 2.3 7.7E-05 37.9 13.8 52 121-174 113-171 (327)
37 3cet_A Conserved archaeal prot 91.9 0.11 3.6E-06 46.5 3.5 25 149-173 127-151 (334)
38 2h3g_X Biosynthetic protein; p 91.3 0.61 2.1E-05 40.5 7.8 18 6-23 2-19 (268)
39 3vov_A Glucokinase, hexokinase 90.6 8.2 0.00028 33.7 14.9 51 122-174 92-149 (302)
40 3bex_A Type III pantothenate k 88.5 1.6 5.4E-05 37.4 8.0 18 6-23 5-22 (249)
41 1zc6_A Probable N-acetylglucos 88.4 4.6 0.00016 35.4 11.4 89 80-172 53-145 (305)
42 2ews_A Pantothenate kinase; PA 87.2 3.4 0.00012 36.1 9.5 47 295-346 237-284 (287)
43 3cer_A Possible exopolyphospha 86.6 0.73 2.5E-05 41.6 5.0 74 116-190 103-191 (343)
44 3r8e_A Hypothetical sugar kina 85.8 4.9 0.00017 35.5 10.1 49 124-174 113-169 (321)
45 2ch5_A NAGK protein; transfera 83.3 9.2 0.00031 33.9 10.8 90 80-171 49-143 (347)
46 2e2o_A Hexokinase; acetate and 81.8 10 0.00035 32.9 10.3 61 103-170 62-123 (299)
47 2i7n_A Pantothenate kinase 1; 81.6 6.4 0.00022 35.5 8.9 68 275-345 285-355 (360)
48 1zbs_A Hypothetical protein PG 81.5 11 0.00037 32.7 10.3 70 103-173 62-133 (291)
49 2qm1_A Glucokinase; alpha-beta 81.3 3.4 0.00011 36.5 7.0 49 124-174 104-159 (326)
50 2yhw_A Bifunctional UDP-N-acet 70.2 9.6 0.00033 33.9 6.9 47 126-174 129-182 (343)
51 3aap_A Ectonucleoside triphosp 67.5 3.8 0.00013 37.0 3.6 101 80-184 52-177 (353)
52 4htl_A Beta-glucoside kinase; 67.2 51 0.0017 28.4 10.8 50 123-174 92-148 (297)
53 2ap1_A Putative regulator prot 62.8 29 0.00098 30.4 8.5 49 124-174 116-171 (327)
54 2f9w_A Pantothenate kinase; CO 61.7 22 0.00075 30.6 7.2 17 6-22 25-41 (271)
55 1saz_A Probable butyrate kinas 60.3 39 0.0013 30.5 9.0 27 296-322 297-324 (381)
56 1z05_A Transcriptional regulat 59.2 22 0.00076 32.6 7.3 51 122-174 202-259 (429)
57 2hoe_A N-acetylglucosamine kin 57.7 42 0.0014 30.2 8.8 51 122-174 182-237 (380)
58 1zxo_A Conserved hypothetical 46.6 15 0.00051 31.8 3.7 55 119-173 75-131 (291)
59 3qbx_A Anhydro-N-acetylmuramic 45.0 6.6 0.00022 35.5 1.0 23 296-318 285-307 (371)
60 4e1j_A Glycerol kinase; struct 42.3 15 0.0005 35.0 3.1 24 1-24 23-46 (520)
61 3cqy_A Anhydro-N-acetylmuramic 36.4 12 0.00042 33.8 1.4 23 296-318 291-313 (370)
62 3mcp_A Glucokinase; structural 35.6 2.4E+02 0.0082 25.1 11.7 130 1-175 2-173 (366)
63 3eno_A Putative O-sialoglycopr 33.8 16 0.00053 32.6 1.7 26 295-320 250-275 (334)
64 3cj1_A Ectonucleoside triphosp 32.7 40 0.0014 31.4 4.3 22 149-170 190-211 (456)
65 2aa4_A Mannac kinase, putative 30.8 76 0.0026 26.9 5.7 51 121-174 89-146 (289)
66 2ivn_A O-sialoglycoprotein end 29.5 22 0.00076 31.4 2.0 26 295-320 245-270 (330)
67 3ll3_A Gluconate kinase; xylul 27.5 25 0.00084 33.2 2.0 36 129-164 230-267 (504)
68 1djx_A PLC-D1, phosphoinositid 27.3 36 0.0012 33.2 3.1 44 81-130 236-279 (624)
69 3h6e_A Carbohydrate kinase, FG 27.2 31 0.0011 32.4 2.6 21 4-24 6-26 (482)
70 3zx3_A Ectonucleoside triphosp 27.0 52 0.0018 30.6 4.0 89 81-170 89-202 (452)
71 3djc_A Type III pantothenate k 26.6 1.4E+02 0.0048 25.4 6.5 49 151-199 4-53 (266)
72 2zkm_X 1-phosphatidylinositol- 23.6 54 0.0018 33.0 3.7 44 81-130 386-430 (799)
73 3hz6_A Xylulokinase; xylulose, 23.5 44 0.0015 31.5 2.9 21 4-24 5-25 (511)
74 2uyt_A Rhamnulokinase; rhamnos 23.2 35 0.0012 31.9 2.1 22 1-22 1-22 (489)
75 4g9i_A Hydrogenase maturation 23.2 50 0.0017 33.1 3.3 27 295-321 706-732 (772)
76 3h3n_X Glycerol kinase; ATP-bi 21.5 52 0.0018 30.9 3.0 33 129-161 237-271 (506)
77 2zf5_O Glycerol kinase; hypert 21.1 55 0.0019 30.7 3.0 23 1-24 1-23 (497)
78 3ttc_A HYPF, transcriptional r 20.9 37 0.0013 33.2 1.8 24 296-319 601-624 (657)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-74 Score=549.23 Aligned_cols=336 Identities=27% Similarity=0.431 Sum_probs=299.0
Q ss_pred CCCCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhhhhhccCCceEeccc-cccccCCceeeccccCCeeecH
Q 019039 2 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAA-ALDLRHQLDVSYPVNNGIVQNW 80 (347)
Q Consensus 2 ~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~p~~~g~i~~~ 80 (347)
++.++||||+||.++||||+|++.|+.++||++++++... .+..++|++ +...++.+.+++|+++|.|.||
T Consensus 21 de~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~--------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dw 92 (498)
T 3qb0_A 21 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE--------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDW 92 (498)
T ss_dssp CCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS--------SCCEECCTTGGGSCCTTEEEEESEETTEESCH
T ss_pred CCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC--------CccEEEecHHHhcCcCceEEeccCcCCEEccH
Confidence 4668999999999999999999999999999999876431 347789986 5666788999999999999999
Q ss_pred HHHHHHHHHHcccccCCCCCCC-eEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCceEEEEecCCC
Q 019039 81 EDMGQVWDHAFFSELKIDPPEC-KILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDG 159 (347)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~~-~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~ 159 (347)
|.+|.+|+|+|.+.|++++.++ ||+++||+++++..|++++|++||.|++|+++++.+++||+|++|+++|+|||+|++
T Consensus 93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g 172 (498)
T 3qb0_A 93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD 172 (498)
T ss_dssp HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence 9999999999988899999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcC------------------CCCCCC------C-hHHHHHHHH
Q 019039 160 VTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRG------------------YSMNRT------A-DFETVRQIK 214 (347)
Q Consensus 160 ~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~------------------~~~~~~------~-~~~~~~~iK 214 (347)
.|+|+||++|+++++++.++++||+++|++|.++|+.++ +.++.. . +.++++++|
T Consensus 173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK 252 (498)
T 3qb0_A 173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252 (498)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998653 222211 1 355899999
Q ss_pred Hhccccccc--hHHHHhhcccCccceeeeeCCCCceEEeCCc-cccccccccCCCCCCC---------------------
Q 019039 215 EKLCYISYD--YKREYQLGLETTILVKNYTLPDGRVIKVGTE-RFQAPEALFTPELIDV--------------------- 270 (347)
Q Consensus 215 ~~~~~v~~~--~~~~~~~~~~~~~~~~~~~lpdg~~i~i~~~-~~~~~E~lF~p~~~~~--------------------- 270 (347)
|++|||+.+ +.++.. ...+...+.|+||||+.|.++.| ||.+||.||+|++++.
T Consensus 253 E~~c~Va~~~~~~~~~~--~~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~ 330 (498)
T 3qb0_A 253 ETLCHICPTKTLEETKT--ELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP 330 (498)
T ss_dssp HHTCCCCSSCHHHHHHH--HHHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred HhhEEecCCccHhHHhh--hccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence 999999987 444321 12345678999999999999999 9999999999986643
Q ss_pred -----------------------------------------------------------CCCCHHHHHHHHHHhCCHHHH
Q 019039 271 -----------------------------------------------------------EGDGMADMVFRCIQEMDIDNR 291 (347)
Q Consensus 271 -----------------------------------------------------------~~~~l~~~i~~~i~~~~~d~r 291 (347)
+..||++++.++|.+||+|+|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r 410 (498)
T 3qb0_A 331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR 410 (498)
T ss_dssp CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence 567899999999999999999
Q ss_pred HhhhcceEEecCCCCCCChHHHHHHHHhhcCCCCCeeeeec--CCccccccccccccC
Q 019039 292 MMLYQHIVLSGGSTMYPGLPSRYYVELFFASHDIPLCFLRN--LGLHVYSLFLSVFVL 347 (347)
Q Consensus 292 ~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~~~~~~~~~~~--~~~~~~s~w~G~~~~ 347 (347)
+.|++||||+||+|++|||.+||++||..+.|..++++... ..++.|++|+|||||
T Consensus 411 ~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsil 468 (498)
T 3qb0_A 411 ATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSIL 468 (498)
T ss_dssp HHHHTTEEEESGGGGSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHH
T ss_pred HHHhcCEEEeCCccCchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEE
Confidence 99999999999999999999999999999999777776543 378999999999975
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.7e-75 Score=548.47 Aligned_cols=343 Identities=36% Similarity=0.600 Sum_probs=288.7
Q ss_pred CC-CCCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchh--------------------hhhhhccCCceEecccc
Q 019039 1 MD-NRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYE--------------------ESLMEQELKDTIVGAAA 59 (347)
Q Consensus 1 ~~-~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~ 59 (347)
|. ..++||||+||.++|||||||+.|+++|||.+|+++.... ....+...+++++|+++
T Consensus 1 m~~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea 80 (427)
T 3dwl_A 1 MASFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDA 80 (427)
T ss_dssp --CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHH
T ss_pred CCCCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHH
Confidence 54 4679999999999999999999999999999999875410 00012334588999999
Q ss_pred ccccC-CceeeccccCCeeecHHHHHHHHHHHcccccCCCCCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehh
Q 019039 60 LDLRH-QLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQ 138 (347)
Q Consensus 60 ~~~~~-~~~~~~p~~~g~i~~~~~l~~~~~~~~~~~l~~~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~ 138 (347)
...+. .+.+++|+++|.|.|||.+|++|+|+|++.|+++++++|++++||+++++..|++++|++||+|++|+++++.+
T Consensus 81 ~~~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~ 160 (427)
T 3dwl_A 81 LKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQ 160 (427)
T ss_dssp HHTHHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEH
T ss_pred hhCcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecch
Confidence 87765 78899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhhhCC--------CceEEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCCCCChHHHH
Q 019039 139 AVLTLYAQG--------LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETV 210 (347)
Q Consensus 139 ~~~a~~~~g--------~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~ 210 (347)
++||+|++| .++|+|||+|++.|+|+||++|+++.++++++++||+++|++|.++|+.+++. ..+.+++
T Consensus 161 ~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~ 237 (427)
T 3dwl_A 161 AVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTA 237 (427)
T ss_dssp HHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHH
T ss_pred HHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHH
Confidence 999999998 68999999999999999999999999999999999999999999999988765 4567899
Q ss_pred HHHHHhccccccchHHHHhhcccCccceeeeeC--CCCc--eEEeCCccccccccccCCCCCCCC-CCCHHHHHHHHHHh
Q 019039 211 RQIKEKLCYISYDYKREYQLGLETTILVKNYTL--PDGR--VIKVGTERFQAPEALFTPELIDVE-GDGMADMVFRCIQE 285 (347)
Q Consensus 211 ~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~~~l--pdg~--~i~i~~~~~~~~E~lF~p~~~~~~-~~~l~~~i~~~i~~ 285 (347)
++||+++||++.|+.++.+.........+.|.+ |||+ .+.++.|||++||.||+|++++.+ ..+|+++|.++|++
T Consensus 238 ~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~ 317 (427)
T 3dwl_A 238 ERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQS 317 (427)
T ss_dssp HHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHT
T ss_pred HHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHh
Confidence 999999999999988776543332333567888 8997 788999999999999999999988 48999999999999
Q ss_pred CCHHHHHhhhcceEEecCCCCCCChHHHHHHHHhhcCC---------------CCCeeeeecCCccccccccccccC
Q 019039 286 MDIDNRMMLYQHIVLSGGSTMYPGLPSRYYVELFFASH---------------DIPLCFLRNLGLHVYSLFLSVFVL 347 (347)
Q Consensus 286 ~~~d~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~~---------------~~~~~~~~~~~~~~~s~w~G~~~~ 347 (347)
||+|+|+.|++|||||||+|++|||.+||++||+.+.| ..++++.. .+++.|++|+|||+|
T Consensus 318 c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~-~~~r~~s~WiGGSil 393 (427)
T 3dwl_A 318 SPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVIS-HKRQRNAVWFGGSLL 393 (427)
T ss_dssp SCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEEC-CTTCTTHHHHHHHHH
T ss_pred CCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEec-CCccccceecCceee
Confidence 99999999999999999999999999999999998863 34555443 568999999999975
No 3
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=4.5e-70 Score=514.45 Aligned_cols=346 Identities=60% Similarity=1.039 Sum_probs=162.5
Q ss_pred CCC--CCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhhhhhccCCceEeccccccccCCceeeccccCCeee
Q 019039 1 MDN--RNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQ 78 (347)
Q Consensus 1 ~~~--~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~ 78 (347)
||. .++||||+||.++|+||+|++.|+.++||++++++.......++...+++++|+++...++.+.+.+|+++|.|.
T Consensus 1 ~~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~ 80 (394)
T 1k8k_B 1 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVR 80 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEe
Confidence 653 378999999999999999999999999999998766431100011235789999998888888999999999999
Q ss_pred cHHHHHHHHHHHc-ccccCCCCCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCceEEEEecC
Q 019039 79 NWEDMGQVWDHAF-FSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSG 157 (347)
Q Consensus 79 ~~~~l~~~~~~~~-~~~l~~~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG 157 (347)
|||.++.+|+|+| ++.|+.+++++++++++|+++++..|+++++++||.|++++++++++++||+|++|.++|+|||+|
T Consensus 81 dwd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG 160 (394)
T 1k8k_B 81 NWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSG 160 (394)
T ss_dssp -------------------------------------------------------------------------CCEEEEC
T ss_pred cHHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcC
Confidence 9999999999999 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHhccccccchHHHHhhcccCccc
Q 019039 158 DGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTIL 237 (347)
Q Consensus 158 ~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~ 237 (347)
+++|+|+||++|+++.+++.++++||+++|++|.++|..+++.+....+.+.++++|+++|+++.++..+.+...+.+..
T Consensus 161 ~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~ 240 (394)
T 1k8k_B 161 DGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVL 240 (394)
T ss_dssp SSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTT
T ss_pred CCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcC
Confidence 99999999999999999999999999999999999999998887767789999999999999998887765543334555
Q ss_pred eeeeeCCCCceEEeCCccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCChHHHHHHH
Q 019039 238 VKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRYYVE 317 (347)
Q Consensus 238 ~~~~~lpdg~~i~i~~~~~~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~erl~~e 317 (347)
...|++|||+.+.++.+||.+||.||+|++++.+..+|+++|.++|.+||.|+|+.+++||+||||+|++|||.+||++|
T Consensus 241 ~~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~e 320 (394)
T 1k8k_B 241 VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 (394)
T ss_dssp CEEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHH
T ss_pred ceEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcC-----------CC-CCeeeeecCCccccccccccccC
Q 019039 318 LFFAS-----------HD-IPLCFLRNLGLHVYSLFLSVFVL 347 (347)
Q Consensus 318 L~~~~-----------~~-~~~~~~~~~~~~~~s~w~G~~~~ 347 (347)
|..+. |. .++++.. .+.+.|++|+||+++
T Consensus 321 l~~~~~~~~~~~~~~~p~~~~v~v~~-~~~~~~~~w~Ggsil 361 (394)
T 1k8k_B 321 LKQLYLERVLKGDVEKLSKFKIRIED-PPRRKHMVFLGGAVL 361 (394)
T ss_dssp HHHHHHHHTCSSCCCTTCCCCC--------------------
T ss_pred HHHHHhhhhcccccCCCCceEEEEec-CCCcceeEEhhhHHh
Confidence 99876 54 3555432 356889999999985
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=9.1e-68 Score=496.17 Aligned_cols=342 Identities=44% Similarity=0.836 Sum_probs=307.1
Q ss_pred CCCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhhhhhccCCceEeccccccccCCceeeccccCCeeecHHH
Q 019039 3 NRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWED 82 (347)
Q Consensus 3 ~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~~~ 82 (347)
+.++||||+||+++|+||+|++.|+.++||++++++.+.... +...+++++|+++...++.+.+.+|+++|.+.||+.
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~--~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 81 (375)
T ss_dssp CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC---------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred CCceEEEECCCCeEEEEECCCCCCceeecccccccccccccc--CCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence 567999999999999999999999999999999877643211 222357899999988888889999999999999999
Q ss_pred HHHHHHHHcccccCCCCCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCceEEEEecCCCceE
Q 019039 83 MGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTH 162 (347)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t~ 162 (347)
++.+|+|+|++.|+.+++++++++++|++++...|+++++++||.+++++++++++|+||+|++|..+++|||+|+++|+
T Consensus 82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~ 161 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 161 (375)
T ss_dssp HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHhccccccchHHHHhhcccCccceeeee
Q 019039 163 VVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYT 242 (347)
Q Consensus 163 v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 242 (347)
|+||++|+++.++..++++||+++|++|.++|..+++.+....+.+.++++|+++|+++.++..+.+.....+.....|.
T Consensus 162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~ 241 (375)
T 2fxu_A 162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 241 (375)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence 99999999999998999999999999999999998877665567889999999999999888777554433445567899
Q ss_pred CCCCceEEeCCccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCChHHHHHHHHhhcC
Q 019039 243 LPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRYYVELFFAS 322 (347)
Q Consensus 243 lpdg~~i~i~~~~~~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~ 322 (347)
+|||+.+.++.+||.+||.||+|.+++.+..+|+++|.+++.+||.|+|+.+++||+||||+|++|||.+||++||..+.
T Consensus 242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~ 321 (375)
T 2fxu_A 242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA 321 (375)
T ss_dssp CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC-CCeeeeecCCccccccccccccC
Q 019039 323 HD-IPLCFLRNLGLHVYSLFLSVFVL 347 (347)
Q Consensus 323 ~~-~~~~~~~~~~~~~~s~w~G~~~~ 347 (347)
|. .++++. ....+.+++|+||+++
T Consensus 322 p~~~~v~v~-~~~~p~~~~w~G~si~ 346 (375)
T 2fxu_A 322 PSTMKIKII-APPERKYSVWIGGSIL 346 (375)
T ss_dssp CTTCCCCEE-CCTTTTSHHHHHHHHH
T ss_pred CCCeeEEEE-cCCCCCccEEcchHHh
Confidence 85 445543 3457899999999863
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-66 Score=514.77 Aligned_cols=343 Identities=20% Similarity=0.299 Sum_probs=262.1
Q ss_pred CCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhhh--------------------------------------
Q 019039 4 RNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESL-------------------------------------- 45 (347)
Q Consensus 4 ~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~-------------------------------------- 45 (347)
+++||||+||.++|+|||||+.|+. +|++++++........
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 4589999999999999999999975 6999998653211000
Q ss_pred ---------------------------------hhccCCceEecccccc--ccCCceeeccccCC-----------eeec
Q 019039 46 ---------------------------------MEQELKDTIVGAAALD--LRHQLDVSYPVNNG-----------IVQN 79 (347)
Q Consensus 46 ---------------------------------~~~~~~~~~~g~~~~~--~~~~~~~~~p~~~g-----------~i~~ 79 (347)
.....+++++|+++.. .++.+.++|||++| .+.+
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 0012347899999875 45779999999999 4779
Q ss_pred HHHHHHHHHHHcccccCCCCCC---CeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCceEEEEec
Q 019039 80 WEDMGQVWDHAFFSELKIDPPE---CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDS 156 (347)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~---~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDi 156 (347)
||++|.+|+|+|.+.|++++++ +|||||||+++++..|++++|+|||+|+||+++++.+++||+||+|++||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999999999998765 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCC-----CCChHHHHHHHHHhccccccchHHHHhhc
Q 019039 157 GDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMN-----RTADFETVRQIKEKLCYISYDYKREYQLG 231 (347)
Q Consensus 157 G~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~-----~~~~~~~~~~iK~~~~~v~~~~~~~~~~~ 231 (347)
|++.|+|+||+||+++.+++.++++||+++|++|.++|..+++.+. ...++++++++|+++||++.++..+....
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~ 333 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE 333 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence 9999999999999999999999999999999999999999986654 23478899999999999987643221000
Q ss_pred -----------------------------------------------------------------------ccCccceee
Q 019039 232 -----------------------------------------------------------------------LETTILVKN 240 (347)
Q Consensus 232 -----------------------------------------------------------------------~~~~~~~~~ 240 (347)
.........
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS 413 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence 001123456
Q ss_pred eeCCCCceEEeCCccccccccccCCCCCC--------------------------------CCCCCHHHHHHHHHHhCC-
Q 019039 241 YTLPDGRVIKVGTERFQAPEALFTPELID--------------------------------VEGDGMADMVFRCIQEMD- 287 (347)
Q Consensus 241 ~~lpdg~~i~i~~~~~~~~E~lF~p~~~~--------------------------------~~~~~l~~~i~~~i~~~~- 287 (347)
+.+|+|..+.++.+++.+||.||+|.... .+..+|+++|.++|.+|+
T Consensus 414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~ 493 (593)
T 4fo0_A 414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS 493 (593)
T ss_dssp ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence 88899999999999999999999996321 235689999999999998
Q ss_pred HHHHHhhhcceEEecCCCCCCChHHHHHHHHhhcCCCC------Ceeeee--cCCccccccccccccC
Q 019039 288 IDNRMMLYQHIVLSGGSTMYPGLPSRYYVELFFASHDI------PLCFLR--NLGLHVYSLFLSVFVL 347 (347)
Q Consensus 288 ~d~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~~~~------~~~~~~--~~~~~~~s~w~G~~~~ 347 (347)
.|+|+.|++||+||||+|++|||.+||++||..+.|.. ++++.. ...++.|++|+||||+
T Consensus 494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSil 561 (593)
T 4fo0_A 494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVL 561 (593)
T ss_dssp HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHH
Confidence 69999999999999999999999999999999999852 355543 3357999999999985
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=7.9e-63 Score=469.42 Aligned_cols=344 Identities=34% Similarity=0.572 Sum_probs=297.0
Q ss_pred CC-CCCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhh------hhhccCCceEeccccccccCCceeecccc
Q 019039 1 MD-NRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEES------LMEQELKDTIVGAAALDLRHQLDVSYPVN 73 (347)
Q Consensus 1 ~~-~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~p~~ 73 (347)
|+ ..++||||+||.++|+||+|++.|+.++||++++++...... ..+....++++|+++...+ .+.+.+|++
T Consensus 1 m~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~-~~~~~~pi~ 79 (418)
T 1k8k_A 1 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP-TYATKWPIR 79 (418)
T ss_dssp --CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-TSEEECCEE
T ss_pred CCCCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC-CCEEecccc
Confidence 53 567899999999999999999999999999999876542100 0011223689999998776 488999999
Q ss_pred CCeeecHHHHHHHHHHHcccccCCCCCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhh--------
Q 019039 74 NGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA-------- 145 (347)
Q Consensus 74 ~g~i~~~~~l~~~~~~~~~~~l~~~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~-------- 145 (347)
+|.+.|||.++.+|+|+|.+.|+++++++++++++|++++...|+++.+++||.+|+++++++++|+||+|+
T Consensus 80 ~G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~ 159 (418)
T 1k8k_A 80 HGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG 159 (418)
T ss_dssp TTEESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCC
T ss_pred CCEECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccC
Confidence 999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred -CCCceEEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHhccccccch
Q 019039 146 -QGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDY 224 (347)
Q Consensus 146 -~g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~ 224 (347)
.+. +|+|||+|+++|+|+||++|+++.+++.+.++||+++|++|.++|.+++..+....+.+.++++|+++|++..++
T Consensus 160 ~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~ 238 (418)
T 1k8k_A 160 ERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDL 238 (418)
T ss_dssp SCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCH
T ss_pred CCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccH
Confidence 566 999999999999999999999999999999999999999999999998877666678899999999999999887
Q ss_pred HHHHhhccc-CccceeeeeCCCCc-----eEEeCCccccccccccCCCCCCCCC-CCHHHHHHHHHHhCCHHHHHhhhcc
Q 019039 225 KREYQLGLE-TTILVKNYTLPDGR-----VIKVGTERFQAPEALFTPELIDVEG-DGMADMVFRCIQEMDIDNRMMLYQH 297 (347)
Q Consensus 225 ~~~~~~~~~-~~~~~~~~~lpdg~-----~i~i~~~~~~~~E~lF~p~~~~~~~-~~l~~~i~~~i~~~~~d~r~~l~~n 297 (347)
..+.+.... .......|.+||+. .+.++.+||.+||.||+|++.+.+. .+|+++|.++|.+||.|+|+.+++|
T Consensus 239 ~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~ 318 (418)
T 1k8k_A 239 VKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKN 318 (418)
T ss_dssp HHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHC
T ss_pred HHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhc
Confidence 666433211 12234689999998 8999999999999999999888774 7999999999999999999999999
Q ss_pred eEEecCCCCCCChHHHHHHHHhhcC----------------C-CCCeeeeecCCccccccccccccC
Q 019039 298 IVLSGGSTMYPGLPSRYYVELFFAS----------------H-DIPLCFLRNLGLHVYSLFLSVFVL 347 (347)
Q Consensus 298 Ivl~GG~s~i~G~~erl~~eL~~~~----------------~-~~~~~~~~~~~~~~~s~w~G~~~~ 347 (347)
|+||||+|++|||.+||++||..+. | ..++++. ..+.+.|++|+||+++
T Consensus 319 IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~-~~~~~~~~~w~Ggsil 384 (418)
T 1k8k_A 319 IVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVI-THHMQRYAVWFGGSML 384 (418)
T ss_dssp EEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEE-CCTTCTTHHHHHHHHH
T ss_pred eEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEe-CCCccccceeHhHHHH
Confidence 9999999999999999999999875 3 3445543 3457899999999874
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=2.4e-52 Score=401.20 Aligned_cols=313 Identities=19% Similarity=0.312 Sum_probs=258.4
Q ss_pred CCCCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchh---------h-------------------------hh--
Q 019039 2 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYE---------E-------------------------SL-- 45 (347)
Q Consensus 2 ~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~---------~-------------------------~~-- 45 (347)
+.+.+|||..||.++|+|+|.|..|. .+|++++++..... . +.
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k 116 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYK 116 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcC
Confidence 45679999999999999999999997 67999986532110 0 00
Q ss_pred -----------------------h---------hc-cCCceEecccccc-ccCCceeeccccCCeee----c-------H
Q 019039 46 -----------------------M---------EQ-ELKDTIVGAAALD-LRHQLDVSYPVNNGIVQ----N-------W 80 (347)
Q Consensus 46 -----------------------~---------~~-~~~~~~~g~~~~~-~~~~~~~~~p~~~g~i~----~-------~ 80 (347)
+ +. ..+++++|+++.. .++.+.+++|+++|.|. | |
T Consensus 117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~W 196 (655)
T 4am6_A 117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELI 196 (655)
T ss_dssp CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccH
Confidence 0 00 1137889999987 57889999999999998 8 9
Q ss_pred HHHHHHHHHHcc-cccCCCCC---CCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCC-CceEEEEe
Q 019039 81 EDMGQVWDHAFF-SELKIDPP---ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG-LLTGLVID 155 (347)
Q Consensus 81 ~~l~~~~~~~~~-~~l~~~~~---~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g-~~tglVVD 155 (347)
|.+|.+|+|+|. +.|+++++ ++|++++||+++++..|++++|++||.|++|+++++.+++||+|++| .++|+|||
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVD 276 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVN 276 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEE
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEc
Confidence 999999999997 38999886 89999999999999999999999999999999999999999999999 69999999
Q ss_pred cCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcCC-----CCCCCChHHHHHHHHHhccccc-cchHHHHh
Q 019039 156 SGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGY-----SMNRTADFETVRQIKEKLCYIS-YDYKREYQ 229 (347)
Q Consensus 156 iG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~iK~~~~~v~-~~~~~~~~ 229 (347)
+|++.|+|+||++|+++.+++.++++||+++|++|.++|.++|+ .++...+.+++++|||++|||+ .|+..
T Consensus 277 iG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~--- 353 (655)
T 4am6_A 277 IGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAV--- 353 (655)
T ss_dssp ECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCS---
T ss_pred CCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchhh---
Confidence 99999999999999999999999999999999999999999986 4566678999999999999994 44310
Q ss_pred hcccCccceeeeeCCCC----ceEEeCCccccccccccCCCCCCC-----------------------------------
Q 019039 230 LGLETTILVKNYTLPDG----RVIKVGTERFQAPEALFTPELIDV----------------------------------- 270 (347)
Q Consensus 230 ~~~~~~~~~~~~~lpdg----~~i~i~~~~~~~~E~lF~p~~~~~----------------------------------- 270 (347)
.........|++ ..+.++.|||.+||.||+|.+++.
T Consensus 354 -----q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~ 428 (655)
T 4am6_A 354 -----QLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQF 428 (655)
T ss_dssp -----EEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHHHH
T ss_pred -----hhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccchhHH
Confidence 011111223543 358899999999999999953210
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHh-C-CHHHH--HhhhcceEEec
Q 019039 271 --------------------------------------------EGDGMADMVFRCIQE-M-DIDNR--MMLYQHIVLSG 302 (347)
Q Consensus 271 --------------------------------------------~~~~l~~~i~~~i~~-~-~~d~r--~~l~~nIvl~G 302 (347)
...+|.++|.+||.. | ..|.+ +.+++||+++|
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivG 508 (655)
T 4am6_A 429 ESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVG 508 (655)
T ss_dssp HHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEES
T ss_pred hhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEc
Confidence 024899999999983 3 22444 49999999999
Q ss_pred CCCCCCChHHHHHHHHhhcCC
Q 019039 303 GSTMYPGLPSRYYVELFFASH 323 (347)
Q Consensus 303 G~s~i~G~~erl~~eL~~~~~ 323 (347)
|+|++|||...|.+.|....|
T Consensus 509 ggski~g~~~~L~dri~i~rp 529 (655)
T 4am6_A 509 GSSKIPALDFILTDRINIWRP 529 (655)
T ss_dssp TTCCCTTHHHHHHHHHHHHSC
T ss_pred CcccCccHHHHHHHHHHhhCc
Confidence 999999999988888876544
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4.7e-35 Score=271.21 Aligned_cols=307 Identities=14% Similarity=0.121 Sum_probs=232.8
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhhhhhccCCceEecccccccc----CCceeeccccCCe
Q 019039 1 MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLR----HQLDVSYPVNNGI 76 (347)
Q Consensus 1 ~~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~p~~~g~ 76 (347)
|+ +.+|+||+||+++++|++++. |...+||+++..... .+.+++|+++.... ....+.+|+++|.
T Consensus 1 ~~-~~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~---------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~ 69 (344)
T 1jce_A 1 ML-RKDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT---------GEILKVGLEAKNMIGKTPATIKAIRPMRDGV 69 (344)
T ss_dssp ----CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT---------CCEEEESHHHHTTTTCCCTTEEEECCEETTE
T ss_pred CC-CceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC---------CcEEEEcHHHHHhcccCCCCeEEEecCCCCe
Confidence 44 469999999999999999876 777899999875421 12467999886532 3456689999999
Q ss_pred eecHHHHHHHHHHHcccccCCC-CCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCC-----ce
Q 019039 77 VQNWEDMGQVWDHAFFSELKID-PPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL-----LT 150 (347)
Q Consensus 77 i~~~~~l~~~~~~~~~~~l~~~-~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~-----~t 150 (347)
+.||+..+++|.+++.+..... ....++++++|..++..+|+.+.+. +|.+|++.+.++++|+||+++++. .+
T Consensus 70 i~~~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~ 148 (344)
T 1jce_A 70 IADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSG 148 (344)
T ss_dssp ESSHHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSC
T ss_pred eCChHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCce
Confidence 9999999999999994332322 4468899999999999999998884 699999999999999999999986 68
Q ss_pred EEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHhccccccchHHHHhh
Q 019039 151 GLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQL 230 (347)
Q Consensus 151 glVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~ 230 (347)
.+|||+|+++|+++++..|..+. ....++||+++|+.|.+.+.++. ....+.+.++++|++++....+...+..
T Consensus 149 ~lVvDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~~---~~~~~~~~ae~~K~~l~~~~~~~~~~~~- 222 (344)
T 1jce_A 149 NMVVDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRETY---RVAIGERTAERVKIEIGNVFPSKENDEL- 222 (344)
T ss_dssp EEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHHH---CEECCHHHHHHHHHHHCBCSCCHHHHHC-
T ss_pred EEEEEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHHh---CcccCHHHHHHHHHHHhccCccccCCcc-
Confidence 99999999999999999998774 35789999999999999987651 1123578899999999877644321110
Q ss_pred cccCccceeeeeCCCCc--eEEeCCcccc-ccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhh-cceEEecCCCC
Q 019039 231 GLETTILVKNYTLPDGR--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLY-QHIVLSGGSTM 306 (347)
Q Consensus 231 ~~~~~~~~~~~~lpdg~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~-~nIvl~GG~s~ 306 (347)
...-....+.+|. .+.++.+++. +.+.+++ .+.+.|.+++.+++.+++..++ ++|+|+||+|+
T Consensus 223 ----~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~---------~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ 289 (344)
T 1jce_A 223 ----ETTVSGIDLSTGLPRKLTLKGGEVREALRSVVV---------AIVESVRTTLEKTPPELVSDIIERGIFLTGGGSL 289 (344)
T ss_dssp ----EEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHH---------HHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGC
T ss_pred ----eEEEeccccCCCCceeEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHhCCchhccchhhCcEEEECcccc
Confidence 0000111233554 4566655553 2233333 5888999999999988888888 79999999999
Q ss_pred CCChHHHHHHHHhhcCCCCCeeeeecCCcccccccccccc
Q 019039 307 YPGLPSRYYVELFFASHDIPLCFLRNLGLHVYSLFLSVFV 346 (347)
Q Consensus 307 i~G~~erl~~eL~~~~~~~~~~~~~~~~~~~~s~w~G~~~ 346 (347)
+|||.++|++++.. ++. ....+.++.|.|+.+
T Consensus 290 ~p~l~~~l~~~~~~-----~v~---~~~~p~~ava~Gaa~ 321 (344)
T 1jce_A 290 LRGLDTLLQKETGI-----SVI---RSEEPLTAVAKGAGM 321 (344)
T ss_dssp SBTHHHHHHHHHSS-----CEE---ECSSTTTHHHHHHHH
T ss_pred chHHHHHHHHHHCC-----Ccc---ccCChHHHHHHHHHH
Confidence 99999999999953 222 233566788888754
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.90 E-value=2.7e-24 Score=208.58 Aligned_cols=296 Identities=17% Similarity=0.159 Sum_probs=196.1
Q ss_pred CeEEEeCCCceEEEeecCCCCCCcc--------cccceeecCcchhhhhhhccCCceEecccccccc--CC---ceee--
Q 019039 5 NVVVCDNGTGYVKCGFAGENFPNSV--------FPCVVGRPMLRYEESLMEQELKDTIVGAAALDLR--HQ---LDVS-- 69 (347)
Q Consensus 5 ~~vViD~Gs~~ik~G~ag~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~---~~~~-- 69 (347)
.+|.||+||++++++++.+..|..+ +||+++.. ....++|+++.... +. ..+.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~------------~~~~~vG~~A~~~~~~~p~~~~~~Kr~ 70 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK------------NGERLVGEVAKRQAITNPNTIISIKRH 70 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES------------SSSEEESHHHHTTTTTCSSEEECGGGT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC------------CCcEEECHHHHHhHHhCCCcHHHHHHh
Confidence 6899999999999999987777766 67777651 12567888775421 11 1111
Q ss_pred --cccc---CCeeecHHHHHHHHHHHcccccCC------CCCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehh
Q 019039 70 --YPVN---NGIVQNWEDMGQVWDHAFFSELKI------DPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQ 138 (347)
Q Consensus 70 --~p~~---~g~i~~~~~l~~~~~~~~~~~l~~------~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~ 138 (347)
+|++ +|. +|. .++++.++| ++|.. ......++++.|.+++..+|+.+.+. ++.+|++.+.++++
T Consensus 71 lg~p~~~~~~g~--~~~-~~ei~a~~L-~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~E 145 (509)
T 2v7y_A 71 MGTDYKVEIEGK--QYT-PQEISAIIL-QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINE 145 (509)
T ss_dssp TTSCCCEEETTE--EEC-HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEH
T ss_pred cCCCcEEEECCE--EEc-HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecC
Confidence 1555 664 333 344555554 23321 23347899999999999999988886 58999999999999
Q ss_pred hhHhhhhCCC-----ceEEEEecCCCceEEEEee--cCee-cccceeEecccHHHHHHHHHHHHhhc-----CCCCCCC-
Q 019039 139 AVLTLYAQGL-----LTGLVIDSGDGVTHVVPVV--DGYS-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRT- 204 (347)
Q Consensus 139 ~~~a~~~~g~-----~tglVVDiG~~~t~v~pv~--dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~- 204 (347)
|.||++++|. .+.+|+|+|+++++++.+. +|.. +.......++||+++++.|.+++.++ +..+...
T Consensus 146 p~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~ 225 (509)
T 2v7y_A 146 PTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDK 225 (509)
T ss_dssp HHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCH
T ss_pred HHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCH
Confidence 9999999986 4789999999999999776 3532 33334557999999999999887653 3333211
Q ss_pred ----ChHHHHHHHHHhccccccchHHHHhhcccCccceeeeeCCCC---ceEEeCCcccc-ccccccCCCCCCCCCCCHH
Q 019039 205 ----ADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTLPDG---RVIKVGTERFQ-APEALFTPELIDVEGDGMA 276 (347)
Q Consensus 205 ----~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpdg---~~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~ 276 (347)
.-.+.++++|+.++..... .-..+..+..++| ..+.++.+.|. +.+.+|+ .+.
T Consensus 226 ~~~~~l~~~aE~~K~~ls~~~~~----------~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~---------~i~ 286 (509)
T 2v7y_A 226 MALQRLKDAAEKAKKELSGVTQT----------QISLPFISANENGPLHLEMTLTRAKFEELSAHLVE---------RTM 286 (509)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSEE----------EEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHH---------TTH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcE----------EEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHH---------HHH
Confidence 0135677778776643200 0000001111223 23455555442 3344444 577
Q ss_pred HHHHHHHHhCCHHHHHhhhcceEEecCCCCCCChHHHHHHHHhhcCCCCCeeeeecCCcccccccccccc
Q 019039 277 DMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRYYVELFFASHDIPLCFLRNLGLHVYSLFLSVFV 346 (347)
Q Consensus 277 ~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~~~~~~~~~~~~~~~~~s~w~G~~~ 346 (347)
+.+.+++.++.. .....++|+|+||+|++|++.++|++.+... + .....+.++.|.||.+
T Consensus 287 ~~i~~~L~~a~~--~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~-----~---~~~~~p~~aVa~Gaa~ 346 (509)
T 2v7y_A 287 GPVRQALQDAGL--TPADIDKVILVGGSTRIPAVQEAIKRELGKE-----P---HKGVNPDEVVAIGAAI 346 (509)
T ss_dssp HHHHHHHHHHTC--CGGGCSEEEEESGGGGCHHHHHHHHHHHSSC-----C---BCCSCTTTHHHHHHHH
T ss_pred HHHHHHHHHcCC--ChhHCcEEEEECCcccChHHHHHHHHHhCCC-----c---CcCCCchhhhHhhHHH
Confidence 888888877642 3345689999999999999999999999531 1 1233456778888754
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.88 E-value=1.4e-21 Score=174.59 Aligned_cols=241 Identities=18% Similarity=0.168 Sum_probs=176.2
Q ss_pred CeEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhhhhhccCCceEeccccccccCCceeeccccCCeeecHHHHH
Q 019039 5 NVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMG 84 (347)
Q Consensus 5 ~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~~~l~ 84 (347)
-.++||+||.++|+....++. . .++. + ..-..|+++|.+.||+..+
T Consensus 29 ~~~gIDiGS~s~k~vi~~~~~-~-----~l~~-------------------~---------~~~~~~l~~g~i~d~~~~~ 74 (272)
T 3h1q_A 29 YKVGVDLGTADIVLVVTDQEG-I-----PVAG-------------------A---------LKWASVVKDGLVVDYIGAI 74 (272)
T ss_dssp CEEEEECCSSEEEEEEECTTC-C-----EEEE-------------------E---------EEECCCCBTTBCTTHHHHH
T ss_pred EEEEEEcccceEEEEEECCCC-c-----EEEE-------------------E---------eecccccCCCEEEcHHHHH
Confidence 478999999999998843221 1 1111 0 0123488999999999999
Q ss_pred HHHHHHcccccCC-CCCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCceEEEEecCCCceEE
Q 019039 85 QVWDHAFFSELKI-DPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHV 163 (347)
Q Consensus 85 ~~~~~~~~~~l~~-~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t~v 163 (347)
.+|++++...... ......++++.|.......|+ .++.+++.+|++...+..++.++++++|..+++|||+|+++|.+
T Consensus 75 ~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~ 153 (272)
T 3h1q_A 75 QIVRELKAKVERLLGSELFQAATAIPPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGI 153 (272)
T ss_dssp HHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEE
T ss_pred HHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEE
Confidence 9999998543332 223356777777766655554 55667899999999999999999999999999999999999999
Q ss_pred EEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHhccccccchHHHHhhcccCccceeeeeC
Q 019039 164 VPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTL 243 (347)
Q Consensus 164 ~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~~~l 243 (347)
+++.+|.++.. ..+++||.++++.+.+.+. .+.+.++++|++++.- .+.
T Consensus 154 ~~~~~g~~~~~--~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~~-----~~~--------------- 202 (272)
T 3h1q_A 154 AVIEKGKITAT--FDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSRH-----REI--------------- 202 (272)
T ss_dssp EEEETTEEEEE--CCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTTH-----HHH---------------
T ss_pred EEEECCEEEEE--ecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCCH-----HHH---------------
Confidence 99999988743 5789999999999998875 3578889999886510 010
Q ss_pred CCCceEEeCCccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCChHHHHHHHHhhcCC
Q 019039 244 PDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRYYVELFFASH 323 (347)
Q Consensus 244 pdg~~i~i~~~~~~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~~ 323 (347)
..+.+.++. .+.+.+.+.+++++ ..++|+|+||+|++|||.++|++++..
T Consensus 203 ------------~~~~~~~~~---------~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~~--- 252 (272)
T 3h1q_A 203 ------------MRVVRPVIE---------KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLGK--- 252 (272)
T ss_dssp ------------HHHHHHHHH---------HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHSS---
T ss_pred ------------HHHHHHHHH---------HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhCC---
Confidence 011111222 36667777777665 135899999999999999999999943
Q ss_pred CCCeeeeecCCcccccccccccc
Q 019039 324 DIPLCFLRNLGLHVYSLFLSVFV 346 (347)
Q Consensus 324 ~~~~~~~~~~~~~~~s~w~G~~~ 346 (347)
++. ....+.++.|+||.+
T Consensus 253 --~v~---~~~~p~~a~a~Gaal 270 (272)
T 3h1q_A 253 --EVQ---VPIHPLLVTPLGIAL 270 (272)
T ss_dssp --CCB---CCSSGGGHHHHHHHT
T ss_pred --Ccc---ccCChHHHHHHHHHh
Confidence 211 235678999999865
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.88 E-value=6.6e-22 Score=185.45 Aligned_cols=234 Identities=16% Similarity=0.100 Sum_probs=157.7
Q ss_pred HHHHHHHHHHcc---cccCCCCCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCc------eE
Q 019039 81 EDMGQVWDHAFF---SELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL------TG 151 (347)
Q Consensus 81 ~~l~~~~~~~~~---~~l~~~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~------tg 151 (347)
+....+++++.. ..++ .....++++.|..++..+|+.+.+. ++..|++.+.++++|.||+++++.. +.
T Consensus 114 ~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~ 190 (383)
T 1dkg_D 114 QISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTI 190 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEE
Confidence 344445555542 2232 2346799999999999999988886 5889999999999999999987653 68
Q ss_pred EEEecCCCceEEEEeecC------eec-ccceeEecccHHHHHHHHHHHHhhc-----CCCCCCC-----ChHHHHHHHH
Q 019039 152 LVIDSGDGVTHVVPVVDG------YSF-PHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRT-----ADFETVRQIK 214 (347)
Q Consensus 152 lVVDiG~~~t~v~pv~dG------~~~-~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~iK 214 (347)
+|+|+|+++|+++.+..+ ... .......++||+++|+.|.+++.++ +..+... .-.+.++++|
T Consensus 191 lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K 270 (383)
T 1dkg_D 191 AVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAK 270 (383)
T ss_dssp EEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHH
Confidence 999999999999988754 221 1223457999999999999888654 4333211 0136678888
Q ss_pred HhccccccchHHHHhhcccCccceeeeeCCCC-c--eEEeCCcccc-ccccccCCCCCCCCCCCHHHHHHHHHHhCCHHH
Q 019039 215 EKLCYISYDYKREYQLGLETTILVKNYTLPDG-R--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDN 290 (347)
Q Consensus 215 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpdg-~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~ 290 (347)
++++..... .-..+..+..++| . .+.++.+.|. +.+.+++ .+.+.|.+++.+++.
T Consensus 271 ~~ls~~~~~----------~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~---------~i~~~i~~~l~~~~~-- 329 (383)
T 1dkg_D 271 IELSSAQQT----------DVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN---------RSIELLKVALQDAGL-- 329 (383)
T ss_dssp HHTTSSSEE----------EEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHH---------HHHHHHHHHHHTTTC--
T ss_pred HHhCCCCce----------EEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC--
Confidence 887653210 0001111233445 2 2455555442 3333333 477888888887753
Q ss_pred HHhhhcceEEecCCCCCCChHHHHHHHHhhcCCCCCeeeeecCCcccccccccccc
Q 019039 291 RMMLYQHIVLSGGSTMYPGLPSRYYVELFFASHDIPLCFLRNLGLHVYSLFLSVFV 346 (347)
Q Consensus 291 r~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~~~~~~~~~~~~~~~~~s~w~G~~~ 346 (347)
+....++|+|+||+|++||+.++|++++.. ++ .....+.++.|.||.+
T Consensus 330 ~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~-----~v---~~~~~p~~ava~Gaa~ 377 (383)
T 1dkg_D 330 SVSDIDDVILVGGQTRMPMVQKKVAEFFGK-----EP---RKDVNPDEAVAIGAAV 377 (383)
T ss_dssp CTTTCCEEEEESGGGGSHHHHHHHHHHHSS-----CC---BCSSCTTTHHHHHHHH
T ss_pred CHhhCCEEEEecCccccHHHHHHHHHHhCC-----CC---CCCcChHHHHHHHHHH
Confidence 334558999999999999999999999953 11 2234567899999864
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.85 E-value=2.4e-21 Score=182.29 Aligned_cols=210 Identities=17% Similarity=0.127 Sum_probs=137.7
Q ss_pred CCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCce------EEEEecCCCceEEEEee--cCee
Q 019039 100 PECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLT------GLVIDSGDGVTHVVPVV--DGYS 171 (347)
Q Consensus 100 ~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~t------glVVDiG~~~t~v~pv~--dG~~ 171 (347)
.-..++++.|..++..+|+.+.+.+ +..|++.+.++++|.||+++++... -+|+|+|+++|+++.+. ++..
T Consensus 152 ~~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~ 230 (394)
T 3qfu_A 152 KVTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVF 230 (394)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CcceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEE
Confidence 3468999999999999999887776 8999999999999999999987543 49999999999888775 3332
Q ss_pred c-ccceeEecccHHHHHHHHHHHHhhc-----CCCCCCCChHH-------HHHHHHHhccccccchHHHHhhcccCccce
Q 019039 172 F-PHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTADFE-------TVRQIKEKLCYISYDYKREYQLGLETTILV 238 (347)
Q Consensus 172 ~-~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~~~-------~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~ 238 (347)
. .......++||+++++.|.+.+..+ +..+ ..+.. .++++|+.+... ..
T Consensus 231 ~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~--~~~~~~~~~l~~~ae~~K~~ls~~----------------~~ 292 (394)
T 3qfu_A 231 EVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDV--SDNNKALAKLKREAEKAKRALSSQ----------------MS 292 (394)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCC--TTCHHHHHHHHHHHHHHHHHTTTC----------------SE
T ss_pred EEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCC--CcCHHHHHHHHHHHHHHHHHcccC----------------Cc
Confidence 2 2223347999999999998887532 2221 12222 334444433211 11
Q ss_pred eeeeC---CCCc--eEEeCCccc-cccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCChHH
Q 019039 239 KNYTL---PDGR--VIKVGTERF-QAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPS 312 (347)
Q Consensus 239 ~~~~l---pdg~--~i~i~~~~~-~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~e 312 (347)
..+.+ .+|. .+.++.+.+ .+.+.+++ .+.+.|.+++.++..+ ....++|+|+||+|++|++.+
T Consensus 293 ~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~---------~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~ 361 (394)
T 3qfu_A 293 TRIEIDSFVDGIDLSETLTRAKFEELNLDLFK---------KTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQ 361 (394)
T ss_dssp EEEEEEEEETTEEEEEEEEHHHHHHHHHHHHH---------HTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHH
T ss_pred EEEEEEeccCCceeEEEEEHHHHHHHHHHHHH---------HHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHH
Confidence 11111 1232 234444333 22233333 4667777777765443 345589999999999999999
Q ss_pred HHHHHHhhcCCCCCeeeeecCCcccccccccccc
Q 019039 313 RYYVELFFASHDIPLCFLRNLGLHVYSLFLSVFV 346 (347)
Q Consensus 313 rl~~eL~~~~~~~~~~~~~~~~~~~~s~w~G~~~ 346 (347)
+|++.+.. .++ .....+.++.|.||.+
T Consensus 362 ~l~~~~~~----~~v---~~~~~p~~ava~Gaa~ 388 (394)
T 3qfu_A 362 LLESYFDG----KKA---SKGINPDEAVAYGAAV 388 (394)
T ss_dssp HHHHHTTT----CCC---BCCSCTTTHHHHHHHH
T ss_pred HHHHHcCC----CCC---CCCcCHHHHHHHHHHH
Confidence 99998832 221 1223466788888864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.80 E-value=6.7e-20 Score=173.00 Aligned_cols=209 Identities=18% Similarity=0.167 Sum_probs=135.6
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCc---------eEEEEecCCCceEEEEee--cC
Q 019039 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL---------TGLVIDSGDGVTHVVPVV--DG 169 (347)
Q Consensus 101 ~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~---------tglVVDiG~~~t~v~pv~--dG 169 (347)
...++++.|..++..+|+.+.+. ++..|++.+.++++|.||+++++.. +-+|+|+|+++|+++.+. +|
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC
Confidence 46799999999999999887776 7999999999999999999988653 349999999999998774 43
Q ss_pred ee-cccceeEecccHHHHHHHHHHHHhhc-----CCCCCCCChH-------HHHHHHHHhccccccchHHHHhhcccCcc
Q 019039 170 YS-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTADF-------ETVRQIKEKLCYISYDYKREYQLGLETTI 236 (347)
Q Consensus 170 ~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~~-------~~~~~iK~~~~~v~~~~~~~~~~~~~~~~ 236 (347)
.. +.......++||+++++.|.+.+..+ +..+. .+. ..+++.|+.+...
T Consensus 237 ~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~--~~~~~~~~l~~~ae~~K~~ls~~---------------- 298 (404)
T 3i33_A 237 IFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIG--PNKRAVRRLRTACERAKRTLSSS---------------- 298 (404)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCT--TCHHHHHHHHHHHHHHHHHTTTS----------------
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcC--CCHHHHHHHHHHHHHHHHhCCcC----------------
Confidence 22 23333457999999999998887432 22221 112 3344455443211
Q ss_pred ceeeeeC---CCCc--eEEeCCccc-cccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCCh
Q 019039 237 LVKNYTL---PDGR--VIKVGTERF-QAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGL 310 (347)
Q Consensus 237 ~~~~~~l---pdg~--~i~i~~~~~-~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~ 310 (347)
....+.+ .+|. .+.++.+.+ .+.+.+++ .+.+.|.+++.+... .....+.|+|+||+|++|++
T Consensus 299 ~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~---------~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l 367 (404)
T 3i33_A 299 TQASIEIDSLYEGVDFYTSITRARFEELNADLFR---------GTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKI 367 (404)
T ss_dssp SEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHH---------HTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHH
T ss_pred cceEEEEeeccCCceeEEEEcHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHH
Confidence 1111111 1232 234444333 22233333 356677777765432 23445889999999999999
Q ss_pred HHHHHHHHhhcCCCCCeeeeecCCcccccccccccc
Q 019039 311 PSRYYVELFFASHDIPLCFLRNLGLHVYSLFLSVFV 346 (347)
Q Consensus 311 ~erl~~eL~~~~~~~~~~~~~~~~~~~~s~w~G~~~ 346 (347)
.++|++.+.. .++ .....+.++.+.||.+
T Consensus 368 ~~~l~~~~~~----~~v---~~~~~p~~ava~Gaa~ 396 (404)
T 3i33_A 368 QKLLQDFFNG----KEL---NKSINPDEAVAYGAAV 396 (404)
T ss_dssp HHHHHHHTTT----CCC---BCSSCTTTHHHHHHHH
T ss_pred HHHHHHHcCC----CCC---CCCcCHHHHHHHHHHH
Confidence 9999998832 121 1223455777777753
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.75 E-value=7.7e-18 Score=164.70 Aligned_cols=191 Identities=17% Similarity=0.201 Sum_probs=129.1
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCC-------ceEEEEecCCCceEEEEee--cCee
Q 019039 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL-------LTGLVIDSGDGVTHVVPVV--DGYS 171 (347)
Q Consensus 101 ~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~-------~tglVVDiG~~~t~v~pv~--dG~~ 171 (347)
-..++++.|..++..+|+.+.+ +++..|++.+.++++|.||++++|. .+.+|+|+|+++++++.+. +|..
T Consensus 139 v~~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~ 217 (554)
T 1yuw_A 139 VTNAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIF 217 (554)
T ss_dssp CCEEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcE
Confidence 3579999999999999888877 5688999999999999999998864 4679999999999999886 6643
Q ss_pred -cccceeEecccHHHHHHHHHHHHhh-----cCCCCCCCC-----hHHHHHHHHHhccccccchHHHHhhcccCccceee
Q 019039 172 -FPHLTKRMNVAGRHITSYLVDLLSR-----RGYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTILVKN 240 (347)
Q Consensus 172 -~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~ 240 (347)
+.......++||+++++.|.+.+.. .+..+.... -...++++|+.++... ...
T Consensus 218 ~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~----------------~~~ 281 (554)
T 1yuw_A 218 EVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST----------------QAS 281 (554)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS----------------EEE
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc----------------eEE
Confidence 2334456799999999999888753 232322110 1245566666554221 112
Q ss_pred eeCC---CCc--eEEeCCccc-cccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCChHHHH
Q 019039 241 YTLP---DGR--VIKVGTERF-QAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRY 314 (347)
Q Consensus 241 ~~lp---dg~--~i~i~~~~~-~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~erl 314 (347)
+.++ +|. .+.++.+.| .+.+.+|+ .+.+.+.+++..... ...-.+.|+|+||+|++|++.++|
T Consensus 282 i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~---------~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l 350 (554)
T 1yuw_A 282 IEIDSLYEGIDFYTSITRARFEELNADLFR---------GTLDPVEKALRDAKL--DKSQIHDIVLVGGSTRIPKIQKLL 350 (554)
T ss_dssp EEETTCSSSCCEEEEEEHHHHHHHTHHHHH---------HTTHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHH
T ss_pred EEEeeccCCceEEEEEEHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC--ChhhCcEEEEECCcccChHHHHHH
Confidence 2222 332 233444333 22333333 244566666665421 223458899999999999999999
Q ss_pred HHHHh
Q 019039 315 YVELF 319 (347)
Q Consensus 315 ~~eL~ 319 (347)
++.+.
T Consensus 351 ~~~f~ 355 (554)
T 1yuw_A 351 QDFFN 355 (554)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99885
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.74 E-value=1.7e-17 Score=163.73 Aligned_cols=191 Identities=17% Similarity=0.163 Sum_probs=130.6
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCc------eEEEEecCCCceEEEEeec------
Q 019039 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL------TGLVIDSGDGVTHVVPVVD------ 168 (347)
Q Consensus 101 ~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVDiG~~~t~v~pv~d------ 168 (347)
-..++++.|.+++..+|+.+.+. .+..|++.+.++++|.||++++|.. +.+|+|+|+++++++.+.-
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCC
Confidence 45789999999999998877766 5788999999999999999988743 3699999999999998863
Q ss_pred Cee-cccceeEecccHHHHHHHHHHHHhhc-----CCCCCCCC-----hHHHHHHHHHhccccccchHHHHhhcccCccc
Q 019039 169 GYS-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTIL 237 (347)
Q Consensus 169 G~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~ 237 (347)
|.. +.......++||+++++.|.+++.++ +..+.... -...++++|+.++...
T Consensus 214 g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~---------------- 277 (605)
T 2kho_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ---------------- 277 (605)
T ss_dssp CEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------
T ss_pred CeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------
Confidence 432 22233456899999999998887653 33332110 1245666666654321
Q ss_pred eeeeeC------CCC-c--eEEeCCccc-cccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCC
Q 019039 238 VKNYTL------PDG-R--VIKVGTERF-QAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMY 307 (347)
Q Consensus 238 ~~~~~l------pdg-~--~i~i~~~~~-~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i 307 (347)
...+.+ ++| . .+.++.+.| .+.+.+|+ .+.+.+.+++..... ...-.+.|+|+||+|++
T Consensus 278 ~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~---------~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~sri 346 (605)
T 2kho_A 278 QTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN---------RSIEPLKVALQDAGL--SVSDIDDVILVGGQTRM 346 (605)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTG---------GGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGS
T ss_pred ceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC--ChhhCceEEEECCcccC
Confidence 111111 123 1 234544444 23344444 466777888876542 22334789999999999
Q ss_pred CChHHHHHHHHh
Q 019039 308 PGLPSRYYVELF 319 (347)
Q Consensus 308 ~G~~erl~~eL~ 319 (347)
|++.++|++.+.
T Consensus 347 p~v~~~l~~~fg 358 (605)
T 2kho_A 347 PMVQKKVAEFFG 358 (605)
T ss_dssp HHHHHHHHHHHS
T ss_pred hHHHHHHHHhcC
Confidence 999999999985
No 16
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.67 E-value=1.4e-15 Score=141.98 Aligned_cols=168 Identities=15% Similarity=0.153 Sum_probs=108.5
Q ss_pred hhcccccCCCeEeeehhhhHhhhhCC-------CceEEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHH
Q 019039 122 ETMFEKYNFAGVFIQIQAVLTLYAQG-------LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLL 194 (347)
Q Consensus 122 e~lfe~~~~~~v~~~~~~~~a~~~~g-------~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l 194 (347)
.-+++..|++...+..+|++++++++ ....+|||+|+++|+++.+.+|.++.. ...++||+++++.+.+.+
T Consensus 157 ~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~~--~~~~~GG~~i~~~i~~~~ 234 (377)
T 2ych_A 157 LEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAV--RVLTLSGKDFTEAIARSF 234 (377)
T ss_dssp HHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEEE--EEESCSHHHHHHHHHHHT
T ss_pred HHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEEE--EeeechHHHHHHHHHHHh
Confidence 33458899999999999999998874 234699999999999999999988753 578999999999998743
Q ss_pred hhcCCCCCCCChHHHHHHHHHhccccccchHHHHhhcccCccceeeeeCCCCceEEeCCccc-cccccccCCCCCCCCCC
Q 019039 195 SRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTLPDGRVIKVGTERF-QAPEALFTPELIDVEGD 273 (347)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpdg~~i~i~~~~~-~~~E~lF~p~~~~~~~~ 273 (347)
. .+.+.++++|+++++...+...+. ..+.+++ ..+.++.+.+ .+.+.+++
T Consensus 235 ~---------~~~~~aE~~K~~~~~~~~~~~~~~----------~~i~~~~-~~~~i~~~~~~~~i~~~~~--------- 285 (377)
T 2ych_A 235 N---------LDLLAAEEVKRTYGMATLPTEDEE----------LLLDFDA-ERERYSPGRIYDAIRPVLV--------- 285 (377)
T ss_dssp T---------CCHHHHHHHHHHTC------------------------------------CHHHHHHHHHH---------
T ss_pred C---------CCHHHHHHHHhhcccccccccccc----------ccccccc-ccccCCHHHHHHHHHHHHH---------
Confidence 2 247889999998876543211110 0112222 2223322221 11122222
Q ss_pred CHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCChHHHHHHHHhh
Q 019039 274 GMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRYYVELFF 320 (347)
Q Consensus 274 ~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~ 320 (347)
.+.+.|.+++..++...+....++|+|+||+|++||+.++|++.+..
T Consensus 286 ~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~ 332 (377)
T 2ych_A 286 ELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGV 332 (377)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCC
Confidence 35566666666554455566778999999999999999999999963
No 17
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.67 E-value=5.1e-16 Score=154.59 Aligned_cols=190 Identities=11% Similarity=0.155 Sum_probs=128.9
Q ss_pred CeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCC------------ceEEEEecCCCceEEEEee--
Q 019039 102 CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL------------LTGLVIDSGDGVTHVVPVV-- 167 (347)
Q Consensus 102 ~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~------------~tglVVDiG~~~t~v~pv~-- 167 (347)
..++++.|.+++..+|+.+.+. .+..|++.+.++++|.||++++|. .+.+|+|+|+++++++.+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~A-a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADA-ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 5799999999999998887775 588999999999999999987642 3579999999999999885
Q ss_pred cCee-cccceeEecccHHHHHHHHHHHHhh-----cCCCCCCCC-----hHHHHHHHHHhccccccchHHHHhhcccCcc
Q 019039 168 DGYS-FPHLTKRMNVAGRHITSYLVDLLSR-----RGYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTI 236 (347)
Q Consensus 168 dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~ 236 (347)
+|.. +.......++||+++++.|.+.+.. .+..+.... -...++++|+.++...
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~--------------- 282 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT--------------- 282 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS---------------
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC---------------
Confidence 6654 3333346799999999999988853 232221100 0245566666554211
Q ss_pred ceeeeeCC---CCc--eEEeCCccc-cccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCCh
Q 019039 237 LVKNYTLP---DGR--VIKVGTERF-QAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGL 310 (347)
Q Consensus 237 ~~~~~~lp---dg~--~i~i~~~~~-~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~ 310 (347)
...+.++ +|. .+.++.+.| .+.+.+|+ .+.+.+.+++..... ...-...|+|+||+|++|++
T Consensus 283 -~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~---------~i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~v 350 (675)
T 3d2f_A 283 -NAPFSVESVMNDVDVSSQLSREELEELVKPLLE---------RVTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPTL 350 (675)
T ss_dssp -EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHT---------TTTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHHH
T ss_pred -ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHhCC--ChhhCcEEEEECCCccChHH
Confidence 1111121 122 344554444 23444555 466677777765421 11234789999999999999
Q ss_pred HHHHHHHHh
Q 019039 311 PSRYYVELF 319 (347)
Q Consensus 311 ~erl~~eL~ 319 (347)
.++|++.+.
T Consensus 351 ~~~l~~~fg 359 (675)
T 3d2f_A 351 KQSISEAFG 359 (675)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhcC
Confidence 999999985
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.64 E-value=7.9e-16 Score=145.30 Aligned_cols=210 Identities=13% Similarity=0.159 Sum_probs=130.7
Q ss_pred HHHHHHHHHHcc---cccCCCCCCCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCCc--------
Q 019039 81 EDMGQVWDHAFF---SELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL-------- 149 (347)
Q Consensus 81 ~~l~~~~~~~~~---~~l~~~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~-------- 149 (347)
+....+++++.. ..++ .....++++.|..++..+|+.+.+. .+..|+..+.++.+|.||+++++..
T Consensus 129 ev~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~ 205 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAA-AAAADLEVLQLISEPAAAVLAYDARPEATISDK 205 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTC------CCE
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEEcCHHHHHHHHhcccccCCCCC
Confidence 444555555542 2333 3446799999999998888776665 5778999999999999999999764
Q ss_pred eEEEEecCCCceEEEEe--ecCee-cccceeEecccHHHHHHHHHHHHhhcC---CC--CCCCChH-------HHHHHHH
Q 019039 150 TGLVIDSGDGVTHVVPV--VDGYS-FPHLTKRMNVAGRHITSYLVDLLSRRG---YS--MNRTADF-------ETVRQIK 214 (347)
Q Consensus 150 tglVVDiG~~~t~v~pv--~dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~---~~--~~~~~~~-------~~~~~iK 214 (347)
+.+|+|+|+++|+++.+ .+|.. +.......++||+++++.|.+.+..+- .. .....+. ..++++|
T Consensus 206 ~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K 285 (409)
T 4gni_A 206 IIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTK 285 (409)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHH
Confidence 47999999999999886 33321 122223579999999999988886431 00 1111112 2344455
Q ss_pred HhccccccchHHHHhhcccCccceeeeeC---CCCc--eEEeCCccc-cccccccCCCCCCCCCCCHHHHHHHHHHhCCH
Q 019039 215 EKLCYISYDYKREYQLGLETTILVKNYTL---PDGR--VIKVGTERF-QAPEALFTPELIDVEGDGMADMVFRCIQEMDI 288 (347)
Q Consensus 215 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~l---pdg~--~i~i~~~~~-~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~ 288 (347)
+.+... ....+.+ .+|. .+.++.+.+ .+.+.+++ .+.++|.+.+.+...
T Consensus 286 ~~ls~~----------------~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~---------~i~~~i~~~l~~~~~ 340 (409)
T 4gni_A 286 RALSRS----------------TNASFSVESLIDGLDFASTINRLRYETIARTVFE---------GFNRLVESAVKKAGL 340 (409)
T ss_dssp HHHHHS----------------SEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHH---------HHHHHHHHHHHHTTC
T ss_pred HhCCCC----------------CceEEEeecccCCcceEEEeeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC
Confidence 443210 0111111 1222 233433332 22233333 356666676665432
Q ss_pred HHHHhhhcceEEecCCCCCCChHHHHHHHHhh
Q 019039 289 DNRMMLYQHIVLSGGSTMYPGLPSRYYVELFF 320 (347)
Q Consensus 289 d~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~ 320 (347)
.....+.|+|+||+|++|++.++|++.+..
T Consensus 341 --~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~ 370 (409)
T 4gni_A 341 --DPLDVDEVIMSGGTSNTPRIAANFRYIFPE 370 (409)
T ss_dssp --CGGGCCEEEEESGGGGCHHHHHHHHHHSCT
T ss_pred --CHHHCCEEEEECCccccHHHHHHHHHHcCC
Confidence 223457899999999999999999998854
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.63 E-value=2.2e-16 Score=145.62 Aligned_cols=179 Identities=17% Similarity=0.107 Sum_probs=127.3
Q ss_pred eEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhhhh---------h----ccCCceEeccccccccCCceeeccc
Q 019039 6 VVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLM---------E----QELKDTIVGAAALDLRHQLDVSYPV 72 (347)
Q Consensus 6 ~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~---------~----~~~~~~~~g~~~~~~~~~~~~~~p~ 72 (347)
.+-||+|+.++|+-. ++ .-...+||.++........ .. + ...+.+.+|+++. +|+
T Consensus 23 ~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~-~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l 90 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWG-IGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQ 90 (346)
T ss_dssp EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC-----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCS
T ss_pred EEEEecCCcceeEEe-cC-CCEEEecceeeeccccccC-cCcceEEEEecccccccCCcEEEEcccee---------ccc
Confidence 689999999999953 33 2345789998765432110 00 0 0123566776654 799
Q ss_pred cCCeeecHHHHHHHHHHHccccc-CCCCCCCeEE--EEcCCCCCHHHHHHHHhhcccc-------------cCCCeEeee
Q 019039 73 NNGIVQNWEDMGQVWDHAFFSEL-KIDPPECKIL--LTDPPLNPAKNREKMVETMFEK-------------YNFAGVFIQ 136 (347)
Q Consensus 73 ~~g~i~~~~~l~~~~~~~~~~~l-~~~~~~~~v~--l~e~~~~~~~~r~~l~e~lfe~-------------~~~~~v~~~ 136 (347)
+.|.+.+ +..+.++.+.+.+.. ........++ ++.|......+|+.+.+.+... +++..+.++
T Consensus 91 ~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 9999988 778888888875433 1112335688 8999888777888777765432 235779999
Q ss_pred hhhhHhhhhC--C-----C-ceEEEEecCCCceEEEEee--cCeecccceeEecccHHHHHHHHHHHHhhc
Q 019039 137 IQAVLTLYAQ--G-----L-LTGLVIDSGDGVTHVVPVV--DGYSFPHLTKRMNVAGRHITSYLVDLLSRR 197 (347)
Q Consensus 137 ~~~~~a~~~~--g-----~-~tglVVDiG~~~t~v~pv~--dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 197 (347)
++|.+|++++ + . .+-+|||+|+++|+++.+. +|..+.......++||+++++.+.+.++++
T Consensus 170 ~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 170 PQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp ETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 9999999974 2 1 3459999999999999998 787666545788999999999998887654
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.60 E-value=4.8e-15 Score=146.32 Aligned_cols=196 Identities=18% Similarity=0.157 Sum_probs=121.0
Q ss_pred CCeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhCCC------ceEEEEecCCCceEEEEeecCe----
Q 019039 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL------LTGLVIDSGDGVTHVVPVVDGY---- 170 (347)
Q Consensus 101 ~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~------~tglVVDiG~~~t~v~pv~dG~---- 170 (347)
-..++++.|..++..+|+.+.+. .+..|++.+.++++|.||++++|. .+-+|+|+|+++++++.+.-+.
T Consensus 135 v~~~VITVPa~f~~~qr~a~~~A-a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 4b9q_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSC
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCC
Confidence 45789999999998888766554 588899999999999999998864 3569999999999999886433
Q ss_pred ---ecccceeEecccHHHHHHHHHHHHhhc-----CCCCCCCC-----hHHHHHHHHHhccccccchHHHHhhcccCccc
Q 019039 171 ---SFPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTIL 237 (347)
Q Consensus 171 ---~~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~ 237 (347)
.+........+||+++++.|.+.+... +.++.... -...++++|+.+.... ....
T Consensus 214 ~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~------------~~~i 281 (605)
T 4b9q_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ------------QTDV 281 (605)
T ss_dssp EEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCS------------EEEE
T ss_pred ceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCC------------CeEE
Confidence 112223356899999999998887642 22221100 0234455555443111 0000
Q ss_pred eeeeeCCC--C---ceEEeCCccc-cccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHhhhcceEEecCCCCCCChH
Q 019039 238 VKNYTLPD--G---RVIKVGTERF-QAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLP 311 (347)
Q Consensus 238 ~~~~~lpd--g---~~i~i~~~~~-~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~ 311 (347)
...+...+ | ..+.++.+.| .+.+.+|+ .+.+.+.+++..... ...-...|+|+||+|++|++.
T Consensus 282 ~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~---------~i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~ 350 (605)
T 4b9q_A 282 NLPYITADATGPKHMNIKVTRAKLESLVEDLVN---------RSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQ 350 (605)
T ss_dssp EEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHH---------HTTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHH
T ss_pred EEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHH
Confidence 11111111 1 1233433332 22233333 244455555554322 122347899999999999999
Q ss_pred HHHHHHHhh
Q 019039 312 SRYYVELFF 320 (347)
Q Consensus 312 erl~~eL~~ 320 (347)
++|++.+..
T Consensus 351 ~~l~~~fg~ 359 (605)
T 4b9q_A 351 KKVAEFFGK 359 (605)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHhcc
Confidence 999998853
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.52 E-value=3.3e-13 Score=127.20 Aligned_cols=173 Identities=13% Similarity=0.132 Sum_probs=114.8
Q ss_pred HHHHHHhhcccccCCCeEeeehhhhHhhhhCCC-----ceEEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHH
Q 019039 116 NREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL-----LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYL 190 (347)
Q Consensus 116 ~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l 190 (347)
..+.+.++ ++..|+.-..+..+|+|+++++.. ...+|||+|+++|+++.+.+|.+... ...++||+++|+.+
T Consensus 169 ~v~n~~~~-~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~~--~~i~~GG~~it~dI 245 (419)
T 4a2a_A 169 VYEMFYNF-LQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKI--SYVPVGMKHVIKDV 245 (419)
T ss_dssp HHHHHHHH-HHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEEE--EEESCCHHHHHHHH
T ss_pred HHHHHHHH-HHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEEE--EecccHHHHHHHHH
Confidence 33444443 578899999999999999998764 35799999999999999999988764 56899999999999
Q ss_pred HHHHhhcCCCCCCCChHHHHHHHHHhccccccchHHHHhhcccCccceeeeeCC--CC-ceEEeCCccc-cccccccCCC
Q 019039 191 VDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTLP--DG-RVIKVGTERF-QAPEALFTPE 266 (347)
Q Consensus 191 ~~~l~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp--dg-~~i~i~~~~~-~~~E~lF~p~ 266 (347)
...+. ...+.++++|.++.....+. .....+.+| +| ....++...+ .+.+..++
T Consensus 246 a~~l~---------~~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~ve-- 303 (419)
T 4a2a_A 246 SAVLD---------TSFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLR-- 303 (419)
T ss_dssp HHHHT---------CCHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHHH--
T ss_pred HHHHC---------CCHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHHH--
Confidence 88764 35789999998876443211 011122222 11 1233332211 22222222
Q ss_pred CCCCCCCCHHHHHHHHHHhCCH---H-HHHhhhcceEEecCCCCCCChHHHHHHHHhh
Q 019039 267 LIDVEGDGMADMVFRCIQEMDI---D-NRMMLYQHIVLSGGSTMYPGLPSRYYVELFF 320 (347)
Q Consensus 267 ~~~~~~~~l~~~i~~~i~~~~~---d-~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~ 320 (347)
.+.+.|.+.++.... + ......+.|+||||+|++||+.+.+++.+..
T Consensus 304 -------ei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~ 354 (419)
T 4a2a_A 304 -------EIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS 354 (419)
T ss_dssp -------HHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS
T ss_pred -------HHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC
Confidence 245556666655432 1 1345668899999999999999999999964
No 22
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.24 E-value=9.3e-12 Score=113.76 Aligned_cols=186 Identities=15% Similarity=0.068 Sum_probs=116.3
Q ss_pred CCCCCeEEEeCCCceEEEeec--C---CCCCCcccccceeecCcchhhh-----hhhccCCceEeccccccccCCceeec
Q 019039 1 MDNRNVVVCDNGTGYVKCGFA--G---ENFPNSVFPCVVGRPMLRYEES-----LMEQELKDTIVGAAALDLRHQLDVSY 70 (347)
Q Consensus 1 ~~~~~~vViD~Gs~~ik~G~a--g---~~~P~~~~ps~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~ 70 (347)
|+..-.|-||+|-.++|+-.. | +..-+..|||.++......... .-....+.|++|+.+...
T Consensus 4 ~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~-------- 75 (329)
T 4apw_A 4 ITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED-------- 75 (329)
T ss_dssp -CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC--------
T ss_pred ccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc--------
Confidence 444557899999999999653 2 1223457899987644321100 001234578888865321
Q ss_pred cccCCeeecHHHHHHHHHHHcccccCCC-CCCCeEEEEcCCCCC--HHHHHHHHhhccc-------------ccCCCeEe
Q 019039 71 PVNNGIVQNWEDMGQVWDHAFFSELKID-PPECKILLTDPPLNP--AKNREKMVETMFE-------------KYNFAGVF 134 (347)
Q Consensus 71 p~~~g~i~~~~~l~~~~~~~~~~~l~~~-~~~~~v~l~e~~~~~--~~~r~~l~e~lfe-------------~~~~~~v~ 134 (347)
-..... +-+....++..++...++.. ...-.+++..|...- .+.|+++.+.+-. .+.+..+.
T Consensus 76 ~~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~ 153 (329)
T 4apw_A 76 SSETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDIT 153 (329)
T ss_dssp SGGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEE
T ss_pred cccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEE
Confidence 111111 22334445555553344332 112345555554332 2245555555442 13356799
Q ss_pred eehhhhHhhhhC----CCceEEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhh
Q 019039 135 IQIQAVLTLYAQ----GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSR 196 (347)
Q Consensus 135 ~~~~~~~a~~~~----g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~ 196 (347)
+.++++.+++.. ...+.+|||+|+++|+++.+.+|.++.......++||+.+++.+.+.+++
T Consensus 154 v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 154 IKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 999999999876 23567999999999999999999988776677899999999999988876
No 23
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.22 E-value=3.7e-11 Score=110.77 Aligned_cols=191 Identities=17% Similarity=0.143 Sum_probs=118.2
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchh--hhh--h---------hccCCc-eEeccccccccCCc
Q 019039 1 MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYE--ESL--M---------EQELKD-TIVGAAALDLRHQL 66 (347)
Q Consensus 1 ~~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~--~~~--~---------~~~~~~-~~~g~~~~~~~~~~ 66 (347)
|...-.|-+|+|-.++|+ ..++ =...|||.++....... ... . ...... |++|+.+......
T Consensus 1 m~~~~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~- 76 (355)
T 3js6_A 1 MSNVYVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT- 76 (355)
T ss_dssp -CCEEEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC-
T ss_pred CCccEEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc-
Confidence 554468999999999996 4444 24789999875433210 000 0 012345 8899876432111
Q ss_pred eeeccc-cCCeeecHHHHHHHHHHHccc---ccCCCCCCCeEEEEcCCCCCHHHH-HHHHhhccc-----------ccCC
Q 019039 67 DVSYPV-NNGIVQNWEDMGQVWDHAFFS---ELKIDPPECKILLTDPPLNPAKNR-EKMVETMFE-----------KYNF 130 (347)
Q Consensus 67 ~~~~p~-~~g~i~~~~~l~~~~~~~~~~---~l~~~~~~~~v~l~e~~~~~~~~r-~~l~e~lfe-----------~~~~ 130 (347)
..+.. .+....+ +....++..++.. .+..+..+-.+++..|.......| +++.+.+.. .+.+
T Consensus 77 -~~~~~~~~~k~~~-~~~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I 154 (355)
T 3js6_A 77 -GKDTASTNDRYDI-KSFKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINV 154 (355)
T ss_dssp -CEECCCSTTGGGS-HHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEE
T ss_pred -cccccccCCcccC-HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEE
Confidence 11111 2223222 3333333333321 111111123566667766555554 466666542 2334
Q ss_pred CeEeeehhhhHhhhhCC-----------CceEEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhc
Q 019039 131 AGVFIQIQAVLTLYAQG-----------LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRR 197 (347)
Q Consensus 131 ~~v~~~~~~~~a~~~~g-----------~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 197 (347)
..+.+++++.+|+++.+ ..+-+|||+|+++|+++.+.+|.++.......++||..+++.+.+.++++
T Consensus 155 ~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 155 KGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 78999999999999875 34569999999999999998898888777789999999999999999875
No 24
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.18 E-value=1.5e-10 Score=105.34 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=68.0
Q ss_pred ccccCCCeEeeehhhhHhhhhCC-----CceEEEEecCCCceEEEEeecCee-cccceeEecccHHHHHHHHHHHHhhcC
Q 019039 125 FEKYNFAGVFIQIQAVLTLYAQG-----LLTGLVIDSGDGVTHVVPVVDGYS-FPHLTKRMNVAGRHITSYLVDLLSRRG 198 (347)
Q Consensus 125 fe~~~~~~v~~~~~~~~a~~~~g-----~~tglVVDiG~~~t~v~pv~dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~ 198 (347)
.+.+++..+.++++|++|+++.+ ..+.+|||+|+++|+++.+.+|.+ +.......++||+++++.+.+.+.+++
T Consensus 135 ~~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~ 214 (320)
T 2zgy_A 135 GDTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 214 (320)
T ss_dssp BCCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCS
T ss_pred CcEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcC
Confidence 35566788999999999998763 356799999999999999999876 443346779999999999999987653
Q ss_pred CCCCCCChHHHHHHH-HHh
Q 019039 199 YSMNRTADFETVRQI-KEK 216 (347)
Q Consensus 199 ~~~~~~~~~~~~~~i-K~~ 216 (347)
.. .+...++++ |.+
T Consensus 215 ~~----i~~~~ae~~lk~~ 229 (320)
T 2zgy_A 215 TK----GSSYLADDIIIHR 229 (320)
T ss_dssp BG----GGHHHHHHHHHTT
T ss_pred CC----CCHHHHHHHHHHh
Confidence 22 345567766 544
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.51 E-value=2.4e-07 Score=87.34 Aligned_cols=74 Identities=16% Similarity=0.097 Sum_probs=59.9
Q ss_pred hhhhHhhhhCC----C-ceEEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCCCCChHHHHH
Q 019039 137 IQAVLTLYAQG----L-LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVR 211 (347)
Q Consensus 137 ~~~~~a~~~~g----~-~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 211 (347)
-+|.+|.+++= + .-.++||+|+++|++.-+.+|..+.. ..++.||+++|+.+..-|.-. +...+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a--~~ip~gG~~VT~DIA~~Lgt~--------d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIA--THLAGAGDMVTMIIARELGLE--------DRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEE--EEEECSHHHHHHHHHHHHTCC--------CHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhCCC--------CHHHHH
Confidence 67777777763 2 34689999999999999999987775 458999999999999988632 589999
Q ss_pred HHHHhccccc
Q 019039 212 QIKEKLCYIS 221 (347)
Q Consensus 212 ~iK~~~~~v~ 221 (347)
+||. +..+.
T Consensus 460 rIK~-YG~A~ 468 (610)
T 2d0o_A 460 EIKK-YPLAK 468 (610)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9998 66544
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.46 E-value=4.3e-07 Score=85.93 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=59.5
Q ss_pred hhhhHhhhhCC----C-ceEEEEecCCCceEEEEeecCeecccceeEecccHHHHHHHHHHHHhhcCCCCCCCChHHHHH
Q 019039 137 IQAVLTLYAQG----L-LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVR 211 (347)
Q Consensus 137 ~~~~~a~~~~g----~-~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 211 (347)
-+|.+|.+++= + .-..+||+|+++|++.-+.+|..+.. ..++.||+++|+.+..-|.-. +...+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a--~~ip~gG~~VT~DIA~~Lg~~--------d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITA--VHLAGAGNMVSLLIKTELGLE--------DLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEE--EEEECCHHHHHHHHHHHHTCS--------CHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhCCC--------CHHHHH
Confidence 56777777663 2 34689999999999999999987775 458999999999999988632 589999
Q ss_pred HHHHhccccc
Q 019039 212 QIKEKLCYIS 221 (347)
Q Consensus 212 ~iK~~~~~v~ 221 (347)
+||. +..+.
T Consensus 462 rIK~-YG~A~ 470 (607)
T 1nbw_A 462 AIKK-YPLAK 470 (607)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9998 66543
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.93 E-value=0.02 Score=50.19 Aligned_cols=64 Identities=9% Similarity=0.069 Sum_probs=42.6
Q ss_pred eEeeehhhhHhhhhCC---CceEEEEecCCCceEEEEe-ecCeecc-cceeEecccHHHHHHHHHHHHh
Q 019039 132 GVFIQIQAVLTLYAQG---LLTGLVIDSGDGVTHVVPV-VDGYSFP-HLTKRMNVAGRHITSYLVDLLS 195 (347)
Q Consensus 132 ~v~~~~~~~~a~~~~g---~~tglVVDiG~~~t~v~pv-~dG~~~~-~~~~~~~~GG~~l~~~l~~~l~ 195 (347)
.+..++++.++++++. .....|+|+|++.+.++-+ .+|.... ..-..+..|+.++.+.+.+.|.
T Consensus 73 ~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~ 141 (276)
T 4ehu_A 73 ADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKIIE 141 (276)
T ss_dssp CSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHHT
T ss_pred CCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHhc
Confidence 3567788888887763 3455899999999988877 4454332 1123466777777777766664
No 28
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.14 E-value=0.014 Score=52.25 Aligned_cols=74 Identities=16% Similarity=0.090 Sum_probs=51.0
Q ss_pred HHHHHHHhhcccccCCCeEeeeh---hhhHhhh----hCC-CceEEEEecCCCceEEEEeecCeecccceeEecccHHHH
Q 019039 115 KNREKMVETMFEKYNFAGVFIQI---QAVLTLY----AQG-LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186 (347)
Q Consensus 115 ~~r~~l~e~lfe~~~~~~v~~~~---~~~~a~~----~~g-~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l 186 (347)
..++.+++.+-+..|++ +-+++ ++.++.. +.+ ..+++|||+|+++|.++-..++.+.. ...+++|+..+
T Consensus 97 ~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~~G~v~l 173 (315)
T 1t6c_A 97 KNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVRE--VISLPIGIVNL 173 (315)
T ss_dssp TTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEEE--EEEECCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCceee--EEEEeccHHHH
Confidence 34566666666667765 33333 2222221 223 56799999999999999998887654 45799999999
Q ss_pred HHHHH
Q 019039 187 TSYLV 191 (347)
Q Consensus 187 ~~~l~ 191 (347)
++.+.
T Consensus 174 ~e~~~ 178 (315)
T 1t6c_A 174 TETFF 178 (315)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88763
No 29
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.35 E-value=0.017 Score=51.85 Aligned_cols=73 Identities=14% Similarity=0.207 Sum_probs=48.4
Q ss_pred HHHHHHhhcccccCCCeEee--ehhhhHhh------hhCCCceEEEEecCCCceEEEEeecCeecccceeEecccHHHHH
Q 019039 116 NREKMVETMFEKYNFAGVFI--QIQAVLTL------YAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHIT 187 (347)
Q Consensus 116 ~r~~l~e~lfe~~~~~~v~~--~~~~~~a~------~~~g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~ 187 (347)
.++.+++.+-+.+|++-=.+ -.++-++. +......++|+|+|+++|.++-+.++.+.. ...+++|.-.++
T Consensus 90 N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl~ 167 (315)
T 3mdq_A 90 NKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQRLI 167 (315)
T ss_dssp THHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEee--eEEEechhhHHH
Confidence 44556666666677652222 22333222 222236799999999999999999887665 357899998888
Q ss_pred HHH
Q 019039 188 SYL 190 (347)
Q Consensus 188 ~~l 190 (347)
+.+
T Consensus 168 e~f 170 (315)
T 3mdq_A 168 DRF 170 (315)
T ss_dssp HHS
T ss_pred HHh
Confidence 765
No 30
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.08 E-value=0.12 Score=49.40 Aligned_cols=73 Identities=18% Similarity=0.081 Sum_probs=49.4
Q ss_pred HHHHHHHhhcccccCCCeEeeeh---hhhHhhhh----CC-CceEEEEecCCCceEEEEeecCeecccceeEecccHHHH
Q 019039 115 KNREKMVETMFEKYNFAGVFIQI---QAVLTLYA----QG-LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186 (347)
Q Consensus 115 ~~r~~l~e~lfe~~~~~~v~~~~---~~~~a~~~----~g-~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l 186 (347)
..++.+++.+-+..|++- -+++ ++-++..+ .. ...++|+|+|+++|.++-..++.+.. ...+++|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPIL--VESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEEE--EEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeeeE--EEEEeccHHHH
Confidence 344567777777777753 3333 23333222 12 22799999999999999888887654 35789999988
Q ss_pred HHHH
Q 019039 187 TSYL 190 (347)
Q Consensus 187 ~~~l 190 (347)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8766
No 31
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=94.94 E-value=0.13 Score=49.17 Aligned_cols=72 Identities=13% Similarity=0.122 Sum_probs=48.4
Q ss_pred HHHHHHHhhcccccCCCeEeee---hhhhHhhh----hCCCceEEEEecCCCceEEEEeecCeecccceeEecccHHHHH
Q 019039 115 KNREKMVETMFEKYNFAGVFIQ---IQAVLTLY----AQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHIT 187 (347)
Q Consensus 115 ~~r~~l~e~lfe~~~~~~v~~~---~~~~~a~~----~~g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~ 187 (347)
..++.+++.+-+.+|++- -++ .++-+... +.....++|||+|+++|.++-+.+|.+... ..+++|.-.++
T Consensus 100 ~N~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~~~--~Sl~lG~vrl~ 176 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCGEG--ITLPLGGLRLS 176 (508)
T ss_dssp TTHHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEECCC--EEESCCHHHHH
T ss_pred cCHHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeeeeE--EEecceEEehh
Confidence 344566666666677652 233 23333322 223457899999999999999999887653 57899998877
Q ss_pred HH
Q 019039 188 SY 189 (347)
Q Consensus 188 ~~ 189 (347)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 32
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=94.29 E-value=0.56 Score=40.75 Aligned_cols=26 Identities=19% Similarity=0.254 Sum_probs=23.2
Q ss_pred hcceEEecCCCCCCChHHHHHHHHhh
Q 019039 295 YQHIVLSGGSTMYPGLPSRYYVELFF 320 (347)
Q Consensus 295 ~~nIvl~GG~s~i~G~~erl~~eL~~ 320 (347)
.+.|+++||.++.+++.+.+.+.|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~ 234 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV 234 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC
Confidence 36799999999999999999999864
No 33
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=94.07 E-value=1.1 Score=39.13 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=41.9
Q ss_pred HHHhhcccccCCCeEeeehhhhHhhhhC-----CCceEEEEecCCCceEEEEeecCeeccc
Q 019039 119 KMVETMFEKYNFAGVFIQIQAVLTLYAQ-----GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 119 ~l~e~lfe~~~~~~v~~~~~~~~a~~~~-----g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
.+.+.+ +.+++| +++.++.-+++++- +..+.++|-+|.+ .-..-|.+|++...
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 456667 888988 88999999998873 6678999999987 45666789987754
No 34
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=92.89 E-value=1.7 Score=38.65 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=38.6
Q ss_pred hhcccccCCCeEeeehhhhHhhhh-------CCCceEEEEecCCCceEEEEeecCeeccc
Q 019039 122 ETMFEKYNFAGVFIQIQAVLTLYA-------QGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 122 e~lfe~~~~~~v~~~~~~~~a~~~-------~g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
+.+-+.+++| +++.+++-+++++ .+..+.++|-+|.+ .-..-|.+|.++..
T Consensus 90 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 147 (321)
T 3vgl_A 90 DKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRRG 147 (321)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEecC
Confidence 3344456887 8899999988875 34678999999988 56677789988763
No 35
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=92.86 E-value=0.63 Score=40.36 Aligned_cols=18 Identities=17% Similarity=0.266 Sum_probs=16.2
Q ss_pred eEEEeCCCceEEEeecCC
Q 019039 6 VVVCDNGTGYVKCGFAGE 23 (347)
Q Consensus 6 ~vViD~Gs~~ik~G~ag~ 23 (347)
.++||+|.++||+|+..+
T Consensus 4 lL~IDIGNT~iK~gl~d~ 21 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDG 21 (266)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECCCeEEEEEEEC
Confidence 799999999999998754
No 36
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=92.86 E-value=2.3 Score=37.91 Aligned_cols=52 Identities=15% Similarity=0.040 Sum_probs=38.1
Q ss_pred HhhcccccCCCeEeeehhhhHhhhhC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 019039 121 VETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 121 ~e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
.+.+-+.|++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 113 ~~~l~~~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 171 (327)
T 4db3_A 113 RADLEAKIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIYEGKVFSG 171 (327)
T ss_dssp HHHHHHHHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEECCEEeec
Confidence 33444566888 88999999887752 4578899999987 45666779987754
No 37
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=91.85 E-value=0.11 Score=46.48 Aligned_cols=25 Identities=24% Similarity=0.567 Sum_probs=23.6
Q ss_pred ceEEEEecCCCceEEEEeecCeecc
Q 019039 149 LTGLVIDSGDGVTHVVPVVDGYSFP 173 (347)
Q Consensus 149 ~tglVVDiG~~~t~v~pv~dG~~~~ 173 (347)
.++++||||+.+|+|+|+.+|+++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999977
No 38
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=91.35 E-value=0.61 Score=40.49 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=15.5
Q ss_pred eEEEeCCCceEEEeecCC
Q 019039 6 VVVCDNGTGYVKCGFAGE 23 (347)
Q Consensus 6 ~vViD~Gs~~ik~G~ag~ 23 (347)
.++||+|.+++|.|+..+
T Consensus 2 lL~IDIGNT~ik~gl~~~ 19 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE 19 (268)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECcCcEEEEEEEC
Confidence 478999999999998744
No 39
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=90.62 E-value=8.2 Score=33.74 Aligned_cols=51 Identities=20% Similarity=0.196 Sum_probs=36.7
Q ss_pred hhcccccCCCeEeeehhhhHhhhhC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 019039 122 ETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 122 e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
+.+-+.+++| +++.+++-+++++- +..+.++|-+|.+. -..-|.+|+++..
T Consensus 92 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~~g~l~~G 149 (302)
T 3vov_A 92 RILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTGI-GGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EEEEEETTEECCC
T ss_pred HHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCce-eEEEEECCEEeeC
Confidence 3344556787 78999988887642 46788999999874 4556679987754
No 40
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=88.51 E-value=1.6 Score=37.43 Aligned_cols=18 Identities=11% Similarity=0.172 Sum_probs=15.9
Q ss_pred eEEEeCCCceEEEeecCC
Q 019039 6 VVVCDNGTGYVKCGFAGE 23 (347)
Q Consensus 6 ~vViD~Gs~~ik~G~ag~ 23 (347)
.++||+|.+++|.|+..+
T Consensus 5 ~L~IDIGNT~ik~gl~~~ 22 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITED 22 (249)
T ss_dssp EEEEEECSSEEEEEEESS
T ss_pred EEEEEECCCeEEEEEEEC
Confidence 689999999999998754
No 41
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=88.41 E-value=4.6 Score=35.36 Aligned_cols=89 Identities=17% Similarity=0.225 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHcccccCCCCCC---CeEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhh-CCCceEEEEe
Q 019039 80 WEDMGQVWDHAFFSELKIDPPE---CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA-QGLLTGLVID 155 (347)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~---~~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~-~g~~tglVVD 155 (347)
|+.+.+.++.++ +..+.+..+ ..+-+..|-.........+ +..|.. ++ -+++.++.-+++++ .+..++++|-
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~l-~~~~~~-~~-pv~v~NDa~aaa~ge~~~~~~v~v~ 128 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGEF-ESQAPG-FA-RLSLATDGYTTLLGAHGGQPGIIVA 128 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHHH-HHTCCC-CS-EEEEECHHHHHHHHHTTTSSEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHHH-HHhCCC-Cc-eEEEECCHHHHHHhhcCCCCeEEEE
Confidence 455666666666 344444333 2456666654433322222 222221 34 48899999999987 4667899999
Q ss_pred cCCCceEEEEeecCeec
Q 019039 156 SGDGVTHVVPVVDGYSF 172 (347)
Q Consensus 156 iG~~~t~v~pv~dG~~~ 172 (347)
+|.+..-..-+.+|...
T Consensus 129 ~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 129 LGTGSIGEALYPDGSHR 145 (305)
T ss_dssp ESSSEEEEEECTTSCEE
T ss_pred ecCCeEEEEEeCCCcEE
Confidence 99886433333388754
No 42
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=87.17 E-value=3.4 Score=36.09 Aligned_cols=47 Identities=11% Similarity=-0.019 Sum_probs=31.8
Q ss_pred hcceEEecC-CCCCCChHHHHHHHHhhcCCCCCeeeeecCCcccccccccccc
Q 019039 295 YQHIVLSGG-STMYPGLPSRYYVELFFASHDIPLCFLRNLGLHVYSLFLSVFV 346 (347)
Q Consensus 295 ~~nIvl~GG-~s~i~G~~erl~~eL~~~~~~~~~~~~~~~~~~~~s~w~G~~~ 346 (347)
.++|+++|| .+..|++.++|++.+... +.++.+ +..+.|..-+||.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~--~~~~~~---p~~~~~~gAlGAaL 284 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLR--GCKPYY---VENGAFSGAIGALY 284 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHT--TCEEEE---CTTGGGHHHHHHHH
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhC--CceEEE---CCCccHHHHHHHHH
Confidence 357999999 999999999999876542 222222 33455666666643
No 43
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=86.62 E-value=0.73 Score=41.56 Aligned_cols=74 Identities=22% Similarity=0.169 Sum_probs=47.6
Q ss_pred HHHHHHhhcccccCCCeEeeeh---hhhHhhhhC----C----CceEEEEecCCCceEEEEeec--Ceec--ccceeEec
Q 019039 116 NREKMVETMFEKYNFAGVFIQI---QAVLTLYAQ----G----LLTGLVIDSGDGVTHVVPVVD--GYSF--PHLTKRMN 180 (347)
Q Consensus 116 ~r~~l~e~lfe~~~~~~v~~~~---~~~~a~~~~----g----~~tglVVDiG~~~t~v~pv~d--G~~~--~~~~~~~~ 180 (347)
.++.+++.+-+.+|++ +-+++ ++.++..+. . ...++|+|+|+++|.++-+.+ +.+. ......++
T Consensus 103 N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Slp 181 (343)
T 3cer_A 103 NREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMN 181 (343)
T ss_dssp THHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEES
T ss_pred CHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEEe
Confidence 3456666666666664 22332 343333332 2 256999999999999998877 4331 11346799
Q ss_pred ccHHHHHHHH
Q 019039 181 VAGRHITSYL 190 (347)
Q Consensus 181 ~GG~~l~~~l 190 (347)
+|+..+++.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9999999876
No 44
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=85.81 E-value=4.9 Score=35.51 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=37.4
Q ss_pred ccccc-CCCeEeeehhhhHhhhh-------CCCceEEEEecCCCceEEEEeecCeeccc
Q 019039 124 MFEKY-NFAGVFIQIQAVLTLYA-------QGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 124 lfe~~-~~~~v~~~~~~~~a~~~-------~g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
+-+.+ ++| +++.+++-+++++ .+..+.++|-+|.+ .-..-|.+|.++..
T Consensus 113 l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~G 169 (321)
T 3r8e_A 113 LRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFIG 169 (321)
T ss_dssp HHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEecC
Confidence 33456 776 8899999888765 25678999999988 56677789988764
No 45
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=83.25 E-value=9.2 Score=33.94 Aligned_cols=90 Identities=17% Similarity=0.177 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHcccccCCCCC--CCeEEEEcCCCCCHHHHHHHHhhcccccC---CCeEeeehhhhHhhhhCCCceEEEE
Q 019039 80 WEDMGQVWDHAFFSELKIDPP--ECKILLTDPPLNPAKNREKMVETMFEKYN---FAGVFIQIQAVLTLYAQGLLTGLVI 154 (347)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~--~~~v~l~e~~~~~~~~r~~l~e~lfe~~~---~~~v~~~~~~~~a~~~~g~~tglVV 154 (347)
|+.+.+.++.++ +..+.++. -..+-+..|-....+....+.+.+=+.++ .| +++.++.-+++++....++++|
T Consensus 49 ~~~i~~~i~~~~-~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~v~v 126 (347)
T 2ch5_A 49 VERINEMVNRAK-RKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGGVVL 126 (347)
T ss_dssp HHHHHHHHHHHH-HHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHH-HhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCcEEE
Confidence 455666666665 33333332 24567777766655544455555555665 44 7899999998888534678888
Q ss_pred ecCCCceEEEEeecCee
Q 019039 155 DSGDGVTHVVPVVDGYS 171 (347)
Q Consensus 155 DiG~~~t~v~pv~dG~~ 171 (347)
-+|.+.-...-..+|..
T Consensus 127 ~~GTGig~~~v~~~G~~ 143 (347)
T 2ch5_A 127 ISGTGSNCRLINPDGSE 143 (347)
T ss_dssp EESSSEEEEEECTTSCE
T ss_pred EEcCCceeEEEcCCCCE
Confidence 88887643322235543
No 46
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=81.76 E-value=10 Score=32.87 Aligned_cols=61 Identities=26% Similarity=0.317 Sum_probs=39.9
Q ss_pred eEEEEcCCCCCHHHHHHHHhhcccccCCCeEeeehhhhHhhhhC-CCceEEEEecCCCceEEEEeecCe
Q 019039 103 KILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQ-GLLTGLVIDSGDGVTHVVPVVDGY 170 (347)
Q Consensus 103 ~v~l~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~-g~~tglVVDiG~~~t~v~pv~dG~ 170 (347)
.+-+..|-..+......+.+.+=+ +++| +++.++.-+++++. ...++++|-+|.+. |.+|+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~~GTG~-----i~~g~ 123 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVIAGTGS-----VVEGY 123 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEEESSSE-----EEEEE
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEEecCCE-----EEEEE
Confidence 566666655443333345555444 6754 77889988888864 35788999999983 45565
No 47
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=81.62 E-value=6.4 Score=35.52 Aligned_cols=68 Identities=12% Similarity=-0.023 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCH-HHHHhhhcceEEecC-CCCCCChHHHHHHHHhhcC-CCCCeeeeecCCccccccccccc
Q 019039 275 MADMVFRCIQEMDI-DNRMMLYQHIVLSGG-STMYPGLPSRYYVELFFAS-HDIPLCFLRNLGLHVYSLFLSVF 345 (347)
Q Consensus 275 l~~~i~~~i~~~~~-d~r~~l~~nIvl~GG-~s~i~G~~erl~~eL~~~~-~~~~~~~~~~~~~~~~s~w~G~~ 345 (347)
|..+|.+.|..+-. --++.-.++|+++|| .+..|++.+.|++.|.--. -+.++.+.+ .+.|..-+||.
T Consensus 285 ll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~---~~~y~GAlGAa 355 (360)
T 2i7n_A 285 TLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLE---HEGYFGAVGAL 355 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEET---TTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcC---CccHHHHHHHH
Confidence 44444444433211 113444468999999 9999999999999986321 123333322 35566666654
No 48
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=81.50 E-value=11 Score=32.66 Aligned_cols=70 Identities=9% Similarity=-0.028 Sum_probs=47.6
Q ss_pred eEEEEcCCCCCHHHHHHHHhhcccccCC-CeEeeehhhhHhhhh-CCCceEEEEecCCCceEEEEeecCeecc
Q 019039 103 KILLTDPPLNPAKNREKMVETMFEKYNF-AGVFIQIQAVLTLYA-QGLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (347)
Q Consensus 103 ~v~l~e~~~~~~~~r~~l~e~lfe~~~~-~~v~~~~~~~~a~~~-~g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (347)
.+-+..|-.. ++....+.+.+-+.+++ ..+.+.+++-+++++ .+..+++++=+|.+.--..-+.+|+...
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~~ 133 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKAN 133 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEEE
Confidence 4566566544 23233455555556665 358999999999998 5788899998998875445556888753
No 49
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=81.27 E-value=3.4 Score=36.49 Aligned_cols=49 Identities=12% Similarity=0.054 Sum_probs=37.3
Q ss_pred cccccCCCeEeeehhhhHhhhh-------CCCceEEEEecCCCceEEEEeecCeeccc
Q 019039 124 MFEKYNFAGVFIQIQAVLTLYA-------QGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 124 lfe~~~~~~v~~~~~~~~a~~~-------~g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
+=+.+++| +++.++.-+++++ .+..+.++|-+|.+ +-..-+.+|..+..
T Consensus 104 l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 104 IESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp HHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEeec
Confidence 33446777 8899999998875 25678999999998 56777789987763
No 50
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=70.23 E-value=9.6 Score=33.86 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=35.4
Q ss_pred cccCCCeEeeehhhhHhhhhC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 019039 126 EKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 126 e~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
+.+++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.....
T Consensus 129 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~G 182 (343)
T 2yhw_A 129 DTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIHG 182 (343)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEecC
Confidence 345777 88899998887752 4578999999987 45667789987653
No 51
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=67.53 E-value=3.8 Score=36.98 Aligned_cols=101 Identities=11% Similarity=0.049 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcccccCCCCCCCeEEEEcCCC---CCHHHHHHHHhhccccc-------CCCeEeeehh---hhH----h
Q 019039 80 WEDMGQVWDHAFFSELKIDPPECKILLTDPPL---NPAKNREKMVETMFEKY-------NFAGVFIQIQ---AVL----T 142 (347)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~~~v~l~e~~~---~~~~~r~~l~e~lfe~~-------~~~~v~~~~~---~~~----a 142 (347)
.+.+++.++ -|.+ + ..-...++.+.-... .+.+.++.+++.+-+.+ +. .+.+++. +.+ +
T Consensus 52 ~~~~~~~l~-~f~~-~-~~~~~~~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~-~v~VIsG~eEa~~~~~gv 127 (353)
T 3aap_A 52 SVTIDAYLT-MLLA-D-APIHNIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLV-EAKTITGNDEALFDWLAV 127 (353)
T ss_dssp HHHHHHHHH-HHHT-T-CSCCSEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEE-EEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHH-H-HhcCCCcEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCC-eEEECChHHHHHHHHHHH
Confidence 455666666 3323 1 112233444443221 23444666666665554 32 3444442 222 2
Q ss_pred hhhCC------CceEEEEecCCCceEEEEeec--CeecccceeEecccHH
Q 019039 143 LYAQG------LLTGLVIDSGDGVTHVVPVVD--GYSFPHLTKRMNVAGR 184 (347)
Q Consensus 143 ~~~~g------~~tglVVDiG~~~t~v~pv~d--G~~~~~~~~~~~~GG~ 184 (347)
.|..+ ..+.+|+|+|+++|.++-..+ +.+..+....+++||.
T Consensus 128 ~~~l~~~~~~~~~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 128 NYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp HHHTTCSSSCCSSCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred HHHhhhccccccccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 33333 246999999999999987744 3333333456777764
No 52
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=67.17 E-value=51 Score=28.41 Aligned_cols=50 Identities=20% Similarity=0.110 Sum_probs=36.8
Q ss_pred hcccccCCCeEeeehhhhHhhhhC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 019039 123 TMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 123 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
.+-+.+++| +++.+++-+++++- +..+.++|-+|.+. -..-|.+|+++..
T Consensus 92 ~l~~~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~giv~~G~l~~G 148 (297)
T 4htl_A 92 WLEAETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGI-GGGIFSNGELVRG 148 (297)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEETTEECCC
T ss_pred HHHHHHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcce-EEEEEECCEEEec
Confidence 333456888 88999988887642 46788999999874 5566779988763
No 53
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=62.81 E-value=29 Score=30.41 Aligned_cols=49 Identities=12% Similarity=0.030 Sum_probs=36.5
Q ss_pred cccccCCCeEeeehhhhHhhhh---C----CCceEEEEecCCCceEEEEeecCeeccc
Q 019039 124 MFEKYNFAGVFIQIQAVLTLYA---Q----GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 124 lfe~~~~~~v~~~~~~~~a~~~---~----g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
+-+.+++| +++.+++-+++++ . +..+.++|-+|.+ .-..-|.+|.....
T Consensus 116 l~~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 171 (327)
T 2ap1_A 116 LSARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPITG 171 (327)
T ss_dssp HHHHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 33446777 8899999998875 2 3578899999987 45666789987764
No 54
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=61.72 E-value=22 Score=30.61 Aligned_cols=17 Identities=18% Similarity=0.290 Sum_probs=15.3
Q ss_pred eEEEeCCCceEEEeecC
Q 019039 6 VVVCDNGTGYVKCGFAG 22 (347)
Q Consensus 6 ~vViD~Gs~~ik~G~ag 22 (347)
.++||+|-+++|.|+..
T Consensus 25 ~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEEe
Confidence 59999999999999864
No 55
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=60.33 E-value=39 Score=30.50 Aligned_cols=27 Identities=26% Similarity=0.290 Sum_probs=22.0
Q ss_pred cceEEecCCCCCCC-hHHHHHHHHhhcC
Q 019039 296 QHIVLSGGSTMYPG-LPSRYYVELFFAS 322 (347)
Q Consensus 296 ~nIvl~GG~s~i~G-~~erl~~eL~~~~ 322 (347)
+.|||+||.+...- |.+++++.+....
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~ 324 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA 324 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc
Confidence 45999999887655 8999999998764
No 56
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=59.23 E-value=22 Score=32.64 Aligned_cols=51 Identities=16% Similarity=0.218 Sum_probs=37.7
Q ss_pred hhcccccCCCeEeeehhhhHhhhhC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 019039 122 ETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 122 e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
+.+-+.+++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.+...
T Consensus 202 ~~L~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 259 (429)
T 1z05_A 202 PEIYKATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIVLDGRVLQG 259 (429)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCT
T ss_pred HHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEEECCEEeeC
Confidence 3333456787 88999999888752 4578999999987 45667789987654
No 57
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=57.68 E-value=42 Score=30.17 Aligned_cols=51 Identities=20% Similarity=0.213 Sum_probs=37.3
Q ss_pred hhcccccCCCeEeeehhhhHhhhh-----CCCceEEEEecCCCceEEEEeecCeeccc
Q 019039 122 ETMFEKYNFAGVFIQIQAVLTLYA-----QGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 122 e~lfe~~~~~~v~~~~~~~~a~~~-----~g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
+.+=+.+++| +++.+++-+++++ .+..+.++|-+|.+ .-..-|.+|..+..
T Consensus 182 ~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (380)
T 2hoe_A 182 NLLKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYRG 237 (380)
T ss_dssp HHHHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECCC
T ss_pred HHHHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEecc
Confidence 3333456776 8899999888775 23388999999987 45667789987764
No 58
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=46.61 E-value=15 Score=31.76 Aligned_cols=55 Identities=7% Similarity=0.016 Sum_probs=38.8
Q ss_pred HHHhhcccccCC-CeEeeehhhhHhhhhC-CCceEEEEecCCCceEEEEeecCeecc
Q 019039 119 KMVETMFEKYNF-AGVFIQIQAVLTLYAQ-GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (347)
Q Consensus 119 ~l~e~lfe~~~~-~~v~~~~~~~~a~~~~-g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (347)
.+.+.+=+.++. ..+.+.+++-+++++- |..++++|=+|.+..-..-+.+|+...
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~~ 131 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVSN 131 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEEE
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEEE
Confidence 444444445664 2489999999999964 778889888998874444556887754
No 59
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=44.98 E-value=6.6 Score=35.55 Aligned_cols=23 Identities=17% Similarity=0.431 Sum_probs=20.8
Q ss_pred cceEEecCCCCCCChHHHHHHHH
Q 019039 296 QHIVLSGGSTMYPGLPSRYYVEL 318 (347)
Q Consensus 296 ~nIvl~GG~s~i~G~~erl~~eL 318 (347)
..|++|||++.-|-+.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 56999999999999999998877
No 60
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=42.25 E-value=15 Score=34.97 Aligned_cols=24 Identities=21% Similarity=0.201 Sum_probs=19.6
Q ss_pred CCCCCeEEEeCCCceEEEeecCCC
Q 019039 1 MDNRNVVVCDNGTGYVKCGFAGEN 24 (347)
Q Consensus 1 ~~~~~~vViD~Gs~~ik~G~ag~~ 24 (347)
||.+-.+.||+|+.++|++...++
T Consensus 23 MM~~~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 23 MMGGYILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp CCSCEEEEEEECSSEEEEEEECTT
T ss_pred HhhCeEEEEEeCCcceEEEEECCC
Confidence 665567889999999999987554
No 61
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=36.37 E-value=12 Score=33.80 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=20.7
Q ss_pred cceEEecCCCCCCChHHHHHHHH
Q 019039 296 QHIVLSGGSTMYPGLPSRYYVEL 318 (347)
Q Consensus 296 ~nIvl~GG~s~i~G~~erl~~eL 318 (347)
..|++|||++.-|-+.+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999998877
No 62
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=35.58 E-value=2.4e+02 Score=25.13 Aligned_cols=130 Identities=19% Similarity=0.117 Sum_probs=0.0
Q ss_pred CC----CCCeEEEeCCCceEEEeecCCCCCCcccccceeecCcchhhhhhhccCCceEeccccccccCCcee-eccccCC
Q 019039 1 MD----NRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDV-SYPVNNG 75 (347)
Q Consensus 1 ~~----~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~p~~~g 75 (347)
|| ..-.+.+|+|..+++++... ..-... .. ..|....
T Consensus 2 ~~~n~d~~~~lgiDIGgt~i~~~l~d-~G~il~-------------------------------------~~~~~~~~~~ 43 (366)
T 3mcp_A 2 MMYTNDNRIVMTLDAGGTNFVFSAIQ-GGKEIA-------------------------------------DPVVLPACAD 43 (366)
T ss_dssp CTTTTCCCEEEEEECSSSEEEEEEEE-TTEECS-------------------------------------CCEEEECCTT
T ss_pred ccCCCCCCEEEEEEECcceEEEEEEE-CCEEEE-------------------------------------EEEEEECCCC
Q ss_pred eeecHHHHHHHHHH---HcccccCCCCCCCeEEEEcC------------CCCCHHHH--HHHHhhcccccCCCeEeeehh
Q 019039 76 IVQNWEDMGQVWDH---AFFSELKIDPPECKILLTDP------------PLNPAKNR--EKMVETMFEKYNFAGVFIQIQ 138 (347)
Q Consensus 76 ~i~~~~~l~~~~~~---~~~~~l~~~~~~~~v~l~e~------------~~~~~~~r--~~l~e~lfe~~~~~~v~~~~~ 138 (347)
+.+.+-+.+.. .+.+.+. .+-..+-+..| .-+-+.++ -.+.+.+-+.|++| |++.++
T Consensus 44 ---~~~~~l~~i~~~~~~i~~~~~--~~i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~P-V~veND 117 (366)
T 3mcp_A 44 ---CLDKCLGNLVEGFKAIQAGLP--EAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIP-VFINND 117 (366)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCS--SCCCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSC-EEEECH
T ss_pred ---CHHHHHHHHHHHHHHHHHHhh--cCCeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCC-EEEech
Q ss_pred hhHhhhh--------------------CCCceEEEEecCCCceEEEEeecCeecccc
Q 019039 139 AVLTLYA--------------------QGLLTGLVIDSGDGVTHVVPVVDGYSFPHL 175 (347)
Q Consensus 139 ~~~a~~~--------------------~g~~tglVVDiG~~~t~v~pv~dG~~~~~~ 175 (347)
+-+++++ .+..+.++|-+|.+- -..-|.+|.++...
T Consensus 118 anaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtGI-G~givi~G~l~~G~ 173 (366)
T 3mcp_A 118 GSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGF-GAGVVIDGELLRGD 173 (366)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSSE-EEEEEETTEECCCT
T ss_pred hhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCcc-eEEEEECCEEecCC
No 63
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=33.81 E-value=16 Score=32.61 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=23.3
Q ss_pred hcceEEecCCCCCCChHHHHHHHHhh
Q 019039 295 YQHIVLSGGSTMYPGLPSRYYVELFF 320 (347)
Q Consensus 295 ~~nIvl~GG~s~i~G~~erl~~eL~~ 320 (347)
.++|+|+||.+.-..+.++|.+++..
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~ 275 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMARE 275 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999864
No 64
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=32.68 E-value=40 Score=31.41 Aligned_cols=22 Identities=18% Similarity=-0.011 Sum_probs=18.5
Q ss_pred ceEEEEecCCCceEEEEeecCe
Q 019039 149 LTGLVIDSGDGVTHVVPVVDGY 170 (347)
Q Consensus 149 ~tglVVDiG~~~t~v~pv~dG~ 170 (347)
.+..|+|+|+++|.++-..+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4679999999999999886664
No 65
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=30.75 E-value=76 Score=26.92 Aligned_cols=51 Identities=16% Similarity=0.024 Sum_probs=37.6
Q ss_pred HhhcccccCCCeEeeehhhhHhhhhC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 019039 121 VETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (347)
Q Consensus 121 ~e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (347)
.+.+=+.+++| +++.++.-+++++- +. +.++|.+|.+ .-..-+.+|+.+..
T Consensus 89 ~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~G 146 (289)
T 2aa4_A 89 VKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLTG 146 (289)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEeeC
Confidence 33444456777 88999998888752 34 8999999988 56677789987753
No 66
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=29.49 E-value=22 Score=31.43 Aligned_cols=26 Identities=19% Similarity=0.114 Sum_probs=23.3
Q ss_pred hcceEEecCCCCCCChHHHHHHHHhh
Q 019039 295 YQHIVLSGGSTMYPGLPSRYYVELFF 320 (347)
Q Consensus 295 ~~nIvl~GG~s~i~G~~erl~~eL~~ 320 (347)
.++|+++||.+.-..+.++|.+.+..
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~ 270 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTED 270 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999998864
No 67
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=27.47 E-value=25 Score=33.21 Aligned_cols=36 Identities=6% Similarity=-0.044 Sum_probs=24.6
Q ss_pred CCCeEeeehhhhHhhhhCCC--ceEEEEecCCCceEEE
Q 019039 129 NFAGVFIQIQAVLTLYAQGL--LTGLVIDSGDGVTHVV 164 (347)
Q Consensus 129 ~~~~v~~~~~~~~a~~~~g~--~tglVVDiG~~~t~v~ 164 (347)
++|-+.-.-+..+++++.|. ..-+++-+|.+.+..+
T Consensus 230 g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~ 267 (504)
T 3ll3_A 230 DTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRT 267 (504)
T ss_dssp TCEEEEEEEHHHHHHHTTTCCSTTEEEEEESSSEEEEE
T ss_pred CCCEEEEccHHHHHHHhCCCCCCCcEEEEechhhhhee
Confidence 45666666778888898885 3456777777765443
No 68
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=27.32 E-value=36 Score=33.16 Aligned_cols=44 Identities=11% Similarity=0.128 Sum_probs=37.7
Q ss_pred HHHHHHHHHHcccccCCCCCCCeEEEEcCCCCCHHHHHHHHhhcccccCC
Q 019039 81 EDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNF 130 (347)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~~~v~l~e~~~~~~~~r~~l~e~lfe~~~~ 130 (347)
+.++.|-+|+| ..++.||||+--..++.++++++++++-|.||=
T Consensus 236 ~v~~~I~~~AF------~~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd 279 (624)
T 1djx_A 236 DVLRAIRDYAF------KASPYPVILSLENHCSLEQQRVMARHLRAILGP 279 (624)
T ss_dssp HHHHHHHHHTT------TSCSSCEEEEEEEECCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhcc------cCCCCCEEEEecccCCHHHHHHHHHHHHHHHhh
Confidence 67788888888 468999999998899999999999998777764
No 69
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=27.16 E-value=31 Score=32.36 Aligned_cols=21 Identities=19% Similarity=0.191 Sum_probs=16.7
Q ss_pred CCeEEEeCCCceEEEeecCCC
Q 019039 4 RNVVVCDNGTGYVKCGFAGEN 24 (347)
Q Consensus 4 ~~~vViD~Gs~~ik~G~ag~~ 24 (347)
+-.+.||+||+++|++...++
T Consensus 6 ~~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp --CEEEEECSSEEEEEEECTT
T ss_pred ceEEEEEcCCCCeEEEEEECC
Confidence 457999999999999987644
No 70
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=27.00 E-value=52 Score=30.60 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcccccCC-CCCCCeEEEEcCCCC---C---HHHHHHHHhhccccc---CC--CeEeeehhh-------hH
Q 019039 81 EDMGQVWDHAFFSELKI-DPPECKILLTDPPLN---P---AKNREKMVETMFEKY---NF--AGVFIQIQA-------VL 141 (347)
Q Consensus 81 ~~l~~~~~~~~~~~l~~-~~~~~~v~l~e~~~~---~---~~~r~~l~e~lfe~~---~~--~~v~~~~~~-------~~ 141 (347)
+.++.+++++. +.... .-+..|+.+.-...+ + .+.++++++.+-+.+ ++ ..+.+++.. ++
T Consensus 89 ~~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 44666666654 22211 124567776544332 1 123455555544443 22 356666533 33
Q ss_pred hhhhCCC------ceEEEEecCCCceEEEEeecCe
Q 019039 142 TLYAQGL------LTGLVIDSGDGVTHVVPVVDGY 170 (347)
Q Consensus 142 a~~~~g~------~tglVVDiG~~~t~v~pv~dG~ 170 (347)
+.|..|. .+..++|+|+++|.|+-..++.
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 3444453 5667889999999998776654
No 71
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=26.57 E-value=1.4e+02 Score=25.37 Aligned_cols=49 Identities=12% Similarity=0.028 Sum_probs=32.6
Q ss_pred EEEEecCCCceEEEEeecCeecccceeEe-cccHHHHHHHHHHHHhhcCC
Q 019039 151 GLVIDSGDGVTHVVPVVDGYSFPHLTKRM-NVAGRHITSYLVDLLSRRGY 199 (347)
Q Consensus 151 glVVDiG~~~t~v~pv~dG~~~~~~~~~~-~~GG~~l~~~l~~~l~~~~~ 199 (347)
-|+||+|.+.+....+-++..+....... ....+.+...+.+++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 48999999998877776665554322111 34567777777888876653
No 72
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=23.56 E-value=54 Score=32.97 Aligned_cols=44 Identities=18% Similarity=0.210 Sum_probs=37.3
Q ss_pred HHHHHHHHHHcccccCCCCCCCeEEEEcCCCC-CHHHHHHHHhhcccccCC
Q 019039 81 EDMGQVWDHAFFSELKIDPPECKILLTDPPLN-PAKNREKMVETMFEKYNF 130 (347)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~~~v~l~e~~~~-~~~~r~~l~e~lfe~~~~ 130 (347)
+.++.|-+|+| ..++.||||+--..+ +.+++.++++++-|.||=
T Consensus 386 ~v~~~I~~~AF------~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd 430 (799)
T 2zkm_X 386 EAIEAIAESAF------KTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGD 430 (799)
T ss_dssp HHHHHHHHHTT------SSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhcc------cCCCCCEEEEccccCCCHHHHHHHHHHHHHHhhh
Confidence 67788888888 368899999988888 999999999998777764
No 73
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=23.52 E-value=44 Score=31.53 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=17.6
Q ss_pred CCeEEEeCCCceEEEeecCCC
Q 019039 4 RNVVVCDNGTGYVKCGFAGEN 24 (347)
Q Consensus 4 ~~~vViD~Gs~~ik~G~ag~~ 24 (347)
+-.+.||+||+++|++...++
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEeCCCceEEEEECCC
Confidence 357899999999999987554
No 74
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=23.23 E-value=35 Score=31.93 Aligned_cols=22 Identities=32% Similarity=0.303 Sum_probs=17.8
Q ss_pred CCCCCeEEEeCCCceEEEeecC
Q 019039 1 MDNRNVVVCDNGTGYVKCGFAG 22 (347)
Q Consensus 1 ~~~~~~vViD~Gs~~ik~G~ag 22 (347)
|.....+.||+||+++|++...
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEE
T ss_pred CCcceEEEEEecCCCceEEEEE
Confidence 5555689999999999999864
No 75
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=23.19 E-value=50 Score=33.07 Aligned_cols=27 Identities=15% Similarity=0.098 Sum_probs=23.1
Q ss_pred hcceEEecCCCCCCChHHHHHHHHhhc
Q 019039 295 YQHIVLSGGSTMYPGLPSRYYVELFFA 321 (347)
Q Consensus 295 ~~nIvl~GG~s~i~G~~erl~~eL~~~ 321 (347)
.+||+|+||.+.-.-+.++|.+.|+..
T Consensus 706 ~~~VvLSGGVa~N~~L~~~l~~~L~~~ 732 (772)
T 4g9i_A 706 VKNVALSGGVAYNELITKMIRKVVEAN 732 (772)
T ss_dssp CSCCCEESSTTCCHHHHHHHHHHGGGS
T ss_pred cCEEEEEchHHHHHHHHHHHHHHHHHC
Confidence 478999999998888888888888764
No 76
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=21.45 E-value=52 Score=30.94 Aligned_cols=33 Identities=12% Similarity=0.009 Sum_probs=21.8
Q ss_pred CCCeEeeehhhhHhhhhCCCc--eEEEEecCCCce
Q 019039 129 NFAGVFIQIQAVLTLYAQGLL--TGLVIDSGDGVT 161 (347)
Q Consensus 129 ~~~~v~~~~~~~~a~~~~g~~--tglVVDiG~~~t 161 (347)
++|-+.-.-+..+++++.|.. .-+++-+|.++.
T Consensus 237 g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~ 271 (506)
T 3h3n_X 237 EVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAF 271 (506)
T ss_dssp CCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEE
T ss_pred CCeEEEECCcHHHHHHhCCCCCCCcEEEEecchhe
Confidence 456666667888888888752 335666676653
No 77
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=21.09 E-value=55 Score=30.65 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=18.6
Q ss_pred CCCCCeEEEeCCCceEEEeecCCC
Q 019039 1 MDNRNVVVCDNGTGYVKCGFAGEN 24 (347)
Q Consensus 1 ~~~~~~vViD~Gs~~ik~G~ag~~ 24 (347)
|| .-.+.||+|++++|++...++
T Consensus 1 M~-~~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 1 ME-KFVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp CC-CEEEEEEECSSEEEEEEECTT
T ss_pred CC-cEEEEEecCCchhEEEEECCC
Confidence 65 347999999999999987554
No 78
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=20.92 E-value=37 Score=33.24 Aligned_cols=24 Identities=29% Similarity=0.243 Sum_probs=21.7
Q ss_pred cceEEecCCCCCCChHHHHHHHHh
Q 019039 296 QHIVLSGGSTMYPGLPSRYYVELF 319 (347)
Q Consensus 296 ~nIvl~GG~s~i~G~~erl~~eL~ 319 (347)
+.|+|+||.+.-..+.++|.+.+.
T Consensus 601 ~~VvLsGGV~~N~~Lre~L~~~l~ 624 (657)
T 3ttc_A 601 TTLVFSGGVIHNRLLRARLAHYLA 624 (657)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHTT
T ss_pred CEEEEECcHHHHHHHHHHHHHHhC
Confidence 579999999999999999998885
Done!