Your job contains 1 sequence.
>019041
MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM
ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA
LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL
DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL
KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD
GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITVC
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019041
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 1471 9.8e-151 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 1402 2.0e-143 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 1182 4.1e-120 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 1178 1.1e-119 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 1154 3.8e-117 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 1148 1.6e-116 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 1147 2.1e-116 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 1134 5.0e-115 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 1134 5.0e-115 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 1124 5.8e-114 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 1124 5.8e-114 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 1123 7.3e-114 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 1120 1.5e-113 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 1120 1.5e-113 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 1120 1.5e-113 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 1120 1.5e-113 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 1120 1.5e-113 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 1118 2.5e-113 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 1118 2.5e-113 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 1117 3.2e-113 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 1117 3.2e-113 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 1117 3.2e-113 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 1117 3.2e-113 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 1117 3.2e-113 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 1117 3.2e-113 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 1117 3.2e-113 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 1113 8.4e-113 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 1113 8.4e-113 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 1100 2.0e-111 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 1060 3.5e-107 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 1018 9.8e-103 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 1013 3.3e-102 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 1003 3.8e-101 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 1003 3.8e-101 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 985 3.1e-99 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 955 4.7e-96 1
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 945 5.3e-95 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 929 2.7e-93 1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 891 2.8e-89 1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 838 5.6e-88 2
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 817 1.3e-84 2
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 800 3.0e-79 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 791 1.1e-78 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 782 1.0e-77 1
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 775 5.5e-77 1
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 773 9.0e-77 1
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 779 1.1e-76 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 771 1.5e-76 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 771 1.5e-76 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 771 1.5e-76 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 771 1.5e-76 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 771 1.5e-76 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 771 1.5e-76 1
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 774 2.6e-76 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 766 5.0e-76 1
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 755 7.3e-75 1
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 757 1.7e-74 1
UNIPROTKB|G3MYF0 - symbol:LOC100300937 "Uncharacterized p... 751 1.9e-74 1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p... 751 1.9e-74 1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein... 751 1.9e-74 1
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 751 1.9e-74 1
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 750 2.5e-74 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 745 8.4e-74 1
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 745 8.4e-74 1
UNIPROTKB|Q9NXZ2 - symbol:DDX43 "Probable ATP-dependent R... 744 1.1e-73 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 738 4.7e-73 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 736 7.5e-73 1
UNIPROTKB|F1NVJ6 - symbol:DDX43 "Uncharacterized protein"... 732 2.0e-72 1
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 521 4.6e-72 2
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 521 4.7e-72 2
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 521 4.7e-72 2
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 521 4.7e-72 2
CGD|CAL0005725 - symbol:PRP5 species:5476 "Candida albica... 727 6.7e-72 1
UNIPROTKB|Q5ADL0 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 727 6.7e-72 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 722 2.3e-71 1
UNIPROTKB|F1NQ09 - symbol:DDX43 "Uncharacterized protein"... 718 6.1e-71 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 717 7.7e-71 1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 717 7.7e-71 1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 717 7.7e-71 1
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 690 8.2e-71 2
WB|WBGene00017162 - symbol:ddx-23 species:6239 "Caenorhab... 527 8.6e-71 2
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 523 1.4e-70 2
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 713 2.1e-70 1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 713 2.1e-70 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 713 2.1e-70 1
UNIPROTKB|E1BII7 - symbol:DDX43 "Uncharacterized protein"... 712 2.6e-70 1
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 712 2.6e-70 1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 711 3.3e-70 1
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 708 7.0e-70 1
UNIPROTKB|Q86TM3 - symbol:DDX53 "Probable ATP-dependent R... 707 8.9e-70 1
UNIPROTKB|F1S0I6 - symbol:DDX43 "Uncharacterized protein"... 707 8.9e-70 1
TAIR|locus:2034481 - symbol:STRS1 "STRESS RESPONSE SUPPRE... 705 1.4e-69 1
GENEDB_PFALCIPARUM|PFL1310c - symbol:PFL1310c "ATP-depend... 546 1.8e-68 2
DICTYBASE|DDB_G0293064 - symbol:DDB_G0293064 species:4468... 694 2.1e-68 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 676 1.7e-66 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 668 1.2e-65 1
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh... 666 2.0e-65 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 655 2.9e-64 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 544 4.8e-64 2
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe... 648 1.6e-63 1
WARNING: Descriptions of 791 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 1471 (522.9 bits), Expect = 9.8e-151, P = 9.8e-151
Identities = 284/341 (83%), Positives = 311/341 (91%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MTE +V MYR R+I+VEG DVP+P+++FQ+ANFPD LE IAKLGF EPTPIQAQGWPM
Sbjct: 139 MTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPM 198
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
ALKGRDLIGIAETGSGKTL+YLLPA VHVSAQPRL Q +GPIVL+LAPTRELAVQIQEE+
Sbjct: 199 ALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEES 258
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
KFG R+G+RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE QHTNL+RVTYLVL
Sbjct: 259 RKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVL 318
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRMLDMGFEPQIRKIV+QIRPDRQTL WSATWPREVETLARQFLR+PYK IIGS +L
Sbjct: 319 DEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDL 378
Query: 241 KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD 300
KANQSINQV+E+V EKYN RL+ LLK++MDGS+ILIF ETK+GCDQVTRQLRMD
Sbjct: 379 KANQSINQVIEIVPTPEKYN-----RLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMD 433
Query: 301 GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
GWPAL+IHGDK QSERD VLAEF+SGRSPIMTATDVAARGL
Sbjct: 434 GWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 1402 (498.6 bits), Expect = 2.0e-143, P = 2.0e-143
Identities = 259/341 (75%), Positives = 309/341 (90%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+TEV+ YR REITVEG D+P+P++ F++ FPDY LE + K GF EPTPIQ+QGWPM
Sbjct: 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPM 132
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
A+KGRDLIGIAETGSGKTLSYLLPA VHV+AQP L G+GPIVLVLAPTRELAVQIQ+EA
Sbjct: 133 AMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEA 192
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
KFGS + I++TCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E+ +TNLRRVTYLVL
Sbjct: 193 SKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVL 252
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRMLDMGF+PQIRKIV+ IRPDRQTLYWSATWP+EVE L+++FL NPYKVIIGS +L
Sbjct: 253 DEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDL 312
Query: 241 KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD 300
KAN++I Q+V+V++E++KYN +L+KLL+++MDGSRIL+F +TKKGCDQ+TRQLRMD
Sbjct: 313 KANRAIRQIVDVISESQKYN-----KLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMD 367
Query: 301 GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
GWPALSIHGDK+Q+ERDWVL+EFRSG+SPIMTATDVAARGL
Sbjct: 368 GWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGL 408
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 225/342 (65%), Positives = 272/342 (79%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
++ +++ +R E+TV+GHD+P PI F EA FPDY L+ + GF +PTPIQ QGWPMA
Sbjct: 102 SDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMA 161
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L GRD+IGIA TGSGKTLSY LP+ VH++AQP+L G+GPIVLVLAPTRELAVQIQ E
Sbjct: 162 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECS 221
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KFG + IR+TC+YGGAPKGPQIRDL RGVEI IATPGRLIDMLEA TNL+RVTYLVLD
Sbjct: 222 KFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLD 281
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV+ L R +L +P +V IGSLEL
Sbjct: 282 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELA 341
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD--GSRILIFTETKKGCDQVTRQLRM 299
A+ +I Q+VEV+ E K + RL+K L+ ++ ++IL+F TK+ CD++T LR
Sbjct: 342 ASHTITQLVEVIDEFSKRD-----RLVKHLESALNEKDNKILVFASTKRTCDEITTYLRS 396
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPAL+IHGDK Q+ERDWVL EFR G++ IM ATDVAARG+
Sbjct: 397 DGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGI 438
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
Identities = 226/342 (66%), Positives = 272/342 (79%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
++ EV +R + E+TV+G DVPRP+ F EA FP Y L + GF +PT IQ+QGWPMA
Sbjct: 115 SQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMA 174
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L GRD++GIAETGSGKTLSY LPA VH++AQP L G+GPIVL+LAPTRELAVQIQ E
Sbjct: 175 LSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEIS 234
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KFG + IR+TC+YGG PKGPQIRDL RGVE+ IATPGRLIDMLEA TNLRRVTYLVLD
Sbjct: 235 KFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLD 294
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKI++QIRPDRQT WSATWP+EV LA FL N +V IGS++L
Sbjct: 295 EADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLS 354
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD--GSRILIFTETKKGCDQVTRQLRM 299
AN I Q+VEV++E EK + R+IK L+++M+ G++ L+FT TK+ D++TR LR
Sbjct: 355 ANHRITQIVEVISEFEKRD-----RMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQ 409
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPALSIHGDK Q ERDWVL EF++G+SPIM ATDVA+RG+
Sbjct: 410 DGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGI 451
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 1154 (411.3 bits), Expect = 3.8e-117, P = 3.8e-117
Identities = 221/344 (64%), Positives = 272/344 (79%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
++ EV +R + V+G DVP+P+ F EA FP Y ++ + GF PT IQ+QGWPMA
Sbjct: 100 SQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMA 159
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L GRD++GIAETGSGKTL+Y LPA VH++AQP L G+GPIVL+LAPTRELAVQIQ E
Sbjct: 160 LSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEIS 219
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KFG + IR+TC+YGG PKGPQIRDL RGVE+ IATPGRLIDMLE+ TNLRRVTYLVLD
Sbjct: 220 KFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLD 279
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWP+EV +A FL++ +V IGSL+L
Sbjct: 280 EADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLS 339
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG----SRILIFTETKKGCDQVTRQL 297
AN I Q+VEVV+E+EK + R+I+ +++VMDG ++ILIF TK+ D++TR L
Sbjct: 340 ANHRITQIVEVVSESEKRD-----RMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFL 394
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPALSIHGDK Q+ERDWVL +F++G+SPIM ATDVA+RG+
Sbjct: 395 RQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGI 438
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 219/339 (64%), Positives = 270/339 (79%)
Query: 5 EVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKG 64
EV+ YR +EITV+G D P+PI F EANFP Y ++VI K + +PTPIQAQGWP+AL G
Sbjct: 74 EVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSG 133
Query: 65 RDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFG 124
+D++GIA+TGSGKTLSYLLPA VH++ QP L G+GPI LVLAPTRELA Q+Q+ A ++G
Sbjct: 134 KDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLVLAPTRELAQQVQQVAAEYG 193
Query: 125 SRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEAD 184
+ I+STCIYGGAPKGPQIRDL RGVEI IATPGRLID LEA TNLRR TYLVLDEAD
Sbjct: 194 KASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEAD 253
Query: 185 RMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQ 244
RMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL+ ++ +G+L+L AN
Sbjct: 254 RMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANH 313
Query: 245 SINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRMDGW 302
+I Q+V+V + EK + +LI+LL+E+M ++ +IF ETK+ CD +TR++R DGW
Sbjct: 314 NILQIVDVCNDGEKED-----KLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGW 368
Query: 303 PALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
PA+ IHGDKNQ ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 369 PAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGL 407
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 222/342 (64%), Positives = 264/342 (77%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
+++E+ +R E+T+ GHD+P+PI F EA FPDY L + GF +PT IQ QGWPMA
Sbjct: 88 SDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMA 147
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L GRD++GIA TGSGKTLSY LP VH++AQP L G+GPIVLVLAPTRELAVQIQ E
Sbjct: 148 LSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECS 207
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KFG + IR+TC+YGG PK QIRDL RG EIVIATPGRLIDMLE TNL+RVTYLVLD
Sbjct: 208 KFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLD 267
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV+ LA +L +P +V +GSLEL
Sbjct: 268 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELS 327
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS--RILIFTETKKGCDQVTRQLRM 299
A+ +I Q+VEVV++ EK + RL K L+ + + LIF TK+ CD +T+ LR
Sbjct: 328 ASHNITQIVEVVSDFEKRD-----RLNKYLETASQDNEYKTLIFASTKRMCDDITKYLRE 382
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPAL+IHGDK+Q ERDWVL EFR+GRSPIM ATDVAARG+
Sbjct: 383 DGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGI 424
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 219/342 (64%), Positives = 271/342 (79%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
++ EV YR +EI V G +VP+P+ F+EA FP+Y L+ + +LGF PTPIQ Q WPMA
Sbjct: 97 SDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMA 156
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
+ GRD++GI+ TGSGKTLSY LPA VH++AQP L G+GPIVLVLAPTRELAVQIQ+E
Sbjct: 157 MSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECT 216
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KFG + IR+TC+YGG P+GPQIRDL RGVEI IATPGRL+DML++ TNLRRVTYLVLD
Sbjct: 217 KFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLD 276
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQT+ +SATWP+EV+ LAR +L + +V +GSL+L
Sbjct: 277 EADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLA 336
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
A+ +I Q+VEVV A+K RL K ++EV+ +++LIFT TK+ D +TR LR
Sbjct: 337 ASHNIKQIVEVVDNADKR-----ARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQ 391
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPAL+IHGDK Q ERDWVL EFR+G+SPIM ATDVA+RG+
Sbjct: 392 DGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGI 433
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 217/343 (63%), Positives = 272/343 (79%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M++ +V+ YR +REITV G P+P+ F +A FP Y ++V+ + F EPT IQAQG+P+
Sbjct: 69 MSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPL 128
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 ALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVA 188
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+G + I+STC+YGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVL
Sbjct: 189 FDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVL 248
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ ++ IG+LEL
Sbjct: 249 DEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALEL 308
Query: 241 KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQLR 298
AN +I Q+V+V E EK N +LI+L++E+M ++ +IF ETKK CD++TR++R
Sbjct: 309 SANHNILQIVDVCMENEKDN-----KLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMR 363
Query: 299 MDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 364 RDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGL 406
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 215/342 (62%), Positives = 267/342 (78%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR+ +E+TV GH+ P+PI F EANFP +EVI + F EPT IQAQGWP+A
Sbjct: 57 TAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVA 116
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 117 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 176
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LEA TNLRR TYLVLD
Sbjct: 177 EYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLD 236
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL+ + IG+LEL
Sbjct: 237 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELS 296
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK + +LI+L++E+M ++ ++F ETK+ CD +TR++R
Sbjct: 297 ANHNILQIVDVCHDVEKDD-----KLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRR 351
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 352 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 393
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 215/342 (62%), Positives = 267/342 (78%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR+ +E+TV GH+ P+PI F EANFP +EVI + F EPT IQAQGWP+A
Sbjct: 65 TAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVA 124
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 125 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 184
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LEA TNLRR TYLVLD
Sbjct: 185 EYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLD 244
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL+ + IG+LEL
Sbjct: 245 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELS 304
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK + +LI+L++E+M ++ ++F ETK+ CD +TR++R
Sbjct: 305 ANHNILQIVDVCHDVEKDD-----KLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRR 359
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 360 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 401
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 218/345 (63%), Positives = 272/345 (78%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 65 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 124
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 125 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 184
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+ TNLRR TYLV
Sbjct: 185 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLV 244
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+LE
Sbjct: 245 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 304
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 305 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 359
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLG 342
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGLG
Sbjct: 360 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLG 404
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 214/342 (62%), Positives = 267/342 (78%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVLD
Sbjct: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 249 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 308
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 309 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 363
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 364 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 214/342 (62%), Positives = 267/342 (78%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 126 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 185
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 186 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 245
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVLD
Sbjct: 246 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 305
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 306 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 365
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 366 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 420
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 421 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 462
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 214/342 (62%), Positives = 267/342 (78%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVLD
Sbjct: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 249 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 308
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 309 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 363
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 364 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 214/342 (62%), Positives = 267/342 (78%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVLD
Sbjct: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 249 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 308
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 309 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 363
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 364 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 214/342 (62%), Positives = 267/342 (78%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVLD
Sbjct: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 249 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 308
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 309 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 363
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 364 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 214/342 (62%), Positives = 266/342 (77%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 69 TAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVLD
Sbjct: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 249 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 308
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 309 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 363
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 364 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 214/342 (62%), Positives = 266/342 (77%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 69 TAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVLD
Sbjct: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 249 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 308
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 309 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 363
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 364 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 217/344 (63%), Positives = 271/344 (78%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 65 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 124
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 125 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 184
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+ TNLRR TYLV
Sbjct: 185 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLV 244
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+LE
Sbjct: 245 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 304
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 305 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 359
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 360 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 403
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 217/344 (63%), Positives = 271/344 (78%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 65 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 124
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 125 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 184
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+ TNLRR TYLV
Sbjct: 185 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLV 244
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+LE
Sbjct: 245 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 304
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 305 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 359
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 360 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 403
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 217/344 (63%), Positives = 271/344 (78%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 146 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 205
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 206 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 265
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+ TNLRR TYLV
Sbjct: 266 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLV 325
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+LE
Sbjct: 326 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 385
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 386 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 440
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 441 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 484
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 217/344 (63%), Positives = 271/344 (78%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 144 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 203
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 204 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 263
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+ TNLRR TYLV
Sbjct: 264 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLV 323
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+LE
Sbjct: 324 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 383
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 384 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 438
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 439 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 482
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 217/344 (63%), Positives = 271/344 (78%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 144 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 203
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 204 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 263
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+ TNLRR TYLV
Sbjct: 264 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLV 323
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+LE
Sbjct: 324 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 383
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 384 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 438
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 439 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 482
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 217/344 (63%), Positives = 271/344 (78%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 146 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 205
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 206 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 265
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+ TNLRR TYLV
Sbjct: 266 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLV 325
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+LE
Sbjct: 326 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 385
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 386 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 440
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 441 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 484
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 217/344 (63%), Positives = 271/344 (78%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 65 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 124
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 125 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 184
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+ TNLRR TYLV
Sbjct: 185 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLV 244
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+LE
Sbjct: 245 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLE 304
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 305 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 359
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 360 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 403
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 213/342 (62%), Positives = 266/342 (77%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVE IATPGRLID LE TNLRR TYLVLD
Sbjct: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLD 248
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 249 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 308
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 309 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 363
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ ATDVA+RGL
Sbjct: 364 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 213/342 (62%), Positives = 266/342 (77%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T EV+ YR +EITV GH+ P+P+ F EANFP ++VIA+ F EPT IQAQGWP+A
Sbjct: 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L G D++G+A+TGSGKTLSYLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+ A
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
++ ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE TNLRR TYLVLD
Sbjct: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ + IG+LEL
Sbjct: 249 EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELS 308
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V + EK +LI+L++E+M ++ ++F ETK+ CD++TR++R
Sbjct: 309 ANHNILQIVDVCHDVEKDE-----KLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRR 363
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
DGWPA+ IHGDK+Q ER WVL EF+ G++PI+ ATDVA+RGL
Sbjct: 364 DGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATDVASRGL 405
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 211/344 (61%), Positives = 270/344 (78%)
Query: 1 MTETEVKMYRARREITVEGHD-VPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV+ R ++EIT+ G + P+P+ F + +FP Y ++ + F EPTPIQ QG+P
Sbjct: 63 LTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFP 122
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPI LVLAPTRELA Q+Q+
Sbjct: 123 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQV 182
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A +G + ++STCIYGGAPKGPQIRDL RGVEI IATPGRLID LEA TNLRR TYLV
Sbjct: 183 ADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLV 242
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FL++ ++ +G+LE
Sbjct: 243 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLE 302
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQL 297
L AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR++
Sbjct: 303 LSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM 357
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 358 RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 401
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 208/342 (60%), Positives = 258/342 (75%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T E + + EIT++G VP P F+E FPDY + I K GF +PT IQAQGWP+A
Sbjct: 132 TVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIA 191
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
+ GRDL+G+A+TGSGKTL+Y+LPA VH++ QPRL +G+GPI LVLAPTRELA QIQ+ A+
Sbjct: 192 MSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAI 251
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
+FGS +R+TCI+GGAPKG Q RDL RGVEIVIATPGRLID LE T+L+R TYLVLD
Sbjct: 252 EFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLD 311
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKI+ QIRPDRQ L WSATWP+EV LA +FL N +V IGSL L
Sbjct: 312 EADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLS 371
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQLRM 299
AN +I Q+V+V E EK + +LIKLL ++ + ++ +IF ETKK D++TR +
Sbjct: 372 ANHNILQIVDVCDENEK-----LMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISR 426
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
GW A +IHGDK+Q ERD+VL+ FR+GR I+ ATDVAARGL
Sbjct: 427 QGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGL 468
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 197/340 (57%), Positives = 261/340 (76%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
T+ E++ +RA ++TV+G +VP PI F +A FP Y ++ I GF PTPIQ+Q WP+A
Sbjct: 359 TQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIA 418
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
LKGRD+IG+A+TGSGKTL++LLP+ VH++AQP L + +GPIVLVLAPTRELA+QIQEE
Sbjct: 419 LKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETN 478
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KFG + I +TC+YGGA K Q+ L++GVEIVIATPGRLID+LE+ TNLRRVTYLVLD
Sbjct: 479 KFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLD 538
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELK 241
EADRMLDMGFEPQIRKI++QIRPDRQTL +SATWP+EV+ LA FL + +V IGS E+
Sbjct: 539 EADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEIT 598
Query: 242 ANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDG 301
AN ++ Q+VEV + EK R++ L V ++++F ET+KG D + R L+ G
Sbjct: 599 ANHNVRQIVEVCQDFEKKE-----RMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSG 653
Query: 302 WPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ ++ IHG+K+Q ERD+VL++F++G PIM ATDVA+RGL
Sbjct: 654 FKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGL 693
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 207/341 (60%), Positives = 255/341 (74%)
Query: 5 EVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKG 64
EV+ YR +EITV G VP PI+ F E + PDY ++ I + G+ PT IQAQGWP+A+ G
Sbjct: 260 EVQRYREEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSG 318
Query: 65 RDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFG 124
+ +GIA+TGSGKTL Y+LPA VH++ Q L +G+GPI LVLAPTRELA QIQ+ A +FG
Sbjct: 319 SNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFG 378
Query: 125 SRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEAD 184
S + +R+TC++GGAPKG Q+RDL+RG EIVIATPGRLID L A TNL+R TYLVLDEAD
Sbjct: 379 SSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEAD 438
Query: 185 RMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQ 244
RMLDMGFEPQIRKIV+QIRPDRQTL WSATWP+EV+ LA FL N ++ IGSLEL AN
Sbjct: 439 RMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANH 498
Query: 245 SINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS----RILIFTETKKGCDQVTRQLRMD 300
+I QVV+V E K +L LL ++ D S +I+IF ETK+ D + R +R
Sbjct: 499 NIRQVVDVCDEFSKEE-----KLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSF 553
Query: 301 GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
G +IHGDK+QSERD+VL EFRSG+S I+ ATDVAARGL
Sbjct: 554 GVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGL 594
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 201/344 (58%), Positives = 253/344 (73%)
Query: 1 MTETEVKMYRARREITV-EGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
++ EVK R + +IT+ EG +VP+P+ + FPDY ++ + V PTPIQ QGWP
Sbjct: 86 LSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWP 145
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL G+D+IG AETGSGKTL+++LPAFVH+ AQP L G+GPIVLVLAPTRELA QI++E
Sbjct: 146 IALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQE 205
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+KF + + IR+TC YGG PK QI L++GV I+IA PGRLID+LE TNL RVTYLV
Sbjct: 206 CIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLV 265
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRN-PYKVIIGSL 238
LDEAD+MLDMGFE QIRKIV QIRPDRQTL WSATWP+EV+ LA+ + P +V +GSL
Sbjct: 266 LDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSL 325
Query: 239 ELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM-DGSRILIFTETKKGCDQVTRQL 297
L A +SI Q + ++ E EK I L LL+ + D RI++F ETKK D +T+ L
Sbjct: 326 TLTACRSIKQEIYLLEEHEK-----IGNLKSLLQRIFKDNDRIIVFVETKKNADFITKAL 380
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R+DG PAL IHGDK Q ER WVL EF++G+SPIM ATDVA+RGL
Sbjct: 381 RLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGL 424
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 201/344 (58%), Positives = 253/344 (73%)
Query: 1 MTETEVKMYRARREITV-EGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
++ EVK R + +IT+ EG +VP+P+ + FPDY ++ + V PTPIQ QGWP
Sbjct: 86 LSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWP 145
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL G+D+IG AETGSGKTL+++LPAFVH+ AQP L G+GPIVLVLAPTRELA QI++E
Sbjct: 146 IALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQE 205
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+KF + + IR+TC YGG PK QI L++GV I+IA PGRLID+LE TNL RVTYLV
Sbjct: 206 CIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLV 265
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRN-PYKVIIGSL 238
LDEAD+MLDMGFE QIRKIV QIRPDRQTL WSATWP+EV+ LA+ + P +V +GSL
Sbjct: 266 LDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSL 325
Query: 239 ELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM-DGSRILIFTETKKGCDQVTRQL 297
L A +SI Q + ++ E EK I L LL+ + D RI++F ETKK D +T+ L
Sbjct: 326 TLTACRSIKQEIYLLEEHEK-----IGNLKSLLQRIFKDNDRIIVFVETKKNADFITKAL 380
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R+DG PAL IHGDK Q ER WVL EF++G+SPIM ATDVA+RGL
Sbjct: 381 RLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGL 424
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 193/345 (55%), Positives = 257/345 (74%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
+E +V R EITV G+++P P+ F+E++ P + +E + + GF +PT IQ+QGWP+A
Sbjct: 212 SEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIA 271
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
L GRDL+GIA+TGSGKTL+Y+LPA VH+ QP +++GEGPI LVLAPTRELA QIQ
Sbjct: 272 LSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVR 331
Query: 122 KFGS--RAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+G + IR TCI+GG+ K PQ RDL RGVE++IATPGRLID LE ++TNL+R TYLV
Sbjct: 332 DYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLV 391
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
LDEADRMLDMGFEPQIRKI+ QIRPDRQ + WSATWP+EV+ LA FL + ++ IGS+
Sbjct: 392 LDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMN 451
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRL--IKLLKEV-MDGSRILIFTETKKGCDQVTRQ 296
L AN +I Q+VE+ TE EK + +C L I +K +G++I++F ETK + + +
Sbjct: 452 LSANHNIRQIVEICTEIEKPQRL-VCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQI 510
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+R +G+ A SIHGDK Q+ERD VL +FR+G+S I+ ATDVA+RGL
Sbjct: 511 IRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGL 555
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 185/339 (54%), Positives = 248/339 (73%)
Query: 5 EVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKG 64
E+ + + ++T+EG VPRP+ F EA P E++ F +PT IQ+ WP+A+ G
Sbjct: 108 EIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSG 166
Query: 65 RDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFG 124
RD+I IA+TGSGKTL+++LPA VH++ Q +GEGP VLVL PTRELA Q+QE ++ F
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC 226
Query: 125 SRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEAD 184
G++ TC++GGA KGPQ RDL RGV+IV+ATPGRL+D L+ TN+++ +YLVLDEAD
Sbjct: 227 HSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEAD 286
Query: 185 RMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQ 244
RMLDMGFEPQI+KI+ QIRPDRQTL +SATWP+EV LA F ++ + +GSLEL AN
Sbjct: 287 RMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANH 346
Query: 245 SINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS--RILIFTETKKGCDQVTRQLRMDGW 302
+I QVV+++ E K +L++LL +M+ + +IF ETK+ D++TR +R DGW
Sbjct: 347 NITQVVDILEEHAKQ-----AKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGW 401
Query: 303 PALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
P L IHGDKNQ ERDWVL EF++G++PIM ATDVAARGL
Sbjct: 402 PTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGL 440
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 193/345 (55%), Positives = 249/345 (72%)
Query: 1 MTETEVKMYRARREITVEGHDV-PRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
+T EV R ++EITV G DV P+P+ F ANFP Y ++V+ F EPTPIQ QG+P
Sbjct: 65 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 124
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+AL GRD++GIA+TGSGKTL+YLLPA VH++ QP L +G+GPIV VL P +
Sbjct: 125 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPIVSVL-PFFSTLFSVYRG 183
Query: 120 ALKFGSR-AGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
F + + + C G + KG ++ L + VEI IATPGR ID LE+ TNLRR TYL
Sbjct: 184 GTDFKFKCSSLFWVCFLGQSLKGQRLEWLSQCVEICIATPGR-IDFLESGKTNLRRCTYL 242
Query: 179 VLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSL 238
VLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP+EV LA FLR+ ++ +G+L
Sbjct: 243 VLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNL 302
Query: 239 ELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM--DGSRILIFTETKKGCDQVTRQ 296
EL AN +I Q+V+V E+EK + +LI+L++E+M ++ +IF ETK+ CD +TR+
Sbjct: 303 ELSANHNILQIVDVCMESEKDH-----KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRR 357
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+R DGWPA+ IHGDK+Q ERDWVL EFRSG++PI+ ATDVA+RGL
Sbjct: 358 MRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 402
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 189/341 (55%), Positives = 243/341 (71%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMA 61
+E + Y R EITV G VP P+ F+ FP L + GF PTPIQAQ WP+A
Sbjct: 133 SELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIA 192
Query: 62 LKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
++GRD++ IA+TGSGKTL YL+P F+H+ + R GP +LVL+PTRELA QIQEEA+
Sbjct: 193 MQGRDIVAIAKTGSGKTLGYLIPGFLHLQ-RIRNDSRMGPTILVLSPTRELATQIQEEAV 251
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KFG + I TC+YGGAPKGPQ+RDL RG +IV+ATPGRL D+LE + +LR+++YLVLD
Sbjct: 252 KFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLD 311
Query: 182 EADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSL-EL 240
EADRMLDMGFEPQIRKIV +I RQTL ++ATWP+ V +A L NP +V IG++ EL
Sbjct: 312 EADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 241 KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD 300
AN+SI Q +EVV EK RL ++L+ GS+++IF TK+ CDQ+TR L
Sbjct: 372 VANKSITQHIEVVAPMEKQR-----RLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ 426
Query: 301 GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ A +IHGDK+Q ERD VL +FRSGR+P++ ATDVAARGL
Sbjct: 427 -FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGL 466
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 180/337 (53%), Positives = 238/337 (70%)
Query: 6 VKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGR 65
V++YR + E+T G ++P P F+ + P L + GF PTPIQAQ WP+AL+ R
Sbjct: 414 VEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSR 473
Query: 66 DLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGS 125
D++ IA+TGSGKTL YL+PAF+ + R GP VL+LAPTRELA QIQ+EAL+FG
Sbjct: 474 DIVAIAKTGSGKTLGYLIPAFI-LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGR 532
Query: 126 RAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADR 185
+ I TC+YGGAPKGPQ+++L RG +IV+ATPGRL D+LE + + ++V+ LVLDEADR
Sbjct: 533 SSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADR 592
Query: 186 MLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSL-ELKANQ 244
MLDMGFEPQIRKIV +I P RQTL ++ATWP+EV +A L NP +V IG + EL AN+
Sbjct: 593 MLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANK 652
Query: 245 SINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPA 304
+I Q VEVV + EK RL ++L+ GS+++IF TK+ CD + R + + A
Sbjct: 653 AITQYVEVVPQMEKER-----RLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGA 706
Query: 305 LSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ IHGDK Q ERDWVL +FRSG+S ++ ATDVAARGL
Sbjct: 707 VVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGL 743
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 838 (300.0 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 173/327 (52%), Positives = 232/327 (70%)
Query: 23 PRPIRIFQEANFPDYCL-----EVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGK 77
P +R A F Y + ++ GF P+PIQAQ WP+A++ RD++ IA+TGSGK
Sbjct: 220 PNFLRCPPAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGK 279
Query: 78 TLSYLLPAFVHVSAQPRLVQGE--GPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIY 135
TL YL+P F+H+ R+ GP +LVL+PTRELA QIQ EALKFG + I C+Y
Sbjct: 280 TLGYLIPGFMHLQ---RIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLY 336
Query: 136 GGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQI 195
GGAPKGPQ++++ RGV+IV+ATPGRL D+LE + +L +V+YLVLDEADRMLDMGFEPQI
Sbjct: 337 GGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQI 396
Query: 196 RKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSL-ELKANQSINQVVEVVT 254
RKIV ++ RQTL ++ATWP+EV +A L NP +V IG++ EL AN+SI Q +EV+
Sbjct: 397 RKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLA 456
Query: 255 EAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQS 314
EK++ RL ++L+ GS+I+IF TK+ CDQ+ R L + A +IHGDK+Q+
Sbjct: 457 PMEKHS-----RLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQA 510
Query: 315 ERDWVLAEFRSGRSPIMTATDVAARGL 341
ERD VL +FRSGR+P++ ATDVAARGL
Sbjct: 511 ERDDVLNQFRSGRTPVLVATDVAARGL 537
Score = 60 (26.2 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 3 ETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCL 39
E + Y + EITV G VP P+ F+ P+ L
Sbjct: 137 ELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELL 173
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 817 (292.7 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 158/248 (63%), Positives = 196/248 (79%)
Query: 96 VQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVI 155
V+G+GPI LVLAPTRELA Q+Q+ A ++ ++STCIYGGAPKGPQIRDL RGVEI I
Sbjct: 84 VRGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICI 143
Query: 156 ATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATW 215
ATPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATW
Sbjct: 144 ATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 203
Query: 216 PREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM 275
P+EV LA FL++ + IG+LEL AN +I Q+V+V + EK +LI+L++E+M
Sbjct: 204 PKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDE-----KLIRLMEEIM 258
Query: 276 DG--SRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTA 333
++ ++F ETK+ CD++TR++R DGWPA+ IHGDK+Q ERDWVL EF+ G++PI+ A
Sbjct: 259 SEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIA 318
Query: 334 TDVAARGL 341
TDVA+RGL
Sbjct: 319 TDVASRGL 326
Score = 49 (22.3 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 2 TETEVKMYRARREITVEGHDVP 23
T EV+ YR +EITV G D P
Sbjct: 69 TAQEVETYRRSKEITVRG-DGP 89
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 800 (286.7 bits), Expect = 3.0e-79, P = 3.0e-79
Identities = 158/344 (45%), Positives = 230/344 (66%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ EV YR E+ V G DVPRPI+ + + L+ + KL + +P PIQ Q P+
Sbjct: 503 MTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPI 562
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
+ GRD IG+A+TGSGKTL ++LP H+ QP + G+GPI LV+APTREL QI +
Sbjct: 563 IMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDI 622
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDML---EAQHTNLRRVTY 177
KF GIR +YGG+ QI +L+RG EIV+ TPGR+ID+L + TNLRRVT+
Sbjct: 623 RKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTF 682
Query: 178 LVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
LV+DEADRM DMGFEPQI +I+ IRP+RQT+ +SAT+PR+VETLAR+ L P ++ +G
Sbjct: 683 LVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGG 742
Query: 238 LELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL 297
+ N+ I Q+VEV E++++ RL++LL E + +IL+F ++++ CD + R +
Sbjct: 743 RSV-VNKDITQLVEVRPESDRF-----LRLLELLGEWSEKGKILVFVQSQEKCDALYRDM 796
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+P LS+HG K+Q++R+ +++F++ ++ AT VAARGL
Sbjct: 797 IKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGL 840
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 164/342 (47%), Positives = 226/342 (66%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MTE E YR R I V G DV RP++ F++ F + I K + +PT IQ Q P+
Sbjct: 202 MTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPI 261
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD+IGIA+TGSGKT +++LP VH+ QP L + EGPI ++ APTRELA QI EA
Sbjct: 262 VLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEA 321
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
KF G+R + +YGG K Q ++L+ G EIV+ATPGRLIDML+ + + R +YLVL
Sbjct: 322 KKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVL 381
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM D+GFEPQ+R IV QIRPDRQTL +SAT P +VE LAR+ L +P +V +G + +
Sbjct: 382 DEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM 441
Query: 241 KANQSINQVVEVV-TEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
AN+ I QVV V+ ++AEK + L++ L ++D +L+F K D++ QL +
Sbjct: 442 -ANEDITQVVNVIPSDAEK-----LPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTL 495
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ + ++HGDK+Q+ R L +F+SG ++ ATDVAARGL
Sbjct: 496 NSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGL 537
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 157/345 (45%), Positives = 226/345 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
MT+ EV +YR E ITV+G P+PI+ + + L + K G+ +PTPIQ+Q P
Sbjct: 344 MTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQAIP 403
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q L +GEGPI +++ PTRELA+QI +E
Sbjct: 404 AIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKE 463
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A + TNLRRVT
Sbjct: 464 CKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVT 523
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 524 YVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVG 583
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + + Q V V+ E K+ +L++LL + ++IF + ++ D + +
Sbjct: 584 GRSVVCSD-VEQHVIVIEEENKF-----LKLLELLGHYQEKGSVIIFVDKQEHADGLLKD 637
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P LS+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 638 LMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 682
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 162/348 (46%), Positives = 228/348 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
MTE EV R + I V G DVP+P++ + L+VIAKL + +PT IQ Q P
Sbjct: 351 MTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALP 410
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ + GRD++G+A+TGSGKT+++LLP F H+ Q + EGPI L+L PTRELAVQI +
Sbjct: 411 VIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRD 470
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
F G+R+ C YGG P QI DL+RG EIV+AT GR+ID+L A +LRR T
Sbjct: 471 CKPFLKTLGLRAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTT 530
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ KI +RPDRQT+ +SAT P+ ++ L ++ L+NP ++ +G
Sbjct: 531 YIVLDEADRMFDMGFEPQVMKIFANVRPDRQTVLFSATMPKIMDALVKKVLKNPVEIEVG 590
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM---DGSRILIFTETKKGCDQV 293
+ A++ I Q+VE+ E K+N RL++LL E+ D R LIF E ++ D++
Sbjct: 591 GKSVVASE-ITQIVEIRDEKSKFN-----RLLELLGELYKDDDDVRSLIFVERQEKADEL 644
Query: 294 TRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R+L G+ +S+HG K+Q +RD +++F+SG P+M AT VAARGL
Sbjct: 645 LRELLRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGL 692
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 161/357 (45%), Positives = 239/357 (66%)
Query: 1 MTETEVKMYRARR-EITV-------EGHD---VPRPIRIFQE--ANFPDYCLEVIAKLGF 47
+T++E++ R +ITV EG +P P+ F++ A +PD LE I K+GF
Sbjct: 245 LTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDM-LEEITKMGF 303
Query: 48 VEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQ--PRLVQGEGPIVLV 105
+P+PIQ+Q WP+ L+G D+IGIA+TG+GKTL++LLP +H Q PR +G G VLV
Sbjct: 304 SKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLV 362
Query: 106 LAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDML 165
LAPTRELA+QI+ E K+ R G+++ C+YGG + QI DL RG EI+I TPGRL D++
Sbjct: 363 LAPTRELALQIEMEVKKYSFR-GMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLI 421
Query: 166 EAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQ 225
A ++ +TYLVLDEADRMLDMGFEPQIRK++ IRPDRQT+ SATWP V LA+
Sbjct: 422 MANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQS 481
Query: 226 FLRNPYKVIIGSLELKANQSINQVVEVVTE-AEKYNSMFICRLIKLLKEVMDGSRILIFT 284
+++NP +V +GSL+L A S+ Q+++++ + +K+N+ + +K + +I+IF
Sbjct: 482 YMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNT-----ITSFVKNMSSTDKIIIFC 536
Query: 285 ETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
K D ++ +L +DG+ IHG+++Q +R+ +A+ +SG I+ ATDVA+RGL
Sbjct: 537 GRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGL 593
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 779 (279.3 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 154/345 (44%), Positives = 229/345 (66%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
MT +V+ YR+ E I V+G P+PI+ + + +EV+ +LGF +PTPIQ Q P
Sbjct: 483 MTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIP 542
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKTL+++LP F H+ QP + G+G I +++APTREL +QI ++
Sbjct: 543 AIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKD 602
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A TNLRRVT
Sbjct: 603 IRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 662
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+PR++E LAR+ L+ P +VI+G
Sbjct: 663 YVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVG 722
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + + Q V ++ + K+ F +L++LL + I++F + ++ D + R
Sbjct: 723 GRSVVCKE-VEQHVVILNDDAKF---F--KLLELLGIYQEAGSIIVFVDKQENADILLRD 776
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD + +F+SG+ ++ AT VAARGL
Sbjct: 777 LMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGL 821
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/345 (44%), Positives = 225/345 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M++ EV ++R E ITV+G P+PI+ + + L + K G+ +PTPIQ Q P
Sbjct: 345 MSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIP 404
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q L +GEGPI +++ PTRELA+QI +E
Sbjct: 405 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKE 464
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A TNLRRVT
Sbjct: 465 CKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 524
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 525 YVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + QV+ V+ E +K+ +L++LL + ++IF + ++ D + +
Sbjct: 585 GRSVVCSDVEQQVI-VIEEEKKF-----LKLLELLGHYQESGSVIIFVDKQEHADGLLKD 638
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 639 LMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/345 (44%), Positives = 225/345 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M++ EV ++R E ITV+G P+PI+ + + L + K G+ +PTPIQ Q P
Sbjct: 345 MSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIP 404
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q L +GEGPI +++ PTRELA+QI +E
Sbjct: 405 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKE 464
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A TNLRRVT
Sbjct: 465 CKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 524
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 525 YVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + QV+ V+ E +K+ +L++LL + ++IF + ++ D + +
Sbjct: 585 GRSVVCSDVEQQVI-VIEEEKKF-----LKLLELLGHYQESGSVIIFVDKQEHADGLLKD 638
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 639 LMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/345 (44%), Positives = 225/345 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M++ EV ++R E ITV+G P+PI+ + + L + K G+ +PTPIQ Q P
Sbjct: 345 MSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIP 404
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q L +GEGPI +++ PTRELA+QI +E
Sbjct: 405 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKE 464
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A TNLRRVT
Sbjct: 465 CKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 524
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 525 YVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + QV+ V+ E +K+ +L++LL + ++IF + ++ D + +
Sbjct: 585 GRSVVCSDVEQQVI-VIEEEKKF-----LKLLELLGHYQESGSVIIFVDKQEHADGLLKD 638
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 639 LMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/345 (44%), Positives = 225/345 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M++ EV ++R E ITV+G P+PI+ + + L + K G+ +PTPIQ Q P
Sbjct: 345 MSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIP 404
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q L +GEGPI +++ PTRELA+QI +E
Sbjct: 405 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKE 464
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A TNLRRVT
Sbjct: 465 CKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 524
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 525 YVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + QV+ V+ E +K+ +L++LL + ++IF + ++ D + +
Sbjct: 585 GRSVVCSDVEQQVI-VIEEEKKF-----LKLLELLGHYQESGSVIIFVDKQEHADGLLKD 638
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 639 LMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/345 (44%), Positives = 225/345 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M++ EV ++R E ITV+G P+PI+ + + L + K G+ +PTPIQ Q P
Sbjct: 345 MSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIP 404
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q L +GEGPI +++ PTRELA+QI +E
Sbjct: 405 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKE 464
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A TNLRRVT
Sbjct: 465 CKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 524
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 525 YVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + QV+ V+ E +K+ +L++LL + ++IF + ++ D + +
Sbjct: 585 GRSVVCSDVEQQVI-VIEEEKKF-----LKLLELLGHYQESGSVIIFVDKQEHADGLLKD 638
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 639 LMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/345 (44%), Positives = 225/345 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M++ EV ++R E ITV+G P+PI+ + + L + K G+ +PTPIQ Q P
Sbjct: 345 MSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIP 404
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q L +GEGPI +++ PTRELA+QI +E
Sbjct: 405 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKE 464
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A TNLRRVT
Sbjct: 465 CKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 524
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 525 YVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + QV+ V+ E +K+ +L++LL + ++IF + ++ D + +
Sbjct: 585 GRSVVCSDVEQQVI-VIEEEKKF-----LKLLELLGHYQESGSVIIFVDKQEHADGLLKD 638
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 639 LMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 774 (277.5 bits), Expect = 2.6e-76, P = 2.6e-76
Identities = 161/350 (46%), Positives = 229/350 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M+E E R + I V G DVP+P++ + + L+VI KLGF T IQAQ P
Sbjct: 514 MSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIP 573
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRD+IG+A+TGSGKT+++L+P F H+ Q L EGPI L++ PTRELA QI ++
Sbjct: 574 AIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKD 633
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
F +R+ C YGGAP QI +L+RG EI++ TPGR+ID+L A TNLRRVT
Sbjct: 634 CKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVT 693
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ KI++ +RPDRQT+ +SAT+PR +E LAR+ L P ++++G
Sbjct: 694 YVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVG 753
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM-----DGSRILIFTETKKGCD 291
+ A + I Q+VEV E +K+ RL++LL + + +R LIF + ++ D
Sbjct: 754 GRSVVAPE-ITQIVEVCNEEKKF-----VRLLELLGNLYSTDENEDARSLIFVDRQEAAD 807
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ R+L G+P +SIHG K+Q +RD + +F++G P++ AT VAARGL
Sbjct: 808 TLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGL 857
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 154/345 (44%), Positives = 224/345 (64%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M+ EV ++R E ITV+G P+PI+ + + L + K G+ +PTPIQ Q P
Sbjct: 345 MSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIP 404
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q L +GEGPI +++ PTRELA+QI +E
Sbjct: 405 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKE 464
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF G+R C+YGG QI +L+RG EI++ TPGR+IDML A TNLRRVT
Sbjct: 465 CKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 524
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 525 YVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + QV+ V+ E +K+ +L++LL + ++IF + ++ D + +
Sbjct: 585 GRSVVCSDVEQQVI-VIEEEKKF-----LKLLELLGHYQESGSVIIFVDKQEHADGLLKD 638
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 639 LMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 157/346 (45%), Positives = 225/346 (65%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
MT+ EVK YR + ITV+G D P+PI+ + + + V+ K + +PT IQAQ P
Sbjct: 277 MTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIP 336
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRD+IGIA+TGSGKTL++LLP F H+ QP L +G+GPI ++LAPTRELA+Q +E
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
A KF G++ C YGG QI DL+RG EIV+ TPGR+ID+L A TNLRRVT
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVT 456
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
YLVLDEADRM D GFEPQI K+V IRPD+QT+ +SAT+PR +E LAR+ L P ++++G
Sbjct: 457 YLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVG 516
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + I Q + E +K+ +L++LL + ++F + ++ D + Q
Sbjct: 517 GKSVVCSD-ITQNAVICAEHQKF-----LKLLELLGMYYEEGSSIVFVDKQEKADDIVDQ 570
Query: 297 LRMDGWPALS-IHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L G+ +++ +HG +Q +RD +A+F++G ++ AT VAARGL
Sbjct: 571 LMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGL 616
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 757 (271.5 bits), Expect = 1.7e-74, P = 1.7e-74
Identities = 160/344 (46%), Positives = 224/344 (65%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MTETEV +R+ + + G D P+PI+ + +A + ++ K + +PT IQAQ P
Sbjct: 483 MTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPA 542
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
+ GRDLIGIA TGSGKTL++LLP F H+ AQP+ GEG I L+++PTRELA+QI E
Sbjct: 543 IMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVEC 602
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVTY 177
KF G+R+ C+YGGA QI +L+RG +IV+ TPGR+ID+L A + TNLRRVT+
Sbjct: 603 KKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTF 662
Query: 178 LVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
LVLDEADRM DMGF PQI IV IRPDRQT+ +SAT+P +VE +A++ L P ++I G
Sbjct: 663 LVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGG 722
Query: 238 LELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL 297
+ + I Q VEV ++ RLI+LL +ILIFT ++ D + RQL
Sbjct: 723 RSI-VSSDIEQFVEVRPTETRFR-----RLIELLSIWYHKGQILIFTNRQETTDNLYRQL 776
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ LS+HG K+Q++RD +++F++ I+ AT +A+RGL
Sbjct: 777 SNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGL 820
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 157/352 (44%), Positives = 231/352 (65%)
Query: 1 MTETEVKMYRA-----RREITVEGHD--VPRPIRIFQEANFPDY--CLEVIAKLGFVEPT 51
++E +V+++R R + EG +P+P F++A F Y ++ I + GF +PT
Sbjct: 167 LSEAQVEIWRKENFNIRCDDLTEGEKRPIPKPTCTFEDA-FQQYPEIMQSIRRAGFQKPT 225
Query: 52 PIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQP-RLVQGEGPIVLVLAPTR 110
PIQ+Q WP+ L+G DLIGIA+TG+GKTLSYL+P F+H+ +QP Q GP +LVL PTR
Sbjct: 226 PIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHIHSQPVSRKQRNGPGMLVLTPTR 285
Query: 111 ELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHT 170
ELA+Q++ E K+ + G++S CIYGG + QI+D+ +GV+I+IATPGRL D+
Sbjct: 286 ELALQVEAECSKYLYK-GLKSVCIYGGGNRKGQIQDVTKGVDIIIATPGRLNDLQMNNFV 344
Query: 171 NLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNP 230
NLR +TYLVLDEAD+MLD+GFE QI KI+ +RPDRQT+ +A+WP LA+ +L+ P
Sbjct: 345 NLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTVMTTASWPDSTRRLAQSYLKQP 404
Query: 231 YKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIK-LLKEVMDGSRILIFTETKKG 289
V +G+L+L ++ Q + V TE EK + L+K L+ + ++++F K
Sbjct: 405 MIVYVGTLDLVTVNTVKQNIIVTTEEEKRS------LVKEFLQSLSPKDKVIVFVSRKLV 458
Query: 290 CDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
D ++ L + G P S+HGD+ QS+RD L +FR+GR I+ ATD+AARGL
Sbjct: 459 ADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVKILIATDLAARGL 510
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 153/328 (46%), Positives = 223/328 (67%)
Query: 18 EGHDVPRPIRIFQEANFPDY--CLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGS 75
E +P PI F++A F Y ++ I K GF +PTPIQ+Q WP+ L+G DLIGIA+TG+
Sbjct: 214 EKRPIPNPICKFEDA-FGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGT 272
Query: 76 GKTLSYLLPAFVHVSAQPRLVQGE--GPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTC 133
GKTLSYL+P F+H+++QP + +G+ GP +LVL PTRELA+Q+ E K+ S G++S C
Sbjct: 273 GKTLSYLMPGFIHLNSQP-VSRGKRNGPGMLVLTPTRELALQVGAECSKY-SYKGLKSVC 330
Query: 134 IYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEP 193
IYGG + QI+D+ +GV+I+IATPGRL D+ NLR +TYLVLDEAD+MLD+GFE
Sbjct: 331 IYGGGNRKGQIQDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEH 390
Query: 194 QIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVV 253
QI KI+ +RPDRQT+ SATWP + LA +L+ P V +G+L+L A ++ Q + +
Sbjct: 391 QIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIIT 450
Query: 254 TEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQ 313
TE EK S+F + L+ + ++++F K D ++ L + G P S+HGD+ Q
Sbjct: 451 TEEEK-RSLFQ----EFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQ 505
Query: 314 SERDWVLAEFRSGRSPIMTATDVAARGL 341
S+R+ L +F++G+ I+ ATD+A+RGL
Sbjct: 506 SDRERALDDFKTGKVKILIATDLASRGL 533
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 153/328 (46%), Positives = 223/328 (67%)
Query: 18 EGHDVPRPIRIFQEANFPDY--CLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGS 75
E +P PI F++A F Y ++ I K GF +PTPIQ+Q WP+ L+G DLIGIA+TG+
Sbjct: 205 EKRPIPNPICKFEDA-FGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGT 263
Query: 76 GKTLSYLLPAFVHVSAQPRLVQGE--GPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTC 133
GKTLSYL+P F+H+++QP + +G+ GP +LVL PTRELA+Q+ E K+ S G++S C
Sbjct: 264 GKTLSYLMPGFIHLNSQP-VSRGKRNGPGMLVLTPTRELALQVGAECSKY-SYKGLKSVC 321
Query: 134 IYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEP 193
IYGG + QI+D+ +GV+I+IATPGRL D+ NLR +TYLVLDEAD+MLD+GFE
Sbjct: 322 IYGGGNRKGQIQDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEH 381
Query: 194 QIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVV 253
QI KI+ +RPDRQT+ SATWP + LA +L+ P V +G+L+L A ++ Q + +
Sbjct: 382 QIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIIT 441
Query: 254 TEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQ 313
TE EK S+F + L+ + ++++F K D ++ L + G P S+HGD+ Q
Sbjct: 442 TEEEK-RSLFQ----EFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQ 496
Query: 314 SERDWVLAEFRSGRSPIMTATDVAARGL 341
S+R+ L +F++G+ I+ ATD+A+RGL
Sbjct: 497 SDRERALDDFKTGKVKILIATDLASRGL 524
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 160/323 (49%), Positives = 216/323 (66%)
Query: 22 VPRPIRIFQEANFPDY--CLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTL 79
+P P+ F+EA F Y +E I ++GF +PTPIQ+Q WP+ L G DLIGIA+TG+GKTL
Sbjct: 272 IPNPVCTFEEA-FAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTL 330
Query: 80 SYLLPAFVHVSAQPR-LVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGA 138
+YLLP F+H+ QP + GP +LVL PTRELA+QI+ E K+ S G +S CIYGG
Sbjct: 331 AYLLPGFIHMDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKY-SYKGFKSICIYGGG 389
Query: 139 PKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKI 198
+ QI+ + GV+IVIATPGRL D+ + NLR +TYLVLDEADRMLDMGFEPQI KI
Sbjct: 390 DRNAQIKVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKI 449
Query: 199 VTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEK 258
+ IRPDRQT+ SATWP V LA+ +L++P V +G+L+L A ++ Q V V E EK
Sbjct: 450 ILDIRPDRQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEK 509
Query: 259 YNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDW 318
+ +F I + E +D ++LIF K D ++ L + G S+HGD+ Q +R+
Sbjct: 510 KDYVF--DFIHRM-EPLD--KVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREE 564
Query: 319 VLAEFRSGRSPIMTATDVAARGL 341
L +F+ GR I+ ATD+A+RGL
Sbjct: 565 ALQDFKDGRVRILVATDLASRGL 587
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 155/342 (45%), Positives = 219/342 (64%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ + +V+ R + V G P+P+ F F + ++ + K + +PTPIQAQ P
Sbjct: 243 LDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPT 302
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD+IGIA+TGSGKT +++ P +HV Q +L G+GPI L+LAPTREL++QI EA
Sbjct: 303 ALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGLILAPTRELSLQIYNEA 362
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
KFG + C YGG K Q + L +G EI++ATPGR+IDM++ + TNLRRVT+LVL
Sbjct: 363 KKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVL 422
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM MGFEPQ+R I +RPDRQ L +SAT+ + +E LAR L +P +++ G L
Sbjct: 423 DEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLN- 481
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+ANQ I Q V V +K+N + +C L+K L E GS +LIF K + V+ L +
Sbjct: 482 EANQDITQSVYVFPNPLQKWNWL-LCHLVKFLSE---GS-VLIFVTKKVDAETVSNNLLI 536
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L +HGD +Q++R+ V+ +F+ I+ ATDVAARGL
Sbjct: 537 KEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGL 578
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 158/342 (46%), Positives = 219/342 (64%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+TE +V R +I + G D+ P+ F F D L+ IAK PTPIQ Q P+
Sbjct: 279 LTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPI 338
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRDLI IA+TGSGKT +++ P+ H+ QP L +G+GPI L LAPTRELA QI E
Sbjct: 339 ALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRELAHQIYLET 398
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
LK+ +++T +YGG K Q ++L+ G EI++ATPGRLIDM++ + T L RV+YLVL
Sbjct: 399 LKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVL 458
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEAD+M D GF PQ+ IV +RPDRQTL +SAT+ VE AR L +P K+ IG +
Sbjct: 459 DEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTILSDPIKISIGMIG- 517
Query: 241 KANQSINQVVEVV-TEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
AN I Q+V+V+ ++++K+N ++ + LL + GS +LIF TK +Q++ L
Sbjct: 518 SANSDITQIVQVLKSDSDKWN--WLTNQLALL--LSQGS-VLIFVSTKVAVEQLSSNLTK 572
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
G+ ++HGDKNQ ER + F+ G+ I+ ATDVAARGL
Sbjct: 573 FGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGL 614
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 155/348 (44%), Positives = 222/348 (63%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
++ EV RA + I + G D P+P+ + + + VI LG+ +PT IQAQ P
Sbjct: 391 LSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIP 450
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
GRD+IG+A+TGSGKT+++LLP F H+ Q L GEGPI +++ PTRELAVQI E
Sbjct: 451 AITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRE 510
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
F IR+ C YGGAP QI DL+RG EIV+ TPGR+ID+L A TNL R T
Sbjct: 511 CKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCT 570
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
YLVLDEADRM D+GFEPQ+ +I+ IRPDRQT+ +SAT+PR +E LAR+ L+ P ++ +G
Sbjct: 571 YLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVG 630
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS---RILIFTETKKGCDQV 293
+ A++ + Q+VEV E K++ RL++LL E+ + R L+F + ++ D +
Sbjct: 631 GRSVVASE-VEQIVEVRPEESKFS-----RLLELLGELYNNQLDVRTLVFVDRQESADAL 684
Query: 294 TRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L G+ + SIHG K+Q +RD ++++++G ++ AT V ARGL
Sbjct: 685 LSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGL 732
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 150/327 (45%), Positives = 215/327 (65%)
Query: 18 EGHDVPRPIRIFQEAN--FPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGS 75
E +P P F +A +P+ +E I K GF +PTPIQ+Q WP+ L+G DLIG+A+TG+
Sbjct: 232 EKRPIPNPTCTFDDAFQCYPEV-MENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGT 290
Query: 76 GKTLSYLLPAFVHVSAQPRLV-QGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCI 134
GKTL YL+P F+H+ QP L Q P +LVL PTRELA+Q++ E K+ S G+RS C+
Sbjct: 291 GKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKY-SYKGLRSVCV 349
Query: 135 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQ 194
YGG + QI +L++GV+I+IATPGRL D+ + NL+ +TYLVLDEAD+MLDMGFEPQ
Sbjct: 350 YGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQ 409
Query: 195 IRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVT 254
I KI+ +RPDRQT+ SATWP V LA+ +L+ P V +G+L+L A S+ Q + V T
Sbjct: 410 IMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTT 469
Query: 255 EAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQS 314
E EK++ M L+ + ++++F K D ++ L + S+HGD+ Q
Sbjct: 470 EEEKWSHMQT-----FLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQR 524
Query: 315 ERDWVLAEFRSGRSPIMTATDVAARGL 341
+R+ L F++G+ I+ ATD+A+RGL
Sbjct: 525 DREKALENFKTGKVRILIATDLASRGL 551
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 738 (264.8 bits), Expect = 4.7e-73, P = 4.7e-73
Identities = 148/345 (42%), Positives = 222/345 (64%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M+ EV YR E I+V+G P+PI+ + + L + K + +PTPIQAQ P
Sbjct: 330 MSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIP 389
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRDLIGIA+TGSGKT+++LLP F H+ Q + + EGP+ +++ PTRELA+QI +E
Sbjct: 390 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITKE 449
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
KF +R C+YGG QI +L+RG EI++ TPGR+IDML A + TNLRRVT
Sbjct: 450 CKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVT 509
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+V+DEADRM DMGFEPQ+ +IV +RPDRQT+ +SAT+PR +E LAR+ L P +V +G
Sbjct: 510 YVVIDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVG 569
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ + + Q V V+ E +K+ +L+++L + ++IF + ++ D + +
Sbjct: 570 GRSVVCSD-VEQHVIVIEEEKKF-----LKLLEILGHYQEKGSVIIFVDKQEHADGLLKD 623
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +P +S+HG +Q +RD ++ +F++G ++ AT VAARGL
Sbjct: 624 LMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGL 668
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 150/341 (43%), Positives = 213/341 (62%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T EV R + + V G P+P F F + + I K + +PTPIQ QG P+
Sbjct: 231 LTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPI 290
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD IGIA+TGSGKT +++ P VH+ Q L GEGPI +++ PTREL QI E
Sbjct: 291 ALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEPGEGPIAVIVCPTRELCQQIHAEC 350
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG G+RS +YGG Q + L+ G EIV+ TPGRLID ++ + T+L+RVT+LV
Sbjct: 351 KRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTFLVF 410
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 411 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIG- 469
Query: 241 KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD 300
+AN+ I Q+VEV+ + RL++ GS +L+F K C+++ L +
Sbjct: 470 EANEDITQIVEVLQSGQDKWGWLTRRLVEFTSA---GS-VLVFVTKKANCEELATNLIQE 525
Query: 301 GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
G+ +HGD +QSER+ V+A+F+ P++ ATDVAARGL
Sbjct: 526 GYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGL 566
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 159/352 (45%), Positives = 225/352 (63%)
Query: 1 MTETEVKMYRARREITV-----EGHD--VPRPIRIFQEA--NFPDYCLEVIAKLGFVEPT 51
M+ EV+++R + EG +P P+ F++ +PD I K GF +PT
Sbjct: 206 MSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFEQYPDIMAN-IRKTGFQKPT 264
Query: 52 PIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQP--RLVQGEGPIVLVLAPT 109
PIQ+Q WP+ L+G DLIGIA+TG+GKTL+YL+P F+H+++QP + +G GP +LVLAPT
Sbjct: 265 PIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPKDKRG-GPGMLVLAPT 323
Query: 110 RELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH 169
RELA+Q++ E LK+ + G +S CIYGG + QI + +GV+IVIATPGRL D+
Sbjct: 324 RELALQVEAECLKYTYK-GFKSICIYGGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNF 382
Query: 170 TNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRN 229
NL+ +TYL +EADRMLDMGFEPQI KI+ +RPDRQT+ SATWP V LA+ +LRN
Sbjct: 383 INLKSITYLA-NEADRMLDMGFEPQIMKILIDVRPDRQTVMMSATWPDGVRRLAKSYLRN 441
Query: 230 PYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKG 289
P V +G+L+L A ++ Q V V+ E EK F+ I +K + +IF K
Sbjct: 442 PMIVYVGTLDLAAVNTVEQKVIVINEEEK--KAFMENFIDSMKPK---DKAIIFVGKKST 496
Query: 290 CDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
D + L + G P S+HGD+ Q +R+ L +F+ G+ I+ ATD+A+RGL
Sbjct: 497 ADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLASRGL 548
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 521 (188.5 bits), Expect = 4.6e-72, Sum P(2) = 4.6e-72
Identities = 104/211 (49%), Positives = 146/211 (69%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ + +++R IT +G +P PIR +++++ P + LEVI K G+ EPTPIQ Q P+
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQI 116
L+ RD+IG+AETGSGKT ++L+P V ++ P++ + E GP ++LAPTRELA QI
Sbjct: 424 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQI 483
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+EE +KFG GIR+ + GG + Q LR G EIVIATPGRLID+LE ++ L R T
Sbjct: 484 EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT 543
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
Y+VLDEADRM+DMGFEP ++KI+ + Q
Sbjct: 544 YVVLDEADRMIDMGFEPDVQKILEHMPVSNQ 574
Score = 236 (88.1 bits), Expect = 4.6e-72, Sum P(2) = 4.6e-72
Identities = 53/136 (38%), Positives = 83/136 (61%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ ++AT P VE LAR +LR P V IGS K ++ + Q V +++E+EK
Sbjct: 599 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRK----- 652
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
+L+ +L++ D I+IF KKGCD + + L G+ A ++HG K Q +R++ L+ ++
Sbjct: 653 KLLAILEQGFDPP-IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKA 711
Query: 326 GRSPIMTATDVAARGL 341
G I+ ATDVA RG+
Sbjct: 712 GAKDILVATDVAGRGI 727
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 521 (188.5 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 104/211 (49%), Positives = 146/211 (69%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ + +++R IT +G +P PIR +++++ P + LEVI K G+ EPTPIQ Q P+
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQI 116
L+ RD+IG+AETGSGKT ++L+P V ++ P++ + E GP ++LAPTRELA QI
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQI 484
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+EE +KFG GIR+ + GG + Q LR G EIVIATPGRLID+LE ++ L R T
Sbjct: 485 EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT 544
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
Y+VLDEADRM+DMGFEP ++KI+ + Q
Sbjct: 545 YVVLDEADRMIDMGFEPDVQKILEHMPVSNQ 575
Score = 236 (88.1 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 53/136 (38%), Positives = 83/136 (61%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ ++AT P VE LAR +LR P V IGS K ++ + Q V +++E+EK
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRK----- 653
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
+L+ +L++ D I+IF KKGCD + + L G+ A ++HG K Q +R++ L+ ++
Sbjct: 654 KLLAILEQGFDPP-IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKA 712
Query: 326 GRSPIMTATDVAARGL 341
G I+ ATDVA RG+
Sbjct: 713 GAKDILVATDVAGRGI 728
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 521 (188.5 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 104/211 (49%), Positives = 146/211 (69%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ + +++R IT +G +P PIR +++++ P + LEVI K G+ EPTPIQ Q P+
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQI 116
L+ RD+IG+AETGSGKT ++L+P V ++ P++ + E GP ++LAPTRELA QI
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQI 484
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+EE +KFG GIR+ + GG + Q LR G EIVIATPGRLID+LE ++ L R T
Sbjct: 485 EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT 544
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
Y+VLDEADRM+DMGFEP ++KI+ + Q
Sbjct: 545 YVVLDEADRMIDMGFEPDVQKILEHMPVSNQ 575
Score = 236 (88.1 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 53/136 (38%), Positives = 83/136 (61%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ ++AT P VE LAR +LR P V IGS K ++ + Q V +++E+EK
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRK----- 653
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
+L+ +L++ D I+IF KKGCD + + L G+ A ++HG K Q +R++ L+ ++
Sbjct: 654 KLLAILEQGFDPP-IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKA 712
Query: 326 GRSPIMTATDVAARGL 341
G I+ ATDVA RG+
Sbjct: 713 GAKDILVATDVAGRGI 728
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 521 (188.5 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 104/211 (49%), Positives = 146/211 (69%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ + +++R IT +G +P PIR +++++ P + LEVI K G+ EPTPIQ Q P+
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQI 116
L+ RD+IG+AETGSGKT ++L+P V ++ P++ + E GP ++LAPTRELA QI
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQI 484
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+EE +KFG GIR+ + GG + Q LR G EIVIATPGRLID+LE ++ L R T
Sbjct: 485 EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT 544
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
Y+VLDEADRM+DMGFEP ++KI+ + Q
Sbjct: 545 YVVLDEADRMIDMGFEPDVQKILEHMPVSNQ 575
Score = 236 (88.1 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 53/136 (38%), Positives = 83/136 (61%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ ++AT P VE LAR +LR P V IGS K ++ + Q V +++E+EK
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRK----- 653
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
+L+ +L++ D I+IF KKGCD + + L G+ A ++HG K Q +R++ L+ ++
Sbjct: 654 KLLAILEQGFDPP-IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKA 712
Query: 326 GRSPIMTATDVAARGL 341
G I+ ATDVA RG+
Sbjct: 713 GAKDILVATDVAGRGI 728
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 161/355 (45%), Positives = 229/355 (64%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIA-KLGFVEPTPIQAQGW 58
+++ +V++ R + I V+G DVPRPI + P VI KL F +P+ IQ+Q
Sbjct: 266 LSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQAL 325
Query: 59 PMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQE 118
P L GRD+IGIA+TGSGKTLSY+LP H+ Q +GPI L+L+PTRELA+QI++
Sbjct: 326 PTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEK 385
Query: 119 EALKFGSRAG-IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRR 174
E L F R +R C YGG+ QI +L++GVEI++ TPGR+ID+L A NL+R
Sbjct: 386 EILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKR 445
Query: 175 VTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVI 234
T++VLDEADRM D+GFEPQ+ KI+TQIRPDRQT+ +SAT+PR++ETLA+Q L +P +I
Sbjct: 446 CTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVII 505
Query: 235 IGSLELKANQSINQVVEVVTEAE---KYNSMFICRLIKLLKEVM---DGSRILIFTETKK 288
+G + + A + +VV T AE KY + +L +L S+IL+FTE +
Sbjct: 506 VGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQN 565
Query: 289 GCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPI--MTATDVAARGL 341
D++ L + +PA++IHG K+Q +R + + EF S S I + AT +AARGL
Sbjct: 566 DADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGL 620
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 161/355 (45%), Positives = 229/355 (64%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFPDYCLEVIA-KLGFVEPTPIQAQGW 58
+++ +V++ R + I V+G DVPRPI + P VI KL F +P+ IQ+Q
Sbjct: 266 LSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQAL 325
Query: 59 PMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQE 118
P L GRD+IGIA+TGSGKTLSY+LP H+ Q +GPI L+L+PTRELA+QI++
Sbjct: 326 PTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEK 385
Query: 119 EALKFGSRAG-IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRR 174
E L F R +R C YGG+ QI +L++GVEI++ TPGR+ID+L A NL+R
Sbjct: 386 EILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKR 445
Query: 175 VTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVI 234
T++VLDEADRM D+GFEPQ+ KI+TQIRPDRQT+ +SAT+PR++ETLA+Q L +P +I
Sbjct: 446 CTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVII 505
Query: 235 IGSLELKANQSINQVVEVVTEAE---KYNSMFICRLIKLLKEVM---DGSRILIFTETKK 288
+G + + A + +VV T AE KY + +L +L S+IL+FTE +
Sbjct: 506 VGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQN 565
Query: 289 GCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPI--MTATDVAARGL 341
D++ L + +PA++IHG K+Q +R + + EF S S I + AT +AARGL
Sbjct: 566 DADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGL 620
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 145/341 (42%), Positives = 217/341 (63%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T ++ R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 227 LTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 286
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 287 ALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEC 346
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RV+YLV
Sbjct: 347 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVF 406
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 407 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 465
Query: 241 KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD 300
+AN+ + Q+VE++ K+N ++ R +L++ GS +L+F K +++ L+ +
Sbjct: 466 EANEDVTQIVEILHSGSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQE 520
Query: 301 GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
G +HGD +QSER+ V+++F+ P++ ATDVAARGL
Sbjct: 521 GHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 561
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 154/352 (43%), Positives = 227/352 (64%)
Query: 1 MTETEVKMYRARREITV-----EGHD--VPRPIRIFQEA--NFPDYCLEVIAKLGFVEPT 51
M+ EV+++R + EG +P P+ F++ +PD I K GF +PT
Sbjct: 19 MSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFEQYPDIMAN-IRKTGFQKPT 77
Query: 52 PIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQP--RLVQGEGPIVLVLAPT 109
PIQ+Q WP+ L+G DLIGIA+TG+GKTL+YL+P F+H+++QP + +G GP +LVLAPT
Sbjct: 78 PIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPKDKRG-GPGMLVLAPT 136
Query: 110 RELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH 169
RELA+Q++ E LK+ + G +S CIYGG + QI + +GV+IVIATPGRL D+
Sbjct: 137 RELALQVEAECLKYTYK-GFKSICIYGGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNF 195
Query: 170 TNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRN 229
NL+ +TYLVLDEADRMLDMGFEPQI KI+ +RPDRQT+ SATWP V LA+ +LRN
Sbjct: 196 INLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMMSATWPDGVRRLAKSYLRN 255
Query: 230 PYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKG 289
P V +G+L+L +++ VV + +K +F + +++ + +++F +
Sbjct: 256 PMIVYVGTLDL----AVSGVVLKYLQFDK--DIFTWKYMQVNAQSFCTDVVVVFVQLHVV 309
Query: 290 CDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
D + L + G P S+HGD+ Q +R+ L +F+ G+ I+ ATD+A+RGL
Sbjct: 310 ADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLASRGL 361
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 147/342 (42%), Positives = 215/342 (62%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T +V R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 229 LTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 288
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
A+ GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 289 AMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSEC 348
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RVTYLV
Sbjct: 349 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVF 408
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 409 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 467
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+AN+ + Q+VE+ K+N ++ R +L++ GS +L+F K +++ L+
Sbjct: 468 EANEDVTQIVEIFPSGPSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQ 522
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ +HGD +QSER+ V++EF+ PI+ ATDVAARGL
Sbjct: 523 EDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGL 564
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 147/342 (42%), Positives = 215/342 (62%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T +V R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 222 LTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 281
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
A+ GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 282 AMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSEC 341
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RVTYLV
Sbjct: 342 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVF 401
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 402 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 460
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+AN+ + Q+VE+ K+N ++ R +L++ GS +L+F K +++ L+
Sbjct: 461 EANEDVTQIVEIFPSGPSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQ 515
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ +HGD +QSER+ V++EF+ PI+ ATDVAARGL
Sbjct: 516 EDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGL 557
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 147/342 (42%), Positives = 215/342 (62%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T +V R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 227 LTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 286
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
A+ GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 287 AMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSEC 346
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RVTYLV
Sbjct: 347 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVF 406
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 407 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 465
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+AN+ + Q+VE+ K+N ++ R +L++ GS +L+F K +++ L+
Sbjct: 466 EANEDVTQIVEIFPSGPSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQ 520
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ +HGD +QSER+ V++EF+ PI+ ATDVAARGL
Sbjct: 521 EDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGL 562
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 690 (248.0 bits), Expect = 8.2e-71, Sum P(2) = 8.2e-71
Identities = 139/291 (47%), Positives = 194/291 (66%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ V YR E+ V G DVPRPI+ + + L+ + KL + +P PIQAQ P+
Sbjct: 370 MTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPI 429
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
+ GRD IG+A+TGSGKTL ++LP H+ QP + G+GPI LV+APTREL QI +
Sbjct: 430 IMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDI 489
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDML---EAQHTNLRRVTY 177
KF GI +YGG+ QI +L+RG EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 490 RKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 549
Query: 178 LVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
LV+DEADRM DMGFEPQI +IV IRPDRQT+ +SAT+PR+VETLAR+ L P ++ +G
Sbjct: 550 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGG 609
Query: 238 LELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKK 288
+ N+ I Q+VE+ E+E+++ RL++LL E + ++L+F +++
Sbjct: 610 RSV-VNKDITQLVEIRPESERFS-----RLLELLGEWYEKGKVLVFVRSQE 654
Score = 49 (22.3 bits), Expect = 8.2e-71, Sum P(2) = 8.2e-71
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 320 LAEFRSGRSPIMTATDVAARGL 341
+++F+S ++ AT VAARGL
Sbjct: 657 ISDFKSDVCNLLIATSVAARGL 678
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 527 (190.6 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 106/237 (44%), Positives = 161/237 (67%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M++ + +++R I+++G VPRP+R ++EA FPD + + ++G++EPTPIQ Q P+
Sbjct: 275 MSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPI 334
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQI 116
L+ RD+IG+AETGSGKT ++LLP V +++ P++ + E GP +++APTRELA QI
Sbjct: 335 GLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQI 394
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+EE KFG GI++ + GGA + Q LR GVE+VIATPGRL+D+LE ++ L + T
Sbjct: 395 EEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCT 454
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQF-LRNPYK 232
Y++LDEADRMLDMGFEP ++K++ + PD + + E E L + F R Y+
Sbjct: 455 YVILDEADRMLDMGFEPDVQKVL-EYMPDTNMKKDTDEFDNE-EALMKGFSTREKYR 509
Score = 208 (78.3 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 51/136 (37%), Positives = 76/136 (55%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ ++AT +E LARQ+LR P V IGS K + + QVV +V E K
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAG-KPTERVEQVVYMVPEDRKRK----- 562
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
+L+++L+ I+IF KKG D +++ L G+ +HG K Q +R++ L +
Sbjct: 563 KLVEVLESQFQPP-IIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKE 621
Query: 326 GRSPIMTATDVAARGL 341
G S I+ ATDVA RG+
Sbjct: 622 GTSDILVATDVAGRGI 637
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 523 (189.2 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 104/216 (48%), Positives = 149/216 (68%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MTE + +++R +T++G +P PIR + E+ FP +++I K+G+ EPTPIQ Q P+
Sbjct: 368 MTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPI 427
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQI 116
L+ RD+IG+AETGSGKTL++L+P + + P++ + E GP +++APTRELA QI
Sbjct: 428 GLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQI 487
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+EE KFG GIR+ + GG + Q LR G EIVIATPGRLID+LE ++ L + T
Sbjct: 488 EEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCT 547
Query: 177 YLVLDEADRMLDMGFEPQIRKI-----VTQIRPDRQ 207
Y+VLDEADRM+DMGFEP ++KI VT ++PD +
Sbjct: 548 YIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTE 583
Score = 220 (82.5 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 51/136 (37%), Positives = 80/136 (58%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ ++AT P VE LAR +LR P V IGS+ K + Q+V ++ E +K
Sbjct: 602 RQTVMFTATMPPAVERLARTYLRRPATVYIGSVG-KPTERTEQIVYMMGENDKRK----- 655
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
+L+++L +D ++IF KKG D + + L G+ + ++HG K Q +R++ LA +S
Sbjct: 656 KLMEILSRKIDPP-VIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKS 714
Query: 326 GRSPIMTATDVAARGL 341
G I+ ATDVA RG+
Sbjct: 715 GAKDILVATDVAGRGI 730
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 145/342 (42%), Positives = 217/342 (63%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T ++ R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 227 LTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 286
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 287 ALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEC 346
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RV+YLV
Sbjct: 347 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVF 406
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 407 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 465
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+AN+ + Q+VE++ K+N ++ R +L++ GS +L+F K +++ L+
Sbjct: 466 EANEDVTQIVEILHSGPSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQ 520
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+G +HGD +QSER+ V+++F+ P++ ATDVAARGL
Sbjct: 521 EGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 562
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 145/342 (42%), Positives = 217/342 (63%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T ++ R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 227 LTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 286
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 287 ALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEC 346
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RV+YLV
Sbjct: 347 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVF 406
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 407 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 465
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+AN+ + Q+VE++ K+N ++ R +L++ GS +L+F K +++ L+
Sbjct: 466 EANEDVTQIVEILHSGPSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQ 520
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+G +HGD +QSER+ V+++F+ P++ ATDVAARGL
Sbjct: 521 EGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 562
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 145/342 (42%), Positives = 217/342 (63%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T ++ R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 227 LTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 286
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 287 ALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEG 346
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RV+YLV
Sbjct: 347 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVF 406
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 407 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 465
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+AN+ + Q+VE++ K+N ++ R +L++ GS +L+F K +++ L+
Sbjct: 466 EANEDVTQIVEILHSGPSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQ 520
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+G +HGD +QSER+ V+++F+ P++ ATDVAARGL
Sbjct: 521 EGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 562
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 146/327 (44%), Positives = 213/327 (65%)
Query: 18 EGHDVPRPIRIFQEAN--FPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGS 75
E +P P F++A +P+ + I K GF +PTPIQ+Q WP+ L+G DLIG+A+TG+
Sbjct: 231 EKRPLPNPTCNFEDAFHCYPEV-MRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGT 289
Query: 76 GKTLSYLLPAFVHVSAQPRLVQGE-GPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCI 134
GKTLSYL+P F+H+ +QP L + GP +LVL PTRELA+Q+ E ++ R G++S CI
Sbjct: 290 GKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYR-GLKSVCI 348
Query: 135 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQ 194
YGG + QI+DL +G +I+IATPGRL D+ L+ +TYLVLDEAD+MLDMGFEPQ
Sbjct: 349 YGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQ 408
Query: 195 IRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVT 254
I KI+ +RPDRQT+ SATWP V LA+ +L+ P V +G+L+L A ++ Q + V T
Sbjct: 409 IMKILLDVRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTT 468
Query: 255 EAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQS 314
E EK + + + + +++IF K D ++ L + S+HG++ QS
Sbjct: 469 EDEKRS-----HIQAFIDSMSPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQS 523
Query: 315 ERDWVLAEFRSGRSPIMTATDVAARGL 341
+R+ L F++G+ I+ ATD+A+RGL
Sbjct: 524 DRERALKSFKTGKVRILIATDLASRGL 550
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 145/342 (42%), Positives = 217/342 (63%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T ++ R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 227 LTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 286
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 287 ALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEC 346
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RV+YLV
Sbjct: 347 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVF 406
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 407 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 465
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+AN+ + Q+VE++ K+N ++ R +L++ GS +L+F K +++ L+
Sbjct: 466 EANEDVTQIVEILHSGPSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELASNLKQ 520
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+G +HGD +QSER+ V+++F+ P++ ATDVAARGL
Sbjct: 521 EGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 562
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 145/342 (42%), Positives = 216/342 (63%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+T ++ R + + V G PRP F F + + I K + +PTPIQ QG P+
Sbjct: 227 LTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPV 286
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
AL GRD+IGIA+TGSGKT +++ P +H+ Q L G+GPI +++ PTREL QI E
Sbjct: 287 ALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEC 346
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
+FG +RS +YGG Q + L+ G EIV+ TPGRLID ++ + TNL+RV+YLV
Sbjct: 347 KRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVF 406
Query: 181 DEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
DEADRM DMGFE Q+R I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G +
Sbjct: 407 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG- 465
Query: 241 KANQSINQVVEVVTEA-EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+AN+ + Q+VE++ K+N ++ R +L++ GS +L+F K +++ L+
Sbjct: 466 EANEDVTQIVEILHSGPSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQ 520
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+G +HGD +QSER+ V+ +F+ P++ ATDVAARGL
Sbjct: 521 EGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVATDVAARGL 562
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 143/326 (43%), Positives = 210/326 (64%)
Query: 17 VEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSG 76
V G PRP F F + + I K + +PTPIQ QG P+AL GRD+IGIA+TGSG
Sbjct: 243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSG 302
Query: 77 KTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYG 136
KT +++ P +H+ Q L G+GPI +++ PTREL QI E +FG +RS +YG
Sbjct: 303 KTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYG 362
Query: 137 GAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIR 196
G Q + L+ G EIV+ TPGRLID ++ + TNL+RV+YLV DEADRM DMGFE Q+R
Sbjct: 363 GGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVR 422
Query: 197 KIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEA 256
I + +RPDRQTL +SAT+ +++E LAR L +P +V+ G + +AN+ + Q+VE++
Sbjct: 423 SIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQIVEILHSG 481
Query: 257 -EKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSE 315
K+N ++ R +L++ GS +L+F K +++ L+ +G +HGD +QSE
Sbjct: 482 PSKWN--WLTR--RLVEFTSSGS-VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
Query: 316 RDWVLAEFRSGRSPIMTATDVAARGL 341
R+ V+++F+ P++ ATDVAARGL
Sbjct: 537 RNKVISDFKKKDIPVLVATDVAARGL 562
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 143/323 (44%), Positives = 211/323 (65%)
Query: 22 VPRPIRIFQEA--NFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTL 79
+P+P F++A +PD L+ I ++G V+PTPIQ+Q WP+ L+G DLI +A+TG+GKTL
Sbjct: 216 IPKPTCRFKDAFQQYPDL-LKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTL 274
Query: 80 SYLLPAFVHVSAQP-RLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGA 138
SYL+P F+H+ +QP Q GP +LVL PTRELA+ ++ E K+ S G++S CIYGG
Sbjct: 275 SYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKY-SYKGLKSICIYGGR 333
Query: 139 PKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKI 198
+ QI D+ +GV+I+IATPGRL D+ NLR +TYLV+DEAD+MLDM FEPQIRKI
Sbjct: 334 NRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKI 393
Query: 199 VTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEK 258
+ +RPDRQT+ SATWP V LA +L++P V +G+L L A ++ Q + V TE EK
Sbjct: 394 LLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEK 453
Query: 259 YNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDW 318
+ ++ + ++++F K D ++ + G A S+HG+ QS+++
Sbjct: 454 R-----ALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQER 508
Query: 319 VLAEFRSGRSPIMTATDVAARGL 341
+ +F+SG I+ TD+ +RGL
Sbjct: 509 AVEDFKSGNIKILITTDIVSRGL 531
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 146/330 (44%), Positives = 215/330 (65%)
Query: 18 EGHDVPRPIRIFQEAN--FPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGS 75
E +P P F++A +P+ + I K GF +PTPIQ+Q WP+ L+G DLIG+A+TG+
Sbjct: 231 EKRPIPNPACKFEDAFQCYPEVMIN-IKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGT 289
Query: 76 GKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQIQEEALKFGSRAGIRS 131
GKTLSYL+P F+HV +QP + + GP +LVL PTRELA+Q++ E K+ S G++S
Sbjct: 290 GKTLSYLMPGFIHVDSQPVVFSLQRARNGPGMLVLTPTRELALQVEAECSKY-SYKGLKS 348
Query: 132 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGF 191
C+YGG + QI+DL +GV+I+IATPGRL D+ L+ ++YLVLDEAD+MLDMGF
Sbjct: 349 VCVYGGGDRDGQIKDLLKGVDIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGF 408
Query: 192 EPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVE 251
EPQI KI+ IRPDRQT+ SATWP V LA+ +L+ P V +G+L+L A ++ Q +
Sbjct: 409 EPQIMKILLDIRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNII 468
Query: 252 VVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDK 311
V TE EK + + ++ + +++IF K D ++ L + S+HG++
Sbjct: 469 VTTEDEKRS-----HIQTFIESMSPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNR 523
Query: 312 NQSERDWVLAEFRSGRSPIMTATDVAARGL 341
Q +R+ L F++G+ I+ ATD+A+RGL
Sbjct: 524 EQGDRERALKNFKTGKVRILIATDLASRGL 553
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 151/323 (46%), Positives = 213/323 (65%)
Query: 26 IRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPA 85
++ F E+N P+ L+ F +P+PIQ+ WP L GRDLIGIA+TGSGKTL++ +PA
Sbjct: 115 LKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172
Query: 86 FVHVSAQPRLVQGEG----PIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKG 141
+HV + + + G P LVL+PTRELAVQI + + G G++S C+YGG+ KG
Sbjct: 173 IMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKG 232
Query: 142 PQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQ 201
PQI +R GV+IVI TPGRL D++E+ L V+++VLDEADRMLDMGFE +R I++
Sbjct: 233 PQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSN 292
Query: 202 IRPDRQTLYWSATWPREVETLARQFLR-NPYKVIIGSLELKANQSINQVVEVVTEAEKYN 260
RQ + +SATWP +V LA++F+ NP KVIIGS++L AN + Q++EV+ E +
Sbjct: 293 TNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQ 352
Query: 261 SMFICRLIKLLKEVMDG--SRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDW 318
RLI LL++ +R+L+F K +++ R L+ GW A+SIHG+K QSER
Sbjct: 353 -----RLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTR 407
Query: 319 VLAEFRSGRSPIMTATDVAARGL 341
L+ F+ G P++ ATDVAARGL
Sbjct: 408 SLSLFKEGSCPLLVATDVAARGL 430
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 546 (197.3 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 110/239 (46%), Positives = 160/239 (66%)
Query: 104 LVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 163
L+L PTREL +Q+ +E F I+S +YGG PK QI +L++G +I++ATPGRL+D
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 490
Query: 164 MLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLA 223
LE + NL + Y+V+DEADR+LDMGFE Q+RKI+TQ+ ++Q L+ +ATWP +V LA
Sbjct: 491 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKLA 550
Query: 224 RQFLR-NPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILI 282
F +P K+ IG EL AN++I Q V + + + +L+ LKE + ++ILI
Sbjct: 551 YDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKK-----KLLDWLKENYENNKILI 605
Query: 283 FTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
F +TK+ CD + ++LR + ALSIHGDK Q ERD +L +++ R I+ ATDVA+RGL
Sbjct: 606 FCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVASRGL 664
Score = 167 (63.8 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 34 FPDYCLE--VIAKLG--FVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHV 89
F D C ++ L F EPT IQ WP+AL G+DLIG+AETGSGKTL+++LP F+H+
Sbjct: 290 FSDVCFHESILNYLNNKFSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPCFMHI 349
Query: 90 SAQPRLVQ 97
++Q
Sbjct: 350 LKHKEIIQ 357
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 141/323 (43%), Positives = 215/323 (66%)
Query: 22 VPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSY 81
+P+PI + F ++K F +PTP+Q+ GWP+AL G D++GI++TGSGKTLS+
Sbjct: 135 LPKPIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSF 193
Query: 82 LLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKG 141
+LPA H+ AQPR GP VLV+APTRELA QI +EA ++ I IYGGAP+
Sbjct: 194 ILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRR 253
Query: 142 PQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQ 201
Q L R +IV+ TPGR+ID +E+ +L+ +++LV+DEADR+++MGFE QI I
Sbjct: 254 SQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNS 313
Query: 202 IRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVV-TEAEKYN 260
IRPDRQ LYWSATWP++V + A + +R P ++ IGS +L AN++I+Q ++V T+A+K +
Sbjct: 314 IRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVD 373
Query: 261 SMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL--SIHGDKNQSERDW 318
++ + + + ++ LIFT TKKG D + ++ +G ++HGD +Q+ R+
Sbjct: 374 ALM--DTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRER 431
Query: 319 VLAEFRSGRSPIMTATDVAARGL 341
++ +F++ R I+ ATDVA+RGL
Sbjct: 432 IVQDFKNKRLDIVVATDVASRGL 454
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 153/354 (43%), Positives = 220/354 (62%)
Query: 3 ETEVKMYRARREITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
E V + A +I +E G +VP P+ F E + + I + +V+PTP+Q P+
Sbjct: 120 ENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPI 179
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFV------HVSAQPRLVQGEGPIVLVLAPTRELAV 114
GRDL+ A+TGSGKT ++ P H+ +PR V+G P+ ++L+PTRELA
Sbjct: 180 LAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIE-RPRGVRGVYPLAVILSPTRELAC 238
Query: 115 QIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRR 174
QI +EA KF + G++ YGG P QIR+L RGV+I++ATPGRL D+LE +L+
Sbjct: 239 QIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQM 298
Query: 175 VTYLVLDEADRMLDMGFEPQIRKIVTQI-RPD---RQTLYWSATWPREVETLARQFLRNP 230
V +L LDEADRMLDMGFEPQIRKIV Q+ P RQT+ +SAT+PRE++ LA FL N
Sbjct: 299 VRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNY 358
Query: 231 YKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSR---ILIFTETK 287
+ +G + + I Q VE V +++K + + L+ +E + + L+F ETK
Sbjct: 359 IFLAVGRVG-SSTDLIVQRVEFVHDSDKRSHLM--DLLHAQRENGNQGKQALTLVFVETK 415
Query: 288 KGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
KG D + L ++G+PA +IHGD++Q ER+ L F++GR+PI+ ATDVAARGL
Sbjct: 416 KGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGL 469
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 148/347 (42%), Positives = 216/347 (62%)
Query: 9 YRARREITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRD 66
+ A +I +E G +VP P+ F E + + I + +V+PTP+Q P+ L+GRD
Sbjct: 139 FDAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRD 198
Query: 67 LIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEG-----PIVLVLAPTRELAVQIQEEAL 121
L+ A+TGSGKT ++ P + + + G P+ ++L+PTRELA QI +EA
Sbjct: 199 LMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAK 258
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KF + G++ YGG P Q+R+L RGV+I++ATPGRL D+LE +++ + +L LD
Sbjct: 259 KFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALD 318
Query: 182 EADRMLDMGFEPQIRKIVTQI----RPDRQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
EADRMLDMGFEPQIRKIV Q+ R RQTL +SAT+PRE++ LA FL N + +G
Sbjct: 319 EADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGR 378
Query: 238 LELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEV-MDGSRIL--IFTETKKGCDQVT 294
+ + I Q VE V +++K + + L+ +E + G + L +F ETK+G D +
Sbjct: 379 VG-SSTDLIVQRVEFVLDSDKRSHLM--DLLHAQRENGIQGKQALTLVFVETKRGADSLE 435
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L ++G+PA SIHGD+ Q ER+ L F+SGR+PI+ ATDVAARGL
Sbjct: 436 NWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGL 482
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 145/328 (44%), Positives = 204/328 (62%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V G PRP+ F +F +E I K + +PTPIQA P AL GRD++GIA+TG
Sbjct: 253 LRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTG 312
Query: 75 SGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCI 134
SGKT +YL PA VH+ QP L GEGP+ +++ PTRELA+Q+ +EA KF I C
Sbjct: 313 SGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICA 372
Query: 135 YGGAPKGPQIRDLRR-GVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEP 193
YGG K Q +L+ G E+V+ TPGR+ID+++ TN R T+LV DEADRM DMGFE
Sbjct: 373 YGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEA 432
Query: 194 QIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVV 253
Q++ I +RPDRQ L +SAT+ ++VE LAR L +P +++ G + +AN I Q V V+
Sbjct: 433 QVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVG-EANADIEQKVFVM 491
Query: 254 TEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQ 313
+ + + LI+ L E ++LIF K + V ++L+M + + +HGD Q
Sbjct: 492 QNQD----VKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQ 547
Query: 314 SERDWVLAEFRSGRSPIMTATDVAARGL 341
+ER+ L +FR +S I+ ATDVAARGL
Sbjct: 548 AERNENLLKFRK-KSQILVATDVAARGL 574
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 147/346 (42%), Positives = 210/346 (60%)
Query: 9 YRARREITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRD 66
+ A +I VE G DVP P+ F + + D I + +V PTP+Q P+ L RD
Sbjct: 131 FDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERD 190
Query: 67 LIGIAETGSGKTLSYLLPAFV------HVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L+ A+TGSGKT ++ P HV +PR + P ++L+PTRELA QI +EA
Sbjct: 191 LMACAQTGSGKTAAFCFPIISGIMKDQHVE-RPRGSRAVYPFAVILSPTRELACQIHDEA 249
Query: 121 LKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVL 180
KF + G++ YGG P Q+R+L RG +I++ATPGRL D+LE +++ + +L L
Sbjct: 250 KKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLAL 309
Query: 181 DEADRMLDMGFEPQIRKIVTQI----RPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
DEADRMLDMGFEPQIRKIV Q+ R RQT+ +SAT+P +++ LA F+ N + +G
Sbjct: 310 DEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVG 369
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRI-LIFTETKKGCDQVTR 295
+ + I Q VE V E++K + + L+ +E D + L+F ETK+G D +
Sbjct: 370 RVG-SSTDLITQRVEFVQESDKRSHLM--DLLHAQRETQDKQSLTLVFVETKRGADTLEN 426
Query: 296 QLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L M+ +PA SIHGD+ Q ER+ L F++GR+PI+ ATDVAARGL
Sbjct: 427 WLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 544 (196.6 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 124/245 (50%), Positives = 162/245 (66%)
Query: 101 PIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGR 160
PI LVLAPTRELA+QI +EA KF R+ +R +YGGA G QIRDL RG +++ATPGR
Sbjct: 299 PISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 358
Query: 161 LIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWP 216
L+DM+E L YLVLDEADRMLDMGFEPQIR+IV Q + P RQT+ +SAT+P
Sbjct: 359 LLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSATFP 418
Query: 217 REVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD 276
+E++ LAR FL + + +G + +++I Q V V E +K + F L+ LL
Sbjct: 419 KEIQILARDFLEDYIFLAVGRVG-STSENITQKVVWVEENDKRS--F---LLDLLNATGK 472
Query: 277 GSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDV 336
S L+F ETKKG D + L +G+ SIHGD++Q +R+ L +FRSGR PI+ AT V
Sbjct: 473 DSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAV 532
Query: 337 AARGL 341
AARGL
Sbjct: 533 AARGL 537
Score = 127 (49.8 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE GH+ P+PI F + + + I + PTP+Q P+ RDL+ A
Sbjct: 193 DIPVEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACA 252
Query: 72 ETGSGKTLSYLLPAFVHV 89
+TGSGKT ++LLP +
Sbjct: 253 QTGSGKTAAFLLPVLSQI 270
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 147/349 (42%), Positives = 213/349 (61%)
Query: 1 MTETEVKMYRARREITVEGH-DVP-RPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGW 58
+ ++++ Y EI VE D+ RP+ F + I+K F +PTPIQA W
Sbjct: 86 LPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FPKPTPIQAVAW 143
Query: 59 PMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQE 118
P L G+D++G+AETGSGKT ++ +PA H+ + G VLV++PTRELA QI +
Sbjct: 144 PYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKK---RGIQVLVISPTRELASQIYD 200
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
+ + G++ C+YGG PK Q L++ ++V+ATPGRL+D+L+ +L +V YL
Sbjct: 201 NLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYL 259
Query: 179 VLDEADRMLDMGFEPQIRKIVTQIRPD-RQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
VLDEADRML+ GFE I+ I+ + RQTL ++ATWP+EV LA F+ NP KV IG+
Sbjct: 260 VLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGN 319
Query: 238 LE-LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG----SRILIFTETKKGCDQ 292
+ L AN+ I Q+VEVV K +L++LLK+ G ++LIF KK +
Sbjct: 320 TDQLTANKRITQIVEVVDPRGKER-----KLLELLKKYHSGPKKNEKVLIFALYKKEAAR 374
Query: 293 VTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
V R L+ +G+ +IHGD +Q +R L EF+SG+S ++ ATDVAARGL
Sbjct: 375 VERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGL 423
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 148/337 (43%), Positives = 197/337 (58%)
Query: 9 YRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLI 68
+R + + +EG P P + F + FP + GF PT IQ Q WP+ L G DL+
Sbjct: 94 WRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGGNDLV 151
Query: 69 GIAETGSGKTLSYLLPAFVHVSAQP-RLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRA 127
G+A TGSGKTL++LLPA + + + P R G P+VLV+APTRELA QI EE K R
Sbjct: 152 GLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQI-EEVCKTSIRG 210
Query: 128 -GIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRM 186
IR C YGG K Q R LR GV+IVI TPGRL D+L H L V YLVLDEADRM
Sbjct: 211 TSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKHH--LSSVQYLVLDEADRM 268
Query: 187 LDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSI 246
LDMGF PQI ++ QI +RQTL +SATWP+EV+ LA +FL++P K+ +GS EL + ++
Sbjct: 269 LDMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINV 328
Query: 247 NQ-VVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD-GWPA 304
Q +V + ++ + I I + + +++F K CD L +
Sbjct: 329 TQHIVNIDDLSDLQSDDLIYDEINKILTADPTNTVIVFCNEKYKCDDFQHYLSTQKNVKS 388
Query: 305 LSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ +H K+Q R+ L FR R I+ ATDVAARGL
Sbjct: 389 IVLHSGKDQRMRESGLKLFRDHRIRILIATDVAARGL 425
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 145/346 (41%), Positives = 211/346 (60%)
Query: 6 VKMYRARREITVEGHDVPRPIRIFQEANFPDYCLE-VIAKLGFVEPTPIQAQGWPMALKG 64
+K+Y R E TV+ +P P+ F++A + + I K GF +P+PIQ+Q WP+ L G
Sbjct: 65 MKVYPFREESTVK---IPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSG 121
Query: 65 RDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE--------GPIVLVLAPTRELAVQI 116
+D IG+++TGSGKTL++LLPA +H+ AQ L Q E P VLVL+PTRELA QI
Sbjct: 122 QDCIGVSQTGSGKTLAFLLPALLHIDAQ--LAQYEKNDEEQKPSPFVLVLSPTRELAQQI 179
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+ E K+ S G +S C+YGG + Q+ R GVEIVIATPGRL D+ +L VT
Sbjct: 180 EGEVKKY-SYNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVT 238
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
Y+VLDEADRMLDMGFE IR+I+ +IRPDR SATWP V L ++ + + G
Sbjct: 239 YVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNG 298
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS-RILIFTETKKGCDQVTR 295
SL+L + +S+ Q E V ++ + +C ++ L + +++IF ++K D ++
Sbjct: 299 SLDLTSCKSVTQFFEFVPHDSRF--LRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSS 356
Query: 296 QLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
M G + +HG ++QS+R+ L RSG I+ ATD+A+RG+
Sbjct: 357 DFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRGI 402
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 547 (197.6 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 125/245 (51%), Positives = 161/245 (65%)
Query: 101 PIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGR 160
PI LVLAPTRELA+QI +EA KF R+ +R +YGGA G QIRDL RG +++ATPGR
Sbjct: 315 PISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 374
Query: 161 LIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQ--IRP--DRQTLYWSATWP 216
L+DM+E L YLVLDEADRMLDMGFEPQIR+IV Q + P RQT+ +SAT+P
Sbjct: 375 LVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFP 434
Query: 217 REVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD 276
+E++ LAR FL + +G + +++I Q V V E +K + F L+ LL
Sbjct: 435 KEIQILARDFLEEYIFLAVGRVG-STSENITQKVVWVEENDKRS--F---LLDLLNATGK 488
Query: 277 GSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDV 336
S L+F ETKKG D + L +G+ SIHGD++Q +R+ L +FRSGR PIM AT V
Sbjct: 489 DSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAV 548
Query: 337 AARGL 341
AARGL
Sbjct: 549 AARGL 553
Score = 112 (44.5 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G + P I F + + + + I + PTP+Q P+ RDL+ A
Sbjct: 208 DIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACA 267
Query: 72 ETGSGKTLSYLLPAFVHVSAQ 92
+TGSGKT ++LLP + ++
Sbjct: 268 QTGSGKTAAFLLPVLSQIYSE 288
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 156/347 (44%), Positives = 209/347 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 164 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 223
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + P R ++ G PI LVLAPTRELAVQI E
Sbjct: 224 QTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 284 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 343
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V EA+K + F L+ LL S IL+F ETKKG D +
Sbjct: 404 VGRVG-STSENITQKVVWVEEADKRS--F---LLDLLNATGKDSLILVFVETKKGADSLE 457
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 458 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 504
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 156/347 (44%), Positives = 209/347 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 163 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 222
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + P R ++ G PI LVLAPTRELAVQI E
Sbjct: 223 QTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYE 282
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 283 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 342
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 343 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 402
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V EA+K + F L+ LL S IL+F ETKKG D +
Sbjct: 403 VGRVG-STSENITQKVVWVEEADKRS--F---LLDLLNATGKDSLILVFVETKKGADSLE 456
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 457 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 503
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 155/347 (44%), Positives = 209/347 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ PR I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 166 DIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 225
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + P + V+ G PI LVLAPTRELAVQI E
Sbjct: 226 QTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYE 285
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 286 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 345
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 346 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 405
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E++K + F L+ LL S L+F ETKKG D +
Sbjct: 406 VGRVG-STSENITQKVVWVEESDKRS--F---LLDLLNATGKDSLTLVFVETKKGADSLE 459
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 460 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 506
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 150/346 (43%), Positives = 208/346 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE GHDVP P+ F D+ + IA + PTP+Q P+ + GRDL+ A
Sbjct: 171 DIPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACA 230
Query: 72 ETGSGKTLSYLLPAFVHV-----SAQPRLVQGE-G------PIVLVLAPTRELAVQIQEE 119
+TGSGKT +L P +A P G+ G P L+LAPTREL QI +E
Sbjct: 231 QTGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDE 290
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
A KF R+ +R +YGGA G Q+R + RG ++++ATPGRL+D++E +L + YL+
Sbjct: 291 ARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLI 350
Query: 180 LDEADRMLDMGFEPQIRKIVT-QIRP---DRQTLYWSATWPREVETLARQFLRNPYKVII 235
LDEADRMLDMGFEPQIR+IV + P DRQTL +SAT+PR+++ LAR FL++ + +
Sbjct: 351 LDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSV 410
Query: 236 GSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTR 295
G + +++I Q VE V + +K S+ L+ +L LIF ETK+ D ++
Sbjct: 411 GRVG-STSENITQKVEYVEDHDK-RSV----LLDILHTHGTTGLTLIFVETKRMADALSE 464
Query: 296 QLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +PA +IHGD+ Q ER+ L FRSGR PI+ AT VAARGL
Sbjct: 465 FLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGL 510
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 154/347 (44%), Positives = 210/347 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 207 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 266
Query: 72 ETGSGKTLSYLLPAFVHV-SAQP----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + S P R ++ G PI LVLAPTRELAVQI E
Sbjct: 267 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 326
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 327 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 386
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 387 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 446
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E++K + F+ L+ + D S L+F ETKKG D +
Sbjct: 447 VGRVG-STSENITQKVVWVEESDKRS--FLLDLLNATESGKD-SLTLVFVETKKGADSLE 502
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 503 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 549
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 155/347 (44%), Positives = 209/347 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 164 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 223
Query: 72 ETGSGKTLSYLLPAFVHV-SAQP----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + S P R ++ G PI LVLAPTRELAVQI E
Sbjct: 224 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 284 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 343
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E++K + F L+ LL S L+F ETKKG D +
Sbjct: 404 VGRVG-STSENITQKVVWVEESDKRS--F---LLDLLNATGKDSLTLVFVETKKGADSLE 457
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 458 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 504
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 155/347 (44%), Positives = 209/347 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 72 ETGSGKTLSYLLPAFVHV-SAQP----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + S P R ++ G PI LVLAPTRELAVQI E
Sbjct: 225 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E++K + F L+ LL S L+F ETKKG D +
Sbjct: 405 VGRVG-STSENITQKVVWVEESDKRS--F---LLDLLNATGKDSLTLVFVETKKGADSLE 458
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 459 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 155/347 (44%), Positives = 209/347 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 72 ETGSGKTLSYLLPAFVHV-SAQP----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + S P R ++ G PI LVLAPTRELAVQI E
Sbjct: 225 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E++K + F L+ LL S L+F ETKKG D +
Sbjct: 405 VGRVG-STSENITQKVVWVEESDKRS--F---LLDLLNATGKDSLTLVFVETKKGADSLE 458
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 459 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 155/347 (44%), Positives = 209/347 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 72 ETGSGKTLSYLLPAFVHV-SAQP----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + S P R ++ G PI LVLAPTRELAVQI E
Sbjct: 225 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E++K + F L+ LL S L+F ETKKG D +
Sbjct: 405 VGRVG-STSENITQKVVWVEESDKRS--F---LLDLLNATGKDSLTLVFVETKKGADSLE 458
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 459 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 155/347 (44%), Positives = 208/347 (59%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + A P R ++ G PI LVLAPTRELAVQI E
Sbjct: 225 QTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E +K + F L+ LL S L+F ETKKG D +
Sbjct: 405 VGRVG-STSENITQKVVWVEEIDKRS--F---LLDLLNATGKDSLTLVFVETKKGADSLE 458
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 459 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 155/347 (44%), Positives = 208/347 (59%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + A P R ++ G PI LVLAPTRELAVQI E
Sbjct: 225 QTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E +K + F L+ LL S L+F ETKKG D +
Sbjct: 405 VGRVG-STSENITQKVVWVEEIDKRS--F---LLDLLNATGKDSLTLVFVETKKGADSLE 458
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 459 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 155/347 (44%), Positives = 208/347 (59%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G + P I F + + + + I + PTP+Q P+ + RDL+ A
Sbjct: 143 DIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 202
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + A P R ++ G PI LVLAPTRELAVQI E
Sbjct: 203 QTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 262
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 263 EARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 322
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 323 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 382
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E +K + F L+ LL S L+F ETKKG D +
Sbjct: 383 VGRVG-STSENITQKVVWVEELDKRS--F---LLDLLNATGKDSLTLVFVETKKGADALE 436
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 437 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 483
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 151/344 (43%), Positives = 205/344 (59%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V G++ P I F + + + I + PTP+Q P+ + RDL+ A+TG
Sbjct: 168 VEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 75 SGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQEEAL 121
SGKT ++LLP + P + V+ G PI LVLAPTRELAVQI EEA
Sbjct: 228 SGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KF R+ + +YGGA G QIRDL RG +++ATPGRL+DM+E L YLVLD
Sbjct: 288 KFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLD 347
Query: 182 EADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
EADRMLDMGFEPQIR+I+ Q + P R T+ +SAT+P+E++ LAR FL + +G
Sbjct: 348 EADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGR 407
Query: 238 LELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL 297
+ +++I Q V V EA+K + F L+ LL S L+F ETKKG D + L
Sbjct: 408 VG-STSENITQKVVWVEEADKRS--F---LLDLLNATGTDSLTLVFVETKKGADSLEDFL 461
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 462 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 438 (159.2 bits), Expect = 4.4e-61, Sum P(2) = 4.4e-61
Identities = 95/229 (41%), Positives = 137/229 (59%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M E + ++++ I +G VP P+R + E+ P LE++ ++G+ EPTPIQ P+
Sbjct: 320 MRERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPI 379
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE-----GPIVLVLAPTRELAVQ 115
A++ RDLIG+A TGSGKT ++LLP +++ PR+ + E GP +VLAPTRELA Q
Sbjct: 380 AMQSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQ 439
Query: 116 IQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRV 175
I+ EA KF G I GG Q LR G EI+IATPGRL+D +E + L +
Sbjct: 440 IEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQC 499
Query: 176 TYLVLDEADRMLDMGFEPQIRKI-----VTQIRPDRQTLYWSATWPREV 219
Y+++DEADRM+D+GFE + KI VT +PD + S+ R +
Sbjct: 500 CYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHL 548
Score = 219 (82.2 bits), Expect = 4.4e-61, Sum P(2) = 4.4e-61
Identities = 47/136 (34%), Positives = 81/136 (59%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ ++AT P VE +AR++LR P V IGS +A ++ Q VE++ +K
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAG-EAVDTVEQRVEMIAGEDKRKK---- 609
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
RL ++L I++F K+ CD + R+++ G+ ++++HG K Q +R+ LA R+
Sbjct: 610 RLGEILSSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRN 669
Query: 326 GRSPIMTATDVAARGL 341
G + ++ ATD+A RG+
Sbjct: 670 GSTDVLVATDLAGRGI 685
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 155/348 (44%), Positives = 207/348 (59%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G + P I F + + + + I + PTP+Q P+ + RDL+ A
Sbjct: 141 DIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 200
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P-------RLVQGE-G-----PIVLVLAPTRELAVQIQ 117
+TGSGKT ++LLP + A P + G G PI LVLAPTRELAVQI
Sbjct: 201 QTGSGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELAVQIY 260
Query: 118 EEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTY 177
EEA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L Y
Sbjct: 261 EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 320
Query: 178 LVLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKV 233
LVLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 321 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFL 380
Query: 234 IIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQV 293
+G + +++I Q V V E +K + F L+ LL S L+F ETKKG D +
Sbjct: 381 AVGRVG-STSENITQKVVWVEELDKRS--F---LLDLLNATGKDSLTLVFVETKKGADAL 434
Query: 294 TRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 435 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 482
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 150/341 (43%), Positives = 205/341 (60%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ G DVP PI F + +E I F +PTP+Q P+ KGRDL+ A+TG
Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTG 201
Query: 75 SGKTLSYLLPAFVHV-----SAQPRLVQG----EG-PIVLVLAPTRELAVQIQEEALKFG 124
SGKT +L P F + S P Q +G P LVLAPTRELA QI EEA KF
Sbjct: 202 SGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFT 261
Query: 125 SRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEAD 184
R+ +R +YGGAP G Q+R++ RG ++++ATPGRL D+LE +L + YLVLDEAD
Sbjct: 262 YRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEAD 321
Query: 185 RMLDMGFEPQIRKIVTQI-RP---DRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
RMLDMGFEPQIR IV + P +RQTL +SAT+P +++ LAR FL N + +G +
Sbjct: 322 RMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVG- 380
Query: 241 KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD 300
+++I Q + V + +K ++ L+ LL G LIF ETK+ DQ+T L M
Sbjct: 381 STSENITQRILYVDDMDKKSA-----LLDLLSAEHKGLT-LIFVETKRMADQLTDFLIMQ 434
Query: 301 GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ A +IHGD+ Q+ER+ L+ F++ + I+ AT VAARGL
Sbjct: 435 NFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGL 475
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 149/341 (43%), Positives = 203/341 (59%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ G DVP PI F LE I F +PTP+Q P+ GRDL+ A+TG
Sbjct: 130 VDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTG 189
Query: 75 SGKTLSYLLPAFVHV-----SAQPR----LVQGEG-PIVLVLAPTRELAVQIQEEALKFG 124
SGKT +L P S QP Q + P +++APTRELA QI +EA KF
Sbjct: 190 SGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFT 249
Query: 125 SRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEAD 184
R+ +++ +YGG+P G Q+R++ RG ++++ATPGRL D+LE +L V YLVLDEAD
Sbjct: 250 YRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEAD 309
Query: 185 RMLDMGFEPQIRKIVTQ--IRP--DRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL 240
RMLDMGFEPQIR IV + P +RQTL +SAT+P +++ LAR FL + + +G +
Sbjct: 310 RMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVG- 368
Query: 241 KANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMD 300
+++I Q V V +K ++ L+ LL DG LIF ETK+ DQ+T L M
Sbjct: 369 STSENITQKVLYVENQDKKSA-----LLDLLSASTDGLT-LIFVETKRMADQLTDFLIMQ 422
Query: 301 GWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ A +IHGD+ QSER+ LA FRSG + ++ AT VAARGL
Sbjct: 423 NFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGL 463
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 632 (227.5 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 135/345 (39%), Positives = 210/345 (60%)
Query: 1 MTETEVKMYRARR-EITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M +++V M+R I V G + PRP++ F + P L+++ K F + IQ Q P
Sbjct: 696 MKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIP 755
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRD+I IAETGSGKTLSYL P HV Q L +GPI ++L PTREL++Q++ E
Sbjct: 756 ALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNE 815
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
A + I +YGG+ Q++ L++GVEI++ TPGR+ID+L + TNL RV+
Sbjct: 816 AKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVS 875
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
++VLDEADR+LD+GFE QI I+ R D+QT SAT+P ++ +A++ L P ++I+G
Sbjct: 876 FVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVG 935
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ K N +I Q VE++ E++K + RL+KLL E + +LIF + D + +
Sbjct: 936 E-KGKTNNNIYQFVEIIEESKK-----VFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLE 989
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L + L +HG ++Q++R + L +F+ + ++ AT V ARG+
Sbjct: 990 LYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGI 1034
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 632 (227.5 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 135/345 (39%), Positives = 210/345 (60%)
Query: 1 MTETEVKMYRARR-EITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWP 59
M +++V M+R I V G + PRP++ F + P L+++ K F + IQ Q P
Sbjct: 696 MKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIP 755
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRD+I IAETGSGKTLSYL P HV Q L +GPI ++L PTREL++Q++ E
Sbjct: 756 ALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNE 815
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQH---TNLRRVT 176
A + I +YGG+ Q++ L++GVEI++ TPGR+ID+L + TNL RV+
Sbjct: 816 AKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVS 875
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
++VLDEADR+LD+GFE QI I+ R D+QT SAT+P ++ +A++ L P ++I+G
Sbjct: 876 FVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVG 935
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ K N +I Q VE++ E++K + RL+KLL E + +LIF + D + +
Sbjct: 936 E-KGKTNNNIYQFVEIIEESKK-----VFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLE 989
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L + L +HG ++Q++R + L +F+ + ++ AT V ARG+
Sbjct: 990 LYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGI 1034
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 154/348 (44%), Positives = 209/348 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKG-RDLIGI 70
+I VE G + P I F + + + + I + PTP+Q P+ +KG RDL+
Sbjct: 160 DIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPI-IKGKRDLMAC 218
Query: 71 AETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQ 117
A+TGSGKT ++LLP + P + V+ G PI LVLAPTRELAVQI
Sbjct: 219 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 278
Query: 118 EEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTY 177
EEA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L Y
Sbjct: 279 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 338
Query: 178 LVLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKV 233
LVLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 339 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFL 398
Query: 234 IIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQV 293
+G + +++I Q V V + +K + F L+ +L S L+F ETKKG D +
Sbjct: 399 AVGRVG-STSENITQKVVWVEDLDKRS--F---LLDILGATGSDSLTLVFVETKKGADSL 452
Query: 294 TRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 453 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 500
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 154/348 (44%), Positives = 209/348 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKG-RDLIGI 70
+I VE G + P I F + + + + I + PTP+Q P+ +KG RDL+
Sbjct: 163 DIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPI-IKGKRDLMAC 221
Query: 71 AETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQ 117
A+TGSGKT ++LLP + P + V+ G PI LVLAPTRELAVQI
Sbjct: 222 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 281
Query: 118 EEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTY 177
EEA KF R+ +R +YGGA G QIRDL RG +++ATPGRL+DM+E L Y
Sbjct: 282 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 341
Query: 178 LVLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKV 233
LVLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 342 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFL 401
Query: 234 IIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQV 293
+G + +++I Q V V + +K + F L+ +L S L+F ETKKG D +
Sbjct: 402 AVGRVG-STSENITQKVVWVEDLDKRS--F---LLDILGATGSDSLTLVFVETKKGADSL 455
Query: 294 TRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +G+ SIHGD++Q +R+ L +FRSG+SPI+ AT VAARGL
Sbjct: 456 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 503
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 146/344 (42%), Positives = 209/344 (60%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G VP PI F + +E I F +PTP+Q P+ GRDL+ A
Sbjct: 171 DIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACA 230
Query: 72 ETGSGKTLSYLLPAFV--HVSAQPRLVQGEG--------PIVLVLAPTRELAVQIQEEAL 121
+TGSGKT +L P ++ + + G P +LV+APTREL QI EE+
Sbjct: 231 QTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESK 290
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KF R+ +R+ +YGGA G Q+R++ RG ++++ATPGRL D+L+ +L + YLVLD
Sbjct: 291 KFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLD 350
Query: 182 EADRMLDMGFEPQIRKIVTQI-RP---DRQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
EADRMLDMGFEPQIR IV + P DRQTL +SAT+PR+++ LAR FL++ + +G
Sbjct: 351 EADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGR 410
Query: 238 LELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL 297
+ +++I Q + V + EK S+ ++ LL +G I +FTETK+ D + L
Sbjct: 411 VG-STSENITQKILYVEDDEK-KSV----ILDLLSANENGLTI-VFTETKRMADNLADYL 463
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
G+PA +IHGD++Q ER+ LA F++G +PI+ AT VAARGL
Sbjct: 464 YDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGL 507
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 136/345 (39%), Positives = 207/345 (60%)
Query: 1 MTETEVKMYRARREITVEGHDVP--RPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGW 58
++++++ + + EITVE RPI F + ++K F +PTPIQ+ W
Sbjct: 127 VSQSDIDKFLSDNEITVEDPSSSSLRPILSFDQVQLTSAITSKLSK--FDKPTPIQSVSW 184
Query: 59 PMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQE 118
P L G+D+IG+AETGSGKT ++ +PA ++ + VL ++PTRELA+QI +
Sbjct: 185 PFLLSGKDVIGVAETGSGKTFAFGVPAINNIITTGNT---KTLSVLCISPTRELALQIYD 241
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
++ + +G+ +YGG K QIR ++ +V+ATPGRL+D++ NL +V YL
Sbjct: 242 NLIELTADSGVNCVAVYGGVSKDDQIRKIKTA-NVVVATPGRLVDLINDGAINLGKVNYL 300
Query: 179 VLDEADRMLDMGFEPQIRKIVTQI-RPDRQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
VLDEADRML+ GFE I+ I++ +RQTL ++ATWP+EV LA F+ +P KV +G
Sbjct: 301 VLDEADRMLEKGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGD 360
Query: 238 L-ELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
EL AN+ I QVVEV+ + +K + I L K ++ILIF KK ++
Sbjct: 361 RDELSANKRITQVVEVINKFDKEKKL-IQLLRKYNANESSDNKILIFALYKKEASRIENF 419
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L+ + + +IHGD +Q +R L+ F+SG+S ++ ATDVAARGL
Sbjct: 420 LKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGL 464
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 146/342 (42%), Positives = 202/342 (59%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V G VP I F EA F +E + + G+ +PTP+Q P L RDL+ A+TG
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 186
Query: 75 SGKTLSYLLPAFVHVSA-------QPRLVQGEG---PIVLVLAPTRELAVQIQEEALKFG 124
SGKT ++LLP H+ A P G P LVL+PTRELA+QI +EA KF
Sbjct: 187 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 246
Query: 125 SRAGIRSTCIYGGAPK-GPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEA 183
++ I++ +YGG Q+ LR G I+IATPGRLID++E L YLVLDEA
Sbjct: 247 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEA 306
Query: 184 DRMLDMGFEPQIRKIVTQIRPD---RQTLYWSATWPREVETLARQFLRNPYKVI-IGSLE 239
DRMLDMGFEPQIRKIV Q P R T +SAT+P+E++ LA+ FL++ Y + +G +
Sbjct: 307 DRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG 366
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRM 299
+++I Q + V E EK ++ L+++L + +L+F ETK+G +++ L
Sbjct: 367 -STSENIEQRLLWVNEMEKRSN-----LMEILMNEHSENLVLVFVETKRGANELAYFLNR 420
Query: 300 DGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
++SIHGD Q ER+ L FRSG+ PI+ AT VAARGL
Sbjct: 421 QQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGL 462
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 151/347 (43%), Positives = 204/347 (58%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 164 DIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 223
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSGKT ++LLP + P + ++ G PI LVLAPTRELAVQI E
Sbjct: 224 QTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 284 EARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 343
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E +K + F L+ LL S L+F ETKKG D +
Sbjct: 404 VGRVG-STSENITQKVVWVEELDKRS--F---LLDLLNATGKDSLTLVFVETKKGADSLE 457
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L + + SIHGD++Q +R+ L +FRSGR PI+ AT VAARGL
Sbjct: 458 NFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGL 504
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 137/336 (40%), Positives = 199/336 (59%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336
Query: 75 SGKTLSYLLPAFVHVS----AQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 337 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 396
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + LR+V YLVLDEADRMLDMG
Sbjct: 397 AVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDMG 456
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 457 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 515
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 516 VQQTILQVGQYSKRE-----KLVEILRSIGD-ERTMVFVETKKKADFIATFLCQEKISTT 569
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 570 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 605
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 136/336 (40%), Positives = 199/336 (59%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 256 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 315
Query: 75 SGKTLSYLLPAFVHVS----AQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 316 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 375
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + L+++ YLVLDEADRMLDMG
Sbjct: 376 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 435
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 436 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRD 494
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q V V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 495 VQQTVLQVGQFSKRE-----KLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTT 548
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 549 SIHGDREQREREQALGDFRFGKCPVLVATSVAARGL 584
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 136/336 (40%), Positives = 199/336 (59%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 276 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 335
Query: 75 SGKTLSYLLPAFVHVS----AQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 336 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 395
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + L+++ YLVLDEADRMLDMG
Sbjct: 396 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 455
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 456 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRD 514
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q V V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 515 VQQTVLQVGQFSKRE-----KLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTT 568
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 569 SIHGDREQREREQALGDFRFGKCPVLVATSVAARGL 604
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 139/351 (39%), Positives = 207/351 (58%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+ + + R + I V G D+P PI+ F++ FP L+ + + G V+PTPIQ QG P+
Sbjct: 120 MSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPV 179
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQ----GEGPIVLVLAPTRELAVQI 116
L GRD+IGIA TGSGKTL ++LP + ++ Q ++ GEGPI L++ P+RELA Q
Sbjct: 180 ILAGRDMIGIAFTGSGKTLVFVLP-MIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQT 238
Query: 117 QEEALKFGS---RAG---IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHT 170
E +F + AG +RS GG Q+ ++RGV IV+ATPGRL DML +
Sbjct: 239 YEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKM 298
Query: 171 NLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNP 230
+L YL LDEADR++D+GFE IR++ + RQTL +SAT P +++ AR L P
Sbjct: 299 SLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKP 358
Query: 231 YKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGC 290
V +G AN + Q VE V + K I L++ L++ +LIF E K
Sbjct: 359 VTVNVGRAGA-ANLDVIQEVEYVKQEAK-----IVYLLECLQKT--SPPVLIFCENKADV 410
Query: 291 DQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
D + L + G A++IHG K+Q +R++ ++ F++G+ ++ ATDVA++GL
Sbjct: 411 DDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGL 461
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 150/347 (43%), Positives = 203/347 (58%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G++ P I F + + + I + PTP+Q P+ + RDL+ A
Sbjct: 158 DIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 217
Query: 72 ETGSGKTLSYLLPAFVHVSAQ-P----RLVQGEG--------PIVLVLAPTRELAVQIQE 118
+TGSG T ++LLP + P + ++ G PI LVLAPTRELAVQI E
Sbjct: 218 QTGSGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 277
Query: 119 EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYL 178
EA KF R+ +R +YGGA QIRDL RG +++ATPGRL+DM+E L YL
Sbjct: 278 EARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 337
Query: 179 VLDEADRMLDMGFEPQIRKIVTQ--IRPD--RQTLYWSATWPREVETLARQFLRNPYKVI 234
VLDEADRMLDMGFEPQIR+IV Q + P R T+ +SAT+P+E++ LAR FL +
Sbjct: 338 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 397
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q V V E +K + F L+ LL S L+F ETKKG D +
Sbjct: 398 VGRVG-STSENITQKVVWVEELDKRS--F---LLDLLNATGRDSLTLVFVETKKGADSLE 451
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L + + SIHGD++Q +R+ L +FRSGR PI+ AT VAARGL
Sbjct: 452 NFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGL 498
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 135/336 (40%), Positives = 198/336 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 249 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 308
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 309 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 368
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G +R + +G I+ ATPGRL+D++ + L++V YLVLDEADRMLDMG
Sbjct: 369 AVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 428
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA FL++ Y V +G + A +
Sbjct: 429 FGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVG-GACRD 487
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 488 VQQTILQVGQYSKRE-----KLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTT 541
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 542 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 577
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 136/336 (40%), Positives = 199/336 (59%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 250 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 309
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 310 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 369
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + L++V YLVLDEADRMLDMG
Sbjct: 370 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 429
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 430 FGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 488
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 489 VQQSILQVGQYSKRE-----KLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTT 542
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 543 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 578
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 149/350 (42%), Positives = 202/350 (57%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
+I VE G +VP I F + + +A + +PTP+Q P+ + GRDL+ A
Sbjct: 280 DIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACA 339
Query: 72 ETGSGKTLSYLLPAFV------HV----SAQPRLVQGEGPIVLVLAPTRELAVQIQEEAL 121
+TGSGKT ++L+P HV S + + + P+ LVLAPTRELA QI EEA
Sbjct: 340 QTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAK 399
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KF R+ +R +YGG Q+R+L RG +++ATPGRL DM+ L + +LVLD
Sbjct: 400 KFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLD 459
Query: 182 EADRMLDMGFEPQIRKIVTQIR-P---DRQTLYWSATWPREVETLARQFLRNPYKVIIGS 237
EADRMLDMGFEPQIR+IV Q+ P RQTL +SAT+P++++ LA FL N + +G
Sbjct: 460 EADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGR 519
Query: 238 LELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG------SRILIFTETKKGCD 291
+ +++I Q + V E +K + L+ LL + DG S LIF ETKKG D
Sbjct: 520 VG-STSENITQTILWVYEPDKRSY-----LLDLLSSIRDGPEYTKDSLTLIFVETKKGAD 573
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L P SIHGD+ Q ER+ L FRSG PI+ AT VAARGL
Sbjct: 574 SLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGL 623
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 144/343 (41%), Positives = 204/343 (59%)
Query: 14 EITVEGHD-VPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAE 72
+I++E + + P+ F + + D L I + +PTP+Q P+ LK RDL+ A+
Sbjct: 233 DISIETSEHICAPLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQ 292
Query: 73 TGSGKTLSYLLPAFVHV----------SAQPRLVQGEGPIVLVLAPTRELAVQIQEEALK 122
TGSGKT ++L P + + +P + + P LVLAPTRELA QI +EA K
Sbjct: 293 TGSGKTAAFLFPIISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANK 352
Query: 123 FGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDE 182
F + + S IYGGA QI +L RG +I++AT GRL+D+L +L ++ YLVLDE
Sbjct: 353 FSYGSPVSSVVIYGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDE 412
Query: 183 ADRMLDMGFEPQIRKIVTQI-RP---DRQTLYWSATWPREVETLARQFLRNPYKVIIGSL 238
ADRMLDMGFEPQIR+I+++ P DRQTL +SAT+P++++ LA FL N + +G +
Sbjct: 413 ADRMLDMGFEPQIRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVV 472
Query: 239 ELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLR 298
Q+I Q +E V E +K NS ++ + LK DG LIF ETK+ CD +T L
Sbjct: 473 G--TTQNITQRIEYVVEEDK-NS-YLLDYLSGLKS--DGL-CLIFVETKRSCDTLTYFLN 525
Query: 299 MDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+P IHGD Q ER+ L FRS +P + ATD+A+RGL
Sbjct: 526 QRNFPTTCIHGDLTQPERENALQSFRSFATPFLVATDIASRGL 568
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 136/336 (40%), Positives = 198/336 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ GRDL+ A+TG
Sbjct: 278 VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTG 337
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 338 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 397
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + LR+V YLVLDEADRMLDMG
Sbjct: 398 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMG 457
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 458 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 516
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 517 VQQTILQVGQYSKRE-----KLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTT 570
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 571 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 606
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 136/336 (40%), Positives = 198/336 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ GRDL+ A+TG
Sbjct: 278 VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTG 337
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 338 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 397
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + LR+V YLVLDEADRMLDMG
Sbjct: 398 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMG 457
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 458 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 516
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 517 VQQTILQVGQYSKRE-----KLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTT 570
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 571 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 606
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 135/336 (40%), Positives = 198/336 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336
Query: 75 SGKTLSYLLPAFVHVS----AQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ + + P +++APTREL QI EA KF +R
Sbjct: 337 SGKTAAFLLPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 396
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + L+++ YLVLDEADRMLDMG
Sbjct: 397 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 456
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 457 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRD 515
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q V V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 516 VQQTVLQVGQFSKRE-----KLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTT 569
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 570 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 605
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 135/336 (40%), Positives = 198/336 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 274 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 333
Query: 75 SGKTLSYLLPAFVHVS----AQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 334 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 393
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + L+++ YLVLDEADRMLDMG
Sbjct: 394 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 453
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 454 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRD 512
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q V + K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 513 VQQADLQVGQYSKRE-----KLLEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTT 566
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 567 SIHGDREQREREQALGDFRFGKCPVLVATSVAARGL 602
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 136/336 (40%), Positives = 198/336 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 320
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 321 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 380
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + L++V YLVLDEADRMLDMG
Sbjct: 381 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 440
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 441 FGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 499
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 500 VQQSILQVGPVFKKR-----KLVEILRNIGD-ERPMVFVETKKKADFIATFLCQEKISTT 553
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 554 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 589
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 136/336 (40%), Positives = 198/336 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+EAN IAK G+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 320
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + + P +++APTREL QI EA KF +R
Sbjct: 321 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 380
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+ IYGG G IR + +G I+ ATPGRL+D++ + L++V YLVLDEADRMLDMG
Sbjct: 381 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 440
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+P E++ LA +FL++ Y V +G + A +
Sbjct: 441 FGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 499
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V K +L+++L+ + D R ++F ETKK D + L +
Sbjct: 500 VQQSILQVGPVFKKR-----KLVEILRNIGD-ERPMVFVETKKKADFIATFLCQEKISTT 553
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 554 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 589
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 132/335 (39%), Positives = 197/335 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V G ++P I F+EA + I++ G+V+PTP+Q G P+ GRDL+ A+TG
Sbjct: 169 VDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLMACAQTG 228
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP + A R + + P +++APTREL QI +EA KF +R
Sbjct: 229 SGKTAAFLLPILQQLMADGVAASRFSEIQEPEAVIVAPTRELINQIYQEARKFSFGTCVR 288
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+YGG G Q+R++ +G ++ TPGRL+DM+ L +V +LVLDEADRMLDMG
Sbjct: 289 PVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGKVGLSKVRHLVLDEADRMLDMG 348
Query: 191 FEPQIRKIVTQ----IRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSI 246
FEP +R++V + +RQTL +SAT+P +++ LA FL+ Y + + A +
Sbjct: 349 FEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGACTDV 408
Query: 247 NQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALS 306
Q VT K+N +L+ LL+ + R ++F ETK+ D + L + P S
Sbjct: 409 EQTFLQVT---KFNKRE--QLLDLLRTI-GSERTMVFVETKRQADFIAAFLCQEKVPTTS 462
Query: 307 IHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
IHGD+ Q ER+ LA+FRSG+ P++ AT VA+RGL
Sbjct: 463 IHGDREQREREKALADFRSGKCPVLVATSVASRGL 497
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 136/315 (43%), Positives = 194/315 (61%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
FQ L + K G+ PTPIQ Q P+ ++GRD++G+A+TG+GKTL++ P
Sbjct: 9 FQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDR 68
Query: 89 VS--AQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
+S A P V+G VLVLAPTRELA QI +G+ +R + GGA G QIR
Sbjct: 69 LSRNASPAPVRGTR--VLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQ 126
Query: 147 LRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDR 206
L RG I++ATPGRLID++E + +L +V L+LDEAD+MLD+GF +R I + R
Sbjct: 127 LERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSKR 186
Query: 207 QTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICR 266
QTL++SAT P+ VE+LA FLRNP +V + A + I Q V V + EK +
Sbjct: 187 QTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGR-IEQRVCFVEQPEKASL----- 240
Query: 267 LIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSG 326
LI+ +++ S I +FT TK G D V ++L +++IHG+K+QS+R+ L F++G
Sbjct: 241 LIEKIRDPELRSAI-VFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAG 299
Query: 327 RSPIMTATDVAARGL 341
R PI+ ATD+AARG+
Sbjct: 300 RVPILVATDIAARGI 314
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 143/345 (41%), Positives = 201/345 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V G D+ P+ F + L+ I G+ +PTP+Q P+ GRDL+ A+TG
Sbjct: 158 VEVSGGDI-EPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTG 216
Query: 75 SGKTLSYLLP----AFVHVSAQPRLVQGEG---------PIVLVLAPTRELAVQIQEEAL 121
SGKT +L P AF A + Q G P L+LAPTREL QI EE+
Sbjct: 217 SGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESR 276
Query: 122 KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLD 181
KF R+ +R +YGGA QIR + +G +++ ATPGRL+D+++ +L + +LVLD
Sbjct: 277 KFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLD 336
Query: 182 EADRMLDMGFEPQIRKIV-----TQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIG 236
EADRMLDMGFEPQIR IV T + +RQTL +SAT+PR+++ LAR FL++ + +G
Sbjct: 337 EADRMLDMGFEPQIRHIVEGADMTSVE-ERQTLMFSATFPRDIQLLARDFLKDYVFLSVG 395
Query: 237 SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQ 296
+ +++I Q V V ++EK + L+ +L + LIF ETK+ D +T
Sbjct: 396 RVG-STSENITQKVVHVEDSEKRSY-----LLDILHTLPPEGLTLIFVETKRMADTLTDY 449
Query: 297 LRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L +PA SIHGD+ Q ER+ L FRSGR+ IM AT VA+RGL
Sbjct: 450 LLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGL 494
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 137/315 (43%), Positives = 188/315 (59%)
Query: 39 LEVIAKL-----GFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQP 93
L+V AKL + EPTPIQA WP L GRD++GIAETGSGKT+++ +PA +++
Sbjct: 172 LDVSAKLREGLKNYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQYLNG-- 229
Query: 94 RLVQGEG-PIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVE 152
L + P VLV++PTRELA+Q E +++ +YGGAPK Q R +
Sbjct: 230 -LSDNKSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQAR-AAKNAS 287
Query: 153 IVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPD------R 206
++I TPGRL+D++ + +V YLVLDEADRMLD GFE IR I++ PD R
Sbjct: 288 VIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHT-PDPTRNGSR 346
Query: 207 QTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICR 266
QT+++SATWP V LA FL++P K+ IGS EL A+Q+I Q+VE++ + M
Sbjct: 347 QTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNL 406
Query: 267 LIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSG 326
L K L +ILIF KK +V L + + IHGD +Q R L +F+SG
Sbjct: 407 LRKHLSSGGKDDKILIFVLYKKEAARVEGTLARK-YNVVGIHGDMSQGARLQALNDFKSG 465
Query: 327 RSPIMTATDVAARGL 341
+ P++ ATDVAARGL
Sbjct: 466 KCPVLVATDVAARGL 480
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 143/348 (41%), Positives = 200/348 (57%)
Query: 3 ETEVKMYRARREITVEGHDVPRP-IRIFQEANF-PDYCLEVIAKL-GFVEPTPIQAQGWP 59
+TE+ + + I + +P +R +F P ++ A L GF PT IQ+ WP
Sbjct: 46 QTEIDKFLSDHSIKITDASADKPSLRPIISFSFLPPSNKDLYAPLDGFASPTAIQSATWP 105
Query: 60 MALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEE 119
+ GRD+IGIAETGSGKTL++ LP V + P+ +V++PTRELA+QI ++
Sbjct: 106 LLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQ 165
Query: 120 ALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+KF + I+ CI+GG K Q R+ + +V+ATPGRL D+ +L RV YLV
Sbjct: 166 LVKFAEKVDIQVACIFGGVKKDEQ-REALKSAAVVVATPGRLKDLQNDGSLDLGRVKYLV 224
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPD-RQTLYWSATWPREVETLARQFLRNPYKVIIG-- 236
LDEADRMLD GFE I+ I++ + RQT+ ++ATWP V LA F+ +P V IG
Sbjct: 225 LDEADRMLDKGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGGD 284
Query: 237 -SLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS--RILIFTETKKGCDQV 293
S + +AN I QVVEVV EK RL+++L G+ ++L F KK +V
Sbjct: 285 PSADPRANSRIKQVVEVVKPHEKEQ-----RLVQILNRHQRGTPDKVLAFCLYKKEAMRV 339
Query: 294 TRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
R LR G+ IHGD +Q ER L F+SG + ++ ATDVAARGL
Sbjct: 340 ERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGL 387
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 142/350 (40%), Positives = 204/350 (58%)
Query: 2 TETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKL-GFVEPTPIQAQGWPM 60
++ + ++ R R I+ EG +P PI F E FP LE + K G V PT IQ QG P+
Sbjct: 164 SQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPV 223
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPR---LVQGEGPIVLVLAPTRELAVQIQ 117
AL GRD+IGIA TGSGKT++++LP + Q ++ EGP L++ P+RELA QI
Sbjct: 224 ALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIF 283
Query: 118 EEALK-FGS--RAGI---RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
+ ++ F + +AG+ R+ GG P G Q +D+R G+ IV+ATPGRL DML + N
Sbjct: 284 DLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIIN 343
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YLVLDEADRMLDMGFE +I+ I + RQTL +SAT PR+++ A+ L P
Sbjct: 344 LEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPI 403
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
V +G A+ ++ Q +E V K + R+++ L++ ++LIF E K D
Sbjct: 404 VVNVGRAGA-ASLNVLQELEFVRSENK-----LVRVLECLQKT--SPKVLIFAEKKVDVD 455
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G SIHG K+QS+R + FR ++ ATDVA++GL
Sbjct: 456 NIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGL 505
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 519 (187.8 bits), Expect = 6.5e-57, Sum P(2) = 6.5e-57
Identities = 104/211 (49%), Positives = 145/211 (68%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ + +++R IT +G +P PIR +++++ P + LEVI K G+ EPTPIQ Q P+
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQI 116
L+ RD+IG+AETGSGKT ++L+P V ++ P++ + E GP ++LAPTRELA QI
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQI 484
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+EE +KFG GIR + GG + Q LR G EIVIATPGRLID+LE ++ L R T
Sbjct: 485 EEETIKFGKPLGIRPVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT 544
Query: 177 YLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
Y+VLDEADRM+DMGFEP ++KI+ + Q
Sbjct: 545 YVVLDEADRMIDMGFEPDVQKILEHMPVSNQ 575
Score = 93 (37.8 bits), Expect = 6.5e-57, Sum P(2) = 6.5e-57
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 304 ALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
A ++HG K Q +R++ L+ ++G I+ ATDVA RG+
Sbjct: 672 ACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 709
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 136/349 (38%), Positives = 198/349 (56%)
Query: 3 ETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMAL 62
E + + R + I +G D+P PI F+E P ++V+ + G +P+PIQ QG P+ L
Sbjct: 198 EKDHQKVRDQLNIITDGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVIL 257
Query: 63 KGRDLIGIAETGSGKTLSYLLPAFVHVSAQP---RLVQGEGPIVLVLAPTRELAVQIQE- 118
GRD+IGIA TGSGKTL + LP + + ++QGEGP L+L P+RELA Q +
Sbjct: 258 SGRDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELARQTYDL 317
Query: 119 -----EAL-KFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNL 172
AL K G +R+ GG Q ++GV ++IATPGRL+D+L + N
Sbjct: 318 VNSFTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINF 377
Query: 173 RRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYK 232
+ YL LDEADR++D+GFE IR ++ RQTL +SAT P++++ AR L P +
Sbjct: 378 KLCKYLGLDEADRLIDLGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVE 437
Query: 233 VIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQ 292
V +G AN ++ Q VE V K I L++ L++ +LIF E KK D
Sbjct: 438 VNVGRAGA-ANLNVTQEVEFVKPEAK-----IVYLLECLQKTPPP--VLIFCENKKDVDD 489
Query: 293 VTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + A+SIHGDK+Q ER+ + FR G+ ++ ATDVA++GL
Sbjct: 490 IYEYLLLKQVEAVSIHGDKSQDERESAIKAFREGKKDVLVATDVASKGL 538
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 135/351 (38%), Positives = 202/351 (57%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+ ++ + R + ITV G D+P PI+ F + FP L ++ G + PTPIQ QG P+
Sbjct: 71 MSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPV 130
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQ----GEGPIVLVLAPTRELAVQI 116
L GRD+IGIA TGSGKTL ++LP + ++ Q ++ GEGPI LV+ P+RELA Q
Sbjct: 131 VLSGRDMIGIAFTGSGKTLVFVLPMII-LALQEEIMMPIAAGEGPIALVICPSRELAKQT 189
Query: 117 QEEALKFGSRA---G---IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHT 170
+ +F + G +RS GG Q+ +++GV IV+ATPGRL D+L +
Sbjct: 190 YDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKM 249
Query: 171 NLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNP 230
+L L LDEADR++D+GFE IR + + RQTL +SAT P +++ A L P
Sbjct: 250 SLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKP 309
Query: 231 YKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGC 290
V +G AN + Q VE V + K I L++ L++ +LIF E K
Sbjct: 310 VTVNVGRAGA-ANLDVIQEVEYVKQEAK-----IVYLLECLQKTTPP--VLIFCENKADV 361
Query: 291 DQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
D + L + G A++IHG K+Q +RD+ ++ F++G+ ++ ATDVA++GL
Sbjct: 362 DDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGL 412
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 583 (210.3 bits), Expect = 2.1e-56, P = 2.1e-56
Identities = 140/363 (38%), Positives = 213/363 (58%)
Query: 1 MTETEVKMYRARRE-ITVEGHDVPRPIRIFQEANFP-DYCLEVIAKLGFVEPTPIQAQGW 58
M+E EV+ R + I ++G P+P+ + + D + + KL F TPIQ+Q
Sbjct: 228 MSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQAL 287
Query: 59 PMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE-GPIVLVLAPTRELAVQIQ 117
P + GRD+IGI++TGSGKT+SYLLP V AQ L + E GP+ L+LAPTRELA+QI
Sbjct: 288 PAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIH 347
Query: 118 EEALKFGSR-AGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNL---R 173
EE KF IRS C GG+ QI DL+RG EIV+ATPGR ID+L L +
Sbjct: 348 EEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTK 407
Query: 174 RVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKV 233
R+T++V+DEADR+ D+GFEPQI +I+ +RPD+Q + +SAT+P ++ + A + L +P +
Sbjct: 408 RITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISI 467
Query: 234 IIGSLELKANQSINQVVEVV-TEAEKYNSM--FICRLIKLLKEVM---DG---------S 278
I S + N+++ Q + +E EK++++ I + EV DG +
Sbjct: 468 TINSKGM-VNENVKQKFRICHSEDEKFDNLVQLIHERSEFFDEVQSENDGQSSDVEEVDA 526
Query: 279 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAA 338
+ +IF ++ CD ++++L G +IH K ER L +F+ ++ I+ T+V +
Sbjct: 527 KAIIFVSSQNICDFISKKLLNAGIVTCAIHAGKPYQERLMNLEKFKREKNSILLCTEVLS 586
Query: 339 RGL 341
RGL
Sbjct: 587 RGL 589
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 415 (151.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 84/213 (39%), Positives = 138/213 (64%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ + ++++ IT +G ++P P+R + E + D + +I++LG+ EPT +Q P+
Sbjct: 142 MTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPL 201
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHV-SAQPRLVQGEG----PIVLVLAPTRELAVQ 115
ALK RD++G+AETGSGKTL++L+P ++ S ++ E P+ L+LAPTRELA+Q
Sbjct: 202 ALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQ 261
Query: 116 IQEEALKFGSRAGIRSTCIYGGAPKGPQIRDL-RRGVEIVIATPGRLIDMLEAQHTNLRR 174
I +EA KF + G + I GG I + + GV +++ATPGRL+D +E + +L +
Sbjct: 262 ITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSK 321
Query: 175 VTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
LV+DEADRM+DMGFE + K++ ++ ++Q
Sbjct: 322 CYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQ 354
Score = 182 (69.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 47/139 (33%), Positives = 76/139 (54%)
Query: 206 RQTLYWSATWPREVETLARQFLRNP-YKVIIGSLELKAN--QSINQVVEVVTEAEKYNSM 262
R T+ ++AT VE L +++L +P Y I G+ E N QS + TEA K+N +
Sbjct: 369 RSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKL 428
Query: 263 FICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAE 322
++I+ V + I+IF K CD ++++L + + IHG K+Q R+ +
Sbjct: 429 I--KIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITN 486
Query: 323 FRSGRSPIMTATDVAARGL 341
FR+ S ++ ATDVAARG+
Sbjct: 487 FRNHESEVLIATDVAARGI 505
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 415 (151.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 84/213 (39%), Positives = 138/213 (64%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ + ++++ IT +G ++P P+R + E + D + +I++LG+ EPT +Q P+
Sbjct: 142 MTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPL 201
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHV-SAQPRLVQGEG----PIVLVLAPTRELAVQ 115
ALK RD++G+AETGSGKTL++L+P ++ S ++ E P+ L+LAPTRELA+Q
Sbjct: 202 ALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQ 261
Query: 116 IQEEALKFGSRAGIRSTCIYGGAPKGPQIRDL-RRGVEIVIATPGRLIDMLEAQHTNLRR 174
I +EA KF + G + I GG I + + GV +++ATPGRL+D +E + +L +
Sbjct: 262 ITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSK 321
Query: 175 VTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
LV+DEADRM+DMGFE + K++ ++ ++Q
Sbjct: 322 CYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQ 354
Score = 182 (69.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 47/139 (33%), Positives = 76/139 (54%)
Query: 206 RQTLYWSATWPREVETLARQFLRNP-YKVIIGSLELKAN--QSINQVVEVVTEAEKYNSM 262
R T+ ++AT VE L +++L +P Y I G+ E N QS + TEA K+N +
Sbjct: 369 RSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKL 428
Query: 263 FICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAE 322
++I+ V + I+IF K CD ++++L + + IHG K+Q R+ +
Sbjct: 429 I--KIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITN 486
Query: 323 FRSGRSPIMTATDVAARGL 341
FR+ S ++ ATDVAARG+
Sbjct: 487 FRNHESEVLIATDVAARGI 505
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 128/335 (38%), Positives = 195/335 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V G + P+ I F+EA D + ++K G+V+PTP+Q G P+ GRDL+ A+TG
Sbjct: 265 VDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTG 324
Query: 75 SGKTLSYLLPAFVHVS----AQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP A + + + P +++APTREL QI EA KF +R
Sbjct: 325 SGKTAAFLLPILQRFMTDGVAASKFSEIQEPEAIIVAPTRELINQIYLEARKFAYGTCVR 384
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+YGG G IR++ +G ++ ATPGRL D++ L +V YLVLDEADRMLDMG
Sbjct: 385 PVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRGKIGLSKVRYLVLDEADRMLDMG 444
Query: 191 FEPQIRKIVTQ----IRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSI 246
FEP++RK+V + +RQTL +SAT+P +++ +A FL+ Y + + +
Sbjct: 445 FEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFLKVDYIFLAVGV---VGGAC 501
Query: 247 NQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALS 306
+ V + V + ++Y+ +L++LL+ R ++F ETK+ D + L + S
Sbjct: 502 SDVEQTVVQVDQYSKRD--QLLELLRAT-GNERTMVFVETKRSADFIATFLCQEKISTTS 558
Query: 307 IHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
IHGD+ Q ER+ L++FR G P++ AT VAARGL
Sbjct: 559 IHGDREQREREKALSDFRLGHCPVLVATSVAARGL 593
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 128/336 (38%), Positives = 198/336 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V G DVP I F+EAN D + + K G+V+ TPIQ P+ + GRDL+ A+TG
Sbjct: 274 VEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTG 333
Query: 75 SGKTLSYLLPAFVHV---SAQPRLVQG-EGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ + Q + P +++APTREL QI +A KF +R
Sbjct: 334 SGKTAAFLLPILAHLMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDARKFSYGTCVR 393
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
IYGG ++ + G I+ ATPGRL+D++ + L ++ YLVLDEADRMLDMG
Sbjct: 394 PVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMG 453
Query: 191 FEPQIRKIVTQI----RPDRQTLYWSATWPREVETLARQFLRNPYK-VIIGSLELKANQS 245
F I ++ + +RQTL +SAT+P +++LAR+ L+ Y V++G + +
Sbjct: 454 FREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQV----GGA 509
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ V ++V E +++ +L+++L+E+ R ++F +TKK D + L + P+
Sbjct: 510 CSDVEQMVIEVDEFGKKD--KLMEILQEI-GSERTMVFVKTKKKADFIATFLCQEKVPST 566
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR+G+ P++ AT VAARGL
Sbjct: 567 SIHGDREQKERETALRDFRTGQCPVIVATSVAARGL 602
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 113/162 (69%), Positives = 130/162 (80%)
Query: 97 QGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIA 156
+G+GPI LVLAPTRELA Q+Q+ A ++ ++STCIYGGAPKGPQIRDL RGVEI IA
Sbjct: 2 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 61
Query: 157 TPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWP 216
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWP
Sbjct: 62 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 121
Query: 217 REVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEK 258
+EV LA FL++ + IG+LEL AN +I Q+V+V + EK
Sbjct: 122 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEK 163
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 146/347 (42%), Positives = 199/347 (57%)
Query: 14 EITVE--GHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIA 71
EI VE G DVP+PI +F + + ++ E I G+ PTP+Q P GRDL+ A
Sbjct: 216 EIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCA 275
Query: 72 ETGSGKTLSYLLPAFVHV-----SAQPRLVQGEG------PIVLVLAPTRELAVQIQEEA 120
+TGSGKT ++L+P + A R V G P LVL+PTREL++QI E+
Sbjct: 276 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNES 335
Query: 121 LKFGSRAGIRSTCIYGGAPK-GPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
KF R I S +YGG QI LR G I+IATPGRLID+++ + YLV
Sbjct: 336 RKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLV 395
Query: 180 LDEADRMLDMGFEPQIRKIVTQIR-PDRQ---TLYWSATWPREVETLARQFLRNPYKVI- 234
LDEADRMLDMGFEPQIR+IV R P ++ T +SAT+P+E++ LA+ FL+ Y +
Sbjct: 396 LDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLA 455
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+G + +++I Q + V E EK + L+ LL D S L+F ETK+G +
Sbjct: 456 VGRVG-STSENIMQKIVWVEEDEKRSY-----LMDLLDATGDSSLTLVFVETKRGASDLA 509
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
L + ++IHGD Q ER+ L FR+G +PI+ AT VAARGL
Sbjct: 510 YYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGL 556
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 139/350 (39%), Positives = 192/350 (54%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E E + R I VEG PIR F+E FP L +A G PTPIQ QG P
Sbjct: 151 MSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPT 210
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQIQ 117
L GRDLIGIA TGSGKTL ++LP + Q + + EGP L++ P+RELA Q
Sbjct: 211 VLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTH 270
Query: 118 EEALKFGSR---AG---IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
E + G IRS GG P + + RGV IV+ATPGRL+DML+ +
Sbjct: 271 EIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILT 330
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL +DEADRM+DMGFE +R I + + RQTL +SAT P++++ AR L P
Sbjct: 331 LDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPV 390
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ ++ Q VE V + K + L+ L++ +LIF E K+ D
Sbjct: 391 TINVGRAGA-ASMNVTQQVEYVKQEAK-----VVYLLDCLQKT--APPVLIFAEKKQDVD 442
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + +R G+ ++ ATDVA++GL
Sbjct: 443 CIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGL 492
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 125/309 (40%), Positives = 185/309 (59%)
Query: 35 PDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH-VSAQP 93
PD L +A+ G+ EPTPIQ Q P L+GRDL+ A+TG+GKT + LP H ++ QP
Sbjct: 10 PDI-LRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQP 68
Query: 94 RLVQGEGPI-VLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVE 152
+G P+ L+L PTRELA QI E + IRS ++GG PQ+ LR GV+
Sbjct: 69 H-AKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVD 127
Query: 153 IVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWS 212
+++ATPGRL+D+ L +V LVLDEADRMLDMGF IR+++T++ RQ L +S
Sbjct: 128 VLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFS 187
Query: 213 ATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLK 272
AT+ +++ LA + L NP ++ + + N + +QV + V +K L+ +
Sbjct: 188 ATFSDDIKALAEKLLHNPLEIEVA----RRNTASDQVTQHVHFVDKKRKR---ELLSHMI 240
Query: 273 EVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMT 332
+ ++L+FT TK G + + QL DG + +IHG+K+Q R LA+F+SG ++
Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300
Query: 333 ATDVAARGL 341
ATD+AARGL
Sbjct: 301 ATDIAARGL 309
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 136/360 (37%), Positives = 206/360 (57%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MTE + +++R I+ +G +PRP+R ++E+ L+ + + G+ +P+PIQ P+
Sbjct: 287 MTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPL 346
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG---EGPIVLVLAPTRELAVQIQ 117
L+ RD+IGIAETGSGKT +++LP ++S P + + EGP +V+APTRELA QI+
Sbjct: 347 GLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIE 406
Query: 118 EEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTY 177
EE +KF G R T I GG Q + +G EIVIATPGRLID LE ++ L + Y
Sbjct: 407 EETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNY 466
Query: 178 LVLDEADRMLDMGFEPQIRKIV-----TQIRP-------DRQTLYWSATWPREVETLARQ 225
+VLDEADRM+DMGFEPQ+ ++ + ++P D + +Y + +
Sbjct: 467 VVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVE 526
Query: 226 FLRNPYK----VIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRIL 281
L Y V+ K I+Q V ++ E+EK+ F RL KLL E+ + + I
Sbjct: 527 RLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKF---F--RLQKLLDELGEKTAI- 580
Query: 282 IFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+F TKK CD + + L G+ ++HG K+Q +R+ L FR+ R ++ ATDV RG+
Sbjct: 581 VFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGI 640
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 137/336 (40%), Positives = 193/336 (57%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ + G D P P+ F+EANF + I+K G+ + TP+Q P+ GRDL+ A+TG
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTG 214
Query: 75 SGKTLSYLLPAFVH-----VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGI 129
SGKT ++LLP V+A Q E P +++APTREL QI EA KF I
Sbjct: 215 SGKTAAFLLPIVDRMMKDGVTASAFQKQQE-PQCIIVAPTRELINQIFLEARKFVYGTCI 273
Query: 130 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDM 189
R IYGG G IR + +G I+ ATPGRL+D++E +L V YLVLDEADRMLDM
Sbjct: 274 RPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDM 333
Query: 190 GFEPQIRKIVTQIR-PD---RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQS 245
GF ++K+++ P RQTL +SAT+P EV+ LA +FL+ Y ++ A
Sbjct: 334 GFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSD 393
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V K + +LI++L+ G R ++F +TKK D + L + P+
Sbjct: 394 VQQNILQVPRLSKRD-----KLIEILQST-GGERTMVFVDTKKKADYLAAFLCQENLPST 447
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FRSG+ I+ AT VA+RGL
Sbjct: 448 SIHGDREQREREIALRDFRSGKCQILVATSVASRGL 483
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 137/336 (40%), Positives = 193/336 (57%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ + G D P P+ F+EANF + I+K G+ + TP+Q P+ GRDL+ A+TG
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTG 214
Query: 75 SGKTLSYLLPAFVH-----VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGI 129
SGKT ++LLP V+A Q E P +++APTREL QI EA KF I
Sbjct: 215 SGKTAAFLLPIVDRMMKDGVTASAFQKQQE-PQCIIVAPTRELINQIFLEARKFVYGTCI 273
Query: 130 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDM 189
R IYGG G IR + +G I+ ATPGRL+D++E +L V YLVLDEADRMLDM
Sbjct: 274 RPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDM 333
Query: 190 GFEPQIRKIVTQIR-PD---RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQS 245
GF ++K+++ P RQTL +SAT+P EV+ LA +FL+ Y ++ A
Sbjct: 334 GFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSD 393
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ Q + V K + +LI++L+ G R ++F +TKK D + L + P+
Sbjct: 394 VQQNILQVPRLSKRD-----KLIEILQST-GGERTMVFVDTKKKADYLAAFLCQENLPST 447
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FRSG+ I+ AT VA+RGL
Sbjct: 448 SIHGDREQREREIALRDFRSGKCQILVATSVASRGL 483
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 125/335 (37%), Positives = 197/335 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V G DVP I F+EAN + +A+ G+V+ TP+Q P+ + GRDL+ A+TG
Sbjct: 262 VDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTG 321
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP ++ + + +Q + P +++APTREL QI +A KF +R
Sbjct: 322 SGKTAAFLLPILSYMMNEGITASQYLQLQEPEAIIIAPTRELINQIYLDARKFSYGTCVR 381
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
+YGG +RD+ +G I+ ATPGRL+D++ + L ++ YLVLDEADRMLDMG
Sbjct: 382 PVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRMLDMG 441
Query: 191 FEPQIRKIVTQ----IRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSI 246
F P+I K++T+ + RQTL +SAT+P E+ LA +L++ + ++ L +
Sbjct: 442 FAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGL---VGGAC 498
Query: 247 NQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALS 306
+ V + V E + M +L+++LK + R +IF TKK D + L + + + S
Sbjct: 499 SDVAQTVLEMRENGKME--KLLEILKS-SEKERTMIFVNTKKKADFIAGYLCQEKFSSTS 555
Query: 307 IHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
IHGD+ Q +R+ L +FR+G+ ++ T VAARGL
Sbjct: 556 IHGDREQYQRESALWDFRTGKCTVIVCTAVAARGL 590
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 137/350 (39%), Positives = 196/350 (56%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E + R + I VEG +P PI+ F+E FP L + K G + PTPIQ QG P
Sbjct: 155 MSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPT 214
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 215 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 274
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S +R GG Q+ +R GV +++ATPGRL+D+L+ + +
Sbjct: 275 GILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS 334
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 335 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPV 394
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF E K D
Sbjct: 395 TINVGRAGA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVD 446
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 128/336 (38%), Positives = 193/336 (57%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+ V GHD P I F+E + I K G+ + TP+Q G P+ L GRDL+ A+TG
Sbjct: 254 VEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTPVQKYGIPIILAGRDLMACAQTG 313
Query: 75 SGKTLSYLLPAFVHVSAQ----PRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
SGKT ++LLP H+ R + P +++APTREL QI EA KF +R
Sbjct: 314 SGKTAAFLLPILAHMMRDGVTASRFKDQQEPECIIVAPTRELINQIFLEARKFSFGTCVR 373
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMG 190
IYGG G IR + +G I+ ATPGRL+D++ + L ++ YLVLDEADRMLDMG
Sbjct: 374 PVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKEKIGLGQIRYLVLDEADRMLDMG 433
Query: 191 FEPQIRKIVT----QIRPDRQTLYWSATWPR-EVETLARQFLRNPYKVIIGSLELKANQS 245
F P+++K+++ + RQTL +SAT+PR + A +FL+N ++ ++ +
Sbjct: 434 FGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWAGEFLKNLTICLVAVGQVGG--A 491
Query: 246 INQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 305
+ V + V + +Y+ +L+++L+ + + R ++F ETKK D + L +
Sbjct: 492 CSDVQQTVLQVGQYSKRE--KLVEILRNIGE-ERTMVFVETKKKADFIATFLCQEKISTT 548
Query: 306 SIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
SIHGD+ Q ER+ L +FR G+ P++ AT VAARGL
Sbjct: 549 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 584
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 119/306 (38%), Positives = 189/306 (61%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVS-AQPRLVQ 97
L I + G+VEPTP+Q Q P+ L+ RD++ A+TG+GKT + LP + ++P L +
Sbjct: 22 LRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFVSRPPLQR 81
Query: 98 GEGPIV--LVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVI 155
P++ L+L PTRELAVQ+ E +G +++T ++GG PQI LRRGV+I++
Sbjct: 82 SAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRRGVDILV 141
Query: 156 ATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATW 215
ATPGRL+D++ NL RV + VLDEADRMLDMGF P IR+I+ + RQ L +SAT+
Sbjct: 142 ATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQNLLFSATF 201
Query: 216 PREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM 275
+E++ L + L +P + + + N + ++ VV ++ L+ +
Sbjct: 202 SKEIKELTDKLLHSPALIEVA----RRNTAAARITHVVHPVDRQRKR---ELLSFMIGSK 254
Query: 276 DGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATD 335
+ ++L+FT TK G +++++QL DG + +IHG+K+Q+ R L +F+ G+ ++ ATD
Sbjct: 255 NWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATD 314
Query: 336 VAARGL 341
VAARGL
Sbjct: 315 VAARGL 320
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 119/306 (38%), Positives = 189/306 (61%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVS-AQPRLVQ 97
L I + G+VEPTP+Q Q P+ L+ RD++ A+TG+GKT + LP + ++P L +
Sbjct: 22 LRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFVSRPPLQR 81
Query: 98 GEGPIV--LVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVI 155
P++ L+L PTRELAVQ+ E +G +++T ++GG PQI LRRGV+I++
Sbjct: 82 SAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRRGVDILV 141
Query: 156 ATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATW 215
ATPGRL+D++ NL RV + VLDEADRMLDMGF P IR+I+ + RQ L +SAT+
Sbjct: 142 ATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQNLLFSATF 201
Query: 216 PREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVM 275
+E++ L + L +P + + + N + ++ VV ++ L+ +
Sbjct: 202 SKEIKELTDKLLHSPALIEVA----RRNTAAARITHVVHPVDRQRKR---ELLSFMIGSK 254
Query: 276 DGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATD 335
+ ++L+FT TK G +++++QL DG + +IHG+K+Q+ R L +F+ G+ ++ ATD
Sbjct: 255 NWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATD 314
Query: 336 VAARGL 341
VAARGL
Sbjct: 315 VAARGL 320
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 136/350 (38%), Positives = 195/350 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E R + I VEG +P PI+ F+E FP L + K G +PTPIQ QG P
Sbjct: 151 MSEARHNRVRKKYHILVEGEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPT 210
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 211 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 270
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S +R GG Q+ ++ GV +++ATPGRL+D+L+ + +
Sbjct: 271 GIIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVS 330
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 331 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPI 390
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF E K D
Sbjct: 391 TINVGRAGA-ASLDVVQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVD 442
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 443 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGL 492
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 137/350 (39%), Positives = 195/350 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E + R + I VEG +P PI+ F+E FP L + K G PTPIQ QG P
Sbjct: 155 MSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPT 214
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 215 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 274
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S +R GG Q+ +R GV +++ATPGRL+D+L+ + +
Sbjct: 275 GILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS 334
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 335 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPV 394
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF E K D
Sbjct: 395 TINVGRAGA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVD 446
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 137/350 (39%), Positives = 195/350 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E + R + I VEG +P PI+ F+E FP L + K G PTPIQ QG P
Sbjct: 155 MSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPT 214
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 215 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 274
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S +R GG Q+ +R GV +++ATPGRL+D+L+ + +
Sbjct: 275 GILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS 334
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 335 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPV 394
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF E K D
Sbjct: 395 TINVGRAGA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVD 446
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 137/350 (39%), Positives = 195/350 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E + R + I VEG +P PI+ F+E FP L + K G PTPIQ QG P
Sbjct: 182 MSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPT 241
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 242 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 301
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S +R GG Q+ +R GV +++ATPGRL+D+L+ + +
Sbjct: 302 GILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS 361
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 362 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPV 421
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF E K D
Sbjct: 422 TINVGRAGA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVD 473
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 474 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 523
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 137/350 (39%), Positives = 195/350 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E + R + I VEG +P PI+ F+E FP L + K G PTPIQ QG P
Sbjct: 173 MSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPT 232
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 233 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 292
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S +R GG Q+ +R GV +++ATPGRL+D+L+ + +
Sbjct: 293 GILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS 352
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 353 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPV 412
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF E K D
Sbjct: 413 TINVGRAGA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVD 464
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 465 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 514
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 137/350 (39%), Positives = 195/350 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E + R + I VEG +P PI+ F+E FP L + K G PTPIQ QG P
Sbjct: 155 MSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPT 214
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 215 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 274
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S +R GG Q+ +R GV +++ATPGRL+D+L+ + +
Sbjct: 275 GILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS 334
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 335 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPV 394
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF E K D
Sbjct: 395 TINVGRAGA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVD 446
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 136/350 (38%), Positives = 195/350 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E + R + I VEG +P PI+ F+E P L + K G + PTPIQ QG P
Sbjct: 155 MSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPT 214
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 215 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 274
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S +R GG Q+ +R GV +++ATPGRL+D+L+ + +
Sbjct: 275 GILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS 334
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 335 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPV 394
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF E K D
Sbjct: 395 TINVGRAGA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVD 446
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 130/349 (37%), Positives = 195/349 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ E +++ R + I VEG VPRPI F FP+ + G+ PTPIQ Q P+
Sbjct: 165 LREDQIENLRGQLGIVVEGRGVPRPIIDFGHCGFPETLNFNLKTAGYEVPTPIQMQMIPV 224
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRDL+ A+TGSGKT ++LLP LVQ + P LVL PTRELA+QI+ +A
Sbjct: 225 GLLGRDLLASADTGSGKTAAFLLPVITRA-----LVQSKAPSALVLTPTRELAIQIERQA 279
Query: 121 LKF-GSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ G +R+ + GG P PQ+ LR+ V+++IATPGRL+D+++ +L + +V
Sbjct: 280 KELMGGLPRMRTALLVGGLPAPPQLHRLRQRVQVIIATPGRLLDIMKQSSVDLGNIKIVV 339
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DEAD ML MGF+ Q+ ++ + D QT+ SAT P +E LA + L +P +V+ G
Sbjct: 340 VDEADTMLKMGFQEQVLDVLENVPQDCQTILVSATIPTRIEQLASRLLHDPVRVLAGEKN 399
Query: 240 LKANQSINQVVEVVTEAEKYNSMF-ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL- 297
L S+ Q+V V E K +F I KL K +L+F + K G D ++ +
Sbjct: 400 LPC-PSVRQIVLWVEEPAKKKKLFEILNDKKLFKPP-----VLVFVDCKLGADLLSEAVE 453
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
++ G + S+H +K+Q ER +L G ++ +T V RGL I+V
Sbjct: 454 KITGLKSTSMHSEKSQIERKTILEGLLEGDYDVVVSTGVLGRGLDLISV 502
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 135/350 (38%), Positives = 194/350 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
M+E + R + I VEG +P PI+ F+E P L + K G + PTPIQ QG P
Sbjct: 154 MSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPT 213
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLV---QGEGPIVLVLAPTRELAVQ-- 115
L GRD+IGIA TGSGKTL + LP + Q + + + EGP L++ P+RELA Q
Sbjct: 214 ILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTH 273
Query: 116 -IQE---EALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTN 171
I E L+ S + GG Q+ +R GV I++ATPGRL+D+L+ + +
Sbjct: 274 GILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKMVS 333
Query: 172 LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPY 231
L YL LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P
Sbjct: 334 LDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPV 393
Query: 232 KVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCD 291
+ +G A+ + Q VE V E K + L++ L++ +LIF + K D
Sbjct: 394 TINVGRAGA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAKKKADVD 445
Query: 292 QVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ L + G A++IHG K+Q ER + FR G+ ++ ATDVA++GL
Sbjct: 446 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 495
>DICTYBASE|DDB_G0292010 [details] [associations]
symbol:DDB_G0292010 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292010 GO:GO:0005524
EMBL:AAFI02000187 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
ProtClustDB:CLSZ2846571 RefSeq:XP_629765.1
ProteinModelPortal:Q54DV7 EnsemblProtists:DDB0184159 GeneID:8628441
KEGG:ddi:DDB_G0292010 InParanoid:Q54DV7 OMA:VESSCKP Uniprot:Q54DV7
Length = 777
Score = 412 (150.1 bits), Expect = 3.6e-53, Sum P(2) = 3.6e-53
Identities = 105/265 (39%), Positives = 157/265 (59%)
Query: 100 GPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDL--RRGVEIVIAT 157
GP+VL++ PTRELA Q++ S+ I S IYGG Q +D+ + EI+IAT
Sbjct: 386 GPMVLIIVPTRELAKQVESSCKPLRSKFNIHSIAIYGGVDANEQ-KDILGQEHNEIIIAT 444
Query: 158 PGRLIDMLEAQHTN---LRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSAT 214
PGRL+D+++ L V L+LDEADRML +GF Q++KI QIRPDRQTL +SAT
Sbjct: 445 PGRLVDLIQRSKEVVGLLGGVGMLILDEADRMLQLGFGDQLQKISEQIRPDRQTLMFSAT 504
Query: 215 WPREVETLARQFLRNPYKVII-------GSLELKANQSINQVVEVVTEAEK--YNSMFIC 265
+P+ ++ A+++L NP K+ + GS + ++++ QVV+ + E EK Y + FI
Sbjct: 505 FPQTMQDAAKKWLTNPLKIRVKSSSTNQGSTSI-ISKNVKQVVKPIAEKEKSKYLTTFIN 563
Query: 266 RLIKLLKEVM--DGSRILIFTETKKGC-------DQVTRQLRMDGWPALSIHGDKNQSER 316
++K KE++ + S ILIF T K +++ Q R + +IHGD Q ER
Sbjct: 564 SIMK--KELLLRNRSLILIFVNTIKSVKPILTVIEKMCDQFRERKYKCGAIHGDMKQFER 621
Query: 317 DWVLAEFRSGRSPIMTATDVAARGL 341
D V+ F+SG+ I+ ATD+ RG+
Sbjct: 622 DSVIDNFKSGKISILVATDILGRGI 646
Score = 171 (65.3 bits), Expect = 3.6e-53, Sum P(2) = 3.6e-53
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 3 ETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKL-----GFVEPTPIQAQG 57
E +K+ +A + +G ++PRPI F++ + P + I L PTP+Q+Q
Sbjct: 261 EMRIKI-KANVSTSFDGQEIPRPIITFEDQDLPLSMKKFIGFLTTKYPSITAPTPVQSQC 319
Query: 58 WPMALKGRDLIGIAETGSGKTLSYLLPAFVHV 89
WP L G+D++ IA+TGSGKTL YLLPA ++
Sbjct: 320 WPGILSGQDILSIAQTGSGKTLGYLLPAIPNI 351
Score = 43 (20.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVT---RQLRMD-GWPALSIHGDKNQSERDWVLAE 322
KLLK G +LI T++ QV + LR +++I+G + +E+ +L +
Sbjct: 378 KLLKNTNMGPMVLIIVPTRELAKQVESSCKPLRSKFNIHSIAIYGGVDANEQKDILGQ 435
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 115/314 (36%), Positives = 182/314 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + + L+ + G+ P+PIQAQ P + GRD++ A+TG+GKT + LP
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67
Query: 89 VSAQP-RLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDL 147
+S+ V L+L PTRELA QI E +G + S ++GG PQI L
Sbjct: 68 LSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIARL 127
Query: 148 RRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
R+GV++++ATPGRL+D+ + ++ +LDEADRMLDMGF I+K++T + DRQ
Sbjct: 128 RQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQ 187
Query: 208 TLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRL 267
L +SAT+ E+ LA+ + NP ++ + + N + +V + +T +K + L
Sbjct: 188 NLLFSATFSPEIRALAKGMVNNPLEISVDA----ENSTAEKVTQWLTAVDKKRKPAV--L 241
Query: 268 IKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGR 327
L+KE + ++L+FT+TK G +++T+ L +G A +IHG+K+Q R LA F+ G
Sbjct: 242 THLIKE-NNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGS 300
Query: 328 SPIMTATDVAARGL 341
I+ ATD+AARG+
Sbjct: 301 VKILVATDIAARGI 314
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 123/315 (39%), Positives = 184/315 (58%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F E + L+ +A G+ EPTP+QA P AL+ DL+ A+TG+GKT +++LPA
Sbjct: 3 FAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQR 62
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
+S+ P+ G GP VLVL PTRELA Q+ + +G+ +RS I GG P Q+R L
Sbjct: 63 LSSPPQ-GPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLLS 121
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
V+ ++ATPGRL+D+L+ + +L R+ LVLDEADRMLDMGF + +I RQT
Sbjct: 122 APVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATRQT 181
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L ++AT + LA + LR P ++ I + ++ I Q + V + N RL+
Sbjct: 182 LLFTATMDSAMARLAGRLLREPERIDIAGTKT-THEHIEQRLHVADDLHHKN-----RLL 235
Query: 269 KLLKEVMDGS--RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSG 326
+ L + D S R +IF+ TK+ + + +L+ G A ++HGD Q+ R+ +A + G
Sbjct: 236 RHL--ITDESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQG 293
Query: 327 RSPIMTATDVAARGL 341
R ++ ATDVAARGL
Sbjct: 294 RIRLLVATDVAARGL 308
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 127/303 (41%), Positives = 184/303 (60%)
Query: 42 IAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE-G 100
IA G+ PTPIQAQ P + GRD++G+A+TG+GKT ++ LP +H RL QGE G
Sbjct: 16 IAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALP-ILH-----RLQQGERG 69
Query: 101 PI-VLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 159
+ LV+APTRELA QI + + G + +RS +YGG PQ++ L+ G E+V+A PG
Sbjct: 70 RVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAEVVVACPG 129
Query: 160 RLIDMLEAQHT-NLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPRE 218
RL+D + AQ T +L R+ LVLDEAD+M DMGF P IR+++ + P RQTL +SAT P +
Sbjct: 130 RLLDHI-AQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFSATMPID 188
Query: 219 VETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS 278
+ TLA+ L +P V +G++ V + E++ + L++LL+ D
Sbjct: 189 IRTLAQDILVDPVTVQVGTVAPAVT-----VAHALYPVEQHLKTPL--LLELLRHT-DTE 240
Query: 279 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAA 338
+LIFT TK ++ QL G+ A S+ G+ +Q+ R L FR G I+ ATD+AA
Sbjct: 241 SVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAA 300
Query: 339 RGL 341
RG+
Sbjct: 301 RGI 303
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 520 (188.1 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 112/302 (37%), Positives = 183/302 (60%)
Query: 40 EVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE 99
+ +++ G+ P+PIQAQ P L G+D++ A+TG+GKT + LP ++ + G+
Sbjct: 14 KAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLAKGHKAKSGQ 73
Query: 100 GPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 159
LVL PTRELA Q+ E +G +RS ++GG P PQI LR GV++++ATPG
Sbjct: 74 TR-ALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLRHGVDVLVATPG 132
Query: 160 RLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREV 219
RL+D+++ ++ LVLDEADRMLDMGF I+KI+ + RQ L +SAT+ E+
Sbjct: 133 RLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFSDEI 192
Query: 220 ETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSR 279
LA+ + +P ++ + A ++ Q + V + +K +++ LI+L+K+ + +
Sbjct: 193 RELAKGLVNHPVEISVTPRNAAAT-TVKQWICPVDKTQK-SAL----LIQLIKQE-NWQQ 245
Query: 280 ILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAAR 339
+L+F+ TK G +++ + L A +IHG+K+Q R LA+F+SG ++ ATD+AAR
Sbjct: 246 VLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAAR 305
Query: 340 GL 341
GL
Sbjct: 306 GL 307
Score = 38 (18.4 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 12 RREITVEGHDVPRPIR 27
++ ++ +G+D P PI+
Sbjct: 13 QKAVSEQGYDTPSPIQ 28
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 126/349 (36%), Positives = 197/349 (56%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ E +++ + + I V+G DV RPI F+ FP+ + G+ PTPIQ Q P+
Sbjct: 178 LQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPV 237
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD++ A+TGSGKT ++LLP L + + P L+L PTRELA+QI+ +A
Sbjct: 238 GLLGRDVLASADTGSGKTAAFLLPVITRA-----LCESKTPSALILTPTRELAIQIENQA 292
Query: 121 LKFGSRAG-IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ S +++ + GG P PQ+ LR+ V+++IATPGRL+D+++ L + +V
Sbjct: 293 KELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVV 352
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DEAD ML MGF+ Q+ I+ + D QT+ SAT P +E LA Q L NP ++I G
Sbjct: 353 VDEADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKN 412
Query: 240 LKANQSINQVVEVVTEAEKYNSMF-ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL- 297
L + S+ Q++ V E K +F I KL K +L+F + K G D ++ +
Sbjct: 413 LPCS-SVRQIILWVEEPAKKKKLFEILNDKKLFKPP-----VLVFVDCKLGADLLSEAVQ 466
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
++ G ++SIH +K+Q+ER +L G ++ +T V RGL I+V
Sbjct: 467 KITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTGVLGRGLDLISV 515
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 126/349 (36%), Positives = 197/349 (56%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ E +++ + + I V+G DV RPI F+ FP+ + G+ PTPIQ Q P+
Sbjct: 178 LQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPV 237
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD++ A+TGSGKT ++LLP L + + P L+L PTRELA+QI+ +A
Sbjct: 238 GLLGRDVLASADTGSGKTAAFLLPVITRA-----LCESKTPSALILTPTRELAIQIENQA 292
Query: 121 LKFGSRAG-IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ S +++ + GG P PQ+ LR+ V+++IATPGRL+D+++ L + +V
Sbjct: 293 KELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVV 352
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DEAD ML MGF+ Q+ I+ + D QT+ SAT P +E LA Q L NP ++I G
Sbjct: 353 VDEADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKN 412
Query: 240 LKANQSINQVVEVVTEAEKYNSMF-ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL- 297
L + S+ Q++ V E K +F I KL K +L+F + K G D ++ +
Sbjct: 413 LPCS-SVRQIILWVEEPAKKKKLFEILNDKKLFKPP-----VLVFVDCKLGADLLSEAVQ 466
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
++ G ++SIH +K+Q+ER +L G ++ +T V RGL I+V
Sbjct: 467 KITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTGVLGRGLDLISV 515
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 130/349 (37%), Positives = 193/349 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ E +++ R + ITV G VPRPI F+ FP+ + G+ PTPIQ Q P+
Sbjct: 178 LREDQIENLRRQLGITVRGRGVPRPIVDFEHCGFPEALNRNLKASGYEVPTPIQMQMIPV 237
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD++ A+TGSGKT ++LLP + L Q + P LVL PTRELA+QI+ +A
Sbjct: 238 GLLGRDVLASADTGSGKTAAFLLPVILRA-----LSQSKSPSGLVLTPTRELAIQIERQA 292
Query: 121 LKFGSRAG-IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ S +R+ + GG P PQ LR+ ++++IATPGRL+D+++ + L + +V
Sbjct: 293 KELMSGLPCLRTALLVGGLPAPPQRHRLRQRIQVIIATPGRLLDIIKQRSVELGSIKIVV 352
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DEAD ML MGF+ Q+ ++ Q+ D QT+ SAT P VE LA Q LR+P + G
Sbjct: 353 VDEADTMLKMGFQQQVLDVLEQLPHDCQTVLASATIPASVEQLACQLLRDPVAITAGERN 412
Query: 240 LKANQSINQVVEVVTEAEKYNSMF-ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL- 297
L S+ Q+V V E K +F I KL K +L+F + K G D ++ +
Sbjct: 413 LPC-PSVRQIVLWVEEPAKKKKLFEILNDKKLFKPP-----VLVFVDCKLGADLLSEAVQ 466
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
++ G + S+H DK Q ER +L G ++ +T V RGL + V
Sbjct: 467 KITGLKSTSVHSDKTQMERKNILKGLLEGDYDVVVSTGVLGRGLDLVGV 515
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 135/332 (40%), Positives = 193/332 (58%)
Query: 15 ITVEGHDVPRPIRIFQEANF-PDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAET 73
IT D + F+E N PD LE I + F +PTPIQ++ P AL+G+D+IG+A+T
Sbjct: 111 ITTIDPDAELKFKTFKELNLVPDL-LESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQT 169
Query: 74 GSGKTLSYLLPAFVHVSAQPRLVQGEGP-IVLVLAPTRELAVQIQEEALKFGSRAGIRST 132
GSGKT ++ +P L + P LVLAPTREL QI++ GS G+RS+
Sbjct: 170 GSGKTAAFAIPIL------QSLWHAQQPYFALVLAPTRELTFQIKDTFDALGSSMGLRSS 223
Query: 133 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHT---NLRRVTYLVLDEADRMLDM 189
CI GG Q RDL R +++ATPGR++D LE HT +L+ + YLV+DEADR+LDM
Sbjct: 224 CIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLE--HTKGFSLKNLKYLVMDEADRLLDM 281
Query: 190 GFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQV 249
F P + KI+ I R T +SAT ++E L R L NP +V + S A+ + +
Sbjct: 282 DFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSM 341
Query: 250 VEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHG 309
+ +V + K N++ LI LL E M G I++FT T + R+ G+ A+ +HG
Sbjct: 342 M-LVNDGYK-NTI----LIHLLNEFM-GKSIIVFTRTVAHAQRTALLARILGFNAVPLHG 394
Query: 310 DKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+QS+R L +F+S ++ I+ ATDVAARGL
Sbjct: 395 QLSQSQRLGSLNKFKSNQANILVATDVAARGL 426
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 117/315 (37%), Positives = 186/315 (59%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + L +++LG PTPIQ Q P L+G+D++ A+TG+GKT ++ LP
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 89 VSAQP--RLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
QP R + LVL PTRELA Q+ + + ++ +YGG Q+
Sbjct: 68 FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
Query: 147 LRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDR 206
LR GV+I+IATPGRL+D + L +V LVLDEADRMLDMGF P +++++ ++ P R
Sbjct: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
Query: 207 QTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICR 266
QTL++SAT+ +++ +A + +R+P +V + A +++ Q+V V + K
Sbjct: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTA-ETVQQMVYPVDKKRKRE------ 240
Query: 267 LIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSG 326
L+ L + ++L+FT+T++G D + +L++DG A+SI+GDK+Q R L +F++G
Sbjct: 241 LLSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAG 300
Query: 327 RSPIMTATDVAARGL 341
+ + ATDVAARGL
Sbjct: 301 KVRALIATDVAARGL 315
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 117/315 (37%), Positives = 186/315 (59%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + L +++LG PTPIQ Q P L+G+D++ A+TG+GKT ++ LP
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 89 VSAQP--RLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
QP R + LVL PTRELA Q+ + + ++ +YGG Q+
Sbjct: 68 FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
Query: 147 LRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDR 206
LR GV+I+IATPGRL+D + L +V LVLDEADRMLDMGF P +++++ ++ P R
Sbjct: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
Query: 207 QTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICR 266
QTL++SAT+ +++ +A + +R+P +V + A +++ Q+V V + K
Sbjct: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTA-ETVQQMVYPVDKKRKRE------ 240
Query: 267 LIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSG 326
L+ L + ++L+FT+T++G D + +L++DG A+SI+GDK+Q R L +F++G
Sbjct: 241 LLSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAG 300
Query: 327 RSPIMTATDVAARGL 341
+ + ATDVAARGL
Sbjct: 301 KVRALIATDVAARGL 315
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 129/314 (41%), Positives = 179/314 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+ NF + + G+ EPTPIQAQ P L+G D+IG+A+TG+GKT +Y LP
Sbjct: 3 FESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQK 62
Query: 89 VSAQPRLVQGEGPI-VLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDL 147
+ + PR G + LVLAPTRELA QI E G RA IR IYGG QIR L
Sbjct: 63 MLSTPR-----GRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRL 117
Query: 148 RRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
R GV++V+A PGRL+D + ++ V L++DEADRM DMGF+P I+ I+ + Q
Sbjct: 118 RSGVDVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQ 177
Query: 208 TLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRL 267
TL +SAT P EV L + NP + IG+ + A+ S++ V V +K L
Sbjct: 178 TLLFSATMPPEVRKLTLETQTNPVTIQIGT-QAPAS-SVSHSVYPVKNHQKTPL-----L 230
Query: 268 IKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGR 327
I++LK S +LIF TK G + + ++ G+ S+ G+ +Q+ R V+ FR G
Sbjct: 231 IEILKTTETKS-VLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGN 289
Query: 328 SPIMTATDVAARGL 341
I+ ATD+AARGL
Sbjct: 290 FKILVATDIAARGL 303
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 122/349 (34%), Positives = 196/349 (56%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ E +++ + + I+V+G DV RPI F+ FP+ + + K G+ PTPIQ Q P+
Sbjct: 177 LKEDQIETLKQQLGISVQGQDVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPV 236
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD++ A+TGSGKT ++LLP + ++ + P L+L PTRELA+QI+ +A
Sbjct: 237 GLLGRDILASADTGSGKTAAFLLPVIIRAFSEDKT-----PSALILTPTRELAIQIERQA 291
Query: 121 LKFGSRAG-IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ S +++ + GG P PQ+ LR+ V+++IATPGRL+D+++ +L + +V
Sbjct: 292 KELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVSLSGIKIVV 351
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DEAD ML MGF+ Q+ ++ D QT+ SAT P +E L Q L NP ++I G
Sbjct: 352 VDEADTMLKMGFQQQVLDVLEHTPGDCQTILVSATIPDSIEQLTDQLLHNPVRIITGDKN 411
Query: 240 LKANQSINQVVEVVTEAEKYNSMF-ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL- 297
L S+ Q++ V + K +F I KL K +L+F + K G D ++ +
Sbjct: 412 LPC-ASVRQIILWVEDPAKKKKLFEILNDQKLFKPP-----VLVFVDCKLGADLLSEAVQ 465
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
++ G + SIH +K+Q ER +L G ++ +T V RGL + V
Sbjct: 466 KITGLNSTSIHSEKSQVERRDILKGLLEGDYEVVVSTGVLGRGLDLVNV 514
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/313 (38%), Positives = 180/313 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+E D L+ + +GF E TPIQA+ P AL+G+D+IG A+TG+GKT ++ LP
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
V VQG +V+APTRELA+Q+ EE K G +R IYGG QIR L+
Sbjct: 64 VDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGR++D + + L+ V +VLDEAD ML+MGF I I+T + QT
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P + +A +F+ P + + + E+ +I Q V E +K++ L
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTM-PNIQQFYLEVQEKKKFDV-----LT 232
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D+++ L + G+ A IHGD Q++R VL +F+ G
Sbjct: 233 RLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 292 EVLVATDVAARGL 304
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/313 (38%), Positives = 180/313 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+E D L+ + +GF E TPIQA+ P AL+G+D+IG A+TG+GKT ++ LP
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
V VQG +V+APTRELA+Q+ EE K G +R IYGG QIR L+
Sbjct: 64 VDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGR++D + + L+ V +VLDEAD ML+MGF I I+T + QT
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P + +A +F+ P + + + E+ +I Q V E +K++ L
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTM-PNIQQFYLEVQEKKKFDV-----LT 232
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D+++ L + G+ A IHGD Q++R VL +F+ G
Sbjct: 233 RLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 292 EVLVATDVAARGL 304
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/313 (38%), Positives = 180/313 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+E D L+ + +GF E TPIQA+ P AL+G+D+IG A+TG+GKT ++ LP
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
V VQG +V+APTRELA+Q+ EE K G +R IYGG QIR L+
Sbjct: 64 VDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGR++D + + L+ V +VLDEAD ML+MGF I I+T + QT
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P + +A +F+ P + + + E+ +I Q V E +K++ L
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTM-PNIQQFYLEVQEKKKFDV-----LT 232
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D+++ L + G+ A IHGD Q++R VL +F+ G
Sbjct: 233 RLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 292 EVLVATDVAARGL 304
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/313 (38%), Positives = 180/313 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+E D L+ + +GF E TPIQA+ P AL+G+D+IG A+TG+GKT ++ LP
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
V VQG +V+APTRELA+Q+ EE K G +R IYGG QIR L+
Sbjct: 64 VDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGR++D + + L+ V +VLDEAD ML+MGF I I+T + QT
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P + +A +F+ P + + + E+ +I Q V E +K++ L
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTM-PNIQQFYLEVQEKKKFDV-----LT 232
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D+++ L + G+ A IHGD Q++R VL +F+ G
Sbjct: 233 RLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 292 EVLVATDVAARGL 304
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/313 (38%), Positives = 180/313 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+E D L+ + +GF E TPIQA+ P AL+G+D+IG A+TG+GKT ++ LP
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
V VQG +V+APTRELA+Q+ EE K G +R IYGG QIR L+
Sbjct: 64 VDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGR++D + + L+ V +VLDEAD ML+MGF I I+T + QT
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P + +A +F+ P + + + E+ +I Q V E +K++ L
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTM-PNIQQFYLEVQEKKKFDV-----LT 232
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D+++ L + G+ A IHGD Q++R VL +F+ G
Sbjct: 233 RLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 292 EVLVATDVAARGL 304
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/313 (38%), Positives = 180/313 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+E D L+ + +GF E TPIQA+ P AL+G+D+IG A+TG+GKT ++ LP
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
V VQG +V+APTRELA+Q+ EE K G +R IYGG QIR L+
Sbjct: 64 VDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGR++D + + L+ V +VLDEAD ML+MGF I I+T + QT
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P + +A +F+ P + + + E+ +I Q V E +K++ L
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTM-PNIQQFYLEVQEKKKFDV-----LT 232
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D+++ L + G+ A IHGD Q++R VL +F+ G
Sbjct: 233 RLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 292 EVLVATDVAARGL 304
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/313 (38%), Positives = 180/313 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+E D L+ + +GF E TPIQA+ P AL+G+D+IG A+TG+GKT ++ LP
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
V VQG +V+APTRELA+Q+ EE K G +R IYGG QIR L+
Sbjct: 64 VDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGR++D + + L+ V +VLDEAD ML+MGF I I+T + QT
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P + +A +F+ P + + + E+ +I Q V E +K++ L
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTM-PNIQQFYLEVQEKKKFDV-----LT 232
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D+++ L + G+ A IHGD Q++R VL +F+ G
Sbjct: 233 RLL-DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 292 EVLVATDVAARGL 304
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 124/349 (35%), Positives = 197/349 (56%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ E +++ + + I V+G +V RPI F+ + P+ + K G+ PTPIQ Q P+
Sbjct: 177 LQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPV 236
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD++ A+TGSGKT ++LLP + L + + P L+L PTRELA+QI+ +A
Sbjct: 237 GLLGRDILASADTGSGKTAAFLLPVIMRA-----LFESKTPSALILTPTRELAIQIERQA 291
Query: 121 LKFGSRAG-IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ S +++ + GG P PQ+ L++ V+++IATPGRL+D+++ L V +V
Sbjct: 292 KELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVV 351
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DEAD ML MGF+ Q+ I+ I D QT+ SAT P +E LA Q L NP ++I G
Sbjct: 352 VDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKN 411
Query: 240 LKANQSINQVVEVVTEAEKYNSMF-ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL- 297
L ++ Q++ V + K +F I KL K +L+F + K G D ++ +
Sbjct: 412 LPC-ANVRQIILWVEDPAKKKKLFEILNDKKLFKPP-----VLVFVDCKLGADLLSEAVQ 465
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
++ G ++SIH +K+Q ER +L G ++ +T V RGL I+V
Sbjct: 466 KITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISV 514
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 124/349 (35%), Positives = 197/349 (56%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ E +++ + + I V+G +V RPI F+ + P+ + K G+ PTPIQ Q P+
Sbjct: 177 LQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPV 236
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD++ A+TGSGKT ++LLP + L + + P L+L PTRELA+QI+ +A
Sbjct: 237 GLLGRDILASADTGSGKTAAFLLPVIMRA-----LFESKTPSALILTPTRELAIQIERQA 291
Query: 121 LKFGSRAG-IRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ S +++ + GG P PQ+ L++ V+++IATPGRL+D+++ L V +V
Sbjct: 292 KELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVV 351
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DEAD ML MGF+ Q+ I+ I D QT+ SAT P +E LA Q L NP ++I G
Sbjct: 352 VDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKN 411
Query: 240 LKANQSINQVVEVVTEAEKYNSMF-ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL- 297
L ++ Q++ V + K +F I KL K +L+F + K G D ++ +
Sbjct: 412 LPC-ANVRQIILWVEDPAKKKKLFEILNDKKLFKPP-----VLVFVDCKLGADLLSEAVQ 465
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
++ G ++SIH +K+Q ER +L G ++ +T V RGL I+V
Sbjct: 466 KITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISV 514
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 116/303 (38%), Positives = 176/303 (58%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
L+ + LGF PTPIQ + P+ L+G +L+G A TG+GKT +YLLP R+ +G
Sbjct: 14 LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL------QRIQRG 67
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATP 158
+ VL++ PTRELA+Q+ +E K G +R+ +YGG QIR LR+GVE+++ TP
Sbjct: 68 KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTP 127
Query: 159 GRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPRE 218
GR++D + + + ++LDEAD MLDMGF I I+ + +QTL +SAT P
Sbjct: 128 GRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAP 187
Query: 219 VETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS 278
++T+ ++FL YK + K +I QV + E EK L+ +L +
Sbjct: 188 IKTIIKKFLGG-YKTVKLVGREKTVPAIRQVYYELPETEKIEG-----LVSILNSELP-I 240
Query: 279 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAA 338
+ ++F TKK D+V QL G+ A +HGD +Q ER + F++G++ ++ ATDVAA
Sbjct: 241 QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA 300
Query: 339 RGL 341
RGL
Sbjct: 301 RGL 303
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 116/303 (38%), Positives = 176/303 (58%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
L+ + LGF PTPIQ + P+ L+G +L+G A TG+GKT +YLLP R+ +G
Sbjct: 14 LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL------QRIQRG 67
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATP 158
+ VL++ PTRELA+Q+ +E K G +R+ +YGG QIR LR+GVE+++ TP
Sbjct: 68 KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTP 127
Query: 159 GRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPRE 218
GR++D + + + ++LDEAD MLDMGF I I+ + +QTL +SAT P
Sbjct: 128 GRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAP 187
Query: 219 VETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS 278
++T+ ++FL YK + K +I QV + E EK L+ +L +
Sbjct: 188 IKTIIKKFLGG-YKTVKLVGREKTVPAIRQVYYELPETEKIEG-----LVSILNSELP-I 240
Query: 279 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAA 338
+ ++F TKK D+V QL G+ A +HGD +Q ER + F++G++ ++ ATDVAA
Sbjct: 241 QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA 300
Query: 339 RGL 341
RGL
Sbjct: 301 RGL 303
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 120/344 (34%), Positives = 191/344 (55%)
Query: 15 ITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
I+++G D+P P+R ++EA P L+V+ K+ + EP+ IQ P+ L+ +DLIGIAETG
Sbjct: 237 ISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETG 296
Query: 75 SGKTLSYLLPAFVHVSAQPRLVQGE---GPIVLVLAPTRELAVQIQEEALKFGSRAGIRS 131
SGKT ++++P + +S P L + GP +VLAPTRELA QIQ E KF G R
Sbjct: 297 SGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRC 356
Query: 132 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGF 191
+ GG Q + +G IV+ATPGRL+D LE + L + TY+V+DEADRMLDMGF
Sbjct: 357 VSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGF 416
Query: 192 EPQIRKIVTQI------RPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLEL--KAN 243
E + KI++ + D L + + +T+ P + L
Sbjct: 417 EDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLIEPVM 476
Query: 244 QSINQVVEVVTEAEKYNSMFI--CRLIKLLKEVMDGSR----ILIFTETKKGCDQVTRQL 297
+I + + V E+ M + + ++E+++ +R I+IF K+ + + +QL
Sbjct: 477 LTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEAIAKQL 536
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
GW A+++HG K+Q +R+ + + R+ + I+ ATD+A RG+
Sbjct: 537 NAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGI 580
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 122/349 (34%), Positives = 192/349 (55%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+ + +V+ + + I ++G VPRPI F+ FP+ + G+ PTPIQ Q P+
Sbjct: 183 LQDEQVENLKLQLGIAIQGQQVPRPIIEFEHCGFPETLNSNLKNSGYEVPTPIQMQMIPV 242
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD++ A+TGSGKT ++LLP + V L + E P L+LAPTRELA+QI+ +A
Sbjct: 243 GLLGRDIVASADTGSGKTAAFLLPVIMKV-----LNETETPSALILAPTRELAIQIERQA 297
Query: 121 LKF-GSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ +R+ + GG P PQ+ L++ V+++IATPGRL+++L L + +V
Sbjct: 298 KELMAGLPNMRTVLLVGGLPLPPQLHRLKQSVKVIIATPGRLLEILRQSSVQLHGIKIVV 357
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DE D ML MGF+ Q+ I+ I D QT+ SAT P +E LA Q L N ++ IG
Sbjct: 358 VDEVDTMLKMGFQQQVLDILEDISHDHQTILVSATIPVGIEHLANQLLHNFVRITIGEKN 417
Query: 240 LKANQSINQVVEVVTEAEKYNSMF-ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL- 297
L + ++ Q++ V E K +F I KL K +L+F + K G D ++ +
Sbjct: 418 LPCS-NVRQIILWVEEPSKKKKLFEILNDKKLFKPP-----VLVFVDCKLGADLLSDAVH 471
Query: 298 RMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
++ G S+H +K+Q ER +L + ++ +T V RGL + V
Sbjct: 472 KITGLQCTSMHSEKSQVERTAILQGLLQEKYEVIVSTGVLGRGLDLVNV 520
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 117/313 (37%), Positives = 182/313 (58%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
FQ+ + I ++GF E TPIQAQ P+ L +D+IG A+TG+GKT ++ +P
Sbjct: 5 FQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
++ + +Q +V+APTRELA+Q+ EE K G R IYGG G QIR L+
Sbjct: 65 INPESPNIQA-----IVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALK 119
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGRL+D + + L+ V +VLDEAD ML+MGF I I++ + + QT
Sbjct: 120 KNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQT 179
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P ++ +A +F+ NP V + + E+ + +I Q V E +K+++ L
Sbjct: 180 LLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVS-NIQQFYLEVHERKKFDT-----LT 233
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D++T L + G+ A IHGD Q++R L +F+ G
Sbjct: 234 RLL-DIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAI 292
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 293 EVLVATDVAARGL 305
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 122/315 (38%), Positives = 186/315 (59%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + N P+ ++ +A GF + TPIQ + P++L G+D+ G A+TG+GKT ++L+ F
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
+ R + P ++LAPTREL VQI+++A G+ G IYGG Q L+
Sbjct: 63 LLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALK 122
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRP-D-R 206
G ++V+ TPGRLID L+ + +L+ + LV+DEADRM DMGF +R I+ ++ P D R
Sbjct: 123 EGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYDKR 182
Query: 207 QTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICR 266
Q L +SAT + V LA +F+ P KV + ++ A + + QV+ V EK+ +
Sbjct: 183 QNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAER-VEQVLYHVGRKEKFPLL---- 237
Query: 267 LIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSG 326
L L KE M+ R +IF TK+ + + +L + +P I GD Q +R +L +F+SG
Sbjct: 238 LGLLRKEGME--RTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSG 295
Query: 327 RSPIMTATDVAARGL 341
+ PIM ATDVA+RGL
Sbjct: 296 KLPIMIATDVASRGL 310
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 131/333 (39%), Positives = 184/333 (55%)
Query: 11 ARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGI 70
A+ E G + P P + F+E D E +G+ PTPIQ+Q P+AL+GRD+IG+
Sbjct: 31 AKDETQTSGEE-PAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGL 89
Query: 71 AETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIR 130
AETGSGKT ++ LP + P+ + G LVLAPTRELA QI + GS G+R
Sbjct: 90 AETGSGKTAAFALPMLQALMEAPQTLFG-----LVLAPTRELAYQISQAFETLGSTIGVR 144
Query: 131 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AQHTNLRRVTYLVLDEADRMLDM 189
I GG Q L + I++ATPGRL+D LE + +LR + YL +DEADR+LDM
Sbjct: 145 CAVIVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDM 204
Query: 190 GFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQV 249
F + KI+ + R T +SAT +VE+L R L NP +V + S Q+++ +
Sbjct: 205 DFGESLDKIIRILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSS----KYQTVSTL 260
Query: 250 VE-VVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIH 308
+ K+ +++ L+ LL E G +IFT T +V LR G+ A+ +H
Sbjct: 261 QSSYICIPHKHKNLY---LVYLLNEFA-GQSAIIFTTTVHETQRVAFMLRALGFGAIPLH 316
Query: 309 GDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
G +QS R L +FRS I+ ATDVAARGL
Sbjct: 317 GQLSQSARLGALGKFRSRSRDILVATDVAARGL 349
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 520 (188.1 bits), Expect = 1.8e-49, P = 1.8e-49
Identities = 107/214 (50%), Positives = 147/214 (68%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
MT+ + +++R IT +G +P PIR ++E + P + LEVI K G+ +PTPIQ Q P+
Sbjct: 352 MTDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPI 411
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGE----GPIVLVLAPTRELAVQI 116
L+ RD+IG+AETGSGKT ++L+P V ++ P++ + E GP ++LAPTRELA QI
Sbjct: 412 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQI 471
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVT 176
+EE +KFG GIR+ + GG + Q LR G EIVIATPGRLID+LE ++ L R T
Sbjct: 472 EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT 531
Query: 177 YLVLDEADRMLDMGFEPQIRKI-----VTQIRPD 205
Y+VLDEADRM+DMGFEP ++KI VT +PD
Sbjct: 532 YVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPD 565
Score = 231 (86.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 62/198 (31%), Positives = 106/198 (53%)
Query: 147 LRRGVEIVIATPGRLIDMLEAQHTNLRRVT-YLVLDEADRMLDMGFEPQ--IRKIVTQIR 203
L R +V+ R+IDM +++++ Y+ + D +P+ ++ +
Sbjct: 527 LSRCTYVVLDEADRMIDM--GFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKH 584
Query: 204 PDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMF 263
RQT+ ++AT P VE LAR +LR P V IGS K ++ + Q V +++E EK
Sbjct: 585 KYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVILMSEGEKRK--- 640
Query: 264 ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEF 323
+L+++L + I+IF KKGCD + + L G+ A ++HG K Q +R++ L+
Sbjct: 641 --KLLEVLASGFEPP-IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNL 697
Query: 324 RSGRSPIMTATDVAARGL 341
++G I+ ATDVA RG+
Sbjct: 698 KAGAKDILVATDVAGRGI 715
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 114/313 (36%), Positives = 181/313 (57%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
FQ+ N ++ I ++GF E TPIQAQ P+ L +D+IG A+TG+GKT ++ +P
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
++ + +Q +V+APTRELA+Q+ EE K G + IYGG G QIR L+
Sbjct: 65 INPESPNIQA-----IVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALK 119
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ I++ TPGRL+D + + L V +V+DEAD ML+MGF I I++ + + QT
Sbjct: 120 KNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQT 179
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P ++ +A +F+ P V + + E+ + +I Q V E +K+++ L
Sbjct: 180 LLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVS-NIQQFYLEVQERKKFDT-----LT 233
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
+LL ++ ++F TK+ D++ L + G+ A IHGD Q++R L +F+ G
Sbjct: 234 RLL-DIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAI 292
Query: 329 PIMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 293 EVLVATDVAARGL 305
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 438 (159.2 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 98/252 (38%), Positives = 150/252 (59%)
Query: 90 SAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRR 149
SA+ + G+ L+L PTRELA Q+ + +F I+S +YGG Q + L++
Sbjct: 81 SAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVVYGGGKMASQTKMLKQ 140
Query: 150 GVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTL 209
G+++++ATPGRL++ L ++ +L +V +LVLDEADRMLDMGF I K++ ++ QTL
Sbjct: 141 GLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMGFLTDIEKLLLAVKHKHQTL 200
Query: 210 YWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIK 269
+SAT+ V++LA Q L++P K I S E + I Q V VTE K L+
Sbjct: 201 MFSATFSDRVKSLANQLLKSP-KTISVSKENTTSGKIKQAVYWVTEERKRE------LLS 253
Query: 270 LLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSP 329
L V + ++L+F TK+ + + ++L++DG A HGDK Q R+ L +F G+
Sbjct: 254 ELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVR 313
Query: 330 IMTATDVAARGL 341
++ ATDVAARGL
Sbjct: 314 VLVATDVAARGL 325
Score = 93 (37.8 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLP 84
L+ + G+ TPIQ + P+ +G DL+ A+TG+GKT ++ LP
Sbjct: 13 LKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLP 58
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 132/347 (38%), Positives = 198/347 (57%)
Query: 2 TETEVKMYRARREITV----EGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQG 57
T + K+ +++ + TV E + F E N ++ L + +PTPIQ++
Sbjct: 52 TAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKA 111
Query: 58 WPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPI-VLVLAPTRELAVQI 116
P AL+G D+IG+A+TGSGKT ++ +P RL + P +LAPTRELA QI
Sbjct: 112 IPPALEGHDIIGLAQTGSGKTAAFAIPIL------NRLWHDQEPYYACILAPTRELAQQI 165
Query: 117 QEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AQHTNLRRV 175
+E GS G+RSTCI GG Q RDL R I+IATPGRL+D LE + +LR++
Sbjct: 166 KETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKL 225
Query: 176 TYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLY-WSATWPREVETLARQFLRNPYKVI 234
+LV+DEADR+LDM F P + +I+ I +T Y +SAT +++ L R L NP K
Sbjct: 226 KFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCA 285
Query: 235 IGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVT 294
+ + + + ++ Q + VV K N+ LI LL E + G ++IFT TK ++++
Sbjct: 286 VSN-KYQTVDTLVQTLMVVPGGLK-NTY----LIYLLNEFI-GKTMIIFTRTKANAERLS 338
Query: 295 RQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ + A ++HGD NQ++R L F++G+ I+ ATDVAARGL
Sbjct: 339 GLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGL 385
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 116/319 (36%), Positives = 179/319 (56%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + + I G+ +PTP+Q + P L+GRDL+ A+TG+GKT + LP
Sbjct: 3 FASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 89 V--SAQPRLVQGEGPI---VLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQ 143
+ + P Q GP VLVL PTRELA Q+ E + S CI+GG PQ
Sbjct: 63 LFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMNPQ 122
Query: 144 IRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIR 203
++ + RGV++++A PGRL+D+ +L V LVLDEADRMLDMGF ++K++ ++
Sbjct: 123 VQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARLP 182
Query: 204 PDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTE-AEKYNSM 262
RQ L +SAT+ ++ +LA + L NP ++ + N ++ ++ + V A +
Sbjct: 183 AKRQNLLFSATFSNDITSLAGKLLHNPERIEV----TPPNTTVERIEQRVFRLAANHKRS 238
Query: 263 FICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAE 322
+ LI V ++L+FT TK G +++ L G A++IHG+K+Q+ R LA+
Sbjct: 239 LLAHLIT----VGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALAD 294
Query: 323 FRSGRSPIMTATDVAARGL 341
F++G IM ATD+AARGL
Sbjct: 295 FKAGDVRIMVATDIAARGL 313
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 111/303 (36%), Positives = 178/303 (58%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
L+ I + G+ P+PIQ Q P L G+D++ A+TG+GKT + LP ++ P+ V+
Sbjct: 13 LKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAKGPK-VRA 71
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATP 158
L+L PTRELA QIQ+ + +G ++S ++GG PQ++ + +G +I++ATP
Sbjct: 72 NQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGADILVATP 131
Query: 159 GRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPRE 218
GRL+D+ ++ LVLDEADRMLDMGF I KI+ + RQ L +SAT+ E
Sbjct: 132 GRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTE 191
Query: 219 VETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS 278
+ LA+ + NP ++ + A +++ Q + + +K M L+KL+KE +
Sbjct: 192 IRELAKGLVNNPVEISVSPANSTA-RTVEQCI-YPADVKKKPDM----LVKLVKEG-NWQ 244
Query: 279 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAA 338
++L+F TK G +++ L G A +IHG+K+Q R LA+F++G I+ ATD+AA
Sbjct: 245 QVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAA 304
Query: 339 RGL 341
RG+
Sbjct: 305 RGI 307
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 111/303 (36%), Positives = 178/303 (58%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
L+ I + G+ P+PIQ Q P L G+D++ A+TG+GKT + LP ++ P+ V+
Sbjct: 13 LKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAKGPK-VRA 71
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATP 158
L+L PTRELA QIQ+ + +G ++S ++GG PQ++ + +G +I++ATP
Sbjct: 72 NQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGADILVATP 131
Query: 159 GRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPRE 218
GRL+D+ ++ LVLDEADRMLDMGF I KI+ + RQ L +SAT+ E
Sbjct: 132 GRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTE 191
Query: 219 VETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS 278
+ LA+ + NP ++ + A +++ Q + + +K M L+KL+KE +
Sbjct: 192 IRELAKGLVNNPVEISVSPANSTA-RTVEQCI-YPADVKKKPDM----LVKLVKEG-NWQ 244
Query: 279 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAA 338
++L+F TK G +++ L G A +IHG+K+Q R LA+F++G I+ ATD+AA
Sbjct: 245 QVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAA 304
Query: 339 RGL 341
RG+
Sbjct: 305 RGI 307
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 118/313 (37%), Positives = 182/313 (58%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
FQE ++ I ++GF E TPIQA+ P++L+ +D+IG A+TG+GKT ++ +P
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
V+ + VQ LV+APTRELA+Q+ EE K G+ +R IYGG QIR L+
Sbjct: 64 VNVKNSAVQA-----LVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALK 118
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
+ +++ TPGR+ID + L V +VLDEAD ML+MGF I I++ + +RQT
Sbjct: 119 KHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQT 178
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT P + +A +F+ P V + + E+ +I Q V E +K++ + RL+
Sbjct: 179 LLFSATMPDPIRRIAERFMNEPELVKVKAKEMTV-PNIQQYYLEVHEKKKFD--ILTRLL 235
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
++ ++F TK+ D++ L + G+ A IHGD +Q++R VL +F+ G
Sbjct: 236 ----DIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAI 291
Query: 329 PIMTATDVAARGL 341
I+ ATDVAARGL
Sbjct: 292 EILVATDVAARGL 304
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 113/314 (35%), Positives = 177/314 (56%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F P+ L + +GF T IQA P L G+D++G A+TG+GKT ++ LPA
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGS-RAGIRSTCIYGGAPKGPQIRDL 147
+ + P ++VLAPTRELA+Q+ E FG G+R +YGG GPQ + L
Sbjct: 77 IDTSIKK-----PQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQL 131
Query: 148 RRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
RG ++V+ TPGRL+D L + L + VLDEAD ML+MGF I+ I+ I Q
Sbjct: 132 ERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQ 191
Query: 208 TLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRL 267
+SAT P + +A +FL++P + + +++ KA +I Q V+ K ++
Sbjct: 192 MCLFSATMPPAIRKIANRFLKDPEHIKVAAVK-KAKANITQYAWKVSGITKMTAL----- 245
Query: 268 IKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGR 327
+ + EV++ ++IF T+ + +L G+PAL+++GD NQ++R+ + + +SG+
Sbjct: 246 -ERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGK 304
Query: 328 SPIMTATDVAARGL 341
S I+ ATDV ARGL
Sbjct: 305 SSILVATDVVARGL 318
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 120/304 (39%), Positives = 174/304 (57%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
LE + LG+ +P+PIQA+ P L GRD++G+A+TGSGKT ++ LP ++ P L
Sbjct: 18 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLD--PEL--- 72
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRA-GIRSTCIYGGAPKGPQIRDLRRGVEIVIAT 157
+ P +LVLAPTRELAVQ+ E F G+ +YGG Q+R LR+G +IV+ T
Sbjct: 73 KAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 132
Query: 158 PGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPR 217
PGRL+D L+ +L +++ LVLDEAD ML MGF + I+ QI QT +SAT P
Sbjct: 133 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPE 192
Query: 218 EVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG 277
+ + R+F++ P +V I S + I+Q V K + L++ L E D
Sbjct: 193 AIRRITRRFMKEPQEVRIQS-SVTTRPDISQSYWTVWGMRKNEA-----LVRFL-EAEDF 245
Query: 278 SRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVA 337
+IF TK +V L +G+ + +++GD NQ+ R+ L + GR I+ ATDVA
Sbjct: 246 DAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVA 305
Query: 338 ARGL 341
ARGL
Sbjct: 306 ARGL 309
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 342 (125.4 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 83/183 (45%), Positives = 106/183 (57%)
Query: 33 NFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH--VS 90
N + L I K+ + + TPIQ + + DLIG+A+TGSGKT YLLP H ++
Sbjct: 368 NLNELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLIN 427
Query: 91 AQPRLVQGEG--------------PIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYG 136
P+ E PI L+LAPTRELAVQI +A KF GI+ +YG
Sbjct: 428 DPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYG 487
Query: 137 GAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIR 196
G Q+ +L +G +I++ATPGRL D+LE L T+LVLDEADRMLDMGF PQIR
Sbjct: 488 GNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIR 547
Query: 197 KIV 199
IV
Sbjct: 548 SIV 550
Score = 201 (75.8 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 54/136 (39%), Positives = 78/136 (57%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ +SAT+ +E++ LA+++L +++G + N+ I Q + V E K N
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFVEEENKCNY---- 635
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
L+ LL E +G IL F ETK+ D + R L A+ IHGDK+Q ER+ L F+
Sbjct: 636 -LLNLLAENNNGLTIL-FVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKR 693
Query: 326 GRSPIMTATDVAARGL 341
G I+ ATDVAARGL
Sbjct: 694 GIKNILVATDVAARGL 709
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 342 (125.4 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 83/183 (45%), Positives = 106/183 (57%)
Query: 33 NFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH--VS 90
N + L I K+ + + TPIQ + + DLIG+A+TGSGKT YLLP H ++
Sbjct: 368 NLNELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLIN 427
Query: 91 AQPRLVQGEG--------------PIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYG 136
P+ E PI L+LAPTRELAVQI +A KF GI+ +YG
Sbjct: 428 DPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYG 487
Query: 137 GAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIR 196
G Q+ +L +G +I++ATPGRL D+LE L T+LVLDEADRMLDMGF PQIR
Sbjct: 488 GNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIR 547
Query: 197 KIV 199
IV
Sbjct: 548 SIV 550
Score = 201 (75.8 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 54/136 (39%), Positives = 78/136 (57%)
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
RQT+ +SAT+ +E++ LA+++L +++G + N+ I Q + V E K N
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFVEEENKCNY---- 635
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
L+ LL E +G IL F ETK+ D + R L A+ IHGDK+Q ER+ L F+
Sbjct: 636 -LLNLLAENNNGLTIL-FVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKR 693
Query: 326 GRSPIMTATDVAARGL 341
G I+ ATDVAARGL
Sbjct: 694 GIKNILVATDVAARGL 709
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 115/313 (36%), Positives = 173/313 (55%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F+ +F L I+ G+ + TPIQ Q P +G+D++ A+TG+GKT ++ LP
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
+ P VL+L PTRELA Q+ E + IYGG Q + L+
Sbjct: 63 MVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
RG +I++ATPGRL++ L A + +L V +LVLDEADRMLDMGF I+KI+ + RQ
Sbjct: 123 RGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQN 182
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT+ V+ LA + + P +VI + +++QVV V + K L+
Sbjct: 183 LLFSATFSSAVKKLANEMMIKP-QVISADKQNTTADTVSQVVYPVEQRRKRE------LL 235
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
L + ++L+FT T+ D + ++L +DG P+ +HG+K Q R L EF SG+
Sbjct: 236 SELIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKV 295
Query: 329 PIMTATDVAARGL 341
++ AT+VAARGL
Sbjct: 296 RVLVATEVAARGL 308
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 127/343 (37%), Positives = 188/343 (54%)
Query: 10 RARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIG 69
R + I VEG +P PI+ F+E FP L+ + K G V PTPIQ QG P L GRD+IG
Sbjct: 20 RKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIG 79
Query: 70 IAETGSGKTLSYLLPAFVH-VSAQPRL--VQGEGPIVLVLAPTRELAVQIQEEALKFGSR 126
IA TGSGKTL + LP + + + RL + EGP L++ P+ +A +++ +
Sbjct: 80 IAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSVNVAKHTHHGIIEYYCK 139
Query: 127 A----G---IRSTCIYGGAPKGPQIRDLRRGVEIV-IATPGRLIDMLEAQHTNLRRVTYL 178
G +R GG ++ +E+V +ATPGRL+D+L + +L YL
Sbjct: 140 LLEDEGAPQMRCALCIGGM-------SVKEQMEVVKLATPGRLMDLLNKKMVSLDICRYL 192
Query: 179 VLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSL 238
LDEADRM+DMGFE IR I + + RQTL +SAT P++++ A+ L P + +G
Sbjct: 193 ALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRA 252
Query: 239 ELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLR 298
A+ + Q VE V E K + L++ L++ +LIF E K D + L
Sbjct: 253 GA-ASLDVIQEVEYVKEEAK-----MVYLLECLQKTPPP--VLIFAEKKADVDAIHEYLL 304
Query: 299 MDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
+ G A++IHG K+Q ER + F+ G+ ++ ATDVA++GL
Sbjct: 305 LKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGL 347
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 112/318 (35%), Positives = 177/318 (55%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + + I G+ +PTP+Q + P L+GRDL+ A+TG+GKT + LP
Sbjct: 3 FASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 89 V--SAQPRLVQGEGPI---VLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQ 143
+ + P Q GP VLVL PTRELA Q+ + + S CI+GG PQ
Sbjct: 63 LFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMNPQ 122
Query: 144 IRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIR 203
++ + RGV++++A PGRL+D+ +L V LVLDEADRMLDMGF ++K++ ++
Sbjct: 123 VQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARLP 182
Query: 204 PDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMF 263
RQ L +SAT+ +++ LA + L NP ++ + N ++ ++ + V +
Sbjct: 183 AKRQNLLFSATFSKDITDLAGKLLHNPERIEV----TPPNTTVERIEQRVFRLPASHKR- 237
Query: 264 ICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEF 323
L+ L ++L+FT TK G +++ L G A++IHG+K+Q+ R LA+F
Sbjct: 238 --ALLAHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADF 295
Query: 324 RSGRSPIMTATDVAARGL 341
++G I+ ATD+AARGL
Sbjct: 296 KAGEVRILVATDIAARGL 313
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 115/304 (37%), Positives = 174/304 (57%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
++ +A+LG+ +PTPIQ + P L +D++ A+TG+GKT ++ LP + A +
Sbjct: 13 VDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHA 72
Query: 99 EGPI-VLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIAT 157
I LVL PTRELA+Q+Q+ +K+ IR YGG Q G++++IAT
Sbjct: 73 AKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAGIDVLIAT 132
Query: 158 PGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPR 217
PGRL+D L NL ++ LV DEADRMLDMGF +I+ ++ Q+ RQTL +SAT
Sbjct: 133 PGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLLFSATLDD 192
Query: 218 EVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG 277
+ + ++ LR+P ++ + A Q I Q V + K + F+ L++ +
Sbjct: 193 SIFSFSKNLLRDPKRIEVAKPNTTAAQ-IEQRVYAIDSDRK--TEFVSHLVRS----KNW 245
Query: 278 SRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVA 337
++LIF+ TK+G D++T QL G S HGD +Q R+ VL EF+ G ++ ATDVA
Sbjct: 246 QQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVA 305
Query: 338 ARGL 341
ARGL
Sbjct: 306 ARGL 309
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 115/304 (37%), Positives = 174/304 (57%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
++ +A+LG+ +PTPIQ + P L +D++ A+TG+GKT ++ LP + A +
Sbjct: 13 VDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHA 72
Query: 99 EGPI-VLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIAT 157
I LVL PTRELA+Q+Q+ +K+ IR YGG Q G++++IAT
Sbjct: 73 AKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAGIDVLIAT 132
Query: 158 PGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPR 217
PGRL+D L NL ++ LV DEADRMLDMGF +I+ ++ Q+ RQTL +SAT
Sbjct: 133 PGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLLFSATLDD 192
Query: 218 EVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG 277
+ + ++ LR+P ++ + A Q I Q V + K + F+ L++ +
Sbjct: 193 SIFSFSKNLLRDPKRIEVAKPNTTAAQ-IEQRVYAIDSDRK--TEFVSHLVRS----KNW 245
Query: 278 SRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVA 337
++LIF+ TK+G D++T QL G S HGD +Q R+ VL EF+ G ++ ATDVA
Sbjct: 246 QQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVA 305
Query: 338 ARGL 341
ARGL
Sbjct: 306 ARGL 309
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 123/316 (38%), Positives = 181/316 (57%)
Query: 27 RIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAF 86
+ F++ D E +LG+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP
Sbjct: 50 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 109
Query: 87 VHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
+ P+ + LVL PTRELA QI E+ GS G++S I GG Q
Sbjct: 110 NALLETPQRL-----FALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 164
Query: 147 LRRGVEIVIATPGRLIDMLE-AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPD 205
L + IVIATPGRLID LE + NLR + YLV+DEADR+L+M FE ++ KI+ I D
Sbjct: 165 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 224
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
R+T +SAT ++V+ L R L+NP K + S + + + + Q + K+ +
Sbjct: 225 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSS-KYQTVEKLQQYYLFIPS--KFKDTY-- 279
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
L+ +L E+ G+ +IF T + LR G+ A+ +HG +QS+R L +F++
Sbjct: 280 -LVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 337
Query: 326 GRSPIMTATDVAARGL 341
I+ ATDVA+RGL
Sbjct: 338 KARSILLATDVASRGL 353
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 117/348 (33%), Positives = 186/348 (53%)
Query: 1 MTETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPM 60
+TE +++ +A I G +V RP+ FQ FP + G+ PTP+Q Q P+
Sbjct: 144 LTEEQIERVKAELGIVSVGTEVCRPVIEFQHCRFPTVLERNLKAAGYEAPTPVQMQMVPV 203
Query: 61 ALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEA 120
L GRD+I A+TGSGKT+++LLP + + Q P L+L PTRELA+QI+E+A
Sbjct: 204 GLTGRDVIATADTGSGKTVAFLLPVVMR-ALQSESASPSCPACLILTPTRELAIQIEEQA 262
Query: 121 LKF-GSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLV 179
+ +R+ + GG P PQ+ L+ ++IVI TPGRL+++L+ + L V +V
Sbjct: 263 KELMRGLPNMRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVV 322
Query: 180 LDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLE 239
+DEAD ML MGF+ Q+ I+ Q+ D QTL SAT P + LA + +P + IG
Sbjct: 323 VDEADTMLKMGFQQQVLDILEQVPEDHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKN 382
Query: 240 LKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQL-R 298
++ Q+V V E K +F L E + +++F + K G D + + +
Sbjct: 383 QPC-ANVRQIVLWVEEPSKKKKLFEI----LNDEKLYQPPVVVFVDCKLGADLLCEAVQK 437
Query: 299 MDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLGRITV 346
+ ++IH DK Q ER+ ++ G+ ++ +T + RGL + V
Sbjct: 438 VMSLNTVAIHSDKMQWERNKIVKGLLEGQFDVVISTGILGRGLDLVNV 485
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 122/316 (38%), Positives = 181/316 (57%)
Query: 27 RIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAF 86
+ F++ D E +LG+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 87 VHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
+ P+ + LVL PTRELA QI E+ GS G++S I GG Q
Sbjct: 84 NALLETPQRL-----FALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 138
Query: 147 LRRGVEIVIATPGRLIDMLE-AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPD 205
L + I+IATPGRLID LE + NLR + YLV+DEADR+L+M FE ++ KI+ I D
Sbjct: 139 LAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
R+T +SAT ++V+ L R L+NP K + S + + + + Q + K+ +
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSS-KYQTVEKLQQYYIFIPS--KFKDTY-- 253
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
L+ +L E+ G+ +IF T + LR G+ A+ +HG +QS+R L +F++
Sbjct: 254 -LVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 311
Query: 326 GRSPIMTATDVAARGL 341
I+ ATDVA+RGL
Sbjct: 312 KARSILLATDVASRGL 327
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 122/316 (38%), Positives = 180/316 (56%)
Query: 27 RIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAF 86
+ F++ D E +LG+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP
Sbjct: 26 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 85
Query: 87 VHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
+ P+ + LVL PTRELA QI E+ GS G++ I GG Q
Sbjct: 86 NALLETPQRL-----FALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 140
Query: 147 LRRGVEIVIATPGRLIDMLE-AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPD 205
L + IVIATPGRLID LE + NLR + YLV+DEADR+L+M FE ++ KI+ I D
Sbjct: 141 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 200
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
R+T +SAT ++V+ L R L+NP K + S + + + + Q + K+ +
Sbjct: 201 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSS-KYQTVEKLQQYYLFIPS--KFKDTY-- 255
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
L+ +L E+ G+ +IF T + LR G+ A+ +HG +QS+R L +F++
Sbjct: 256 -LVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 313
Query: 326 GRSPIMTATDVAARGL 341
I+ ATDVA+RGL
Sbjct: 314 KARSILLATDVASRGL 329
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 122/316 (38%), Positives = 180/316 (56%)
Query: 27 RIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAF 86
+ F++ D E +LG+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP
Sbjct: 23 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 82
Query: 87 VHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
+ P+ + LVL PTRELA QI E+ GS G++ I GG Q
Sbjct: 83 NALLETPQRL-----FALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 137
Query: 147 LRRGVEIVIATPGRLIDMLE-AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPD 205
L + IVIATPGRLID LE + NLR + YLV+DEADR+L+M FE ++ KI+ I D
Sbjct: 138 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 197
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
R+T +SAT ++V+ L R L+NP K + S + + + + Q + K+ +
Sbjct: 198 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSS-KYQTVEKLQQYYLFIPS--KFKDTY-- 252
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
L+ +L E+ G+ +IF T + LR G+ A+ +HG +QS+R L +F++
Sbjct: 253 -LVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 310
Query: 326 GRSPIMTATDVAARGL 341
I+ ATDVA+RGL
Sbjct: 311 KARSILLATDVASRGL 326
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 107/296 (36%), Positives = 168/296 (56%)
Query: 46 GFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLV 105
G+ +PTPIQ + P + G DL+GIA+TG+GKT ++ LP ++ + L+
Sbjct: 21 GYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLI 80
Query: 106 LAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDML 165
L PTRELA QI + + G+++ +YGG + Q+ + G++I++ATPGRL+D++
Sbjct: 81 LTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLI 140
Query: 166 EAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQ 225
E N + + VLDEAD MLDMGF ++ I++++ RQTL +SAT P E+E LA
Sbjct: 141 ETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEA 200
Query: 226 FLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTE 285
L +P K+ I + E +NQ V + ++ K +F +L + D ++LIF +
Sbjct: 201 ILTDPTKIQI-TAETVTIDLVNQSVYHLDKSNKVPLLF-----NILTKA-DYEKVLIFCK 253
Query: 286 TKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
TK G D + + L A S+H K Q+ R+ L F+ ++ ATDVAARG+
Sbjct: 254 TKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVAARGI 309
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 122/316 (38%), Positives = 180/316 (56%)
Query: 27 RIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAF 86
+ F++ D E +LG+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 87 VHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
+ P+ + LVL PTRELA QI E+ GS G++ I GG Q
Sbjct: 84 NALLETPQRL-----FALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 138
Query: 147 LRRGVEIVIATPGRLIDMLE-AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPD 205
L + IVIATPGRLID LE + NLR + YLV+DEADR+L+M FE ++ KI+ I D
Sbjct: 139 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
R+T +SAT ++V+ L R L+NP K + S + + + + Q + K+ +
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSS-KYQTVEKLQQYYLFIPS--KFKDTY-- 253
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
L+ +L E+ G+ +IF T + LR G+ A+ +HG +QS+R L +F++
Sbjct: 254 -LVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 311
Query: 326 GRSPIMTATDVAARGL 341
I+ ATDVA+RGL
Sbjct: 312 KARSILLATDVASRGL 327
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 122/316 (38%), Positives = 180/316 (56%)
Query: 27 RIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAF 86
+ F++ D E +LG+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 87 VHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRD 146
+ P+ + LVL PTRELA QI E+ GS G++ I GG Q
Sbjct: 84 NALLETPQRL-----FALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 138
Query: 147 LRRGVEIVIATPGRLIDMLE-AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPD 205
L + IVIATPGRLID LE + NLR + YLV+DEADR+L+M FE ++ KI+ I D
Sbjct: 139 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 206 RQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFIC 265
R+T +SAT ++V+ L R L+NP K + S + + + + Q + K+ +
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSS-KYQTVEKLQQYYLFIPS--KFKDTY-- 253
Query: 266 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRS 325
L+ +L E+ G+ +IF T + LR G+ A+ +HG +QS+R L +F++
Sbjct: 254 -LVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 311
Query: 326 GRSPIMTATDVAARGL 341
I+ ATDVA+RGL
Sbjct: 312 KARSILLATDVASRGL 327
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 123/328 (37%), Positives = 184/328 (56%)
Query: 17 VEGHDVP--RPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETG 74
+E +VP R F++ D E +LG+ PT IQ + P+AL+GRD+IG+AETG
Sbjct: 13 LEAEEVPVVEEARSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETG 72
Query: 75 SGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCI 134
SGKT ++ LP + P+ + LVL PTRELA QI E+ GS G+ S I
Sbjct: 73 SGKTGAFALPILQALLDAPQRL-----FALVLTPTRELAFQISEQFEALGSSIGVHSAVI 127
Query: 135 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AQHTNLRRVTYLVLDEADRMLDMGFEP 193
GG Q L + I+IATPGRL+D LE + NLR + +LV+DEADR+L+M FE
Sbjct: 128 VGGIDSMSQSLALAKKPHIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFET 187
Query: 194 QIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVV 253
++ KI+ I DR+T +SAT ++V+ L R L+NP K + S + + + + Q +
Sbjct: 188 EVDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKNPVKCAVSS-KYQTVEKLQQYYIFI 246
Query: 254 TEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQ 313
K+ + L+ +L E+ G+ +IF T + LR G+ A+ +HG +Q
Sbjct: 247 PS--KFKDSY---LVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQ 300
Query: 314 SERDWVLAEFRSGRSPIMTATDVAARGL 341
++R L +F++ I+ ATDVA+RGL
Sbjct: 301 NKRLGSLNKFKAKARSILLATDVASRGL 328
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 114/313 (36%), Positives = 186/313 (59%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + D ++ +A+LG+ +PT IQ Q P+ L+GRDLI A+TG+GKT S++LP
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
+ Q + + + L+L PTRELA+Q+ E+ ++G G++S ++GG + Q + L
Sbjct: 63 LR-QGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
GV++++ATPGRL+D+ + + +VLDEADRMLDMGF I KI+ + + Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT R+V LA+ +R+P+++ I + + + +I+Q + V + K S + LI
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQA-SKSNISQWLITVDKDTK--SALLSHLI 238
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
++ D + LIF ETK G ++ QL G A + H ++Q+ R +L +F+SG+
Sbjct: 239 N--EQQWD--QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKI 294
Query: 329 PIMTATDVAARGL 341
+ AT VAARG+
Sbjct: 295 KYLVATGVAARGI 307
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 114/313 (36%), Positives = 186/313 (59%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + D ++ +A+LG+ +PT IQ Q P+ L+GRDLI A+TG+GKT S++LP
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
+ Q + + + L+L PTRELA+Q+ E+ ++G G++S ++GG + Q + L
Sbjct: 63 LR-QGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
GV++++ATPGRL+D+ + + +VLDEADRMLDMGF I KI+ + + Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L +SAT R+V LA+ +R+P+++ I + + + +I+Q + V + K S + LI
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQA-SKSNISQWLITVDKDTK--SALLSHLI 238
Query: 269 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRS 328
++ D + LIF ETK G ++ QL G A + H ++Q+ R +L +F+SG+
Sbjct: 239 N--EQQWD--QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKI 294
Query: 329 PIMTATDVAARGL 341
+ AT VAARG+
Sbjct: 295 KYLVATGVAARGI 307
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/308 (36%), Positives = 183/308 (59%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
L I + G+ + T +Q Q P+AL G+D++ A+TG+GKT ++ LP ++A+P
Sbjct: 13 LNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQLAAKP----A 68
Query: 99 EGPIV--LVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIA 156
+ P++ LV+ PTRELA+Q+ K+ +++ +YGGA PQ + + +GV+I++A
Sbjct: 69 DKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQGVDILVA 128
Query: 157 TPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWP 216
TPGRL D++ + +L VT LV+DEADRMLD+GF I K+ I P QT+ +SAT+
Sbjct: 129 TPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTMLFSATYS 188
Query: 217 REVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD 276
V+ L+ + L P V + N + + V ++V +K R +LL E++
Sbjct: 189 DAVKQLSHKMLNQPQWVNVAE-----NTTASTVEQLVYRVDKR------RKAELLSELVG 237
Query: 277 GS---RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTA 333
+ ++L+F TK+ + + ++L +DG A HGDK Q R+ VL +F++G+ ++ A
Sbjct: 238 RNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVA 297
Query: 334 TDVAARGL 341
TDVAARGL
Sbjct: 298 TDVAARGL 305
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/308 (36%), Positives = 183/308 (59%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
L I + G+ + T +Q Q P+AL G+D++ A+TG+GKT ++ LP ++A+P
Sbjct: 13 LNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQLAAKP----A 68
Query: 99 EGPIV--LVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIA 156
+ P++ LV+ PTRELA+Q+ K+ +++ +YGGA PQ + + +GV+I++A
Sbjct: 69 DKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQGVDILVA 128
Query: 157 TPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWP 216
TPGRL D++ + +L VT LV+DEADRMLD+GF I K+ I P QT+ +SAT+
Sbjct: 129 TPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTMLFSATYS 188
Query: 217 REVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD 276
V+ L+ + L P V + N + + V ++V +K R +LL E++
Sbjct: 189 DAVKQLSHKMLNQPQWVNVAE-----NTTASTVEQLVYRVDKR------RKAELLSELVG 237
Query: 277 GS---RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTA 333
+ ++L+F TK+ + + ++L +DG A HGDK Q R+ VL +F++G+ ++ A
Sbjct: 238 RNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVA 297
Query: 334 TDVAARGL 341
TDVAARGL
Sbjct: 298 TDVAARGL 305
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 111/305 (36%), Positives = 181/305 (59%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHV-SAQPRLVQ 97
++ ++ G + PIQ A++GRD+IG A TG+GKTL++ +P + + +
Sbjct: 116 VKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGR 175
Query: 98 GEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIAT 157
G P+ LVLAPTRELA Q+++E + S + + C+YGG P G Q+R L GV++ + T
Sbjct: 176 GRNPLCLVLAPTRELARQVEKEFRE--SAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGT 233
Query: 158 PGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPR 217
PGR+ID+++ NL V ++VLDEAD+ML +GF + I+ ++ RQ++ +SAT P
Sbjct: 234 PGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPS 293
Query: 218 EVETLARQFLRNPYKV-IIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD 276
+ +L +++L NP V ++G + K I ++ A+ Y I + L+ E
Sbjct: 294 WIRSLTKKYLNNPLTVDLVGDSDQKLADGIT-TYSII--ADSYGRASI--IGPLVTEHAK 348
Query: 277 GSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDV 336
G + ++FT+TK+ D+++ L + ++HGD +QS+R+ LA FR G I+ ATDV
Sbjct: 349 GGKCIVFTQTKRDADRLSYALARS-FKCEALHGDISQSQRERTLAGFRDGHFNILVATDV 407
Query: 337 AARGL 341
AARGL
Sbjct: 408 AARGL 412
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 116/314 (36%), Positives = 176/314 (56%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + + L+ + + G+ PTPIQ + P L G D+ G+A+TG+GKT +++LP
Sbjct: 6 FADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQR 65
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
+S + P L+L PTRELA Q+ E K+G + + GG Q L+
Sbjct: 66 LSTGR--ARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQ 123
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
RGV+++IATPGRL+D + + V L++DEADRMLDMGF P I KI ++ +RQT
Sbjct: 124 RGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQT 183
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQ-VVEVVTEAEKYNSMFICRL 267
L +SAT+P +++ LA+ F ++P K+ + + + ++I+Q VV++ T K + R+
Sbjct: 184 LLFSATFPTDIQRLAKTFQKDPKKIEV-TRPAQTAETISQFVVKLPTNDGKARRTALRRV 242
Query: 268 IKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGR 327
I+ V +G ++F K D V L G A IHGD QS R L FR G+
Sbjct: 243 IEATN-VKNG---IVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGK 298
Query: 328 SPIMTATDVAARGL 341
++ A+DVAARGL
Sbjct: 299 LKLLVASDVAARGL 312
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 121/304 (39%), Positives = 167/304 (54%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
L +A LG+ E TPIQA P+ L G+D+I A+TGSGKT ++ + + A VQ
Sbjct: 16 LRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSRLDALSFRVQA 75
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRA-GIRSTCIYGGAPKGPQIRDLRRGVEIVIAT 157
LVL PTRELA Q+ +E + I+ I GG P GPQ+ L G +VI T
Sbjct: 76 -----LVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIGT 130
Query: 158 PGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPR 217
PGRL+D L +L + LVLDEADRMLDMGF+ I ++ P RQTL +SAT+P
Sbjct: 131 PGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLFSATYPD 190
Query: 218 EVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDG 277
+ ++ R P +V + E+ +I QV V ++ ++ ++L
Sbjct: 191 SIAAMSAGVQREPVEVSVD--EVHGEGAIEQVFYEVDSGQRIEAVE-----RILGHYRPE 243
Query: 278 SRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVA 337
S LIF TK C +V L + G+ AL+IHGD +Q ERD VL F + + ++ ATDVA
Sbjct: 244 SA-LIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVA 302
Query: 338 ARGL 341
ARGL
Sbjct: 303 ARGL 306
>UNIPROTKB|Q9KKW0 [details] [associations]
symbol:VCA0990 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GenomeReviews:AE003853_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:IGAKENA ProtClustDB:CLSK869861
EMBL:AE004426 PIR:H82390 RefSeq:NP_233374.1
ProteinModelPortal:Q9KKW0 DNASU:2612329 GeneID:2612329
KEGG:vch:VCA0990 PATRIC:20086502 Uniprot:Q9KKW0
Length = 428
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 114/303 (37%), Positives = 173/303 (57%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
++ + K EP+ IQ P L G+D+ +A TGSGKTL+Y LP + P
Sbjct: 35 IQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLERLKTSPEQQ-- 91
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATP 158
LVL PTRELA+Q+ E G+ G+ + C+ GG K Q L I++AT
Sbjct: 92 ----ALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALAENPNILVATT 147
Query: 159 GRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPRE 218
GRL D+ ++ L RVT LVLDEADR+LDMGF PQ++ + +Q RQT+ SAT+ +
Sbjct: 148 GRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMCSATFSDD 206
Query: 219 VETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS 278
++ A+Q +R P +V E NQ++ + + +V + K + L+ LLK+
Sbjct: 207 LKLKAQQLMRAPTQVSANP-ENSINQAVQETLYLVNKGSKTQA-----LVALLKQ-HQWP 259
Query: 279 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAA 338
++L+F K+ D +T++L G A +HGDK+QSER+ LAEF++G + ++ ATD+ A
Sbjct: 260 QVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLA 319
Query: 339 RGL 341
RG+
Sbjct: 320 RGI 322
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 116/307 (37%), Positives = 175/307 (57%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQ----PR 94
L IA LG+ +PT IQ + P+ L G+D+I A+TG+GKT S++LP +++Q +
Sbjct: 13 LNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQLNSQYKETGK 72
Query: 95 LVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIV 154
++ + L+L PTRELAVQ++ ++ I S +YGG Q + L GV+I+
Sbjct: 73 KLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQKQRLIWGVDIL 132
Query: 155 IATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSAT 214
+ATPGRL+DM + + + LVLDEADRMLDMGF I KI+ ++ RQ L +SAT
Sbjct: 133 VATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLPEHRQNLLFSAT 192
Query: 215 WPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEV 274
EV LA++ + P ++ IG+ + + I Q + V +A K S + +I
Sbjct: 193 MSEEVRGLAKRTIHKPVEISIGA-DKASKPKIEQWLVTVDKANK--SALLSHIIT----T 245
Query: 275 MDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTAT 334
+ + LIF ETK G ++ QL G A SIH + Q R+ +L +F+SG+ + AT
Sbjct: 246 QNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVAT 305
Query: 335 DVAARGL 341
+AARGL
Sbjct: 306 AIAARGL 312
>TIGR_CMR|VC_A0990 [details] [associations]
symbol:VC_A0990 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GenomeReviews:AE003853_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:IGAKENA ProtClustDB:CLSK869861
EMBL:AE004426 PIR:H82390 RefSeq:NP_233374.1
ProteinModelPortal:Q9KKW0 DNASU:2612329 GeneID:2612329
KEGG:vch:VCA0990 PATRIC:20086502 Uniprot:Q9KKW0
Length = 428
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 114/303 (37%), Positives = 173/303 (57%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
++ + K EP+ IQ P L G+D+ +A TGSGKTL+Y LP + P
Sbjct: 35 IQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLERLKTSPEQQ-- 91
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATP 158
LVL PTRELA+Q+ E G+ G+ + C+ GG K Q L I++AT
Sbjct: 92 ----ALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALAENPNILVATT 147
Query: 159 GRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPRE 218
GRL D+ ++ L RVT LVLDEADR+LDMGF PQ++ + +Q RQT+ SAT+ +
Sbjct: 148 GRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMCSATFSDD 206
Query: 219 VETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGS 278
++ A+Q +R P +V E NQ++ + + +V + K + L+ LLK+
Sbjct: 207 LKLKAQQLMRAPTQVSANP-ENSINQAVQETLYLVNKGSKTQA-----LVALLKQ-HQWP 259
Query: 279 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAA 338
++L+F K+ D +T++L G A +HGDK+QSER+ LAEF++G + ++ ATD+ A
Sbjct: 260 QVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLA 319
Query: 339 RGL 341
RG+
Sbjct: 320 RGI 322
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 121/318 (38%), Positives = 176/318 (55%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F E N L+ I + G+ PTPIQA P AL+GRD++GIA+TG+GKT S+ LP +
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLP-MIT 62
Query: 89 VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLR 148
+ A+ R + P LVL PTRELA Q+ E + + + GG Q +
Sbjct: 63 LLARGR-ARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALID 121
Query: 149 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQT 208
RGV+++IATPGRL+D E L V +V+DEADRMLDMGF P I +I + RQT
Sbjct: 122 RGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQT 181
Query: 209 LYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLI 268
L++SAT E+E + FL P ++ + + A+++I Q V + + + R +
Sbjct: 182 LFFSATMAPEIERITNTFLSAPARIEVAR-QATASETIEQGVVLFKGSRRDREASEKRAV 240
Query: 269 KLLKEVMDG-----SRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEF 323
L+ ++D + +IF K D V + L+ G+ A IHGD +QS+R L F
Sbjct: 241 --LRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGF 298
Query: 324 RSGRSPIMTATDVAARGL 341
R G+ ++ A+DVAARGL
Sbjct: 299 REGKLRLLVASDVAARGL 316
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 108/292 (36%), Positives = 176/292 (60%)
Query: 52 PIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHV-SAQPRLVQGEGPIVLVLAPTR 110
PIQ A++GRD+IG A TG+GKTL++ +P + + +G+ P LVLAPTR
Sbjct: 141 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHGRGKNPQCLVLAPTR 200
Query: 111 ELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHT 170
ELA Q+++E + S + + C+YGG P G Q+R+L G+++ + TPGR+ID+++
Sbjct: 201 ELARQVEKEFRE--SAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGAL 258
Query: 171 NLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNP 230
NL V ++VLDEAD+ML +GF + I+ ++ RQ++ +SAT P + +L +++L NP
Sbjct: 259 NLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNP 318
Query: 231 YKV-IIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMDGSRILIFTETKKG 289
+ ++G + K I + + A+ Y I + L+KE G + ++FT+TK+
Sbjct: 319 LTIDLVGDSDQKLADGIT-MYSIA--ADSYGRASI--IGPLVKEHGKGGKCIVFTQTKRD 373
Query: 290 CDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 341
D++ L + ++HGD +Q++R+ LA FR G I+ ATDVAARGL
Sbjct: 374 ADRLAFGLAKS-YKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGL 424
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 118/314 (37%), Positives = 177/314 (56%)
Query: 35 PDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPR 94
P+ V+A G+ EP+ IQ Q P+ L G D+IG A+TG+GKT ++ LP + R
Sbjct: 15 PNIVAAVVAT-GYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHRIDPSKR 73
Query: 95 LVQGEGPIVLVLAPTRELAVQIQEEALKFGSRA-GIRSTCIYGGAPKGPQIRDLRRGVEI 153
P L+LAPTRELA+Q+ + + G+ +YGGAP GPQ++ +R G +I
Sbjct: 74 -----EPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQI 128
Query: 154 VIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSA 213
V+ATPGRL D L L V +LVLDEAD ML +GF + I + RQT+ +SA
Sbjct: 129 VVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFSA 188
Query: 214 TWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKE 273
T P+ + +A + L++P V I S + + +I Q ++ A++ S ++ LL E
Sbjct: 189 TLPQSIRAIAERHLKDPKHVKIQS-KTQTVTAIEQA-HLLVHADQKTSA----VLSLL-E 241
Query: 274 VMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTA 333
V D +++F TK+ + L G+ A +++GD Q++R+ V+ + GR I+ A
Sbjct: 242 VEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVA 301
Query: 334 TDVAARGLG--RIT 345
TDVAARGL RIT
Sbjct: 302 TDVAARGLDVPRIT 315
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 114/305 (37%), Positives = 181/305 (59%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
LE ++ +G+ E TPIQAQ P L G D+IG +TGSGKT ++ L + + +Q
Sbjct: 13 LENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNKLDVKRFRIQ- 71
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRA--GIRSTCIYGGAPKGPQIRDLRRGVEIVIA 156
LVL PTRELA Q+ +E ++ +R ++ + GG P GPQI L G I++
Sbjct: 72 ----TLVLCPTRELADQVAQE-IRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVG 126
Query: 157 TPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWP 216
TPGR++D L+ +L + LVLDEADRML+MGF+PQ+ I+ Q +RQTL +SAT+P
Sbjct: 127 TPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFP 186
Query: 217 REVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD 276
+++++A+Q + NP V++ + +I Q + + +K + M +L+ LL+ +
Sbjct: 187 EQIQSIAKQIMYNP--VMVKAAVTHEKNTIEQHFYQLDD-DK-SRMQALQLL-LLEHKPE 241
Query: 277 GSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDV 336
+ ++F TK+ +V +L G+ L++HGD Q +RD L +F + + ++ ATDV
Sbjct: 242 SA--VVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDV 299
Query: 337 AARGL 341
AARGL
Sbjct: 300 AARGL 304
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 114/305 (37%), Positives = 181/305 (59%)
Query: 39 LEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQG 98
LE ++ +G+ E TPIQAQ P L G D+IG +TGSGKT ++ L + + +Q
Sbjct: 13 LENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNKLDVKRFRIQ- 71
Query: 99 EGPIVLVLAPTRELAVQIQEEALKFGSRA--GIRSTCIYGGAPKGPQIRDLRRGVEIVIA 156
LVL PTRELA Q+ +E ++ +R ++ + GG P GPQI L G I++
Sbjct: 72 ----TLVLCPTRELADQVAQE-IRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVG 126
Query: 157 TPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWP 216
TPGR++D L+ +L + LVLDEADRML+MGF+PQ+ I+ Q +RQTL +SAT+P
Sbjct: 127 TPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFP 186
Query: 217 REVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRLIKLLKEVMD 276
+++++A+Q + NP V++ + +I Q + + +K + M +L+ LL+ +
Sbjct: 187 EQIQSIAKQIMYNP--VMVKAAVTHEKNTIEQHFYQLDD-DK-SRMQALQLL-LLEHKPE 241
Query: 277 GSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGRSPIMTATDV 336
+ ++F TK+ +V +L G+ L++HGD Q +RD L +F + + ++ ATDV
Sbjct: 242 SA--VVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDV 299
Query: 337 AARGL 341
AARGL
Sbjct: 300 AARGL 304
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 114/314 (36%), Positives = 174/314 (55%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + L+ I + + EPT IQ Q P+ L D++ A+TG+GKT ++ LP
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 89 -VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDL 147
+S QP + LVL PTRELA Q+ + +G + YGG QI +L
Sbjct: 67 LISVQPCKPELRA---LVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISEL 123
Query: 148 RRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
+ GV+I+IATPGRL+D+L + +L + LV DEADRMLDMGF+ +I +I + +Q
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQ 183
Query: 208 TLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRL 267
TL +SAT+ ++ +++ L P V I KA + Q+V V +A++ L
Sbjct: 184 TLLFSATFADDIYKMSKNILVEPKMVEIDEKN-KAADDVEQLVYGV-DADRKRE-----L 236
Query: 268 IKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGR 327
L + ++L+FT TK+ D + +++ DG +L+IHGDK+Q R+ L EF+ G+
Sbjct: 237 TSFLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGK 296
Query: 328 SPIMTATDVAARGL 341
+ ATDVAARG+
Sbjct: 297 VRALIATDVAARGI 310
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 114/314 (36%), Positives = 174/314 (55%)
Query: 29 FQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVH 88
F + L+ I + + EPT IQ Q P+ L D++ A+TG+GKT ++ LP
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 89 -VSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSRAGIRSTCIYGGAPKGPQIRDL 147
+S QP + LVL PTRELA Q+ + +G + YGG QI +L
Sbjct: 67 LISVQPCKPELRA---LVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISEL 123
Query: 148 RRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQIRPDRQ 207
+ GV+I+IATPGRL+D+L + +L + LV DEADRMLDMGF+ +I +I + +Q
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQ 183
Query: 208 TLYWSATWPREVETLARQFLRNPYKVIIGSLELKANQSINQVVEVVTEAEKYNSMFICRL 267
TL +SAT+ ++ +++ L P V I KA + Q+V V +A++ L
Sbjct: 184 TLLFSATFADDIYKMSKNILVEPKMVEIDEKN-KAADDVEQLVYGV-DADRKRE-----L 236
Query: 268 IKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFRSGR 327
L + ++L+FT TK+ D + +++ DG +L+IHGDK+Q R+ L EF+ G+
Sbjct: 237 TSFLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGK 296
Query: 328 SPIMTATDVAARGL 341
+ ATDVAARG+
Sbjct: 297 VRALIATDVAARGI 310
WARNING: HSPs involving 641 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 347 0.00098 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 891
No. of states in DFA: 618 (66 KB)
Total size of DFA: 217 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.06u 0.08s 26.14t Elapsed: 00:00:01
Total cpu time: 26.11u 0.08s 26.19t Elapsed: 00:00:01
Start: Tue May 21 03:08:44 2013 End: Tue May 21 03:08:45 2013
WARNINGS ISSUED: 2