Citrus Sinensis ID: 019042

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
Protein Sequence
MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE
Secondary Structure (PSIPRED)
ccccccEEEEEEEEcccccccccccccEEEEEEcccccccccccEEEEEcEEEEccccccccccccccccccccccccccEEccEEEEEEEccccccccccEEEEccccEEEEEEccccccccccccccccHHHcccccccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEcccccccHHHHHHHHccccccEEccccccHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHccEEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEEHHHHcccHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEcccccccccccccEEEEEEEEEccccccccEEEEEEEEEEccccHccccccccccccccccccccEEEccEEEEEEEccccccccccEEEEEcccHEEEEEcccccEEEcccccccHHHHHHHcccccHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccHHHcccccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHHcccccEEEHHHHEccccccccccHHHHHHHHHHHEEcEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
mageeavsnKQVILSNyvtgfpkesdmkIITGsinlkvpegskdtVLLKNLYLscdpymrgrmskldkpsfvasfnpgeplsgygvskvldsthpnykkddlvwgltsweeysliqSPQHLIKIldtnvplsyytgilgmpgltaygglyelcspkkgeyVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNkfgfddafnykkepdldaalkrcfpegidIYFENVGGKMLDAVLLNMRIHGRIAVCGMisqynlekpegvHNLMQVVGKRIRmegflagdfyhqyPKFLELVMPAIKEGKLVYVEDIAEGlekapsalvgiftgqnvgkQLVVVAPE
Flexible Loop (DISEMBL)
mageeavsnkqvilsnyvtgfpkesdMKIITGsinlkvpegskdtVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE
Low Complexity Region (SEG)
MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE
Disordered region (IsUnstruct)
***********VILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRM*******FVASF*****LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV***
Disordered Region (DISOPRED)
*****AV*NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP*
Disordered Region (DISEMBL)
*********KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE
Disordered Region (DISPRO)
*******SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	347	2.2.26 [Sep-21-2011]
Q39173	343	NADP-dependent alkenal do	yes	no	0.979	0.991	0.714	1e-144
Q39172	345	NADP-dependent alkenal do	no	no	0.979	0.985	0.693	1e-141
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.979	0.994	0.657	1e-135
O34812	339	Putative NADP-dependent o	yes	no	0.951	0.973	0.428	7e-66
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.951	0.945	0.428	3e-64
P76113	345	NADPH-dependent curcumin	N/A	no	0.965	0.971	0.401	4e-63
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.925	0.975	0.419	2e-59
P97584	329	Prostaglandin reductase 1	yes	no	0.927	0.978	0.411	1e-58
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.922	0.972	0.403	6e-56
Q29073	329	Prostaglandin reductase 1	yes	no	0.927	0.978	0.394	1e-55

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  511 bits (1315), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/343 (71%), Positives = 291/343 (84%), Gaps = 3/343 (0%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
            +NKQVI  ++V+GFPKESD    T ++ L+VPEGSK +VL+KNLYLSCDPYMR RM K 
Sbjct: 2   TTNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSK-SVLVKNLYLSCDPYMRSRMGKP 60

Query: 67  DKPSFVA-SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHL-IKI 124
           D  S +A ++ PG+P+ GYGVS+V++S HP+YKK DL+WG+  WEEYS+I    H+  KI
Sbjct: 61  DPSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKI 120

Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
             T+VPLSYYTG+LGMPG+TAY G YE+CSPKKGE VYVSAASGAVGQLVGQFAK++GCY
Sbjct: 121 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCY 180

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVGSAGSKEKV+LLK KFGFDDAFNYK+E DL AALKRCFP+GID+YFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVL 240

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
           LNM  HGRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +YPKFLELV+P
Sbjct: 241 LNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLP 300

Query: 305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            IKEGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VV+A E
Sbjct: 301 RIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  502 bits (1292), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 240/346 (69%), Positives = 288/346 (83%), Gaps = 6/346 (1%)

Query: 6   AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSK 65
             +NKQVIL +YV+GFP ESD    T ++ L+VPEG+ ++VL+KNLYLSCDPYMR RM K
Sbjct: 2   TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMRIRMGK 60

Query: 66  LDKPSFVA---SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHL- 121
            D PS  A   ++ PG+P+ GYGVS++++S HP+YKK DL+WG+ +WEEYS+I    H  
Sbjct: 61  PD-PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAH 119

Query: 122 IKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV 181
            KI  T+VPLSYYTG+LGMPG+TAY G YE+CSPK+GE VYVSAASGAVGQLVGQ AK++
Sbjct: 120 FKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMM 179

Query: 182 GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD 241
           GCYVVGSAGSKEKV+LLK KFGFDDAFNYK+E DL AALKRCFP GIDIYFENVGGKMLD
Sbjct: 180 GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLD 239

Query: 242 AVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLEL 301
           AVL+NM +HGRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +Y KFLE 
Sbjct: 240 AVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEF 299

Query: 302 VMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           V+P I+EGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVVA E
Sbjct: 300 VLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  480 bits (1235), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 225/342 (65%), Positives = 287/342 (83%), Gaps = 2/342 (0%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           V NKQ++L+NY+ G  K+SD+ + T +I +++P+G    +L+KNLYLS +PY+  RM KL
Sbjct: 2   VMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGKL 61

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTS-WEEYSLIQSPQHLIKIL 125
           D P F  S  PG  +  YGVSKVLDSTHP+Y+K +L+WG  + WEEY+LIQ+P +L KI 
Sbjct: 62  DIPQF-DSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQ 120

Query: 126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
           D +VPLSYY GILGMPG+TAY G +E+CSPKKGE V+V+AA+G+VGQLVGQFAK+ GCYV
Sbjct: 121 DKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYV 180

Query: 186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL 245
           VGSAGSKEKV+LLKNKFGFDDAFNYK+E D D ALKR FPEGIDIYF+NVGGKML+AV+ 
Sbjct: 181 VGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVIN 240

Query: 246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPA 305
           NMR+HGRIAVCGM+SQY+L++PEGVHNL++++ K+IRM+GF+  D+YH YPKFLE+V+P 
Sbjct: 241 NMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPR 300

Query: 306 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           IKEGK+ YVEDI+EGLE APSAL+G++ G+NVG Q+V V+ E
Sbjct: 301 IKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 1

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score =  251 bits (640), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 147/343 (42%), Positives = 202/343 (58%), Gaps = 13/343 (3%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
            S +Q+ L+    G P   D +  T    + VPE  +  VL+K LY+S DPYMRGRM   
Sbjct: 3   ASQQQIQLARRPQGIPVHEDFRFET----IPVPEPKQGEVLVKTLYVSVDPYMRGRMQ-- 56

Query: 67  DKPSFVASFNPGEPLSGYGVSKVL-DSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKIL 125
           D  S+V  F   + LSG  +++V+ D  H   KK D+V G  SW+E+S + S   L KI 
Sbjct: 57  DTKSYVEPFALDKALSGGVIAEVVSDGNH--LKKGDIVIGNLSWQEFSAV-SESALRKID 113

Query: 126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
            +  P S Y GILGM GLTAY GL ++  PK+GE V VS A+GAVG  VGQ AK+ G  V
Sbjct: 114 TSLAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARV 173

Query: 186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL 245
           VG AGS EK++ LK +  FD+A NYK   D+  AL+   P+G+D+YF+NVGG + DAV+ 
Sbjct: 174 VGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMN 233

Query: 246 NMRIHGRIAVCGMISQYNLEKPE---GVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
            +    RI VCG IS YN E      G     +++  +  M+GF+  D+  ++ +  + +
Sbjct: 234 LLNEFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQL 293

Query: 303 MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA 345
              +K GKL Y E I EG E  P A +G+F G+N GKQL+ V+
Sbjct: 294 AEWLKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  245 bits (626), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/359 (42%), Positives = 206/359 (57%), Gaps = 29/359 (8%)

Query: 7   VSNKQVILSNYV---TGFP----------KESDMKIITGSINLKVPEGSKDTVLLKNLYL 53
           VSN  VI+  Y+    G+P          +E D++      N +V E  +  VLLKN+Y 
Sbjct: 2   VSNNAVIIKKYLDSTAGYPVIGEHLAFEKREFDLE------NAQVDE--ETPVLLKNIYT 53

Query: 54  SCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYS 113
           S DPY+R RM      S++     G+P     V+KV+ ST   YK    V  ++ WEEY+
Sbjct: 54  SVDPYLRMRMQSPKHASYIPPLELGKPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYT 113

Query: 114 LIQSPQHLIKILDTN----VPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGA 169
            + S Q L  +   N    +PL  + G LGMP  TAY GL  +  PK GE +Y+SAASGA
Sbjct: 114 FV-SKQALGFLQPINNPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIYISAASGA 172

Query: 170 VGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGID 229
           VGQ+ GQ AK +G +VVGS GS EK  +  +  G+D  FNYKKE    A L R  P+GID
Sbjct: 173 VGQMAGQLAKAMGLHVVGSVGSDEKFKICLDS-GYDSVFNYKKESPFKA-LPRLCPKGID 230

Query: 230 IYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG 289
           IYFENVGG+ +DAVL NM + GRI  CG ISQYN   P  V NL  V+ K + ++GF+  
Sbjct: 231 IYFENVGGETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVA 290

Query: 290 DFYHQY-PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           +   QY  ++ E +   I EGK+ Y  D+ +GLE AP A +G+  G+N GK +V +A E
Sbjct: 291 NILPQYQEQYFEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTIVKIADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3

 Score =  241 bits (616), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 140/349 (40%), Positives = 203/349 (58%), Gaps = 14/349 (4%)

Query: 3   GEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGR 62
           G++   N++ +L++   G P   + ++    +        +  VLL+ +YLS DPYMRGR
Sbjct: 2   GQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATP----GEGQVLLRTVYLSLDPYMRGR 57

Query: 63  MSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLI 122
           MS  D+PS+    + G  + G  VS+V++S HP+Y+  D V G + W++Y  I S   L+
Sbjct: 58  MS--DEPSYSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYD-ISSGDDLV 114

Query: 123 KILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG 182
           K+ D     S+  G+LGMPG TAY GL ++  PK+GE + V+AA+G VG  VGQ  KL G
Sbjct: 115 KLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKG 174

Query: 183 CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDA 242
           C VVG AG  EK        GFD   ++  + D    L +  P+GIDIY+ENVGGK+ DA
Sbjct: 175 CRVVGVAGGAEKCRHATEVLGFDVCLDHHAD-DFAEQLAKACPKGIDIYYENVGGKVFDA 233

Query: 243 VLLNMRIHGRIAVCGMISQYN-LEKPEGVHNL----MQVVGKRIRMEGF-LAGDFYHQYP 296
           VL  +    RI VCG++S YN  E P G   L      V+ KRIR++GF +A D+ H+  
Sbjct: 234 VLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIH 293

Query: 297 KFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA 345
           +F   +   +KE K+ Y E+I +GLE AP   +G+  G+N GK ++ VA
Sbjct: 294 EFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVVIRVA 342

Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 3

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score =  230 bits (586), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/341 (41%), Positives = 198/341 (58%), Gaps = 20/341 (5%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           V  K   L  +  GFP + + ++ T     ++P  +   VLL+ L+LS DPYMR    KL
Sbjct: 2   VQAKSWTLKKHFEGFPTDGNFELKT----TELPPLNNGEVLLEALFLSVDPYMRVAAKKL 57

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKI-- 124
            +         G+ + G  V++V++S +  + K  +V  L  W  +S I     L K+  
Sbjct: 58  KE---------GDRMMGEQVARVVESKNSAFPKGTIVAALLGWTSHS-ISDGNGLTKLPV 107

Query: 125 -LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC 183
                +PLS   G +GMPGLTAY GL ++C  K GE V VSAA+GAVG +VGQ AKL GC
Sbjct: 108 EWPDKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGC 167

Query: 184 YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAV 243
            VVG+AGS EKV  LK K GFD AFNYK    L+ AL+   P+G D YF+NVGG+  +AV
Sbjct: 168 KVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAV 226

Query: 244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV-GKRIRMEGFLAGDFYHQ-YPKFLEL 301
           +L M+  GRIA+CG ISQYN   P       +VV  +++RMEGF+   +  +   K L  
Sbjct: 227 ILQMKTFGRIAICGAISQYNRTGPCPQGPAPEVVIYQQLRMEGFIVNRWQGEVRQKALTE 286

Query: 302 VMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
           +M  + EGK+   E + EG EK P+A +G+  G+N+GK +V
Sbjct: 287 LMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score =  227 bits (578), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/340 (41%), Positives = 196/340 (57%), Gaps = 18/340 (5%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           V  K   L  +  GFP +S+ ++ T     ++P  +   VLL+ L+LS DPYMR    KL
Sbjct: 2   VQAKTWTLKKHFEGFPTDSNFELRT----TELPPLNNGEVLLEALFLSVDPYMRVAAKKL 57

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSP--QHLIKI 124
            +         G+ + G  V++V++S +  +    +V  L  W  +S+      + L   
Sbjct: 58  KE---------GDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAE 108

Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
               +PLS   G +GMPGLTAY GL ++C  K GE V V+AA+GAVG +VGQ AKL GC 
Sbjct: 109 WPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCK 168

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVG+AGS EKV  LK K GFD AFNYK    L+ AL+   P+G D YF+NVGG+  + V+
Sbjct: 169 VVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVI 227

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQV-VGKRIRMEGFLAGDFYHQ-YPKFLELV 302
           L M+  GRIA+CG ISQYN   P       +V + +++RMEGF+   +  +   K L  +
Sbjct: 228 LQMKTFGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVRQKALTDL 287

Query: 303 MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
           M  + EGK+ Y E I EG EK P+A +G+  G N+GK +V
Sbjct: 288 MNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score =  218 bits (555), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/342 (40%), Positives = 196/342 (57%), Gaps = 22/342 (6%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           V  K   L  +  G+P  SD ++ T    +++P      VLL+ LYL+ DPYMR  M+K 
Sbjct: 2   VHAKSWTLKKHFVGYPTNSDFELKT----VELPPLKDGEVLLEALYLTVDPYMR-IMAK- 55

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKIL- 125
                  S   G+ + G  V++V++S +  +    +V   + W  +S I + + L K+L 
Sbjct: 56  -------SLKEGDMMMGEQVARVVESKNSAFPTGTIVLAPSGWTTHS-ISNGEKLEKVLA 107

Query: 126 ---DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG 182
              DT +PLS   G +GMPGLTAY GL ++C  K GE V VSAA+GAVG +VGQ AKL G
Sbjct: 108 EWPDT-LPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKG 166

Query: 183 CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDA 242
           C VVG+AGS EKV  LK K GFD A NYK    L+ ALK   PEG D YF+NVGG+  + 
Sbjct: 167 CKVVGTAGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNV 225

Query: 243 VLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQ-VVGKRIRMEGFLAGDFYHQY-PKFLE 300
            +  M+  GRIA+CG IS YN   P       + ++ K + ++GF+   +  +   K L 
Sbjct: 226 AITQMKKFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVRQKALR 285

Query: 301 LVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
            ++  + EGK+ Y E + EG E  P+A +G+  G+N+GK +V
Sbjct: 286 DLLKWVSEGKIQYHEHVTEGFENMPAAFIGLLKGENLGKAIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q29073|PTGR1_PIG Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1

 Score =  217 bits (553), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 193/340 (56%), Gaps = 18/340 (5%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           V  K   L  +  G+P  S+ ++ T    +++P      VLL+ L+L+ DPYMR    KL
Sbjct: 2   VRAKSWTLKKHFVGYPTPSNFELKT----VELPPLKNGEVLLEALFLTVDPYMRIAARKL 57

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLI--QSPQHLIKI 124
            +         G+ + G  V++V++S +  +    +V  L  W  +S+   ++ + L+  
Sbjct: 58  KE---------GDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAE 108

Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
               +PLS   G +GMPGLTAY GL ++C  K GE V V+AA+GAVG +VGQ AKL GC 
Sbjct: 109 WPDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCK 168

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVG+AGS EKV  LK K+GFD AFNYK    L+  LK+  PEG D YF+NVGG+  +AV 
Sbjct: 169 VVGAAGSDEKVACLK-KYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSNAVT 227

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV-GKRIRMEGFLAGDFYHQ-YPKFLELV 302
             M+  GRIA+CG IS YN   P       +VV    +  +GF+   +  +   K L  +
Sbjct: 228 SQMKKFGRIAICGAISTYNRTGPPPPGPPPEVVIYNELCFQGFIVTRWQGEVRQKALRDL 287

Query: 303 MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
           +  + EGK+ Y E I EG E  P+A +G+  G+N+GK +V
Sbjct: 288 LKWVSEGKIQYHEHITEGFENMPAAFMGMLKGENLGKAIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
255577891	345	alcohol dehydrogenase, putative [Ricinus	0.988	0.994	0.801	1e-163
225434189	345	PREDICTED: NADP-dependent alkenal double	0.994	1.0	0.740	1e-151
224092856	345	predicted protein [Populus trichocarpa]	0.985	0.991	0.753	1e-149
308943732	347	alcohol dehydrogenase [Camellia sinensis	0.988	0.988	0.709	1e-147
225434197	345	PREDICTED: NADP-dependent alkenal double	0.994	1.0	0.726	1e-147
225434191	342	PREDICTED: NADP-dependent alkenal double	0.976	0.991	0.733	1e-145
6692816	343	allyl alcohol dehydrogenase [Nicotiana t	0.982	0.994	0.725	1e-145
444302246	351	Chain A, X-ray Crystal Structure Of A Do	0.982	0.971	0.725	1e-144
224117858	348	predicted protein [Populus trichocarpa]	0.985	0.982	0.717	1e-144
224117874	348	predicted protein [Populus trichocarpa]	0.985	0.982	0.711	1e-143

>gi|255577891|ref|XP_002529818.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530695|gb|EEF32567.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/343 (80%), Positives = 309/343 (90%)

Query: 5   EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMS 64
           E VSNKQV+L NYVTGFP+ESDM+IIT SI L+VPEG+ D VL+KNLYLSCDPYMRGRM+
Sbjct: 3   EEVSNKQVVLKNYVTGFPEESDMEIITSSIKLQVPEGTTDAVLVKNLYLSCDPYMRGRMT 62

Query: 65  KLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKI 124
           K D PSFV+SF PG+PL GYGV KVL+STHPNYKK DL WG T WEEYS+I SP+ LIKI
Sbjct: 63  KRDSPSFVSSFEPGKPLGGYGVVKVLESTHPNYKKGDLAWGFTGWEEYSVIVSPKLLIKI 122

Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
             T++PLSYYTGILGM G+TAY G +E+CSPKKGE+VYVSAASGAVGQLVGQFAK+ GCY
Sbjct: 123 EHTDLPLSYYTGILGMHGVTAYAGFFEVCSPKKGEFVYVSAASGAVGQLVGQFAKVSGCY 182

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVGSAGSKEKV++LKNKFGFDDAFNYK+EPDLDAALKR FPEGIDIYFENVGG+MLDAVL
Sbjct: 183 VVGSAGSKEKVDMLKNKFGFDDAFNYKEEPDLDAALKRYFPEGIDIYFENVGGEMLDAVL 242

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
           LNMRI GRIAVCGMISQYNL+KPEGVHNL  ++GKRIRMEGFLAGDFYH YP  L++V+P
Sbjct: 243 LNMRIRGRIAVCGMISQYNLDKPEGVHNLSAIIGKRIRMEGFLAGDFYHLYPNLLDMVIP 302

Query: 305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            IKEGK+VYVED+AEGLE AP+AL+GIF G+NVGKQLVVVA E
Sbjct: 303 YIKEGKIVYVEDVAEGLENAPTALIGIFRGRNVGKQLVVVARE 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 257/347 (74%), Positives = 303/347 (87%), Gaps = 2/347 (0%)

Query: 1   MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMR 60
           MA  EAVSNKQVI  +YV+GFPKESDM + T +I+LKVPEGS + VL+KNLYLSCDPYMR
Sbjct: 1   MADGEAVSNKQVIFRDYVSGFPKESDMYVTTSTISLKVPEGS-EAVLVKNLYLSCDPYMR 59

Query: 61  GRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQH 120
            RM  + + S+V  F PG P++GYGV+KVLDS HP+++  DLVWG+T WEEYSLI + + 
Sbjct: 60  SRMRNI-QGSYVEPFKPGSPITGYGVAKVLDSRHPDFRTGDLVWGITGWEEYSLITTDER 118

Query: 121 LIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKL 180
           L KI  T+VPLSYYTGILGM G+TAY G YE+CSPKKGEYV++SAASGAVGQLVGQFAKL
Sbjct: 119 LFKIQHTDVPLSYYTGILGMAGMTAYSGFYEICSPKKGEYVFISAASGAVGQLVGQFAKL 178

Query: 181 VGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKML 240
           +GCYVVGSAG+KEKV+LLKNKFGFD+AFNYK+E DL+A LKR FPEGIDIYFENVGGKML
Sbjct: 179 LGCYVVGSAGTKEKVDLLKNKFGFDEAFNYKEEQDLEACLKRYFPEGIDIYFENVGGKML 238

Query: 241 DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLE 300
           DAVL+NMR+HGRIAVCGMISQYNLE+PEGV NL  +V KRIRMEGFL  D+YH YPKFL+
Sbjct: 239 DAVLVNMRLHGRIAVCGMISQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYHLYPKFLD 298

Query: 301 LVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           L+MP I+EGK+VYVEDIAEGLE AP+AL+G+++G+NVGKQ+VVVA E
Sbjct: 299 LIMPYIREGKIVYVEDIAEGLESAPTALIGLYSGRNVGKQVVVVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092856|ref|XP_002309725.1| predicted protein [Populus trichocarpa] gi|222852628|gb|EEE90175.1| predicted protein [Populus trichocarpa]

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 260/345 (75%), Positives = 296/345 (85%), Gaps = 3/345 (0%)

Query: 4   EEAVSNKQVILSNYVTGFPKESDMKIIT-GSINLKVPEGSKDTVLLKNLYLSCDPYMRGR 62
           ++ VSNKQV L NYVTGFPKESDM+IIT  +I L+VPEG+KD VL+KNLYLSCDPYMR R
Sbjct: 3   DQEVSNKQVALKNYVTGFPKESDMQIITTNTIKLRVPEGTKDAVLVKNLYLSCDPYMRER 62

Query: 63  MSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLI 122
           MS  D     +SF  G+PL+GYGV+K+LDSTHPNYKK DL WG T WEEYSLI SP+ LI
Sbjct: 63  MSAGD--GGFSSFELGKPLTGYGVAKILDSTHPNYKKGDLAWGFTGWEEYSLIVSPRILI 120

Query: 123 KILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG 182
           KI   +VPLSYYTGILGMPG+TAY G YE+C+PKKGEYVY+SAASGAVGQ+VGQFAKL G
Sbjct: 121 KIEHADVPLSYYTGILGMPGMTAYAGFYEICTPKKGEYVYISAASGAVGQIVGQFAKLSG 180

Query: 183 CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDA 242
           CYVVGSAGSKEKV+LLKNKFGFD+AFNYK+EPDL AALKR FPEGIDIYFENVGGKMLDA
Sbjct: 181 CYVVGSAGSKEKVDLLKNKFGFDEAFNYKEEPDLTAALKRYFPEGIDIYFENVGGKMLDA 240

Query: 243 VLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
           VL NMR  GRIA CGMISQYNLEK EGVHNL  +V K+IRM+GFLA  +YH YPKFLE+ 
Sbjct: 241 VLANMRTLGRIAACGMISQYNLEKHEGVHNLTLIVWKQIRMQGFLAASYYHLYPKFLEMA 300

Query: 303 MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           +P IK+GK+VYVED AEGLE  P++L+ +FTGQNVGK+L+VVA E
Sbjct: 301 LPYIKQGKIVYVEDKAEGLESGPTSLLSLFTGQNVGKKLLVVARE 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|308943732|gb|ADO51748.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 244/344 (70%), Positives = 300/344 (87%), Gaps = 1/344 (0%)

Query: 4   EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRM 63
           EE V NKQ+IL  YV+GFPK SDM + TG+I+L++PEGSK+ +L+KNLYLSCDPYM  RM
Sbjct: 5   EEEVGNKQIILKEYVSGFPKGSDMVVKTGTIHLQLPEGSKNAILVKNLYLSCDPYMCRRM 64

Query: 64  SKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIK 123
            KL+  S+V SF PG P++G+GV++VLDS HPN+KK DL+WG T WEEY++I  P ++ K
Sbjct: 65  RKLED-SYVESFTPGSPITGFGVARVLDSGHPNFKKGDLIWGRTGWEEYTIITEPANVFK 123

Query: 124 ILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC 183
           I +T+VPLSYYTGILGM G+TAY G YE+CSPK+G+YV++SAASGAVGQLVGQFAKL+GC
Sbjct: 124 IQNTDVPLSYYTGILGMHGMTAYVGFYEICSPKQGDYVFISAASGAVGQLVGQFAKLLGC 183

Query: 184 YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAV 243
           YVVGSAG+KEKV+LLKNKFGFD+AFNYK+E DL+AALKR FP GI+IYFENVGGKMLDAV
Sbjct: 184 YVVGSAGTKEKVDLLKNKFGFDEAFNYKEEKDLEAALKRYFPNGINIYFENVGGKMLDAV 243

Query: 244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVM 303
           L NMR+H RIAVCGMISQYNLE+PEGVHNL  ++ KR+RMEGF+  D+YH YPKFLE+++
Sbjct: 244 LANMRLHSRIAVCGMISQYNLERPEGVHNLFCLITKRVRMEGFIVFDYYHLYPKFLEMIL 303

Query: 304 PAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           P IK GK+ YVED+AEGLE AP+AL+G+F+G+NVGKQ+VVVA E
Sbjct: 304 PCIKGGKITYVEDVAEGLESAPAALIGLFSGRNVGKQVVVVARE 347

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera]

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/347 (72%), Positives = 297/347 (85%), Gaps = 2/347 (0%)

Query: 1   MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMR 60
           MA  E VSNKQVI  +YV+GFPKESDM + T +I+LKVPEGSK  V++KNLYLSCDPYMR
Sbjct: 1   MADAEEVSNKQVIFRDYVSGFPKESDMYMTTSTISLKVPEGSK-AVVVKNLYLSCDPYMR 59

Query: 61  GRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQH 120
            RMS     S++ SF PG  +SGYGV+KVLDS HPN+ K DLVWG T WEEY+LI +P+ 
Sbjct: 60  PRMS-YTTDSYIHSFKPGSVISGYGVAKVLDSGHPNFSKGDLVWGFTGWEEYTLITAPES 118

Query: 121 LIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKL 180
           L KI + +VPLSYY GILGMPG+TAY G YE+CSPKKGEYVYVSAASGAVGQLVGQFAKL
Sbjct: 119 LFKIPNNDVPLSYYIGILGMPGITAYAGFYEICSPKKGEYVYVSAASGAVGQLVGQFAKL 178

Query: 181 VGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKML 240
           +GCYVVGSAGSKEKV+LLKNKFGFD+AFNYK+E DL A LKR FPEGIDIYFENVGG ML
Sbjct: 179 IGCYVVGSAGSKEKVDLLKNKFGFDEAFNYKEEQDLVACLKRYFPEGIDIYFENVGGPML 238

Query: 241 DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLE 300
           DAVL NMR+ GRIA CGMISQYNL+KP GV+NLM ++ K+I+M+GF+AG ++H YPKFLE
Sbjct: 239 DAVLANMRVQGRIAACGMISQYNLDKPVGVYNLMNIIKKQIKMQGFVAGSYFHLYPKFLE 298

Query: 301 LVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           +++P +KEGK+VYVEDIAEGLE AP AL+G+F+G+NVGKQ+V+VA E
Sbjct: 299 MILPHVKEGKVVYVEDIAEGLESAPQALIGLFSGRNVGKQVVLVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434191|ref|XP_002279426.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|296084343|emb|CBI24731.3| unnamed protein product [Vitis vinifera]

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 250/341 (73%), Positives = 292/341 (85%), Gaps = 2/341 (0%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           VSNKQVI  +Y++GFP ++DM I T +I+LKVPEGSK  VL+KNLYLSCDPYMR RM+  
Sbjct: 4   VSNKQVIFKDYISGFPTDADMYITTSTISLKVPEGSK-AVLVKNLYLSCDPYMRPRMT-Y 61

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILD 126
              S+V SF PG  + GYGV+KVLDS HPN+ K DLVWG T+WEEYSLI S + LIKI  
Sbjct: 62  TTDSYVDSFKPGSVIEGYGVAKVLDSGHPNFSKGDLVWGFTNWEEYSLITSTEMLIKIPT 121

Query: 127 TNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVV 186
           T+VPLSYYTGILGMPGLTAY G YE+C+PKKGEYVYVSAASGAVGQLVGQFAKL+GCYVV
Sbjct: 122 TDVPLSYYTGILGMPGLTAYAGFYEICTPKKGEYVYVSAASGAVGQLVGQFAKLLGCYVV 181

Query: 187 GSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLN 246
           GSAGSKEKV+LLKNKFGFD+AFNYK+E DL A LKR FPEGIDIYF+NVGGKMLDAVLLN
Sbjct: 182 GSAGSKEKVDLLKNKFGFDEAFNYKEETDLVACLKRYFPEGIDIYFDNVGGKMLDAVLLN 241

Query: 247 MRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAI 306
           MR+HGRIA CGMISQYNL+K EGV NL+ ++ K++RM+GF+   +YH YPK+LE+V+P I
Sbjct: 242 MRVHGRIAACGMISQYNLDKLEGVCNLINIIIKQVRMQGFVITSYYHLYPKYLEMVLPHI 301

Query: 307 KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           KEGK+VYVED  EGLE AP AL+G+F+G+NVGKQ+VVVA E
Sbjct: 302 KEGKIVYVEDTVEGLESAPQALIGLFSGRNVGKQVVVVARE 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 249/343 (72%), Positives = 298/343 (86%), Gaps = 2/343 (0%)

Query: 5   EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMS 64
           E VSNKQVIL NYVTG+PKESDM+I   +I LKVPEGS D V++KNLYLSCDPYMR RM 
Sbjct: 3   EEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSND-VVVKNLYLSCDPYMRSRMR 61

Query: 65  KLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKI 124
           K++  S+V SF PG P++GYGV+KVL+S  P ++K DLVWG+T WEEYS+I   Q L KI
Sbjct: 62  KIEG-SYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120

Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
            D +VPLSYYTGILGMPG+TAY G +E+CSPKKGE V+VSAASGAVGQLVGQFAK++GCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVGSAGSKEKV+LLK+KFGFD+AFNYK+E DL AALKR FP+GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
           +NM+++GRIAVCGMISQYNLE+ EGVHNL  ++ KRIRMEGFL  D+YH YPK+LE+V+P
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300

Query: 305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            IK GK+VYVED+A GLE AP+ALVG+F+G+N+GKQ+V+V+ E
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/343 (72%), Positives = 298/343 (86%), Gaps = 2/343 (0%)

Query: 5   EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMS 64
           E VSNKQVIL NYVTG+PKESDM+I   +I LKVPEGS D V++KNLYLSCDPYMR RM 
Sbjct: 3   EEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSND-VVVKNLYLSCDPYMRSRMR 61

Query: 65  KLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKI 124
           K++  S+V SF PG P++GYGV+KVL+S  P ++K DLVWG+T WEEYS+I   Q L KI
Sbjct: 62  KIEG-SYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120

Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
            D +VPLSYYTGILGMPG+TAY G +E+CSPKKGE V+VSAASGAVGQLVGQFAK++GCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVGSAGSKEKV+LLK+KFGFD+AFNYK+E DL AALKR FP+GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
           +NM+++GRIAVCGMISQYNLE+ EGVHNL  ++ KRIRMEGFL  D+YH YPK+LE+V+P
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300

Query: 305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            IK GK+VYVED+A GLE AP+ALVG+F+G+N+GKQ+V+V+ E
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa]

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/343 (71%), Positives = 291/343 (84%), Gaps = 1/343 (0%)

Query: 5   EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMS 64
           E VSNKQVI  +YV G  KESDM I T +I LKVPE   + VL+KNLYLSCDPYMR RM 
Sbjct: 7   EVVSNKQVIFKDYVPGVLKESDMYITTSTIKLKVPEDCTNGVLVKNLYLSCDPYMRNRMR 66

Query: 65  KLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKI 124
              + S+++   PG P+SG GV+KVLDS HP+YKK D +WG+T WEEYSLI + + L KI
Sbjct: 67  NF-QGSYISPLKPGSPISGRGVAKVLDSRHPDYKKGDFIWGMTGWEEYSLITATETLFKI 125

Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
            D +VPLSYYTGILGMPGLTAY G YE+CSPKKGE+V++SAASGAVGQLVGQFAKL+GCY
Sbjct: 126 HDKDVPLSYYTGILGMPGLTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCY 185

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVGSAGSK+KV+LLKNKFGFDDAFNYK+E DLDAALKR FP+GIDIYFENVGGKMLDAV+
Sbjct: 186 VVGSAGSKDKVDLLKNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKMLDAVV 245

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
           LNMR+ GRI+VCGM+SQYNLE+PEGVHNLM +V KRI MEGFL  DF+H +PK+L++V+P
Sbjct: 246 LNMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVPKRIHMEGFLVYDFFHLFPKYLDMVLP 305

Query: 305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            IK+GK+VYVEDIAEGLE AP+AL G+F G+N+GKQ+V V+ E
Sbjct: 306 YIKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVAVSHE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117874|ref|XP_002331653.1| predicted protein [Populus trichocarpa] gi|222874049|gb|EEF11180.1| predicted protein [Populus trichocarpa]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/343 (71%), Positives = 291/343 (84%), Gaps = 1/343 (0%)

Query: 5   EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMS 64
           E VSNKQVI  +YV+G  KESDM I T +I LKVPE   + VL+KNLYLSCDPYMR +M 
Sbjct: 7   EVVSNKQVIFKDYVSGALKESDMYITTSTIRLKVPEDCTNGVLVKNLYLSCDPYMRIQMR 66

Query: 65  KLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKI 124
              + S+ + F PG P+SG GV+KVLDS HP+YKK D +WG+T WEEYSLI + + L KI
Sbjct: 67  NF-QGSYFSPFKPGSPISGRGVAKVLDSRHPDYKKGDFIWGITGWEEYSLITATETLFKI 125

Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
            D +VPLSYYTGILGMPG+TAY G YE+CSPKKGE+V++SAASGAVGQLVGQFAKL+GCY
Sbjct: 126 HDKDVPLSYYTGILGMPGMTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCY 185

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVGSAGSK+KV+LLKNKFGFDDAFNYK+E DLDAALKR FP+GIDIYFENVGGK+LDAVL
Sbjct: 186 VVGSAGSKDKVDLLKNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKILDAVL 245

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
           LNMR+ GRI+VCGM+SQYNLE+PEGVHNLM +V KRI MEGFL   F+H +PK+L++V+P
Sbjct: 246 LNMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVLKRIHMEGFLVYYFFHLFPKYLDMVLP 305

Query: 305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            IK+GK+VYVEDIAEGLE AP+AL G+F G+N+GKQ+V V+ E
Sbjct: 306 YIKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVAVSRE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	0.976	0.988	0.716	8.8e-134
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	0.994	0.985	0.701	3.1e-131
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	0.974	0.979	0.697	4.5e-130
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	0.974	0.979	0.697	1.5e-129
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	0.997	0.985	0.693	2e-127
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.971	0.973	0.692	4.8e-126
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	0.979	0.994	0.657	1.6e-125
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	0.976	0.960	0.677	1.1e-124
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	0.974	0.957	0.675	4.4e-123
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.971	0.954	0.666	8.3e-122

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
 Identities = 245/342 (71%), Positives = 291/342 (85%)

Query:     8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD 67
             +NKQVI  ++V+GFPKESD    T ++ L+VPEGSK +VL+KNLYLSCDPYMR RM K D
Sbjct:     3 TNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSK-SVLVKNLYLSCDPYMRSRMGKPD 61

Query:    68 KPSFVA-SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHL-IKIL 125
               S +A ++ PG+P+ GYGVS+V++S HP+YKK DL+WG+  WEEYS+I    H+  KI 
Sbjct:    62 PSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQ 121

Query:   126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
              T+VPLSYYTG+LGMPG+TAY G YE+CSPKKGE VYVSAASGAVGQLVGQFAK++GCYV
Sbjct:   122 HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYV 181

Query:   186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL 245
             VGSAGSKEKV+LLK KFGFDDAFNYK+E DL AALKRCFP+GID+YFENVGGKMLDAVLL
Sbjct:   182 VGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLL 241

Query:   246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPA 305
             NM  HGRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +YPKFLELV+P 
Sbjct:   242 NMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPR 301

Query:   306 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
             IKEGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VV+A E
Sbjct:   302 IKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
 Identities = 244/348 (70%), Positives = 287/348 (82%)

Query:     2 AGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRG 61
             +G   V+NKQVIL +YVTGFPKESD+     +I+LK+PEGSK TVL+KNLYLSCDPYMR 
Sbjct:     4 SGNATVANKQVILRDYVTGFPKESDLIFTDSTIDLKIPEGSK-TVLVKNLYLSCDPYMRI 62

Query:    62 RMSKLDK--PSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQ 119
             RM K D    +    + PGEP+ G+ VSKV+DS HP+YKK DL+WGL  W EYSLI    
Sbjct:    63 RMGKPDPGTAALAPHYIPGEPIYGFSVSKVIDSGHPDYKKGDLLWGLVGWGEYSLITPDF 122

Query:   120 HLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAK 179
                KI  T+VPLSYYTG+LGMPG+TAY G YE+CSPKKGE V+VSAASGAVGQLVGQFAK
Sbjct:   123 SHYKIQHTDVPLSYYTGLLGMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAK 182

Query:   180 LVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM 239
             ++GCYVVGSAGS EKV+LLKNKFGFDDAFNYK EPDL+AALKRCFPEGIDIYFENVGGKM
Sbjct:   183 IMGCYVVGSAGSNEKVDLLKNKFGFDDAFNYKAEPDLNAALKRCFPEGIDIYFENVGGKM 242

Query:   240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFL 299
             LDAVLLNM++HGRIAVCGMISQYNLE  EGVHNL  V+ KRIR++GF+  D++ ++ KFL
Sbjct:   243 LDAVLLNMKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKFL 302

Query:   300 ELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
             + V+P I+EGK+ YVED+ EGLE  PSAL+G+F G+NVGKQL+ VA E
Sbjct:   303 DFVLPYIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVARE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1276 (454.2 bits), Expect = 4.5e-130, P = 4.5e-130
 Identities = 240/344 (69%), Positives = 288/344 (83%)

Query:     8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD 67
             +NKQVIL +YV+GFP ESD    T ++ L+VPEG+ ++VL+KNLYLSCDPYMR RM K D
Sbjct:     4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMRIRMGKPD 62

Query:    68 KPSFVA---SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHL-IK 123
              PS  A   ++ PG+P+ GYGVS++++S HP+YKK DL+WG+ +WEEYS+I    H   K
Sbjct:    63 -PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFK 121

Query:   124 ILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC 183
             I  T+VPLSYYTG+LGMPG+TAY G YE+CSPK+GE VYVSAASGAVGQLVGQ AK++GC
Sbjct:   122 IQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC 181

Query:   184 YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAV 243
             YVVGSAGSKEKV+LLK KFGFDDAFNYK+E DL AALKRCFP GIDIYFENVGGKMLDAV
Sbjct:   182 YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAV 241

Query:   244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVM 303
             L+NM +HGRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +Y KFLE V+
Sbjct:   242 LVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVL 301

Query:   304 PAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
             P I+EGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVVA E
Sbjct:   302 PHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
 Identities = 240/344 (69%), Positives = 285/344 (82%)

Query:     8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD 67
             +NKQV+L NYV+GFPKESD    T ++  K+P GS ++VL+KNLYLSCDPYMR RM K D
Sbjct:     4 TNKQVVLKNYVSGFPKESDFDFKTTTVEFKLPGGS-NSVLVKNLYLSCDPYMRIRMGKPD 62

Query:    68 KPSFVA---SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHL-IK 123
              PS  A   ++ PG+P+ GYGVS+V++S HP+YKK DL+WG+  WEEYS+I    H+  K
Sbjct:    63 -PSTAALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFK 121

Query:   124 ILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC 183
             I  T++PLSYYTG+LGMPG+TAY G YE+CSPK+GE VYVSAASGAVGQLVGQFAK++GC
Sbjct:   122 IQHTDIPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGC 181

Query:   184 YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAV 243
             YVVGSAGS EKV+LLK KFGFDDAFNYK+EPDL AALKRCFP GIDIYFENVGGKMLDAV
Sbjct:   182 YVVGSAGSTEKVDLLKTKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFENVGGKMLDAV 241

Query:   244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVM 303
             LLNM  HGRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF   DFY +Y KFL+ V+
Sbjct:   242 LLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKFLDFVL 301

Query:   304 PAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
             P IKEGK+ YVED+A+GLEK P ALVG+F G+NVGKQ+VV+A E
Sbjct:   302 PHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1251 (445.4 bits), Expect = 2.0e-127, P = 2.0e-127
 Identities = 244/352 (69%), Positives = 285/352 (80%)

Query:     1 MAGEEAVS--NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPY 58
             M   EAV+  NKQ+I  +YVTGFPKESD+KI T +I+L++PEGS  +VL+KNLYLSCDPY
Sbjct:     1 MTNAEAVTVTNKQIIFPDYVTGFPKESDLKITTTTIDLRLPEGST-SVLVKNLYLSCDPY 59

Query:    59 MRGRMSKLD--KPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQ 116
             MR  M K D    S V  +  G P+ G GVSKV+DS HP+YKK DL+WGL  WEEYS+I 
Sbjct:    60 MRICMGKPDPLSSSLVPPYKTGVPIIGLGVSKVIDSGHPDYKKGDLLWGLVGWEEYSVIT 119

Query:   117 SPQHL-IKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVG 175
                +   KI  T+VPLSYYTG+LGMPG+TAY G YE+CSPKKGE V+VSAASGAVGQLVG
Sbjct:   120 LTTYSHFKIEHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVG 179

Query:   176 QFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV 235
             QFAKL+GCYVVGSAGSKEKV LLK KFGFDDAFNYK+E D  AALKR FPEGIDIYFENV
Sbjct:   180 QFAKLMGCYVVGSAGSKEKVYLLKTKFGFDDAFNYKEEKDFSAALKRYFPEGIDIYFENV 239

Query:   236 GGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY 295
             GGKMLDAVL+NM++HGR+AVCGMISQYNL  PEGVHNL  ++ KRI+++GF   DFY +Y
Sbjct:   240 GGKMLDAVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKY 299

Query:   296 PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
             PKFL+ V+P I+EGK+ YVEDIAEG E  PSAL+G+F G+NVGKQL VVA E
Sbjct:   300 PKFLDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
 Identities = 236/341 (69%), Positives = 284/341 (83%)

Query:     9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD- 67
             NKQV+L +YVTGF KESD+ I + +I+L+V +GS  T L+KNLYLSCDPYMR RM K D 
Sbjct:     6 NKQVVLLDYVTGFAKESDLVITSTTIDLRVLKGSM-TALVKNLYLSCDPYMRNRMRKPDP 64

Query:    68 -KPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHL-IKIL 125
               P+   SF PG+P+SG+GVSKV+DS H +Y++ DL+WG   WEEYS+I    +L  KI 
Sbjct:    65 LSPATAQSFTPGKPISGFGVSKVIDSGHSDYEEGDLIWGAVGWEEYSVITPIPNLHFKIH 124

Query:   126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
              TN PLSYYTG+LGMPG+TAY G YE+C+PKKG+ V+VSAASGAVGQLVGQFAKL+GCYV
Sbjct:   125 HTNFPLSYYTGLLGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMGCYV 184

Query:   186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL 245
             VGSAGSKEKV+LLKNKFGFDDAFNYK+E +L  ALKRCFPEGIDIYFENVGGKMLDAV+L
Sbjct:   185 VGSAGSKEKVDLLKNKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENVGGKMLDAVIL 244

Query:   246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPA 305
             NMR HGRIA CGMISQYNL+ PEG++ L  +  KRIR+EGF   D++H+Y +FLE V+P 
Sbjct:   245 NMRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEFLEFVVPY 304

Query:   306 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP 346
             IKEGK+ YVED+A+GLE AP+ALVG+F G+NVGKQLVVV+P
Sbjct:   305 IKEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLVVVSP 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 1233 (439.1 bits), Expect = 1.6e-125, P = 1.6e-125
 Identities = 225/342 (65%), Positives = 287/342 (83%)

Query:     7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
             V NKQ++L+NY+ G  K+SD+ + T +I +++P+G    +L+KNLYLS +PY+  RM KL
Sbjct:     2 VMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGKL 61

Query:    67 DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTS-WEEYSLIQSPQHLIKIL 125
             D P F  S  PG  +  YGVSKVLDSTHP+Y+K +L+WG  + WEEY+LIQ+P +L KI 
Sbjct:    62 DIPQF-DSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQ 120

Query:   126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
             D +VPLSYY GILGMPG+TAY G +E+CSPKKGE V+V+AA+G+VGQLVGQFAK+ GCYV
Sbjct:   121 DKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYV 180

Query:   186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL 245
             VGSAGSKEKV+LLKNKFGFDDAFNYK+E D D ALKR FPEGIDIYF+NVGGKML+AV+ 
Sbjct:   181 VGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVIN 240

Query:   246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPA 305
             NMR+HGRIAVCGM+SQY+L++PEGVHNL++++ K+IRM+GF+  D+YH YPKFLE+V+P 
Sbjct:   241 NMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPR 300

Query:   306 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
             IKEGK+ YVEDI+EGLE APSAL+G++ G+NVG Q+V V+ E
Sbjct:   301 IKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
 Identities = 233/344 (67%), Positives = 283/344 (82%)

Query:     8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD 67
             +N QVIL NYV+GFPKESD+ I   +++L+VP GS   VL+KNLYLSCDP+ R RM K D
Sbjct:    11 TNNQVILRNYVSGFPKESDLYIAATTVDLRVPPGSM-AVLVKNLYLSCDPFSRIRMEKPD 69

Query:    68 --KPSFVA-SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQ-SPQHLIK 123
                P+ VA +++ G+P+SG+GV+K +DS HPNYK  DL+WG   WEEYS+I  +P    K
Sbjct:    70 PSSPASVARAYSIGKPISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129

Query:   124 ILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC 183
             I  T+VPLS+YTG+LG+PGLTAY G YE+CSPKKGE V+VSAASGAVGQLVGQFAK+ GC
Sbjct:   130 IHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGC 189

Query:   184 YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAV 243
             YVVGSA SKEKV+LLK KFG+D+AFNYK+E DL AALKRCFPEGIDIYFENVGGKMLDAV
Sbjct:   190 YVVGSASSKEKVDLLKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFENVGGKMLDAV 249

Query:   244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVM 303
             L NMR HGRIA CGMISQYNL++PEGVHNL  +V KRIR++GF A +F+ +Y KFL+ ++
Sbjct:   250 LENMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKFLDFIL 309

Query:   304 PAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
             P ++EGK+ YVEDIA+GLE  PSAL+G+F G+NVGKQLV VA E
Sbjct:   310 PYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
 Identities = 233/345 (67%), Positives = 280/345 (81%)

Query:     8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD 67
             +N QVIL +YV+GFPK+SD+ I T +I+L+VP GS   VL+KNLYLSCDP+ R RM K D
Sbjct:    11 TNNQVILRDYVSGFPKQSDLYIATTTIDLRVPPGSM-AVLVKNLYLSCDPHSRTRMGKPD 69

Query:    68 KPSFVAS----FNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQ-SPQHLI 122
              PS  AS    F  G+P+SG+GV+K +DS HPNYK  DL+WG   WEEYS+I  +P    
Sbjct:    70 -PSSQASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHF 128

Query:   123 KILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG 182
             KI  T+VPLS+YTG+LG+PGLTAY G YE+CSPKKGE V+VSAASGAVGQLVGQFAK+ G
Sbjct:   129 KIHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAG 188

Query:   183 CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDA 242
             CYVVGSA SKEKV+LLK KFG+DDAFNYK+E DL AALKRCFPEGIDIYFENVGGKMLDA
Sbjct:   189 CYVVGSASSKEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLDA 248

Query:   243 VLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
             VL NMR HGRIA CGMISQYNL++PEG+HN   +V KRIR++ F A +F+ +Y KFL+ +
Sbjct:   249 VLQNMRTHGRIAACGMISQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFDRYSKFLDFI 308

Query:   303 MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
             +P ++EGK+ YVEDIA+GLE  PSAL+G+F G+NVGKQLV VA E
Sbjct:   309 LPHVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVEVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
 Identities = 228/342 (66%), Positives = 277/342 (80%)

Query:     8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD 67
             +N QVI  NYV GFPKESD+ I   +++L+VP GS   VL+KNLYLSCDP+ R RM K D
Sbjct:    11 TNNQVIFRNYVNGFPKESDLYIAASTVDLRVPPGSM-AVLVKNLYLSCDPHSRTRMGKPD 69

Query:    68 --KPSFVA-SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQ-SPQHLIK 123
                P+ +A +F  G+P+SG+GV+K +DS HPNYK  DL+WG   WEEYS+I  +P    K
Sbjct:    70 PSSPASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129

Query:   124 ILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC 183
             I  T+VPLS+YTG+LG+PGLTAY G YE+CSPKKGE V+VSAASGAVGQLVGQFAK+ GC
Sbjct:   130 IHHTDVPLSFYTGLLGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGC 189

Query:   184 YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAV 243
             YVVGSA S+EKV+LLK KFG+DDAFNYK+E DL AALKRCFPEGIDIYFENVGGKML+AV
Sbjct:   190 YVVGSASSEEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLEAV 249

Query:   244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVM 303
             L NMR HGRIA CGMISQYNL+KPE +HN   +V KRIR++GF A +F+ +Y KFL+ ++
Sbjct:   250 LENMRTHGRIAACGMISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKFLDFIL 309

Query:   304 PAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA 345
             P ++EGKL YVEDI++GLE  PSAL+G+F G+NVGKQLV VA
Sbjct:   310 PHVREGKLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEVA 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q28719	PTGR1_RABIT	1, ., 3, ., 1, ., 7, 4	0.4041	0.9135	0.9083	yes	no
Q3SZJ4	PTGR1_BOVIN	1, ., 3, ., 1, ., 7, 4	0.4035	0.9221	0.9726	yes	no
Q6WAU0	PULR_MENPI	1, ., 3, ., 1, ., 8, 1	0.6578	0.9798	0.9941	N/A	no
Q9C0Y6	YKM8_SCHPO	1, ., -, ., -, ., -	0.4289	0.9510	0.9455	yes	no
Q9EQZ5	PTGR1_CAVPO	1, ., 3, ., 1, ., 7, 4	0.3988	0.9164	0.9665	yes	no
O34812	YFMJ_BACSU	1, ., -, ., -, ., -	0.4285	0.9510	0.9734	yes	no
P97584	PTGR1_RAT	1, ., 3, ., 1, ., 7, 4	0.4117	0.9279	0.9787	yes	no
Q14914	PTGR1_HUMAN	1, ., 3, ., 1, ., 7, 4	0.3982	0.9164	0.9665	yes	no
Q39173	P2_ARATH	1, ., 3, ., 1, ., 7, 4	0.7142	0.9798	0.9912	yes	no
Q29073	PTGR1_PIG	1, ., 3, ., 1, ., 7, 4	0.3941	0.9279	0.9787	yes	no
Q91YR9	PTGR1_MOUSE	1, ., 3, ., 1, ., 7, 4	0.4193	0.9250	0.9756	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.976
3rd Layer	1.3.1.74	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	347
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	0.0
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-176
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-158
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-127
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	1e-110
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	2e-75
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	6e-71
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-43
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-25
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	9e-24
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-21
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	6e-20
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-19
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	9e-19
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-18
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	3e-18
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	6e-16
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	8e-16
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-15
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	6e-15
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	5e-14
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	7e-14
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	2e-13
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	9e-13
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-11
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	4e-11
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	5e-11
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-10
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	5e-10
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-09
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	1e-09
smart00829	287	smart00829, PKS_ER, Enoylreductase	3e-09
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	5e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	4e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	5e-08
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	7e-08
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-07
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-07
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	4e-07
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	7e-07
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	3e-06
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	5e-06
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	5e-06
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	5e-06
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	1e-05
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-05
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-05
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	3e-05
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	3e-05
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	7e-05
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-04
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	6e-04
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	7e-04
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	0.002
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	0.002
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	0.002

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  586 bits (1513), Expect = 0.0
 Identities = 238/338 (70%), Positives = 275/338 (81%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           V NKQVIL  YVTGFPKESD+++ T  + LKVP G    VL+KNLYLSCDPYMRGRM   
Sbjct: 1   VRNKQVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGH 60

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILD 126
           D   ++  F PGE ++GYGV+KV+DS +P++K  DLVWG T WEEYSLI   Q L KI  
Sbjct: 61  DDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDH 120

Query: 127 TNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVV 186
           T+VPLSYY G+LGMPGLTAY G YE+C PKKGE V+VSAASGAVGQLVGQ AKL GCYVV
Sbjct: 121 TDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVV 180

Query: 187 GSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLN 246
           GSAGS EKV+LLKNK GFDDAFNYK+EPDLDAALKR FP GIDIYF+NVGGKMLDAVLLN
Sbjct: 181 GSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLN 240

Query: 247 MRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAI 306
           M +HGRIA CGMISQYNLE PEGV NL+ ++ KR++++GFL GD+ H+YP+FLE +   I
Sbjct: 241 MNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYI 300

Query: 307 KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           KEGKL YVEDIA+GLE AP A VG+FTG N+GKQ+V V
Sbjct: 301 KEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  493 bits (1270), Expect = e-176
 Identities = 223/350 (63%), Positives = 274/350 (78%), Gaps = 5/350 (1%)

Query: 1   MAGEEAVSNKQVILSNYVTGFPKESDMKIITG-SINLKVPEGSKDTVLLKNLYLSCDPYM 59
           M   + V NKQVIL NY+ G PKE+DM++  G  I LK P+GS    L+KNLYLSCDPYM
Sbjct: 1   MMEGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGS-GAFLVKNLYLSCDPYM 59

Query: 60  RGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQ 119
           RGRM      S++  F PG+ + G+GVSKV+DS  PN+K  DL+ G+T WEEYSLI+S  
Sbjct: 60  RGRMRDFHD-SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSD 118

Query: 120 -HLIKI-LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQF 177
             L KI L  ++PLSY+ G+LGM G TAY G YE+CSPKKG+ V+VSAASGAVGQLVGQ 
Sbjct: 119 NQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQL 178

Query: 178 AKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG 237
           AKL GCYVVGSAGS +KV+LLKNK GFD+AFNYK+EPDLDAALKR FPEGIDIYF+NVGG
Sbjct: 179 AKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGG 238

Query: 238 KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK 297
            MLDA LLNM+IHGRIAVCGM+S  +L   +G+HNL  ++ KRIRM+GFL  D+ H +P+
Sbjct: 239 DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQ 298

Query: 298 FLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           FLE V    K+GK+VY+ED++EGLE AP+ALVG+F+G+NVGKQ++ VA E
Sbjct: 299 FLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  446 bits (1149), Expect = e-158
 Identities = 162/336 (48%), Positives = 214/336 (63%), Gaps = 8/336 (2%)

Query: 8   SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD 67
           SN+QV+L+    G P   D +++       +PE     VL++ LYLS DPYMRG MS  D
Sbjct: 1   SNRQVVLAKRPEGPPPPDDFELVEV----PLPELKDGEVLVRTLYLSVDPYMRGWMS--D 54

Query: 68  KPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKI-LD 126
             S+      GEP+ G GV +V++S  P++K  DLV G   W+EY+++     L K+   
Sbjct: 55  AKSYSPPVQLGEPMRGGGVGEVVESRSPDFKVGDLVSGFLGWQEYAVVDGASGLRKLDPS 114

Query: 127 TNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVV 186
             +PLS Y G+LGM GLTAY GL E+  PK GE V VSAA+GAVG +VGQ AKL+G  VV
Sbjct: 115 LGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVV 174

Query: 187 GSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLN 246
           G AGS EK   L  + GFD A NYK  PDL  ALK   P+GID+YF+NVGG++LDA L  
Sbjct: 175 GIAGSDEKCRWLVEELGFDAAINYKT-PDLAEALKEAAPDGIDVYFDNVGGEILDAALTL 233

Query: 247 MRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAI 306
           +   GRIA+CG ISQYN  +P G  NL  ++ KR+ M+GF+  D+  ++P+ L  +   +
Sbjct: 234 LNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWL 293

Query: 307 KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
            EGKL Y ED+ EGLE AP A +G+FTG+N GK +V
Sbjct: 294 AEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  367 bits (945), Expect = e-127
 Identities = 158/340 (46%), Positives = 214/340 (62%), Gaps = 10/340 (2%)

Query: 8   SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD 67
            N++++L++   G P   D ++      + VPE  +  VLL+ LYLS DPYMRGRMS  D
Sbjct: 8   VNRRIVLASRPEGAPVPDDFRLEE----VDVPEPGEGQVLLRTLYLSLDPYMRGRMS--D 61

Query: 68  KPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDT 127
            PS+      GE + G  V+KV+ S HP ++  D+V G++ W+EY++    + L K+  +
Sbjct: 62  APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAIS-DGEGLRKLDPS 120

Query: 128 NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVG 187
             PLS Y G+LGMPGLTAY GL ++  PK GE V VSAA+GAVG +VGQ AKL GC VVG
Sbjct: 121 PAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVG 180

Query: 188 SAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNM 247
            AG  EK + L  + GFD   +YK E D   ALK   P+GID+YFENVGG++LDAVL  +
Sbjct: 181 IAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLL 239

Query: 248 RIHGRIAVCGMISQYN-LEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP-KFLELVMPA 305
            +  RI VCG ISQYN  E P G   L  ++ KR+R++GF+    Y Q   + L  +   
Sbjct: 240 NLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGW 299

Query: 306 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA 345
           +KEGK+ Y E I +GLE AP A +G+ +G+N GK +V VA
Sbjct: 300 VKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVA 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  323 bits (830), Expect = e-110
 Identities = 140/345 (40%), Positives = 198/345 (57%), Gaps = 23/345 (6%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSI-NLKVPEGSKDTVLLKNLYLSCDPYMRGRMSK 65
           V  K  +L  +  G PKESD +++   +  LK  E     VL + L+LS DPYMR    +
Sbjct: 1   VKAKTWVLKKHFDGKPKESDFELVEEELPPLKDGE-----VLCEALFLSVDPYMRPYSKR 55

Query: 66  LDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQH----- 120
           L         N G+ + G  V+KV++S +  +    +V     W  +++           
Sbjct: 56  L---------NEGDTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYK 106

Query: 121 LIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKL 180
           L   L  ++P S   G+LGMPGLTAY GL E+C PK GE V V+ A+GAVG LVGQ AK+
Sbjct: 107 LPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKI 166

Query: 181 VGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKML 240
            GC V+G AGS +KV  LK + GFD  FNYK    L+ ALK   P+GID YF+NVGG+  
Sbjct: 167 KGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFS 224

Query: 241 DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL-MQVVGKRIRMEGFLAGDFYHQYPKFL 299
             VL +M   GR+AVCG IS YN ++P+    +   ++ K+++MEGF+   +  ++P+ L
Sbjct: 225 STVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEAL 284

Query: 300 ELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           + ++  IKEGKL Y E + EG E  P A +G+  G+N GK +V V
Sbjct: 285 KQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score =  234 bits (599), Expect = 2e-75
 Identities = 140/340 (41%), Positives = 199/340 (58%), Gaps = 24/340 (7%)

Query: 10  KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP 69
           K   L  +  G+P +SD ++ T    +++P  +   VLL+ L+LS DPYMR    +L + 
Sbjct: 2   KTWTLKKHFVGYPTDSDFELKT----VELPPLNNGEVLLEALFLSVDPYMRVAAKRLKE- 56

Query: 70  SFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKIL---- 125
                   G+ + G  V++V++S +    K  +V     W  +S I   + L K+L    
Sbjct: 57  --------GDTMMGQQVARVVESKNVALPKGTIVLASPGWTSHS-ISDGKDLEKLLTEWP 107

Query: 126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
           DT +PLS   G +GMPGLTAY GL E+C  K GE V V+AA+GAVG +VGQ AKL GC V
Sbjct: 108 DT-LPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 166

Query: 186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL 245
           VG+AGS EKV  LK K GFD AFNYK    L+  LK+  P+G D YF+NVGG+  + V+ 
Sbjct: 167 VGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIG 225

Query: 246 NMRIHGRIAVCGMISQYNL--EKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY-PKFLELV 302
            M+  GRIA+CG IS YN     P G    + V+ + +RMEGF+   +  +   K L+ +
Sbjct: 226 QMKKFGRIAICGAISTYNRTGPLPPGPPPEI-VIYQELRMEGFIVNRWQGEVRQKALKEL 284

Query: 303 MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
           +  + EGK+ Y E + EG E  P+A +G+  G+N+GK +V
Sbjct: 285 LKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIV 324

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score =  224 bits (572), Expect = 6e-71
 Identities = 119/319 (37%), Positives = 177/319 (55%), Gaps = 18/319 (5%)

Query: 39  PEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYK 98
            E ++  VL++ LYLS DPYMR RM++     ++A +   + L G GV  V +S H  + 
Sbjct: 32  DELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFA 91

Query: 99  KDDLVWGLT-SWEEYSLIQSPQHLIKILDTNV--PLSYYTGILGMPGLTAYGGLYE--LC 153
             D+V      W+ Y+++     L K+    V   LSY+ G +G+PGLTA  G+ E    
Sbjct: 92  VGDIVTSFNWPWQTYAVL-DGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI 150

Query: 154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK 212
           +P   + + VS A+GA G L GQ  +L+GC  VVG  GS EK  LLK++ GFD A NYK 
Sbjct: 151 TPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT 210

Query: 213 EPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKP----- 267
           + ++   L+   PEG+D+YF+NVGG++ D V+  M  +  I +CG ISQYN + P     
Sbjct: 211 D-NVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPL 269

Query: 268 -EGVHNLMQVVGKR-IRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAP 325
            E       ++ +R I  E FL  ++  ++ + +  +   +KEGKL   E + EGLE A 
Sbjct: 270 PEATE---AILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAG 326

Query: 326 SALVGIFTGQNVGKQLVVV 344
            A   +  G N+GKQ+V V
Sbjct: 327 EAFQSMMNGGNIGKQIVKV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  152 bits (386), Expect = 2e-43
 Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 10/209 (4%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           GLTA   L E+   K GE V V+AA+G  GQ   Q AKL GC+V+G+  S EK   LK+ 
Sbjct: 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS- 182

Query: 202 FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQ 261
            G D   NYK E DL   LK+ +P+G+D+ +E+VGG+M D  + N+ + GR+ V G IS 
Sbjct: 183 LGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISG 241

Query: 262 YNLEK---PEGVHNL-MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDI 317
           Y       P     L  +++ K   + GF    +    P+ L+ ++   + GKLV   D 
Sbjct: 242 YQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDP 301

Query: 318 AE--GLEKAPSALVGIFTGQNVGKQLVVV 344
               GLE    A+  +++G+N+GK  VVV
Sbjct: 302 TRFRGLESVADAVDYLYSGKNIGK--VVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  103 bits (258), Expect = 4e-25
 Identities = 89/341 (26%), Positives = 140/341 (41%), Gaps = 32/341 (9%)

Query: 18  VTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDP---YMR-GRMSKLDKPSFVA 73
           V  F     +K++     +  PE     VL++      +P    +R G    +    F+ 
Sbjct: 6   VEEFGGPEVLKVVE----VPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFI- 60

Query: 74  SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLT------SWEEYSLIQSPQHLIKILDT 127
              PG   +G  V  V       +K  D V  L        + EY ++  P   +  L  
Sbjct: 61  ---PGSEAAGV-VVAVGSGV-TGFKVGDRVAALGGVGRDGGYAEYVVV--PADWLVPLPD 113

Query: 128 NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVG 187
            +        L + GLTA+  L++    K GE V V  A+G VG    Q AK +G  VV 
Sbjct: 114 GLSFEE-AAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVA 172

Query: 188 SAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNM 247
              S EK+ LLK + G D   NY++E  ++   +    +G+D+  + VGG    A L  +
Sbjct: 173 VVSSSEKLELLK-ELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAAL 231

Query: 248 RIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ-YPKFLELVMPAI 306
              GR+   G +S      P    NL+ ++GKR+ + G   G    +   + L  +   +
Sbjct: 232 APGGRLVSIGALS----GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLL 287

Query: 307 KEGKLVYVEDIAEGLEKAPSALVGIF-TGQNVGKQLVVVAP 346
             GKL  V D    L +AP+A   +    +  GK  VV+  
Sbjct: 288 ASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGK--VVLKV 326

Length = 326

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 98.2 bits (245), Expect = 9e-24
 Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 10/166 (6%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L  P  TAY  L      K G+ V V  A G VG L  Q AK  G  V+ +  S EK+ L
Sbjct: 115 LPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL 173

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM-LDAVLLNMRIHGRIAVC 256
            K + G D   +YK+E DL+  L+     G D+  + VGG   L   L  +R  GRI V 
Sbjct: 174 AK-ELGADHVIDYKEE-DLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV 231

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
           G  S            L +++ K + + G   G     + + L+L+
Sbjct: 232 GGTSGGPPLDD-----LRRLLFKELTIIGSTGGT-REDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 93.4 bits (233), Expect = 1e-21
 Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 12/210 (5%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           LG+P LTAY  L+     K GE V V   SGAVG    Q A+  G  V+ +A S E   L
Sbjct: 125 LGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL 184

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
           ++   G D  FNY+ E   D  L     +G+D+  E +    L   L  +   GRI V  
Sbjct: 185 VRQA-GADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVV-- 241

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF---LELVMPAIKEGKLVYV 314
               Y      G   +  ++ K   + G L   +     +     E +   + +G L  V
Sbjct: 242 ----YGSGGLRGTIPINPLMAKEASIRGVLL--YTATPEERAAAAEAIAAGLADGALRPV 295

Query: 315 EDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
                 LE+A +A   + +G  +GK ++  
Sbjct: 296 IAREYPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 88.4 bits (220), Expect = 6e-20
 Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 26/209 (12%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L + GLTA+  L+EL   K G+ V +  A+G VG    Q AK  G  V+ +A S    + 
Sbjct: 125 LPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAANADF 183

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIA-VC 256
           L+   G D+  +Y K     AA     P G+D   + VGG+ L   L  ++  GR+  + 
Sbjct: 184 LR-SLGADEVIDYTKGDFERAAA----PGGVDAVLDTVGGETLARSLALVKPGGRLVSIA 238

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL-VYVE 315
           G        K  GV      V                   + L  +   ++ GKL   V+
Sbjct: 239 GPPPAEQAAKRRGVRAGFVFV---------------EPDGEQLAELAELVEAGKLRPVVD 283

Query: 316 DIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
            +   LE A  A   + +G   GK  VV+
Sbjct: 284 RVFP-LEDAAEAHERLESGHARGK--VVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 82.7 bits (205), Expect = 2e-19
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)

Query: 169 AVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP-E 226
            VG    Q AK +G   V+    S+EK+ L K + G D   NY+ E D    ++      
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDE-DFVERVRELTGGR 58

Query: 227 GIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEG 285
           G+D+  + VG    L+  L  +R  GR+ V G+     +  P     L  ++ K + + G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFP-----LRDLLLKELTILG 113

Query: 286 FLAGDFYHQYPKFLELV 302
            L G    ++ + LEL+
Sbjct: 114 SLGGG-REEFEEALELL 129

Length = 131

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 85.2 bits (212), Expect = 9e-19
 Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 27/210 (12%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
            TA+  L++L   K GE V +   +  VG    Q AK +G  V+ +AGS+EK+   +   
Sbjct: 125 FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-AL 183

Query: 203 GFDDAFNYKKEPDLDAALKRCF-PEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQ 261
           G D A NY+ E D    +K      G+D+  + VGG  L   L  +   GR+ + G++  
Sbjct: 184 GADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGG 242

Query: 262 YNLEKPEGVHNLMQVVGKRIRMEGF------------LAGDFYHQYPKFLELVMPAIKEG 309
              E      +L  ++ KR+ + G             LA  F          V P    G
Sbjct: 243 AKAEL-----DLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREH-------VWPLFASG 290

Query: 310 KLVYVEDIAEGLEKAPSALVGIFTGQNVGK 339
           ++  V D    LE+A  A   + + +++GK
Sbjct: 291 RIRPVIDKVFPLEEAAEAHRRMESNEHIGK 320

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 84.1 bits (209), Expect = 2e-18
 Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 14/207 (6%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
            TAY  L      + GE V V  A+G VG    Q AK +G  V+ +A S+EK+ L +   
Sbjct: 125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-AL 183

Query: 203 GFDDAFNYKKEPDLDAALK-RCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQ 261
           G D   +Y ++PDL   +K      G+D+ ++ VGG + +A L ++   GR+ V G  S 
Sbjct: 184 GADHVIDY-RDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASG 242

Query: 262 YNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK----FLELVMPAIKEGKLVYVEDI 317
              E P+   NL+ +  K I + G   G +  + P+     L  +   + EGK+      
Sbjct: 243 ---EIPQIPANLLLL--KNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSA 297

Query: 318 AEGLEKAPSALVGIFTGQNVGKQLVVV 344
              LE+A  AL  +   +  GK  VV+
Sbjct: 298 VFPLEQAAEALRALADRKATGK--VVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 22/236 (9%)

Query: 111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAV 170
             +L+  P +L        PL++         LTA+  L      + GE V V  A   V
Sbjct: 129 ARNLLPIPDNLSFEEAAAAPLTF---------LTAWHMLVTRARLRPGETVLVHGAGSGV 179

Query: 171 GQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDI 230
           G    Q AKL G  V+ +AGS++K+   K   G D   +Y+KE  +    +     G+D+
Sbjct: 180 GSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDFVREVRELTGKRGVDV 238

Query: 231 YFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD 290
             E+VG    +  L ++   GR+  CG  + Y     E   +L  V  +++ + G   G 
Sbjct: 239 VVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT 293

Query: 291 FYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP 346
                   L+  +  +  GKL  V D    LE+A  A   + + +  GK  +V+ P
Sbjct: 294 KAE-----LDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGK--IVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 77.3 bits (191), Expect = 6e-16
 Identities = 86/322 (26%), Positives = 131/322 (40%), Gaps = 38/322 (11%)

Query: 38  VPEGSKDTVLLKNLYLSCDPY----MRGRM-SKLDKPSFVASFNPGEPLSGYGVSKVLDS 92
           +P      VL+K    S +P      RG     L +P       PG   +G  V+  + S
Sbjct: 21  IPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPI---PGMDFAGEVVA--VGS 75

Query: 93  THPNYKKDDLVWGLT------SWEEYSLIQSPQHLIKILDTNVPLSYYTG-ILGMPGLTA 145
               +K  D V+G        +  EY +      L K  +    +S+     L + GLTA
Sbjct: 76  GVTRFKVGDEVFGRLPPKGGGALAEYVVA-PESGLAKKPEG---VSFEEAAALPVAGLTA 131

Query: 146 YGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD 205
              L +    K G+ V ++ ASG VG    Q AK +G +V G   ++    L+++  G D
Sbjct: 132 LQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTR-NAELVRS-LGAD 189

Query: 206 DAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAV--LLNMRIHGR-IAVCGMISQY 262
           +  +Y  E   D        E  D+ F+ VG          L ++  GR ++V G  S  
Sbjct: 190 EVIDYTTE---DFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL 246

Query: 263 NLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLE 322
            L        L    G+R++   FLA        + LE +   ++EGKL  V D    LE
Sbjct: 247 LLVLLLLPLTLG-GGGRRLKF--FLAKP----NAEDLEQLAELVEEGKLKPVIDSVYPLE 299

Query: 323 KAPSALVGIFTGQNVGKQLVVV 344
            AP A   + +G+  GK  VV+
Sbjct: 300 DAPEAYRRLKSGRARGK--VVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 76.8 bits (190), Expect = 8e-16
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           G+TA+ GL +  + + G+ V +   +G VG +  Q AK  G  V  +A S EK    +  
Sbjct: 129 GITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-S 186

Query: 202 FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQ 261
            G D    Y++    +   +     G D+ F+ VGG+ LDA    + ++GR+      + 
Sbjct: 187 LGADPIIYYRETVV-EYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT 245

Query: 262 YNL 264
           ++L
Sbjct: 246 HDL 248

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.3 bits (186), Expect = 3e-15
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 18/218 (8%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN 200
            LTAY  L+EL + + G+ V V +A+G VG   GQ  K V    VVG+A S  K   LK 
Sbjct: 123 YLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALKE 181

Query: 201 KFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
             G     +Y+ + D    +K+  PEG+DI  + +GG+        ++  GR+ V G  +
Sbjct: 182 N-GVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAAN 239

Query: 261 QYNLEKPEGVH-----------NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP---AI 306
               EK                + M+++ +   + GF  G  + +     E++       
Sbjct: 240 LVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLY 299

Query: 307 KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           +EGK+    D     E+   A+  + + +N+GK ++  
Sbjct: 300 EEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.1 bits (183), Expect = 6e-15
 Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 8/149 (5%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           GLTA+  L+ L   K G+ V V    G V     QFAK  G  V+ ++ S EK+   K  
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKLERAK-A 202

Query: 202 FGFDDAFNYKKEPDLDAALKRCFP-EGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
            G D   NY+  PD    + +     G+D   E  G   L   +  +   G I++ G +S
Sbjct: 203 LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLS 262

Query: 261 QYNLEKPEGVHNLMQVVGKRIRMEGFLAG 289
                  E    L+ ++ K   + G   G
Sbjct: 263 -----GFEAPVLLLPLLTKGATLRGIAVG 286

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.5 bits (176), Expect = 5e-14
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 9/173 (5%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L M  LTAYG L EL   + G+ V ++AAS +VG    Q A   G  V+ +  + EK + 
Sbjct: 125 LWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKR-CFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVC 256
           L    G         E DL A + R    +G+D+ F+ VGG     +   +   G + V 
Sbjct: 185 LLAL-GAAHVIVT-DEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVY 242

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEG 309
           G +S     +P     L   + K +   G+   +     P+     +  I +G
Sbjct: 243 GALS----GEPTPF-PLKAALKKSLTFRGYSLDEITLD-PEARRRAIAFILDG 289

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 70.9 bits (175), Expect = 7e-14
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 6/151 (3%)

Query: 111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAV 170
           EY ++     L+K+ D  +       +L + GLTA+  L E    K G+ V V AA+G V
Sbjct: 93  EYRVV-PASRLVKLPD-GISDETAAALL-LQGLTAHYLLRETYPVKPGDTVLVHAAAGGV 149

Query: 171 GQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKR-CFPEGID 229
           G L+ Q+AK +G  V+G+  S+EK  L +   G D   NY+ E D    ++      G+D
Sbjct: 150 GLLLTQWAKALGATVIGTVSSEEKAELARAA-GADHVINYRDE-DFVERVREITGGRGVD 207

Query: 230 IYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
           + ++ VG    +  L ++R  G +   G  S
Sbjct: 208 VVYDGVGKDTFEGSLDSLRPRGTLVSFGNAS 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 2e-13
 Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
           LTA+  L +    KKG+ V + A +  VG    Q A+  G   + +  S+EKV+  K   
Sbjct: 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-L 184

Query: 203 GFDDAFNYKKEPDLDAALKRCF-PEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQ 261
                  Y  E      +K+    +G+++  + VGG  L      + + G+  V G +  
Sbjct: 185 AAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGG 244

Query: 262 YNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK-----FLELVMPAIKEGKLVYVED 316
             +EK     NL+ ++ KR  +          +Y       F   V+P ++EG++  + D
Sbjct: 245 AKVEKF----NLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVD 300

Query: 317 IAEGLEKAPSALVGIFTGQNVGKQLVVV 344
               LE+   A   +   +N+GK ++ V
Sbjct: 301 RTYPLEEVAEAHTFLEQNKNIGKVVLTV 328

Length = 334

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 67.7 bits (166), Expect = 9e-13
 Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 25/214 (11%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
            T +  L++    K GE V +   +  +G    Q AK  G  V  +AGS EK        
Sbjct: 125 FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACEAL 183

Query: 203 GFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQY 262
           G D A NY++E  ++        +G+D+  + VGG  L+  +  + + GRI   G     
Sbjct: 184 GADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGF---- 239

Query: 263 NLEKPEGVHNLMQVVGKRIRMEGF------------LAGDFYHQYPKFLELVMPAIKEGK 310
                +   +L  ++ KR+ + G             +A +         E V P +  G+
Sbjct: 240 -QGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAE-------LREHVWPLLASGR 291

Query: 311 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           +  V D    LE A  A   + +G ++GK ++ V
Sbjct: 292 VRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 63.5 bits (155), Expect = 3e-11
 Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 19/200 (9%)

Query: 144 TAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG 203
           TA   L +    KKG+ V V+ A G VG    Q AK +G  V+    S EK+ +LK    
Sbjct: 150 TAVHAL-KRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGA 208

Query: 204 FDDAFNYKK-EPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQY 262
            D   +  K   D+          G D+  E VG   ++  L ++   GR+ + G     
Sbjct: 209 -DYVIDGSKFSEDVKKLG------GADVVIELVGSPTIEESLRSLNKGGRLVLIG----- 256

Query: 263 NLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLE 322
           N+           ++ K IR+ G ++          +E  +  +KEGK+  V D    LE
Sbjct: 257 NVTPDPAPLRPGLLILKEIRIIGSISAT-----KADVEEALKLVKEGKIKPVIDRVVSLE 311

Query: 323 KAPSALVGIFTGQNVGKQLV 342
               AL  + +G+ VG+ ++
Sbjct: 312 DINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 62.9 bits (154), Expect = 4e-11
 Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)

Query: 137 ILGMPGLTAYGGLYEL----CSPKKGEYVYVSAASGAVGQL-VGQFAKLVGCYVVGSAGS 191
           ILG  G TA   ++ L     +P+ G  V V+ A+G VG + V   AKL G  VV   G 
Sbjct: 123 ILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVAILAKL-GYTVVALTGK 180

Query: 192 KEKVNLLKNKFGFDDAFNYKK-EPDLDAAL-KRCFPEGIDIYFENVGGKMLDAVLLNMRI 249
           +E+ + LK   G  +  + +    +    L K  +   ID     VGG +L  +L   + 
Sbjct: 181 EEQADYLK-SLGASEVLDREDLLDESKKPLLKARWAGAID----TVGGDVLANLLKQTKY 235

Query: 250 HGRIAVCGMISQYNLE 265
            G +A CG  +   L 
Sbjct: 236 GGVVASCGNAAGPELT 251

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 62.7 bits (153), Expect = 5e-11
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 2/115 (1%)

Query: 141 PGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN 200
            GLTAY  L++    + G  + ++  +G VG    Q AK  G  V+ +  SK     +K 
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182

Query: 201 KFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAV 255
             G D   +Y  E   +   +     G+D   + VGG+   A+   +  +G +  
Sbjct: 183 SLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVC 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 61.0 bits (149), Expect = 1e-10
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 10/115 (8%)

Query: 129 VPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS 188
           +P++Y         LTAY  L +L   +KGE V + AA+G VGQ   Q A+ +G  V  +
Sbjct: 89  LPVAY---------LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFAT 139

Query: 189 AGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF-PEGIDIYFENVGGKMLDA 242
            GS+EK   L+   G  D     ++      + R     G+D+   ++ G++L A
Sbjct: 140 VGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRA 194

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 59.3 bits (144), Expect = 5e-10
 Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           +   G TA G L +L +   G+ V V+AA+G +G L+ Q AK  G  VVG+AG   K  L
Sbjct: 124 VVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL 182

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCF-PEGIDIYFENVGGKMLDAVLLNMRIHGRIAVC 256
           ++   G D A +Y   PD    ++      G+ +  + VGG +  A L  +   GR    
Sbjct: 183 VR-ALGADVAVDY-TRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTY 240

Query: 257 GMIS 260
           G  S
Sbjct: 241 GWAS 244

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 58.8 bits (143), Expect = 1e-09
 Identities = 66/282 (23%), Positives = 109/282 (38%), Gaps = 33/282 (11%)

Query: 85  GVSKVLDSTHP--NYKKDDLVW----GLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL 138
           GV +V+       + K  D V     GL +W  ++++     LIK+ +   P       L
Sbjct: 71  GVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVV-PADDLIKVPNDVDPEQA--ATL 127

Query: 139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLL 198
            +   TAY  L +    + G++V  + A+ AVGQ V Q AKL+G   +     +  +  L
Sbjct: 128 SVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEEL 187

Query: 199 KN---KFGFDDAFNYKKEPDLDAA--LKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRI 253
           K      G D     ++   L A   LK        +    VGGK    +   +   G +
Sbjct: 188 KERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTM 247

Query: 254 AVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY-----HQYPKFLELVMPAIKE 308
              G +S   +  P        ++ K I + GF    +       +    LE +   I+E
Sbjct: 248 VTYGGMSGQPVTVPTS-----LLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIRE 302

Query: 309 GKLVYV------EDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           GKL         +D  E  + A +  +    G   GKQ++V+
Sbjct: 303 GKLKAPPVEKVTDDPLEEFKDALANALKGGGG---GKQVLVM 341

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 46/204 (22%), Positives = 77/204 (37%), Gaps = 11/204 (5%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
           LTA+  L E      G++V  +AA+ AVG+++ Q AKL+G   +      E+V  LK   
Sbjct: 124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKAL- 182

Query: 203 GFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQY 262
           G D+  +   E       +     G  +  + VGG+    +  ++R  G +   G++S  
Sbjct: 183 GADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLS-- 240

Query: 263 NLEKPEGVHNLMQVVGKRIRMEGFLAGDFYH-----QYPKFLELVMPAIKEGKLVYVEDI 317
                         + K I + GF    + H        +    V+  ++ G L      
Sbjct: 241 ---GEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGA 297

Query: 318 AEGLEKAPSALVGIFTGQNVGKQL 341
              LE    A+         GK L
Sbjct: 298 KFPLEDFEEAVAAAEQPGRGGKVL 321

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 56.6 bits (138), Expect = 3e-09
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
           LTAY  L +L   + GE V + AA+G VGQ   Q A+ +G  V  +AGS EK + L+   
Sbjct: 89  LTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRA-L 147

Query: 203 GFDDA 207
           G  D 
Sbjct: 148 GIPDD 152

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 56.4 bits (137), Expect = 5e-09
 Identities = 61/229 (26%), Positives = 90/229 (39%), Gaps = 48/229 (20%)

Query: 137 ILGMPGLTAYGGLYEL----CSPKKGEYVYVSAASGAVGQL-VGQFAKLVGCYVVGSAGS 191
            LG  G TA   +  L     +P+ G  V V+ A+G VG L V   +KL G  VV S G 
Sbjct: 122 ALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAILSKL-GYEVVASTGK 179

Query: 192 KEKVNLLKNKFG-----FDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLN 246
            E+ + LK + G       +  +   +P      K  +   +D     VGG  L  VL  
Sbjct: 180 AEEEDYLK-ELGASEVIDREDLSPPGKP----LEKERWAGAVD----TVGGHTLANVLAQ 230

Query: 247 MRIHGRIAVCGMISQYNLE-----------KPEGVHNLMQVVGKRIRMEGFLAGDFYHQY 295
           ++  G +A CG+    +L               G+ ++   +  R      LA D     
Sbjct: 231 LKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDL---K 287

Query: 296 PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           P+ LE +   I              LE+ P AL  I  GQ+ G+ +V V
Sbjct: 288 PRNLESITREI-------------TLEELPEALEQILAGQHRGRTVVDV 323

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 4/118 (3%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
            TA+G L+     + G+ + +   + +VG    + AK +G  V  +  S E+  LLK + 
Sbjct: 128 YTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-EL 186

Query: 203 GFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
           G D+      +  +   L+   P G D   E VG   L   L ++R  G + + G++ 
Sbjct: 187 GADEVV--IDDGAIAEQLRA-APGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLG 241

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.5 bits (129), Expect = 5e-08
 Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
             TA   L E      GE V V+ ASG VG  + Q AK  G  V+  AG   K   ++  
Sbjct: 163 YSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVR-A 219

Query: 202 FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI 259
            G  D    +  P L  A K    E +D+  + VGG +   +L  +R  GR    G I
Sbjct: 220 LG-ADTVILRDAPLLADA-KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAI 275

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 53.3 bits (129), Expect = 7e-08
 Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 50/206 (24%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           G+T Y  L +    K G++V +S A G +G L  Q+AK +G  V+      EK+ L K +
Sbjct: 151 GVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-E 208

Query: 202 FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL------------LNM-R 248
            G D   ++KK  D++A  +     G              AV+            L+  R
Sbjct: 209 LGADAFVDFKKSDDVEAVKELTGGGG------------AHAVVVTAVSAAAYEQALDYLR 256

Query: 249 IHGRIAVCGMISQYNLEKPEGVHNL--MQVVGKRIRMEGFLAG---------DFYHQYPK 297
             G +   G+        P G   L    +V + I + G L G         +F  +   
Sbjct: 257 PGGTLVCVGL-------PPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAAR--- 306

Query: 298 FLELVMPAIKEGKLVYVEDIAEGLEK 323
               V P I+   L  + ++ E +E+
Sbjct: 307 --GKVKPHIQVVPLEDLNEVFEKMEE 330

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 12/193 (6%)

Query: 156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD 215
            KGE++ +  A+G  G +  Q A+L G  +  +A S +K+  LK + G     NY  E D
Sbjct: 119 AKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINY-VEED 176

Query: 216 LDAALKRCFP-EGIDIYFENVGGKMLDAVLLNMRIHGR---IAVCGMISQYNLEKPEGVH 271
            +  + R     G+D+    + G+ +   L  +   GR   IA+  + S  +++    + 
Sbjct: 177 FEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDL-SVLS 235

Query: 272 NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGI 331
           N        +R    L  +F   Y      ++  ++EG+L          +    A   +
Sbjct: 236 NNQSFHSVDLRKLLLLDPEFIADY---QAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYL 292

Query: 332 FTGQNVGKQLVVV 344
              +N+GK  VVV
Sbjct: 293 SDRENIGK--VVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 51/223 (22%), Positives = 76/223 (34%), Gaps = 29/223 (13%)

Query: 118 PQHLIKILDTNVPLSYYTGILGM---PGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLV 174
               +  L   +              P  TAY G  E  + + G  V V  A G +G L 
Sbjct: 131 ADFNLAKLPDGIDE-----EAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLA 184

Query: 175 GQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFE 233
              AKL+G   V+    S E++ L K   G D   N  ++      L+     G D+  E
Sbjct: 185 IALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIE 244

Query: 234 NVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY 292
            VG    LD  L  +R  G + V G+         +       VV K + + G       
Sbjct: 245 AVGSPPALDQALEALRPGGTVVVVGV-----YGGEDIPLPAGLVVSKELTLRG---SLRP 296

Query: 293 HQYPKFLELVMPAIKEGKL---------VYVEDIAEGLEKAPS 326
                F E  +  +  GK+         + ++D AE  E    
Sbjct: 297 SGREDF-ERALDLLASGKIDPEKLITHRLPLDDAAEAYELFAD 338

Length = 350

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 7/152 (4%)

Query: 109 WEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASG 168
             EY+++  P   +  L  ++     + +LG  G TAYG L      + GE V V    G
Sbjct: 142 LAEYAVV--PATALAPLPESLDY-TESAVLGCAGFTAYGALKHAADVRPGETVAVIGV-G 197

Query: 169 AVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEG 227
            VG    Q AK  G   + +     EK+   K + G     N  KE  + A  +     G
Sbjct: 198 GVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAAKEDAVAAIREITGGRG 256

Query: 228 IDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM 258
           +D+  E +G  +     L  +R  GR  V G+
Sbjct: 257 VDVVVEALGKPETFKLALDVVRDGGRAVVVGL 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 24/220 (10%)

Query: 111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAV 170
           EY ++   ++++KI    + L      L   G+T Y  L +  + K G++V V  A G +
Sbjct: 124 EYVVV-PARYVVKI-PEGLDL-AEAAPLLCAGITTYRALKKA-NVKPGKWVAVVGA-GGL 178

Query: 171 GQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDI 230
           G +  Q+AK +G  V+    S+EK+ L K K G D   N      L+A       E  D 
Sbjct: 179 GHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDSDALEAV-----KEIADA 232

Query: 231 YFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD 290
             + VG   L+  L  +R  G + + G+        P  +     ++ K I + G L G 
Sbjct: 233 IIDTVGPATLEPSLKALRRGGTLVLVGLP----GGGPIPLLPAFLLILKEISIVGSLVGT 288

Query: 291 FYHQYPKFLELVMPAIKEGKLVYVEDIAE--GLEKAPSAL 328
                 + L+       EGK+    +I E   L++   A 
Sbjct: 289 -RADLEEALDFA----AEGKI--KPEILETIPLDEINEAY 321

Length = 339

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 11/189 (5%)

Query: 108 SWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAAS 167
           ++ EY++  + Q L   L   V           P LTA G + E    +  + V  +AA+
Sbjct: 98  TYAEYAVADAQQCLP--LPDGVSFEQGASSFVNP-LTALG-MLETAREEGAKAVVHTAAA 153

Query: 168 GAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKR-CFPE 226
            A+G+++ +  K  G  V+     KE+V+LLK K G +   N   +PD    LK      
Sbjct: 154 SALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLN-SSDPDFLEDLKELIAKL 211

Query: 227 GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGF 286
              I+F+ VGG +   +LL M     + V G +S    +  E + + + ++ K   +EGF
Sbjct: 212 NATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSG---KLDEPI-DPVDLIFKNKSIEGF 267

Query: 287 LAGDFYHQY 295
               +  + 
Sbjct: 268 WLTTWLQKL 276

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 30/200 (15%)

Query: 75  FNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWE-------EYS-LIQSPQHLIKILD 126
           F PG  L+G     V++S  P +K  D V  +TS++        YS   + P   +  L 
Sbjct: 59  FIPGIDLAG----TVVESNDPRFKPGDEVI-VTSYDLGVSHHGGYSEYARVPAEWVVPLP 113

Query: 127 TNVPLSYYTGILGMPGLTAYGGLYEL----CSPKKGEYVYVSAASGAVGQLVGQFAKLVG 182
             + L     ILG  G TA   ++ L     +P++G  V V+ A+G VG L       +G
Sbjct: 114 KGLTLKE-AMILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAVSILAKLG 171

Query: 183 CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL----KRCFPEGIDIYFENVGGK 238
             VV S G  +  + LK K G  +     +E   + ++    K+ +   +D     VGGK
Sbjct: 172 YEVVASTGKADAADYLK-KLGAKEVIP--REELQEESIKPLEKQRWAGAVD----PVGGK 224

Query: 239 MLDAVLLNMRIHGRIAVCGM 258
            L  +L  ++  G +AV G+
Sbjct: 225 TLAYLLSTLQYGGSVAVSGL 244

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 70/285 (24%), Positives = 113/285 (39%), Gaps = 51/285 (17%)

Query: 72  VASFNPGEPLSGYGVSKVLDST-------HPNYKKDDLVWGLTS---WEEYSLIQSPQH- 120
           V     G+ +  Y   +V D T       +    ++  + G+ S   + EY ++  P+  
Sbjct: 73  VKGVKKGDRVVVYN--RVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVV--PEKN 128

Query: 121 LIKILDTNVPLSYYTGI---LGMPGLTAYGGLYEL-CSPKKGEYVYVSAASGAVGQLVGQ 176
           L KI     P S    +   L +  LTAY  L      P  GE V V  ASG  G    Q
Sbjct: 129 LFKI-----PDSISDELAASLPVAALTAYHALKTAGLGP--GETVVVFGASGNTGIFAVQ 181

Query: 177 FAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG 236
            AK++G  V+  +      + LK +FG D+  +Y +  +    + +      D+   ++G
Sbjct: 182 LAKMMGAEVIAVSRK----DWLK-EFGADEVVDYDEVEEKVKEITKMA----DVVINSLG 232

Query: 237 GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP 296
               D  L  +   GR+   G      L   E   +L  +  K+I + G   G       
Sbjct: 233 SSFWDLSLSVLGRGGRLVTFGT-----LTGGEVKLDLSDLYSKQISIIGSTGG----TRK 283

Query: 297 KFLELV--MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGK 339
           + LELV     +K    V V    + LE+A  AL  +F+ +  G+
Sbjct: 284 ELLELVKIAKDLK----VKVWKTFK-LEEAKEALKELFSKERDGR 323

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 48/180 (26%), Positives = 67/180 (37%), Gaps = 19/180 (10%)

Query: 83  GY-GVSKVLD--STHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILG 139
           GY  V +V++  S    +K  D V+      E  ++  P +L+  L   +P       L 
Sbjct: 25  GYSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVV--PANLLVPLPDGLPPER--AALT 80

Query: 140 MPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLL 198
               TA  G+     P+ GE V V    G VG L  Q AK  G   VVG      +  L 
Sbjct: 81  ALAATALNGV-RDAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELA 138

Query: 199 KNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG-GKMLDAVLLNMRIHGRIAVCG 257
           +   G  D          D    R    G D+  E  G    L+  L  +R  GR+ + G
Sbjct: 139 E-ALGPADP---VAADTADEIGGR----GADVVIEASGSPSALETALRLLRDRGRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 21/128 (16%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L + G+TA   L     P  G  V V+ ASG VG+   Q A L G +VV   GS  +   
Sbjct: 114 LPVAGVTALRALRRG-GPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG 172

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGI-----DIYFENVGGKMLDAVLLNMRIHGR 252
           L+               +L AA        +     D+  ++VGG  L   L  +   G 
Sbjct: 173 LR---------------ELGAAEVVVGGSELSGAPVDLVVDSVGGPQLARALELLAPGGT 217

Query: 253 IAVCGMIS 260
           +   G  S
Sbjct: 218 VVSVGSSS 225

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 24/172 (13%)

Query: 96  NYKKDDLVWGLT---SWEEY------SLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAY 146
            ++  D V  LT      EY       L+  P+ +       + L+Y         +TAY
Sbjct: 78  GFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNY---------VTAY 128

Query: 147 GGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD 206
             L+       G+ V +  ASG VGQ + + A L G  V G+A S+     L+       
Sbjct: 129 QMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA-SERNHAALRELGAT-- 185

Query: 207 AFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGM 258
             +Y+ +  L A L    P G+D+ F+ VGG+  +     +   G +   G 
Sbjct: 186 PIDYRTKDWLPAMLT---PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGG 234

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 52/205 (25%)

Query: 156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK---------NKFGFDD 206
           KKGE V V+ A G VG    Q AK +G  V+    S+ K  ++          +KF  ++
Sbjct: 161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYVIVGSKFS-EE 219

Query: 207 AFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEK 266
                               G DI  E VG   L+  L ++ + G+I   G +       
Sbjct: 220 VKKI---------------GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNV------D 258

Query: 267 PEGVHNLM--QVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL-------VYVEDI 317
           P   ++L    ++ K I + G ++        + +E  +  + EGK+       V + +I
Sbjct: 259 PSPTYSLRLGYIILKDIEIIGHISAT-----KRDVEEALKLVAEGKIKPVIGAEVSLSEI 313

Query: 318 AEGLEKAPSALVGIFTGQNVGKQLV 342
            + LE+             +GK LV
Sbjct: 314 DKALEELKDK-------SRIGKILV 331

Length = 334

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           GLT Y  L +    K  E     AA+G VG +  Q+AK +G  ++G+ GS +K    K  
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKA 184

Query: 202 FGFDDAFNYKKE 213
            G     NY++E
Sbjct: 185 -GAWQVINYREE 195

Length = 327

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 23/221 (10%)

Query: 138 LGMPGLTAYGGLY-ELC---------SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVG 187
           L +  +TA   L+ +L             KG+ V +   S +VG L  Q AKL G  V+ 
Sbjct: 125 LPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVIT 184

Query: 188 SAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE---GIDIYFENVGGKMLDAVL 244
           +A S +  +L+K   G D  F+Y     ++        +    +D        ++    L
Sbjct: 185 TA-SPKNFDLVK-SLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEAL 242

Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
                 G++     + +   E  +GV  +  V+G  +  E     +F   + K+L     
Sbjct: 243 GR-SGGGKLVSLLPVPE-ETEPRKGVK-VKFVLGYTVFGEIPEDREFGEVFWKYLP---E 296

Query: 305 AIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVV 343
            ++EGKL    V  +  GLE     L  +  G+  G++LVV
Sbjct: 297 LLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVV 337

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 43.7 bits (104), Expect = 7e-05
 Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 16/210 (7%)

Query: 105 GLTSWEEYSLIQSPQH-LIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYV 163
           G +++ EY+++   +  L+KI D + PL     +LG    T  G +      + G+ V V
Sbjct: 136 GCSTFAEYTVV--HEISLVKI-DPDAPLEK-ACLLGCGVTTGIGAVVNTAKVEPGDTVAV 191

Query: 164 SAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKR 222
               G VG    Q AK  G   ++    + EK+ L K KFG     N K+  D+  A+  
Sbjct: 192 FGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVE 249

Query: 223 CFPEGIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRI 281
               G D  FE VG  +++   L      G   + G+       +         V G+  
Sbjct: 250 LTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVA---GAGQEISTRPFQLVTGRVW 306

Query: 282 RMEGFLAGDFYHQYPKFLELVMPAIKEGKL 311
           +   F         P+ ++L M     GKL
Sbjct: 307 KGSAFGGARPRSDIPRLVDLYM----AGKL 332

Length = 366

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 26/224 (11%)

Query: 109 WEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASG 168
           + EY ++ + + L+ + D  VP +    +     LT Y  +      K GE V V    G
Sbjct: 120 FAEYIVVPA-RALVPVPD-GVPFAQAA-VATDAVLTPYHAVVRAGEVKPGETVLVIGL-G 175

Query: 169 AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGI 228
            +G    Q AK +G  V+     +EK+ L K + G D+  N   +   D         G 
Sbjct: 176 GLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLDDSPKDKKAAG-LGGGF 233

Query: 229 DIYFENVGGK--MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGF 286
           D+ F+ VG +    DA    ++  GRI V G      L + +   +L  ++ + +R+ G 
Sbjct: 234 DVIFDFVGTQPTFEDAQKA-VKPGGRIVVVG------LGRDKLTVDLSDLIARELRIIGS 286

Query: 287 LAGDFYHQYPKFLELVMPAIKEGKL------VYVEDIAEGLEKA 324
             G      P+ L  V+  I +GKL        +++I E LE+ 
Sbjct: 287 FGGT-----PEDLPEVLDLIAKGKLDPQVETRPLDEIPEVLERL 325

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 41.0 bits (97), Expect = 6e-04
 Identities = 56/202 (27%), Positives = 84/202 (41%), Gaps = 39/202 (19%)

Query: 77  PGEPLSGYGVSKVLDSTHPNYKKDDLV----WGL--TSWEEYSLIQ--SPQHLIKILDTN 128
           PG  L+G     V++S+ P +K  D V    WG+    W  Y+         L+ + +  
Sbjct: 61  PGIDLAG----TVVESSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPE-- 114

Query: 129 VPLSYYT-GILGMPGLTAYGGLYELC---------SPKKGEYVYVSAASGAVGQL-VGQF 177
             LS      +G  G TA      LC         +P  G  V V+ A+G VG + V   
Sbjct: 115 -GLSARQAMAIGTAGFTAM-----LCVMALEDHGVTPGDGP-VLVTGAAGGVGSVAVALL 167

Query: 178 AKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL-KRCFPEGIDIYFENVG 236
           A+L G  VV S G  E+ + L++  G  +  +  +  +    L K  +   +D     VG
Sbjct: 168 ARL-GYEVVASTGRPEEADYLRS-LGASEIIDRAELSEPGRPLQKERWAGAVD----TVG 221

Query: 237 GKMLDAVLLNMRIHGRIAVCGM 258
           G  L  VL   R  G +A CG+
Sbjct: 222 GHTLANVLAQTRYGGAVAACGL 243

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 9/100 (9%)

Query: 142 GLTAYGGLYELC----SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           GLTA+  L  +         G+ V +   SG VG    Q  K  G +V  +  S + + L
Sbjct: 143 GLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC-STDAIPL 201

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG 237
           +K   G DD  +Y  E   +   +R      D+  + VGG
Sbjct: 202 VK-SLGADDVIDYNNEDFEEELTERG---KFDVILDTVGG 237

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 8/150 (5%)

Query: 111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAV 170
           EY L+  P+  +  L  N+  S     L  P   A   + E    + G+ V V    G +
Sbjct: 122 EYVLV--PEESLHELPENL--SLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPI 176

Query: 171 GQLVGQFAKLVGCYVVGSAGSKEKVNL-LKNKFGFDDAFNYKKEPDLDAALKRCFPEGID 229
           G L  Q AKL G  VV     K++V L +  + G D   N  +E   +   +    +G D
Sbjct: 177 GLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGAD 235

Query: 230 IYFENVGG-KMLDAVLLNMRIHGRIAVCGM 258
           +  E  G    L+  L  +R  GRI   G+
Sbjct: 236 VVIECSGAVPALEQALELLRKGGRIVQVGI 265

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 52/192 (27%), Positives = 75/192 (39%), Gaps = 28/192 (14%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           G+T Y  L     P+ GE V V    G +G L  Q+A+ +G   V    S +K  L + K
Sbjct: 148 GITVYSAL-RDAGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-K 204

Query: 202 FGFDDAFNYKKEPDLDAALKRCFPEGID-IYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
            G D+  +   E D  AA       G D I    V G   +A L  +R  GRI + G+  
Sbjct: 205 LGADEVVDSGAELDEQAAAG-----GADVILVTVVSGAAAEAALGGLRRGGRIVLVGLP- 258

Query: 261 QYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLE---------LVMPAIKEGKL 311
               E P    ++  ++ KR  + G       H     L+          V P I+   L
Sbjct: 259 ----ESPPFSPDIFPLIMKRQSIAG-----STHGGRADLQEALDFAAEGKVKPMIETFPL 309

Query: 312 VYVEDIAEGLEK 323
               +  E +EK
Sbjct: 310 DQANEAYERMEK 321

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 30/194 (15%)

Query: 144 TAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKEKVNLLKN 200
           T + G  EL   K G  V V   +G VG      A+L+G      V S  + E+++L K 
Sbjct: 155 TGFHGA-ELAGIKPGSTVAV-IGAGPVGLCAVAGARLLGAARIIAVDS--NPERLDLAK- 209

Query: 201 KFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNM-RIHGRIAVCGMI 259
           + G  D  N K    ++  L+     G+D   E VG +      + + R  G IA  G+ 
Sbjct: 210 EAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGV- 268

Query: 260 SQYNLEKPEGVHNLMQVVGKRIR-MEGFLAGDFYHQYPKFLELVMPAIKEGKL---VYV- 314
                 KP+ +  L +  GK +    G +           +  ++  I+EGK+     + 
Sbjct: 269 ----YGKPDPLPLLGEWFGKNLTFKTGLVPV------RARMPELLDLIEEGKIDPSKLIT 318

Query: 315 -----EDIAEGLEK 323
                +DI +    
Sbjct: 319 HRFPLDDILKAYRL 332

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	347
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.79
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.67
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.57
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.38
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.3
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.66
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.51
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.44
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.36
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.27
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.22
PLN02494	477	adenosylhomocysteinase	98.17
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.16
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.13
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.09
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.02
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.02
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.01
PRK05993	277	short chain dehydrogenase; Provisional	98.0
PRK08324	681	short chain dehydrogenase; Validated	97.99
PRK05693	274	short chain dehydrogenase; Provisional	97.99
PRK06182	273	short chain dehydrogenase; Validated	97.96
PRK12742	237	oxidoreductase; Provisional	97.95
PRK08265	261	short chain dehydrogenase; Provisional	97.88
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.86
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.86
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.86
PRK08339	263	short chain dehydrogenase; Provisional	97.78
PRK07109	334	short chain dehydrogenase; Provisional	97.76
PLN03209	576	translocon at the inner envelope of chloroplast su	97.76
PRK05872	296	short chain dehydrogenase; Provisional	97.76
PRK12829	264	short chain dehydrogenase; Provisional	97.72
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.72
PRK06198	260	short chain dehydrogenase; Provisional	97.72
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.69
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.69
PRK06500	249	short chain dehydrogenase; Provisional	97.68
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.67
PRK06057	255	short chain dehydrogenase; Provisional	97.66
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.63
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.63
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.62
PRK07326	237	short chain dehydrogenase; Provisional	97.61
PRK12939	250	short chain dehydrogenase; Provisional	97.59
PRK06484	520	short chain dehydrogenase; Validated	97.59
PRK09186	256	flagellin modification protein A; Provisional	97.59
PRK08267	260	short chain dehydrogenase; Provisional	97.58
PRK06139	330	short chain dehydrogenase; Provisional	97.58
PRK07825	273	short chain dehydrogenase; Provisional	97.57
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.57
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.56
PRK07806	248	short chain dehydrogenase; Provisional	97.56
PRK07060	245	short chain dehydrogenase; Provisional	97.54
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.53
PRK06484	520	short chain dehydrogenase; Validated	97.52
PRK07576	264	short chain dehydrogenase; Provisional	97.48
PRK07062	265	short chain dehydrogenase; Provisional	97.48
PLN02780	320	ketoreductase/ oxidoreductase	97.47
PRK06196	315	oxidoreductase; Provisional	97.46
PRK10538	248	malonic semialdehyde reductase; Provisional	97.46
PRK05866	293	short chain dehydrogenase; Provisional	97.46
PRK08177	225	short chain dehydrogenase; Provisional	97.45
PRK05867	253	short chain dehydrogenase; Provisional	97.45
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.44
PRK07832	272	short chain dehydrogenase; Provisional	97.44
PRK08017	256	oxidoreductase; Provisional	97.44
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.44
PRK06949	258	short chain dehydrogenase; Provisional	97.44
PRK07063	260	short chain dehydrogenase; Provisional	97.43
PRK05854	313	short chain dehydrogenase; Provisional	97.42
PRK08263	275	short chain dehydrogenase; Provisional	97.42
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.42
PRK06914	280	short chain dehydrogenase; Provisional	97.41
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.41
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.4
PRK07814	263	short chain dehydrogenase; Provisional	97.39
PRK07478	254	short chain dehydrogenase; Provisional	97.39
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.39
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.39
PRK09072	263	short chain dehydrogenase; Provisional	97.38
PRK07831	262	short chain dehydrogenase; Provisional	97.37
PRK06128	300	oxidoreductase; Provisional	97.36
PRK07890	258	short chain dehydrogenase; Provisional	97.36
PRK06180	277	short chain dehydrogenase; Provisional	97.36
PRK06841	255	short chain dehydrogenase; Provisional	97.36
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.36
PRK12828	239	short chain dehydrogenase; Provisional	97.33
PRK05717	255	oxidoreductase; Validated	97.33
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.32
PRK05876	275	short chain dehydrogenase; Provisional	97.31
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.31
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.3
PRK07024	257	short chain dehydrogenase; Provisional	97.3
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.3
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.29
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.27
PLN02253	280	xanthoxin dehydrogenase	97.27
PRK07904	253	short chain dehydrogenase; Provisional	97.26
PRK07677	252	short chain dehydrogenase; Provisional	97.26
PRK06953	222	short chain dehydrogenase; Provisional	97.26
PRK06194	287	hypothetical protein; Provisional	97.25
PRK06197	306	short chain dehydrogenase; Provisional	97.24
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.24
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.23
PRK08589	272	short chain dehydrogenase; Validated	97.23
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.22
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.22
PRK09242	257	tropinone reductase; Provisional	97.22
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.21
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.21
PRK07067	257	sorbitol dehydrogenase; Provisional	97.21
PRK08251	248	short chain dehydrogenase; Provisional	97.21
PRK08643	256	acetoin reductase; Validated	97.21
PRK07985	294	oxidoreductase; Provisional	97.2
PRK05884	223	short chain dehydrogenase; Provisional	97.2
PRK06482	276	short chain dehydrogenase; Provisional	97.2
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.2
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.19
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.19
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.17
PRK06172	253	short chain dehydrogenase; Provisional	97.15
PRK08703	239	short chain dehydrogenase; Provisional	97.15
PRK07035	252	short chain dehydrogenase; Provisional	97.15
PRK08862	227	short chain dehydrogenase; Provisional	97.15
PRK07774	250	short chain dehydrogenase; Provisional	97.14
PRK06483	236	dihydromonapterin reductase; Provisional	97.14
PRK06138	252	short chain dehydrogenase; Provisional	97.14
PRK06125	259	short chain dehydrogenase; Provisional	97.14
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.13
PRK06720	169	hypothetical protein; Provisional	97.12
PRK06179	270	short chain dehydrogenase; Provisional	97.12
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.11
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.11
PRK05875	276	short chain dehydrogenase; Provisional	97.11
PRK06181	263	short chain dehydrogenase; Provisional	97.11
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.11
PRK07454	241	short chain dehydrogenase; Provisional	97.1
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.1
PRK12937	245	short chain dehydrogenase; Provisional	97.09
KOG0725	270	consensus Reductases with broad range of substrate	97.09
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.09
PRK08628	258	short chain dehydrogenase; Provisional	97.09
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.08
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.07
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.06
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.06
PRK09291	257	short chain dehydrogenase; Provisional	97.05
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.05
PRK07074	257	short chain dehydrogenase; Provisional	97.04
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.03
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.03
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.03
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.02
CHL00194	317	ycf39 Ycf39; Provisional	97.01
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.99
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.99
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	96.99
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.99
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.99
PRK07069	251	short chain dehydrogenase; Validated	96.99
PRK04148	134	hypothetical protein; Provisional	96.98
PRK07791	286	short chain dehydrogenase; Provisional	96.98
COG4122	219	Predicted O-methyltransferase [General function pr	96.97
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.96
PRK12747	252	short chain dehydrogenase; Provisional	96.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.95
PRK07856	252	short chain dehydrogenase; Provisional	96.94
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.94
PRK06114	254	short chain dehydrogenase; Provisional	96.94
PRK08226	263	short chain dehydrogenase; Provisional	96.93
PRK12367	245	short chain dehydrogenase; Provisional	96.92
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.92
PRK06701	290	short chain dehydrogenase; Provisional	96.92
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.92
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.91
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.9
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.9
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.89
COG2910	211	Putative NADH-flavin reductase [General function p	96.88
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.87
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.87
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.86
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.86
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.86
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	96.86
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.85
PRK06398	258	aldose dehydrogenase; Validated	96.84
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.84
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.83
PRK08303	305	short chain dehydrogenase; Provisional	96.83
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.83
PLN02476	278	O-methyltransferase	96.8
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.8
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.8
PRK06940	275	short chain dehydrogenase; Provisional	96.8
PRK06101	240	short chain dehydrogenase; Provisional	96.8
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.78
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.78
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.77
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.76
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.76
PRK05650	270	short chain dehydrogenase; Provisional	96.76
PRK07577	234	short chain dehydrogenase; Provisional	96.76
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.76
PRK06523	260	short chain dehydrogenase; Provisional	96.72
PRK09135	249	pteridine reductase; Provisional	96.72
PRK07775	274	short chain dehydrogenase; Provisional	96.71
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.7
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.69
PRK12743	256	oxidoreductase; Provisional	96.66
PRK08278	273	short chain dehydrogenase; Provisional	96.66
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.64
PRK08264	238	short chain dehydrogenase; Validated	96.63
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.61
KOG1208	314	consensus Dehydrogenases with different specificit	96.57
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.57
PRK05599	246	hypothetical protein; Provisional	96.57
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	96.55
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.54
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.54
PRK09134	258	short chain dehydrogenase; Provisional	96.54
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.53
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.53
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	96.52
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.51
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.51
PLN00015	308	protochlorophyllide reductase	96.5
TIGR00438	188	rrmJ cell division protein FtsJ.	96.49
PRK07201	657	short chain dehydrogenase; Provisional	96.48
PRK12746	254	short chain dehydrogenase; Provisional	96.47
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.47
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.47
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.46
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	96.46
PRK05855	582	short chain dehydrogenase; Validated	96.45
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.45
PLN02589	247	caffeoyl-CoA O-methyltransferase	96.44
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.42
PRK07102	243	short chain dehydrogenase; Provisional	96.41
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.4
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.38
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.35
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.33
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.32
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.32
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.32
PRK00811	283	spermidine synthase; Provisional	96.29
PRK08309	177	short chain dehydrogenase; Provisional	96.28
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.26
PRK07402	196	precorrin-6B methylase; Provisional	96.24
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.22
PRK07041	230	short chain dehydrogenase; Provisional	96.22
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.2
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.2
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	96.18
PLN02366	308	spermidine synthase	96.18
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.18
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.17
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.16
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.13
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.13
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.12
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.11
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.11
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.1
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.09
PLN03075	296	nicotianamine synthase; Provisional	96.09
PRK08219	227	short chain dehydrogenase; Provisional	96.09
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.08
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.07
PRK06123	248	short chain dehydrogenase; Provisional	96.07
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.07
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.07
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.07
PRK04457	262	spermidine synthase; Provisional	96.05
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.05
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.03
PRK07578	199	short chain dehydrogenase; Provisional	96.02
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.01
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.01
PRK12744	257	short chain dehydrogenase; Provisional	96.0
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.0
PLN00016	378	RNA-binding protein; Provisional	95.99
PRK11207	197	tellurite resistance protein TehB; Provisional	95.97
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.96
PRK12827	249	short chain dehydrogenase; Provisional	95.93
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.93
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.91
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.91
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.91
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.89
PRK07023	243	short chain dehydrogenase; Provisional	95.88
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.86
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.86
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.85
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.83
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.82
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.8
PLN02244	340	tocopherol O-methyltransferase	95.79
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.78
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.78
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.75
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	95.75
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.75
PLN02686	367	cinnamoyl-CoA reductase	95.74
PRK08618	325	ornithine cyclodeaminase; Validated	95.73
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.7
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.66
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.64
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.63
PRK14982	340	acyl-ACP reductase; Provisional	95.61
COG3963	194	Phospholipid N-methyltransferase [Lipid metabolism	95.6
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.57
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.57
PRK08655	437	prephenate dehydrogenase; Provisional	95.57
COG1028	251	FabG Dehydrogenases with different specificities (	95.54
PRK06924	251	short chain dehydrogenase; Provisional	95.53
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.53
PRK01581	374	speE spermidine synthase; Validated	95.5
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	95.46
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.44
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.42
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	95.4
PRK13243	333	glyoxylate reductase; Reviewed	95.39
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.38
PRK00536	262	speE spermidine synthase; Provisional	95.35
PRK08317	241	hypothetical protein; Provisional	95.33
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	95.33
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	95.28
PLN02214	342	cinnamoyl-CoA reductase	95.27
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	95.26
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.25
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.24
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.21
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.2
KOG1252	362	consensus Cystathionine beta-synthase and related	95.19
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.18
PLN02653	340	GDP-mannose 4,6-dehydratase	95.15
PRK14967	223	putative methyltransferase; Provisional	95.13
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.12
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	95.09
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	95.09
PLN02427	386	UDP-apiose/xylose synthase	95.07
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	95.07
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.06
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	95.06
PRK07574	385	formate dehydrogenase; Provisional	95.02
PLN00203	519	glutamyl-tRNA reductase	95.01
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.99
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	94.99
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.99
PLN03139	386	formate dehydrogenase; Provisional	94.98
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.96
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	94.96
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.96
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.93
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.93
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.93
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	94.92
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.89
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	94.88
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.87
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	94.87
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	94.86
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.85
PLN00198	338	anthocyanidin reductase; Provisional	94.84
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	94.8
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.78
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	94.78
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	94.76
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.76

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=5.5e-56  Score=385.84  Aligned_cols=307  Identities=24%  Similarity=0.294  Sum_probs=274.0

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      |++|||+++.++  ++|    +++.  +++.|.| ++ +||+|||+|||+|.+|++.++|.+.... +|++||||  .+|
T Consensus         1 ~~~mkA~~~~~~--~~p----l~i~--e~~~p~p-~~-~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHE--ivG   67 (339)
T COG1064           1 MMTMKAAVLKKF--GQP----LEIE--EVPVPEP-GP-GEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHE--IVG   67 (339)
T ss_pred             CcceEEEEEccC--CCC----ceEE--eccCCCC-CC-CeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcc--eEE
Confidence            578999999999  777    3444  4677766 77 9999999999999999999999775433 89999999  556


Q ss_pred             EEEEecCCCCCCCCCCEEEe-c------------------------------cCcceeEeecCCCcceeccCCCCCcccc
Q 019042           86 VSKVLDSTHPNYKKDDLVWG-L------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYY  134 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~-~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~  134 (347)
                      +|+++|++|++|++||||.. +                              |+|+||+++++++ ++++ |++++.. +
T Consensus        68 ~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~-~~~i-P~~~d~~-~  144 (339)
T COG1064          68 TVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARY-VVKI-PEGLDLA-E  144 (339)
T ss_pred             EEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHH-eEEC-CCCCChh-h
Confidence            99999999999999999964 2                              7999999999999 9999 9996665 6


Q ss_pred             ccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChh
Q 019042          135 TGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEP  214 (347)
Q Consensus       135 aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~  214 (347)
                      +|.|.|++.|.|++|.+ .+++||++|+|+|+ |++|++++|+|+++|++|++++++++|+++++ ++|+++++|.++. 
T Consensus       145 aApllCaGiT~y~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~~-  220 (339)
T COG1064         145 AAPLLCAGITTYRALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDS-  220 (339)
T ss_pred             hhhhhcCeeeEeeehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcCCc-
Confidence            99999999999999965 89999999999997 79999999999999999999999999999999 9999999998765 


Q ss_pred             hHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccc
Q 019042          215 DLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ  294 (347)
Q Consensus       215 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  294 (347)
                      +..+.+++.    +|++||+++..+++.+++.|+++|+++++|.+..    .+....+.+.++.+++++.|+..+.    
T Consensus       221 ~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~----  288 (339)
T COG1064         221 DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT----  288 (339)
T ss_pred             hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC----
Confidence            777777764    9999999997799999999999999999998641    1223456788889999999999888    


Q ss_pred             hHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          295 YPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       295 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                       +.++++++++..+|++++.+...++++|+++||+.+.+++..|++||++.
T Consensus       289 -~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         289 -RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             -HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence             78999999999999999999888999999999999999999999999875

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=3.4e-53  Score=377.70  Aligned_cols=317  Identities=28%  Similarity=0.417  Sum_probs=275.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  ++|+    .++..|+|.|.| ++ +||||||+++|+|+.|.....|.......+|+++|.|  ++|+|+
T Consensus         1 mka~~~~~~--g~~~----~l~~~e~~~P~p-~~-geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d--~aG~V~   70 (326)
T COG0604           1 MKAVVVEEF--GGPE----VLKVVEVPEPEP-GP-GEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSE--AAGVVV   70 (326)
T ss_pred             CeEEEEecc--CCCc----eeEEEecCCCCC-CC-CeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccce--eEEEEE
Confidence            689999998  8885    366666888877 77 9999999999999999998888644445689999999  556999


Q ss_pred             EecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEE
Q 019042           89 VLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVY  162 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vl  162 (347)
                      ++|++|+.+++||+|+++      |+|+||++++++. ++++ |++++.. ++|+++++++|||++++...++++|++||
T Consensus        71 avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~-~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~~l~~g~~VL  147 (326)
T COG0604          71 AVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADW-LVPL-PDGLSFE-EAAALPLAGLTAWLALFDRAGLKPGETVL  147 (326)
T ss_pred             EeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHH-ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence            999999999999999987      6999999999999 9999 9996555 79999999999999999989999999999


Q ss_pred             EEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHH
Q 019042          163 VSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLD  241 (347)
Q Consensus       163 I~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~  241 (347)
                      |+||+|++|.+++|+||++|+.++++++++++.++++ ++|++++++|.++ ++.+.+++++++ ++|+|||+.|++.+.
T Consensus       148 V~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~~~~  225 (326)
T COG0604         148 VHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFA  225 (326)
T ss_pred             EecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHHHHH
Confidence            9999999999999999999988777777888778888 9999999999997 899999999998 899999999999999


Q ss_pred             HHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccccceeec
Q 019042          242 AVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVEDIAEG  320 (347)
Q Consensus       242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  320 (347)
                      .++++|+++|+++.+|..++    ......+...++.++++..+...... ++...+.++++.+++++|.+++.++.+||
T Consensus       226 ~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~  301 (326)
T COG0604         226 ASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYP  301 (326)
T ss_pred             HHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEec
Confidence            99999999999999999763    12223456777778888888776532 24556788899999999999999999999


Q ss_pred             cccHHHHHHHhHc-CCCcceEEEEe
Q 019042          321 LEKAPSALVGIFT-GQNVGKQLVVV  344 (347)
Q Consensus       321 ~~~~~~a~~~~~~-~~~~gkivi~~  344 (347)
                      ++|...+..+... ++..||+|+++
T Consensus       302 l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         302 LAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             hhhhHHHHHHHHcccCCcceEEEeC
Confidence            9996555555444 48899999974

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1e-51  Score=335.29  Aligned_cols=326  Identities=23%  Similarity=0.273  Sum_probs=280.3

Q ss_pred             CccccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCc
Q 019042            1 MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEP   80 (347)
Q Consensus         1 ~~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e   80 (347)
                      |++..|+..|.+++++.  |++  +.+++++  .|.|.| .+ +|++||..|+|+|..|.-...|.+. ..+.|++||.|
T Consensus         1 ~~~~~p~~~k~i~v~e~--Ggy--dvlk~ed--~pv~~p-ap-gel~iknka~GlNfid~y~RkGlY~-~~plPytpGmE   71 (336)
T KOG1197|consen    1 AAAASPPLLKCIVVTEF--GGY--DVLKLED--RPVPPP-AP-GELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGME   71 (336)
T ss_pred             CCCCCCchheEEEEecc--CCc--ceEEEee--ecCCCC-CC-CceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcc
Confidence            67778999999999999  888  4555555  555545 66 9999999999999999988888664 56779999988


Q ss_pred             eeeceEEEEecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCC
Q 019042           81 LSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKK  157 (347)
Q Consensus        81 ~~g~G~v~~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  157 (347)
                        ++|+|+++|++|+++++||||+.+   |.|++++.+|... ++++ |+.+++. ++|++...++|||..+++..++++
T Consensus        72 --aaGvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~k-v~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vkp  146 (336)
T KOG1197|consen   72 --AAGVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVK-VFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVKP  146 (336)
T ss_pred             --cceEEEEecCCccccccccEEEEeccchhhheecccccee-eccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCCC
Confidence              778999999999999999999976   7899999999999 9999 9996665 688999999999999999999999


Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g  236 (347)
                      |++||++.|.||+|++++|+++..|+++|+++++.+|.+.++ +-|+.+.|+|+.+ |+.+++.++|.+ |+|+++|.+|
T Consensus       147 GhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsvG  224 (336)
T KOG1197|consen  147 GHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSVG  224 (336)
T ss_pred             CCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeecccc
Confidence            999999999999999999999999999999999999999999 9999999999998 999999999977 9999999999


Q ss_pred             chhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc---ccchHHHHHHHHHHHHcCCccc
Q 019042          237 GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF---YHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                      .+++..++.+|++.|.+|++|..++...     +..+..+..+++.+...++..|   +.....-..+++.++.+|.+++
T Consensus       225 ~dt~~~sl~~Lk~~G~mVSfG~asgl~~-----p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~  299 (336)
T KOG1197|consen  225 KDTFAKSLAALKPMGKMVSFGNASGLID-----PIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKI  299 (336)
T ss_pred             chhhHHHHHHhccCceEEEeccccCCCC-----CeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccce
Confidence            9999999999999999999998765422     2233334444554443332222   2222334567888888999999


Q ss_pred             ccceeeccccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          314 VEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       314 ~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      .|.++|||+++.+|+..+++++..||+++.+++|
T Consensus       300 ~I~~~ypls~vadA~~diesrktvGkvlLlp~~~  333 (336)
T KOG1197|consen  300 HIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE  333 (336)
T ss_pred             eeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence            9999999999999999999999999999988764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-49  Score=360.20  Aligned_cols=339  Identities=65%  Similarity=1.137  Sum_probs=281.4

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEee-cccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITG-SINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~-~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ..++|.|++.+.+.|.|.+..|++.+. +.+.|.|.++ +|||||+.++++||.|+..+.+.. ....+|+++|+++.|.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~-gevlVkv~a~~inp~~~~~~~~~~-~~~~~p~~~G~~~~~~   83 (348)
T PLN03154          6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGS-GAFLVKNLYLSCDPYMRGRMRDFH-DSYLPPFVPGQRIEGF   83 (348)
T ss_pred             cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCC-CeEEEEEEEEccCHHHHHhhhccC-CCCCCCcCCCCeeEee
Confidence            356899999999999999999999885 4666655577 999999999999999987554322 1234689999977788


Q ss_pred             eEEEEecCCCCCCCCCCEEEeccCcceeEeecCCC-cc--eeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQ-HL--IKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYV  161 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~-~~--~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~v  161 (347)
                      |+|..+|++++++++||+|+++|+|++|++++++. .+  +++ |++++.+.++++++++++|||+++.+..++++|++|
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~V  162 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSV  162 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEE
Confidence            99999999999999999999999999999998752 24  446 888555434779999999999999877899999999


Q ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHH
Q 019042          162 YVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD  241 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~  241 (347)
                      +|+|++|++|++++|+|+++|++|+++++++++.+.+++++|+++++|+++.+++.+.+++.+++++|++|||+|+..+.
T Consensus       163 lV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~  242 (348)
T PLN03154        163 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLD  242 (348)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHH
Confidence            99999999999999999999999999999999999886469999999987422677888887766899999999998999


Q ss_pred             HHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeecc
Q 019042          242 AVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGL  321 (347)
Q Consensus       242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  321 (347)
                      .++++++++|+++.+|...+..........+...++.+++++.|+....+.....+.++++++++++|++++.+..+|+|
T Consensus       243 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L  322 (348)
T PLN03154        243 AALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGL  322 (348)
T ss_pred             HHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCH
Confidence            99999999999999997543211101111244567778999999876554333456789999999999999988888999


Q ss_pred             ccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          322 EKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       322 ~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      +++++|++.+.+++..||+||++.+|
T Consensus       323 ~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        323 ESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             HHHHHHHHHHHcCCCCceEEEEecCC
Confidence            99999999999999999999999764

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.1e-48  Score=328.04  Aligned_cols=311  Identities=20%  Similarity=0.199  Sum_probs=264.9

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCc--ccCCCCCCceee
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSF--VASFNPGEPLSG   83 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~--~~p~v~G~e~~g   83 (347)
                      ..+|+|+++...       .+++++  +.|.|+++.| +||+|+++++|||++|.|.+.......+  ..|.++|||  .
T Consensus         2 ~~~~~A~vl~g~-------~di~i~--~~p~p~i~~p-~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHE--s   69 (354)
T KOG0024|consen    2 AADNLALVLRGK-------GDIRIE--QRPIPTITDP-DEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHE--S   69 (354)
T ss_pred             CcccceeEEEcc-------CceeEe--eCCCCCCCCC-CEEEEEeeeEEecCccchhhccCCcCccccccccccccc--c
Confidence            356899999776       334555  6888888788 9999999999999999999987655433  359999999  5


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCcceeccCCCCCcc
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQHLIKILDTNVPLS  132 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~  132 (347)
                      +|+|.++|+.|+++++||||+.-                               |++++|++.+++. ++|+ ||+  ++
T Consensus        70 sGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~df-c~KL-Pd~--vs  145 (354)
T KOG0024|consen   70 SGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADF-CYKL-PDN--VS  145 (354)
T ss_pred             ccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHh-eeeC-CCC--Cc
Confidence            56999999999999999999721                               7899999999999 9999 999  66


Q ss_pred             ccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          133 YYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       133 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                      ++.++|..+++++|++. +++++++|++|||+|| |++|+++...||++|+ +|++++-.+.|++.++ +||++.+.+..
T Consensus       146 ~eeGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~  222 (354)
T KOG0024|consen  146 FEEGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPSS  222 (354)
T ss_pred             hhhcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeecc
Confidence            67889999999999999 5589999999999997 9999999999999999 8999999999999999 89998776655


Q ss_pred             Ch---hhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeee
Q 019042          212 KE---PDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGF  286 (347)
Q Consensus       212 ~~---~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  286 (347)
                      ..   .++.+.+....++ .+|+.|||+|. .+++.++..++.+|++++.++-.      +...++......|++++.|+
T Consensus       223 ~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~g~  296 (354)
T KOG0024|consen  223 HKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLRGS  296 (354)
T ss_pred             ccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeeeee
Confidence            42   2455556655554 79999999998 59999999999999999998732      34456788888999999999


Q ss_pred             EecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCC-cceEEEEeCC
Q 019042          287 LAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQN-VGKQLVVVAP  346 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~gkivi~~~~  346 (347)
                      ..+.     +..+..+++++++|++.  +.++..|+++++.+||+.+.+++. .-|+++..++
T Consensus       297 fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  297 FRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             eeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence            8776     56899999999999985  679999999999999999988774 3499988754

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=9e-48  Score=321.04  Aligned_cols=330  Identities=47%  Similarity=0.818  Sum_probs=294.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      .+.+++...+.|.|.+++|++++.++|  +| ++ +|||+|+.|.|++|+.+.++....  .+.+|+-+|..+.|-++.+
T Consensus         9 ~~~~~la~rP~g~p~~d~F~lee~~vp--~p-~~-GqvLl~~~ylS~DPymRgrm~d~~--SY~~P~~lG~~~~gg~V~~   82 (340)
T COG2130           9 NRRIVLASRPEGAPVPDDFRLEEVDVP--EP-GE-GQVLLRTLYLSLDPYMRGRMSDAP--SYAPPVELGEVMVGGTVAK   82 (340)
T ss_pred             hheeeeccCCCCCCCCCCceeEeccCC--CC-Cc-CceEEEEEEeccCHHHeecccCCc--ccCCCcCCCceeECCeeEE
Confidence            388999999899999999999886655  45 77 999999999999998887776533  5678999999999867777


Q ss_pred             EecCCCCCCCCCCEEEeccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCC
Q 019042           89 VLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASG  168 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g  168 (347)
                      .+-|+...|++||.|.+..+|++|.+++.+. +.|++|...++++....|..++.|||.+|.+.++.++|++|+|.+|+|
T Consensus        83 Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~-l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaG  161 (340)
T COG2130          83 VVASNHPGFQPGDIVVGVSGWQEYAISDGEG-LRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAG  161 (340)
T ss_pred             EEecCCCCCCCCCEEEecccceEEEeechhh-ceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEeccc
Confidence            7788999999999999999999999999998 999976665666668899999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHHHHHhhc
Q 019042          169 AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMR  248 (347)
Q Consensus       169 ~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~  248 (347)
                      ++|..+.|+||..|++|+.++.+++|.+++++.+|.+.++||+.+ ++.+.+.+.+++++|+.||++|++.++..+..|+
T Consensus       162 aVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln  240 (340)
T COG2130         162 AVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLN  240 (340)
T ss_pred             ccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhc
Confidence            999999999999999999999999999999966999999999998 9999999999999999999999999999999999


Q ss_pred             cCCEEEEEcccccccCC-CCccccchHHHHhccceeeeeEe-cccccchHHHHHHHHHHHHcCCcccccceeeccccHHH
Q 019042          249 IHGRIAVCGMISQYNLE-KPEGVHNLMQVVGKRIRMEGFLA-GDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPS  326 (347)
Q Consensus       249 ~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  326 (347)
                      ..+|++.||..+.+|.. .+.....+..++.+++++.|+.. ..+.....+.++++..|+++|+|+...+.+-.||.+++
T Consensus       241 ~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~  320 (340)
T COG2130         241 LFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPE  320 (340)
T ss_pred             cccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHH
Confidence            99999999998887764 33344556777778999999987 44455556899999999999999998876669999999


Q ss_pred             HHHHhHcCCCcceEEEEeCC
Q 019042          327 ALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       327 a~~~~~~~~~~gkivi~~~~  346 (347)
                      ||.-+.+++.+||.|+++.+
T Consensus       321 Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         321 AFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             HHHHHhcCCccceEEEEecC
Confidence            99999999999999999864

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.9e-48  Score=323.42  Aligned_cols=311  Identities=20%  Similarity=0.200  Sum_probs=267.9

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      .+.++++|++.++  +++.    ..+..+++.|+| ++ +||+||++|||||.+|++.+.+.+.. ..+|+++|||  ++
T Consensus         6 ~p~k~~g~~~~~~--~G~l----~p~~~~~~~~~~-g~-~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHE--ia   74 (360)
T KOG0023|consen    6 IPEKQFGWAARDP--SGVL----SPEVFSFPVREP-GE-NDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHE--IA   74 (360)
T ss_pred             CchhhEEEEEECC--CCCC----CcceeEcCCCCC-CC-CcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCce--ee
Confidence            4789999999998  6642    344455777766 88 99999999999999999999997765 7889999999  77


Q ss_pred             eEEEEecCCCCCCCCCCEEE-ec-------------------------------------cCcceeEeecCCCcceeccC
Q 019042           85 GVSKVLDSTHPNYKKDDLVW-GL-------------------------------------TSWEEYSLIQSPQHLIKILD  126 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~-~~-------------------------------------g~~~~~~~~~~~~~~~~i~P  126 (347)
                      |+|+++|++|++|++||||= ++                                     |+|++|+++++.. +++| |
T Consensus        75 G~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~-a~kI-P  152 (360)
T KOG0023|consen   75 GVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVF-AIKI-P  152 (360)
T ss_pred             EEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeee-EEEC-C
Confidence            79999999999999999983 10                                     5799999999999 9999 9


Q ss_pred             CCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHhCCC
Q 019042          127 TNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKNKFGFD  205 (347)
Q Consensus       127 ~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~~~g~~  205 (347)
                      +++++. +||.|.|++.|.|..|. ..++.||+++.|.|+ ||+|.+++|+||++|.+|+++++++. |.+.++ .||++
T Consensus       153 ~~~pl~-~aAPlLCaGITvYspLk-~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~-~LGAd  228 (360)
T KOG0023|consen  153 ENLPLA-SAAPLLCAGITVYSPLK-RSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIK-SLGAD  228 (360)
T ss_pred             CCCChh-hccchhhcceEEeehhH-HcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHH-hcCcc
Confidence            998887 79999999999999994 579999999999997 66999999999999999999999984 445555 89998


Q ss_pred             eeEecC-ChhhHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceee
Q 019042          206 DAFNYK-KEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRME  284 (347)
Q Consensus       206 ~vi~~~-~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      .-++.. ++ |+.+.+...+.+.+|-+.+. ....+..++.++|.+|++|.+|.+..      ...++.+.+..+.+++.
T Consensus       229 ~fv~~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I~  300 (360)
T KOG0023|consen  229 VFVDSTEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSIK  300 (360)
T ss_pred             eeEEecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEEE
Confidence            777766 55 88899988877677777655 34688999999999999999999753      23567788888999999


Q ss_pred             eeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          285 GFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       285 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      |+..+.     +.+.++++++++.+.+++.+. ..+++++++||+.+.++...+|.|+++..
T Consensus       301 GS~vG~-----~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  301 GSIVGS-----RKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             eecccc-----HHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            999887     788999999999999998775 45999999999999999999999998853

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.1e-46  Score=341.82  Aligned_cols=333  Identities=70%  Similarity=1.184  Sum_probs=272.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeeccc--CCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSIN--LKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~--~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~   86 (347)
                      .|.+++++...+.|.++.|++++..+|  .|+| ++ +||||||+++++||.|+....|.......+|+++|+++.|.|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p-~~-~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~   80 (338)
T cd08295           3 NKQVILKAYVTGFPKESDLELRTTKLTLKVPPG-GS-GDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGV   80 (338)
T ss_pred             ceEEEEecCCCCCCCccceEEEEecCCcCCCCC-CC-CeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEE
Confidence            466777776656777788999887763  3555 77 9999999999999999988877432223568899998888889


Q ss_pred             EEEecCCCCCCCCCCEEEeccCcceeEeecC-CCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           87 SKVLDSTHPNYKKDDLVWGLTSWEEYSLIQS-PQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~-~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      +..+|++++++++||+|+++|+|+||+++++ .. +++++|++++.+++++++++++.|||+++.+..++++|++|+|+|
T Consensus        81 ~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~-~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~G  159 (338)
T cd08295          81 AKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQD-LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSA  159 (338)
T ss_pred             EEEEecCCCCCCCCCEEEecCCceeEEEecchhc-eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEec
Confidence            9999999999999999999999999999999 67 999823565554358899999999999998778999999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL  245 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~  245 (347)
                      ++|++|++++|+|+++|++|+++++++++.+++++.+|+++++++++.+++.+.+++.+++++|++||++|+..+..+++
T Consensus       160 a~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~  239 (338)
T cd08295         160 ASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLL  239 (338)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHH
Confidence            99999999999999999999999999999999983399999999764227778888877668999999999988999999


Q ss_pred             hhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHH
Q 019042          246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAP  325 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  325 (347)
                      +++++|+++.+|..............+......+++++.++....++....+.++++++++.+|++++.+...|+++++.
T Consensus       240 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~  319 (338)
T cd08295         240 NMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAP  319 (338)
T ss_pred             HhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHH
Confidence            99999999999875432110000112334566678888886655543344567889999999999998777789999999


Q ss_pred             HHHHHhHcCCCcceEEEEe
Q 019042          326 SALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       326 ~a~~~~~~~~~~gkivi~~  344 (347)
                      +|++.+.+++..||+|+++
T Consensus       320 ~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         320 EAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHhcCCCCceEEEEC
Confidence            9999999999899999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=5.9e-47  Score=322.15  Aligned_cols=310  Identities=22%  Similarity=0.249  Sum_probs=266.6

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceE
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~   86 (347)
                      |++||+++.++  ++|    +++++.+++.  | ++ +||+||+.++|+|.+|....+|....  .+|.++|||  |.|+
T Consensus         1 mk~~aAV~~~~--~~P----l~i~ei~l~~--P-~~-gEVlVri~AtGVCHTD~~~~~G~~p~--~~P~vLGHE--gAGi   66 (366)
T COG1062           1 MKTRAAVAREA--GKP----LEIEEVDLDP--P-RA-GEVLVRITATGVCHTDAHTLSGDDPE--GFPAVLGHE--GAGI   66 (366)
T ss_pred             CCceEeeeecC--CCC----eEEEEEecCC--C-CC-CeEEEEEEEeeccccchhhhcCCCCC--CCceecccc--cccE
Confidence            67899999998  999    6777766653  3 66 99999999999999999888886533  389999999  8889


Q ss_pred             EEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeEee
Q 019042           87 SKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYSLI  115 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~~  115 (347)
                      |++||++|+++++||.|+..                                                   ++|++|.++
T Consensus        67 Ve~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv  146 (366)
T COG1062          67 VEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVV  146 (366)
T ss_pred             EEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheee
Confidence            99999999999999999832                                                   379999999


Q ss_pred             cCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHH
Q 019042          116 QSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEK  194 (347)
Q Consensus       116 ~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~  194 (347)
                      ++.+ +.|+ +...++. .++.|.|...|.+.+..+.+++++|++|.|.| .|++|++++|-|+..|+ ++++++.+++|
T Consensus       147 ~~~s-~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~K  222 (366)
T COG1062         147 HEIS-LVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEK  222 (366)
T ss_pred             cccc-eEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHH
Confidence            9999 9999 6665554 58888999999999998999999999999999 69999999999999999 89999999999


Q ss_pred             HHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccch
Q 019042          195 VNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL  273 (347)
Q Consensus       195 ~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  273 (347)
                      +++++ +||+.+++|.++..++.+.+.++|++++|++|||+|. ..+++++.++.++|+.+++|.....    ..-+.+.
T Consensus       223 l~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~----~~i~~~~  297 (366)
T COG1062         223 LELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG----QEISTRP  297 (366)
T ss_pred             HHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC----ceeecCh
Confidence            99999 9999999998875469999999999899999999999 7999999999999999999985422    1222444


Q ss_pred             HHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          274 MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       274 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      ..+... .+++|+.++.-..  +.++..++++..+|+|+  ..+++.++|||+++||+.+.+++.+ |.||.
T Consensus       298 ~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         298 FQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             HHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            555544 8888888776422  46799999999999997  4688899999999999999999877 66654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.3e-45  Score=338.51  Aligned_cols=312  Identities=19%  Similarity=0.238  Sum_probs=262.5

Q ss_pred             cceEEEeeccCCCC----CCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            9 NKQVILSNYVTGFP----KESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         9 ~~a~~~~~~~~~~p----~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      |||+++.++  |.|    +++.+++++  +|.|.| ++ +||+||+.+++||++|++.+.+..  ...+|.++|||++  
T Consensus         1 mka~~~~~~--g~~~~~~~~~~l~~~~--~~~P~~-~~-~evlV~v~~~gi~~~D~~~~~g~~--~~~~p~i~GhE~~--   70 (371)
T cd08281           1 MRAAVLRET--GAPTPYADSRPLVIEE--VELDPP-GP-GEVLVKIAAAGLCHSDLSVINGDR--PRPLPMALGHEAA--   70 (371)
T ss_pred             CcceEEEec--ccccccccCCCceEEE--eecCCC-CC-CeEEEEEEEEeeCccchHhhcCCC--CCCCCccCCccce--
Confidence            699999998  643    134556654  666666 77 999999999999999999887753  2346899999955  


Q ss_pred             eEEEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYS  113 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~  113 (347)
                      |+|+++|++++++++||+|++.                                                   |+|++|+
T Consensus        71 G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~  150 (371)
T cd08281          71 GVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYA  150 (371)
T ss_pred             eEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeE
Confidence            5999999999999999999852                                                   5899999


Q ss_pred             eecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH
Q 019042          114 LIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK  192 (347)
Q Consensus       114 ~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~  192 (347)
                      +++++. ++++ |++++.. +++.+++.+.|||+++....++++|++|+|+|+ |++|++++|+|+..|+ +|+++++++
T Consensus       151 ~v~~~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~  226 (371)
T cd08281         151 VVSRRS-VVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNE  226 (371)
T ss_pred             Eecccc-eEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCH
Confidence            999998 9999 9995554 588888899999999877789999999999985 9999999999999999 699999999


Q ss_pred             HHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCcccc
Q 019042          193 EKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVH  271 (347)
Q Consensus       193 ~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  271 (347)
                      +|+++++ ++|+++++++.+. ++.+.+++++++++|++|||+|. ..+..++++++++|+++.+|.....    .....
T Consensus       227 ~r~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~  300 (371)
T cd08281         227 DKLALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSV  300 (371)
T ss_pred             HHHHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeee
Confidence            9999998 9999999998876 88888888877689999999987 6889999999999999999875321    11234


Q ss_pred             chHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          272 NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       272 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +...++.+++++.|+....+.  .++.++++++++++|++++  .++++|+++|+++||+.+.+++..+|+|+
T Consensus       301 ~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         301 PALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             cHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            556778899999998776542  2467889999999999975  57889999999999999999988888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=3e-44  Score=327.98  Aligned_cols=309  Identities=19%  Similarity=0.234  Sum_probs=258.7

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      +|||++++++  +.|    +++++  +|.|.| ++ +||+||+.++++|++|++...+...  ..+|+++|||  ++|+|
T Consensus         1 ~mka~~~~~~--~~~----~~~~~--~~~p~~-~~-~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~G~e--~~G~V   66 (358)
T TIGR03451         1 TVRGVIARSK--GAP----VELET--IVVPDP-GP-GEVIVDIQACGVCHTDLHYREGGIN--DEFPFLLGHE--AAGVV   66 (358)
T ss_pred             CcEEEEEccC--CCC----CEEEE--EECCCC-CC-CeEEEEEEEEeecHHHHHHhcCCcc--ccCCcccccc--eEEEE
Confidence            5899999998  766    45554  666766 77 9999999999999999988877432  3468999999  55699


Q ss_pred             EEecCCCCCCCCCCEEEe-------------------------------------------ccCcceeEeecCCCcceec
Q 019042           88 KVLDSTHPNYKKDDLVWG-------------------------------------------LTSWEEYSLIQSPQHLIKI  124 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~-------------------------------------------~g~~~~~~~~~~~~~~~~i  124 (347)
                      +++|++++++++||+|++                                           .|+|+||++++++. ++++
T Consensus        67 ~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~i  145 (358)
T TIGR03451        67 EAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQ-CTKV  145 (358)
T ss_pred             EEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhh-eEEC
Confidence            999999999999999975                                           27899999999998 9999


Q ss_pred             cCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC
Q 019042          125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFG  203 (347)
Q Consensus       125 ~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g  203 (347)
                       |++++.. +++.+++.+.+||+++.....+++|++|+|+|+ |++|++++|+|+..|+ +|++++++++++++++ ++|
T Consensus       146 -p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~G  221 (358)
T TIGR03451       146 -DPAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EFG  221 (358)
T ss_pred             -CCCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcC
Confidence             9995554 588888899999998877788999999999985 9999999999999999 5999999999999998 999


Q ss_pred             CCeeEecCChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccc
Q 019042          204 FDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRI  281 (347)
Q Consensus       204 ~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  281 (347)
                      +++++++.+. ++.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    .....+...++.+++
T Consensus       222 a~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~  296 (358)
T TIGR03451       222 ATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFGRGG  296 (358)
T ss_pred             CceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhhcCC
Confidence            9999998776 788888888876 89999999997 6889999999999999999975321    112244556777889


Q ss_pred             eeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          282 RMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       282 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      ++.++......  ..+.++++++++++|++++  .++++|+++|+.+|++.+.+++.. |+++.
T Consensus       297 ~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       297 ALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             EEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            98887643221  2567899999999999975  578899999999999999888765 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=4.1e-44  Score=298.03  Aligned_cols=341  Identities=72%  Similarity=1.229  Sum_probs=307.2

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      |.+.|+|++.++..|.|..+++.+...++..+.|.++ ++||||..|-+++|+.+.++.......+-+|+.||..+.|.|
T Consensus         1 ~v~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s-~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~G   79 (343)
T KOG1196|consen    1 MVTNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGS-GEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFG   79 (343)
T ss_pred             CccccEEEEeccCCCCCccccceeeeeeecccCCCCC-ccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCc
Confidence            4578999999998899999999998888777778888 999999999999999988777655444667899999888888


Q ss_pred             EEEEecCCCCCCCCCCEEEeccCcceeEeecCCC-cceecc-CCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEE
Q 019042           86 VSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQ-HLIKIL-DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYV  163 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~-~~~~i~-P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI  163 (347)
                      +...+.++.+++++||.|+++-+|.+|.+++... ..++++ |.+.++++-..+|..++.|||.++++.+..++|++|+|
T Consensus        80 V~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~V  159 (343)
T KOG1196|consen   80 VAKVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFV  159 (343)
T ss_pred             eEEEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEE
Confidence            8888889999999999999999999999998653 244541 35667776788999999999999999999999999999


Q ss_pred             EcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHHH
Q 019042          164 SAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAV  243 (347)
Q Consensus       164 ~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~  243 (347)
                      -||+|++|+++.|+|+.+|++|++++.+++|..++++++|.+..|||+++.++.+.+++..++++|+.||++|+..++..
T Consensus       160 SaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDav  239 (343)
T KOG1196|consen  160 SAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAV  239 (343)
T ss_pred             eeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHH
Confidence            99999999999999999999999999999999999988999999999987689999999888899999999999999999


Q ss_pred             HHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeecccc
Q 019042          244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEK  323 (347)
Q Consensus       244 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  323 (347)
                      +..|+..||++.||..+.++...+....+....+.|++++.|+...++...+.+.++.+..++++|+|+...+..-.||.
T Consensus       240 l~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen  319 (343)
T KOG1196|consen  240 LLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLEN  319 (343)
T ss_pred             HHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhc
Confidence            99999999999999999888877877788899999999999988888777888999999999999999998877779999


Q ss_pred             HHHHHHHhHcCCCcceEEEEeCCC
Q 019042          324 APSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       324 ~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      .++||.-+.+|+..||.++.+..|
T Consensus       320 ~P~A~vglf~GkNvGKqiv~va~E  343 (343)
T KOG1196|consen  320 GPSALVGLFHGKNVGKQLVKVARE  343 (343)
T ss_pred             cHHHHHHHhccCcccceEEEeecC
Confidence            999999999999999999998754

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=9.6e-44  Score=323.55  Aligned_cols=328  Identities=36%  Similarity=0.594  Sum_probs=254.5

Q ss_pred             cceEEEeecc--CCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCC--CCCcccCCCCCCceeec
Q 019042            9 NKQVILSNYV--TGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD--KPSFVASFNPGEPLSGY   84 (347)
Q Consensus         9 ~~a~~~~~~~--~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~--~~~~~~p~v~G~e~~g~   84 (347)
                      .|-+++.+.+  .+.|.++.+++++  .|.|+|.++ +||||||+++|||+.|+.......  ....++|.++|||+  +
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~-~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~--~   77 (345)
T cd08293           3 NKRVVLNSRPGKNGNPVAENFRVEE--CTLPDELNE-GQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDG--G   77 (345)
T ss_pred             ceEEEEecccCCCCCCCccceEEEe--ccCCCCCCC-CeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEe--e
Confidence            4667776665  4567667776665  666665346 999999999999999975443211  11234578999994  4


Q ss_pred             eEEEEecCCCCCCCCCCEEEec-cCcceeEeecCCCcceeccCCCCCc---cccccccCCchhhHHHHhhhhcCCCCC--
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL-TSWEEYSLIQSPQHLIKILDTNVPL---SYYTGILGMPGLTAYGGLYELCSPKKG--  158 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~-g~~~~~~~~~~~~~~~~i~P~~~~~---~~~aa~l~~~~~tA~~~l~~~~~~~~~--  158 (347)
                      |+|+++|++++++++||+|+++ ++|++|++++++. ++++ |+++..   ++.+++++.++.|||+++.+.+++++|  
T Consensus        78 G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~-~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~  155 (345)
T cd08293          78 GVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSS-LEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGAN  155 (345)
T ss_pred             EEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHH-eEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCC
Confidence            5999999999999999999988 4799999999999 9999 987422   223567888999999999877788877  


Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      ++|+|+|++|++|++++|+|++.|+ +|+++++++++.+.+++++|+++++++++. ++.+.+++++++++|++|||+|+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid~~g~  234 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGG  234 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEECCCc
Confidence            9999999999999999999999999 899999999999998845999999999876 88888988876689999999999


Q ss_pred             hhHHHHHHhhccCCEEEEEcccccccCCCCc-cccc--hHH-HHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc
Q 019042          238 KMLDAVLLNMRIHGRIAVCGMISQYNLEKPE-GVHN--LMQ-VVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                      ..+..++++++++|+++.+|........... ....  ... ...+++++.+.....++...++.++++.+++++|.+++
T Consensus       235 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~  314 (345)
T cd08293         235 EISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKV  314 (345)
T ss_pred             HHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccc
Confidence            8889999999999999999864321100000 0011  111 22344554444333333344667888999999999988


Q ss_pred             ccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          314 VEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       314 ~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .....++++++++|++.+.+++..||+|+++
T Consensus       315 ~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         315 KETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             eeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            7666679999999999999998899999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=6.4e-44  Score=323.85  Aligned_cols=303  Identities=21%  Similarity=0.226  Sum_probs=252.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++..+       +.++++  ++|.|.| ++ +||+||+.++++|++|++.+.+.+.....+|.++|||  ++|+|+
T Consensus         1 mka~~~~~~-------~~l~~~--~~~~p~~-~~-~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e--~~G~V~   67 (339)
T cd08239           1 MRGAVFPGD-------RTVELR--EFPVPVP-GP-GEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHE--PAGVVV   67 (339)
T ss_pred             CeEEEEecC-------CceEEE--ecCCCCC-CC-CeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccC--ceEEEE
Confidence            589998654       234554  4677766 77 9999999999999999988766432223358999999  556999


Q ss_pred             EecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      ++|++++++++||+|+.+                               |+|++|++++++. ++++ |++++.. ++++
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~-~~~~-P~~~~~~-~aa~  144 (339)
T cd08239          68 AVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKT-LIPL-PDDLSFA-DGAL  144 (339)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHH-eEEC-CCCCCHH-Hhhh
Confidence            999999999999999752                               6799999999998 9999 9995554 6888


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      +++++.|||+++. ..++.+|++|+|+|+ |++|++++|+|+++|++ |+++++++++++.++ ++|+++++++++. + 
T Consensus       145 l~~~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~~-~-  219 (339)
T cd08239         145 LLCGIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQD-D-  219 (339)
T ss_pred             hcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCcc-h-
Confidence            8999999999995 468899999999985 99999999999999998 999999999999998 9999999998775 6 


Q ss_pred             HHHHHHHCCC-CccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccc
Q 019042          217 DAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ  294 (347)
Q Consensus       217 ~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  294 (347)
                      .+.+.+.+++ ++|++|||+|+. .+..++++++++|+++.+|......      ......++.+++++.|+....    
T Consensus       220 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~g~~~~~----  289 (339)
T cd08239         220 VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELT------IEVSNDLIRKQRTLIGSWYFS----  289 (339)
T ss_pred             HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcc------cCcHHHHHhCCCEEEEEecCC----
Confidence            6777777776 899999999985 5688999999999999998753211      111245667899999987654    


Q ss_pred             hHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          295 YPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       295 ~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                       .+.++++++++.+|.+++  .++++|+++++++||+.+.++. .||+||+|
T Consensus       290 -~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         290 -VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             -HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence             467899999999999864  6888999999999999998875 69999976

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.1e-43  Score=321.05  Aligned_cols=320  Identities=41%  Similarity=0.707  Sum_probs=258.7

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      +||+|++.++..|.+.++.+++++  .|.|.| ++ +||+|||+++++|+.|+.....    ...+|.++|+|++  |+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~--~~~p~~-~~-~evlVkv~a~~in~~~~~~~~~----~~~~p~v~G~e~~--G~V   71 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVE--EELPPL-KD-GEVLCEALFLSVDPYMRPYSKR----LNEGDTMIGTQVA--KVI   71 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEe--cCCCCC-CC-CcEEEEEEEEecCHHHhccccc----CCCCCcEecceEE--EEE
Confidence            689999999533445445566655  666766 77 9999999999999988653221    1245889999954  588


Q ss_pred             EEecCCCCCCCCCCEEEeccCcceeEeecCC---CcceeccCCCCC--cc--ccccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           88 KVLDSTHPNYKKDDLVWGLTSWEEYSLIQSP---QHLIKILDTNVP--LS--YYTGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~---~~~~~i~P~~~~--~~--~~aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                      ++   .++++++||+|+++++|++|++++++   . ++++ |++++  +.  ...++++.+++|||+++....++++|++
T Consensus        72 ~~---~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~  146 (329)
T cd08294          72 ES---KNSKFPVGTIVVASFGWRTHTVSDGKDQPD-LYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGET  146 (329)
T ss_pred             ec---CCCCCCCCCEEEeeCCeeeEEEECCccccc-eEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCE
Confidence            74   55689999999999999999999999   8 9999 99965  11  1245789999999999988889999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhH
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKML  240 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~  240 (347)
                      |+|+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++. ++.+.+++.+++++|++||++|++.+
T Consensus       147 vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~~g~~~~  224 (329)
T cd08294         147 VVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFS  224 (329)
T ss_pred             EEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEECCCHHHH
Confidence            999999999999999999999999999999999999999 8999999999876 88888888876689999999999889


Q ss_pred             HHHHHhhccCCEEEEEcccccccCCCCc-cccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceee
Q 019042          241 DAVLLNMRIHGRIAVCGMISQYNLEKPE-GVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       241 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      ..++++++++|+++.+|........... .......+..+++++.++....+.....+.++++++++++|++++....++
T Consensus       225 ~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~  304 (329)
T cd08294         225 STVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTE  304 (329)
T ss_pred             HHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence            9999999999999999864322110000 012234556678888887654433344567889999999999988766778


Q ss_pred             ccccHHHHHHHhHcCCCcceEEEEe
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +++++++|++.+.+++..||+|+++
T Consensus       305 ~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         305 GFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             CHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            9999999999999999999999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=6.6e-44  Score=321.72  Aligned_cols=315  Identities=23%  Similarity=0.275  Sum_probs=259.4

Q ss_pred             cceEEEeeccCCCC-CCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            9 NKQVILSNYVTGFP-KESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         9 ~~a~~~~~~~~~~p-~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      |||++++++  +.| .++  .++..++|.|.| ++ +||+||+.++++|++|++...+.+.....+|.++|||++  |+|
T Consensus         1 m~a~~~~~~--~~~~~~~--~~~~~~~~~p~~-~~-~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~--G~V   72 (324)
T cd08291           1 MKALLLEEY--GKPLEVK--ELSLPEPEVPEP-GP-GEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGS--GTV   72 (324)
T ss_pred             CeEEEEeec--CCCcccc--EEEecccCCCCC-CC-CeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceE--EEE
Confidence            589999988  665 111  355556777766 77 999999999999999998887754333356899999954  599


Q ss_pred             EEecCCCCC-CCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEE
Q 019042           88 KVLDSTHPN-YKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVY  162 (347)
Q Consensus        88 ~~vG~~v~~-~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vl  162 (347)
                      +++|+++++ +++||+|+++    |+|++|++++++. ++++ |++++.. ++++++..+.|||..+ ..... +++.++
T Consensus        73 ~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~-~~~~vl  147 (324)
T cd08291          73 VAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQ-CLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE-EGAKAV  147 (324)
T ss_pred             EEECCCccccCCCCCEEEecCCCCCcchheeeecHHH-eEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-CCCcEE
Confidence            999999996 9999999986    8999999999988 9999 9995554 5777888899998655 44555 455666


Q ss_pred             EE-cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhH
Q 019042          163 VS-AASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKML  240 (347)
Q Consensus       163 I~-ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~  240 (347)
                      |+ +++|++|++++|+|+++|++|+++++++++.+.++ ++|++++++++.. ++.+.+++.+++ ++|++||++|+...
T Consensus       148 v~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~~g~~~~  225 (324)
T cd08291         148 VHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDAVGGGLT  225 (324)
T ss_pred             EEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEECCCcHHH
Confidence            65 78899999999999999999999999999999999 8999999998876 888889888876 89999999999878


Q ss_pred             HHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccccceee
Q 019042          241 DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       241 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      ...+++++++|+++.+|......    ....+....+.+++++.++....+ .....+.++++.++++ +.+++.++++|
T Consensus       226 ~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~  300 (324)
T cd08291         226 GQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRY  300 (324)
T ss_pred             HHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEE
Confidence            88899999999999998754321    111345566778999998887654 2223667889999998 99999999999


Q ss_pred             ccccHHHHHHHhHcCCCcceEEEE
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++|+.+|++.+.+++..||+++.
T Consensus       301 ~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         301 PLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             cHHHHHHHHHHHHhCCCCCeEEeC
Confidence            999999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=8.1e-44  Score=327.43  Aligned_cols=315  Identities=21%  Similarity=0.232  Sum_probs=257.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      .|++|||+++.++  +.+    +.++  ++|.|.| ++ +||+||+.++|+|++|++.+.|.......+|.++|||  ++
T Consensus         7 ~~~~mka~~~~~~--~~~----~~~~--e~~~P~~-~~-~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE--~~   74 (381)
T PLN02740          7 KVITCKAAVAWGP--GEP----LVME--EIRVDPP-QK-MEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHE--AA   74 (381)
T ss_pred             cceeeEEEEEecC--CCC----cEEE--EeeCCCC-CC-CeEEEEEEEEecChhhHHHhCCCCcccCCCCcccccc--ce
Confidence            3678999999877  544    4554  4666765 77 9999999999999999998887543334568999999  55


Q ss_pred             eEEEEecCCCCCCCCCCEEEe------------------------------------------------------ccCcc
Q 019042           85 GVSKVLDSTHPNYKKDDLVWG------------------------------------------------------LTSWE  110 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~------------------------------------------------------~g~~~  110 (347)
                      |+|+++|++++++++||+|++                                                      .|+|+
T Consensus        75 G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~a  154 (381)
T PLN02740         75 GIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFT  154 (381)
T ss_pred             EEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccce
Confidence            699999999999999999985                                                      26899


Q ss_pred             eeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEe
Q 019042          111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSA  189 (347)
Q Consensus       111 ~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~  189 (347)
                      ||++++.+. ++++ |++++.. +++.+++.+.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++
T Consensus       155 ey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~  230 (381)
T PLN02740        155 EYTVLDSAC-VVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVD  230 (381)
T ss_pred             eEEEEehHH-eEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEc
Confidence            999999998 9999 9995554 578888999999999877789999999999995 9999999999999999 699999


Q ss_pred             CCHHHHHHHHHHhCCCeeEecCCh-hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCC
Q 019042          190 GSKEKVNLLKNKFGFDDAFNYKKE-PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEK  266 (347)
Q Consensus       190 ~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  266 (347)
                      +++++++.++ ++|+++++|+.+. .++.+.+++++++++|++||++|. ..+..++++++++ |+++.+|.....    
T Consensus       231 ~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----  305 (381)
T PLN02740        231 INPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----  305 (381)
T ss_pred             CChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----
Confidence            9999999999 9999999987753 147788888876689999999997 6889999999996 999999975421    


Q ss_pred             CccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          267 PEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ....+....+ .+++++.|+....+..  ...++++++++.+|.+++  .++++|+++|+++|++.+.+++. .|++|+.
T Consensus       306 ~~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        306 KMLPLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             ceecccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence            0011122223 3678898887655422  356899999999998864  58889999999999999988765 4998863

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.9e-44  Score=298.15  Aligned_cols=313  Identities=21%  Similarity=0.246  Sum_probs=266.6

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      .++++||.+..++  +.|    +.+++.+++   |++. +||+||+.++++|.+|...+.+.. +...+|.++|||  ++
T Consensus         4 kvI~CKAAV~w~a--~~P----L~IEei~V~---pPka-~EVRIKI~~t~vCHTD~~~~~g~~-~~~~fP~IlGHE--aa   70 (375)
T KOG0022|consen    4 KVITCKAAVAWEA--GKP----LVIEEIEVA---PPKA-HEVRIKILATGVCHTDAYVWSGKD-PEGLFPVILGHE--AA   70 (375)
T ss_pred             CceEEeEeeeccC--CCC----eeEEEEEeC---CCCC-ceEEEEEEEEeeccccceeecCCC-ccccCceEeccc--ce
Confidence            3678999999999  999    677776665   3377 999999999999999999999865 456779999999  77


Q ss_pred             eEEEEecCCCCCCCCCCEEEec----------------------------------------------------cCccee
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL----------------------------------------------------TSWEEY  112 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~----------------------------------------------------g~~~~~  112 (347)
                      |+|+.+|++|+.+++||+|+++                                                    .+|+||
T Consensus        71 GIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEY  150 (375)
T KOG0022|consen   71 GIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEY  150 (375)
T ss_pred             eEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeE
Confidence            8999999999999999999843                                                    278999


Q ss_pred             EeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC
Q 019042          113 SLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGS  191 (347)
Q Consensus       113 ~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~  191 (347)
                      .+++... +.|| +...+++ ..+.|.+...|+|.+..+.+++++|+++.|+| .|++|++++|-||+.|| ++|+++-+
T Consensus       151 TVv~~~~-v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN  226 (375)
T KOG0022|consen  151 TVVDDIS-VAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDIN  226 (375)
T ss_pred             EEeecce-eEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecC
Confidence            9999999 9999 6665555 68889999999999999999999999999999 69999999999999999 99999999


Q ss_pred             HHHHHHHHHHhCCCeeEecCChh-hHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCc
Q 019042          192 KEKVNLLKNKFGFDDAFNYKKEP-DLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPE  268 (347)
Q Consensus       192 ~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~  268 (347)
                      ++|++.++ +||+.+.+|..+.. ...+.+.+.|++++|+-|||+|. +.+++++.+...+ |.-|.+|.....    ..
T Consensus       227 ~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~----~~  301 (375)
T KOG0022|consen  227 PDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG----QE  301 (375)
T ss_pred             HHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC----cc
Confidence            99999999 99999999987422 37788999999999999999999 7999999999998 999999975432    11


Q ss_pred             cccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          269 GVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      .....+.++ .+.++.|+..+-|..  +.++..+.+...++++.  ..+++.+||+++++||+.+.+++.. |-|+.
T Consensus       302 i~~~p~~l~-~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  302 ISTRPFQLV-TGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             cccchhhhc-cccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            223333333 477788888777644  67788888888888876  5689999999999999999999987 66664

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-43  Score=319.79  Aligned_cols=302  Identities=16%  Similarity=0.139  Sum_probs=245.1

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCC-CC-CCcccCCCCCCcee
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL-DK-PSFVASFNPGEPLS   82 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~-~~-~~~~~p~v~G~e~~   82 (347)
                      |..++|+++++.+       +++++++  .|.| + ++ +||||||+++|+|++|++.+.+. .. ....+|.++|||  
T Consensus         1 ~~~~~~~~~~~~~-------~~~~~~~--~~~p-~-~~-~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE--   66 (343)
T PRK09880          1 MQVKTQSCVVAGK-------KDVAVTE--QEIE-W-NN-NGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHE--   66 (343)
T ss_pred             CcccceEEEEecC-------CceEEEe--cCCC-C-CC-CeEEEEEEEEEECccccHhhccCCcccccccCCcccCcc--
Confidence            4567899999765       3345654  5554 4 66 99999999999999999876532 21 123568999999  


Q ss_pred             eceEEEEecCCCCCCCCCCEEEe-----------------------------------ccCcceeEeecCCCcceeccCC
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWG-----------------------------------LTSWEEYSLIQSPQHLIKILDT  127 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~-----------------------------------~g~~~~~~~~~~~~~~~~i~P~  127 (347)
                      ++|+|+++  ++++|++||+|+.                                   .|+|+||++++++. ++++ |+
T Consensus        67 ~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~~-P~  142 (343)
T PRK09880         67 VIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQ-CIPY-PE  142 (343)
T ss_pred             cEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHH-eEEC-CC
Confidence            55699999  7889999999973                                   27899999999999 9999 99


Q ss_pred             CCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCe
Q 019042          128 NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDD  206 (347)
Q Consensus       128 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~  206 (347)
                      +++.  +.+++..++.+||+++.+ ....+|++|+|+|+ |++|++++|+|+++|+ +|+++++++++++.++ ++|+++
T Consensus       143 ~l~~--~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~  217 (343)
T PRK09880        143 KADE--KVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADK  217 (343)
T ss_pred             CCCH--HHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcE
Confidence            9544  455677888999999965 46678999999995 9999999999999999 6999999999999999 899999


Q ss_pred             eEecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeee
Q 019042          207 AFNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEG  285 (347)
Q Consensus       207 vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  285 (347)
                      ++|+++. ++.+.. +. .+++|++|||+|+ ..+..++++++++|+++.+|....      ...++...++.+++++.|
T Consensus       218 vi~~~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g  288 (343)
T PRK09880        218 LVNPQND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLKG  288 (343)
T ss_pred             EecCCcc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEEE
Confidence            9998775 554322 21 2369999999998 578999999999999999997432      123456667788999988


Q ss_pred             eEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          286 FLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +...      .+.++++++++++|++++  .++++|+++|+++|++.+.++...||+++.+
T Consensus       289 ~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        289 SFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             Eeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            7643      356899999999999975  5788999999999999999888789999874

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=6.4e-43  Score=315.40  Aligned_cols=318  Identities=42%  Similarity=0.679  Sum_probs=254.5

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      |.|++.+.+.+.|+|+.+++.+  .|.|.| ++ +||||||.++++|+.++.....    ....|.++|+|++  |+|++
T Consensus         2 ~~~~~~~~~~~~~~~~~l~~~~--~~~p~~-~~-~evlv~v~a~~~n~~~~~g~~~----~~~~~~i~G~~~~--g~v~~   71 (325)
T TIGR02825         2 KTWTLKKHFVGYPTDSDFELKT--VELPPL-NN-GEVLLEALFLSVDPYMRVAAKR----LKEGDTMMGQQVA--RVVES   71 (325)
T ss_pred             cEEEEecCCCCCCCCCceEEEe--ccCCCC-CC-CcEEEEEEEEecCHHHhcccCc----CCCCCcEecceEE--EEEEe
Confidence            6788888887888888887776  566766 77 9999999999999987654322    1234789999955  59998


Q ss_pred             ecCCCCCCCCCCEEEeccCcceeEeecCCCcceecc---CCCCCccccc-cccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           90 LDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKIL---DTNVPLSYYT-GILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        90 vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~---P~~~~~~~~a-a~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      +|+   .+++||+|+++++|++|++++.+. +.++.   |++++.. ++ +++++++.|||+++.+..++++|++|+|+|
T Consensus        72 ~~~---~~~~GdrV~~~~~~~~~~~~~~~~-~~~l~~~~p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~g  146 (325)
T TIGR02825        72 KNV---ALPKGTIVLASPGWTSHSISDGKD-LEKLLTEWPDTLPLS-LALGTVGMPGLTAYFGLLEICGVKGGETVMVNA  146 (325)
T ss_pred             CCC---CCCCCCEEEEecCceeeEEechhh-eEEccccccCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeC
Confidence            763   699999999999999999999877 55441   6664433 44 679999999999998888999999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL  245 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~  245 (347)
                      ++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++.+++.+.++..+++++|++|||+|+..+..+++
T Consensus       147 a~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~  225 (325)
T TIGR02825       147 AAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIG  225 (325)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHH
Confidence            9999999999999999999999999999999998 899999999876325666666666558999999999988899999


Q ss_pred             hhccCCEEEEEcccccccCCCCccc-cchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccccceeecccc
Q 019042          246 NMRIHGRIAVCGMISQYNLEKPEGV-HNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEK  323 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  323 (347)
                      +++++|+++.+|............. .....++.+++++.++....+ .+...+.++++++++++|++++.+..+|++++
T Consensus       226 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~  305 (325)
T TIGR02825       226 QMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFEN  305 (325)
T ss_pred             HhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHH
Confidence            9999999999987542110001111 123345567788888765443 23345678999999999999988777889999


Q ss_pred             HHHHHHHhHcCCCcceEEEE
Q 019042          324 APSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       324 ~~~a~~~~~~~~~~gkivi~  343 (347)
                      +.+|++.+.+++..||+|++
T Consensus       306 ~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       306 MPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHHHHhcCCCCCeEEeC
Confidence            99999999999999999973

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.3e-43  Score=291.76  Aligned_cols=324  Identities=21%  Similarity=0.297  Sum_probs=269.9

Q ss_pred             cccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCcee
Q 019042            3 GEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLS   82 (347)
Q Consensus         3 ~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~   82 (347)
                      ..|+...|+++|.++  |.|. +.++++.  +++|.+++  +||+||..++.|||+|+..++|.+...++.|.+-|.|  
T Consensus        14 ~q~~~~~kalvY~~h--gdP~-kVlql~~--~~~p~~~~--s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnE--   84 (354)
T KOG0025|consen   14 SQMPARSKALVYSEH--GDPA-KVLQLKN--LELPAVPG--SDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNE--   84 (354)
T ss_pred             cccccccceeeeccc--CCch-hhheeec--ccCCCCCC--CceeeeeeecCCChHHhhhhccccCCCCCCCcccCCc--
Confidence            456778999999999  9886 6666666  44455534  7799999999999999999999998888889999999  


Q ss_pred             eceEEEEecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCC
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKG  158 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~  158 (347)
                      |+|.|+.+|+++++|++||+|+..    |.|++|.+.+++. ++++ ++.+++. .||++..+.+|||..|.+.-++.+|
T Consensus        85 Gv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~-Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~G  161 (354)
T KOG0025|consen   85 GVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESD-LIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNKG  161 (354)
T ss_pred             ceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccc-eEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCCC
Confidence            999999999999999999999976    8999999999999 9999 8887776 6999999999999999999999999


Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHH-CCC-CccEEEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRC-FPE-GIDIYFE  233 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~-~~~-~~d~vid  233 (347)
                      |+|+-.||.+++|++.+|+|+++|.+.+-++|+....+.+++   .+||++||...+.  ........ ... ++.+.|+
T Consensus       162 D~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel--~~~~~~k~~~~~~~prLalN  239 (354)
T KOG0025|consen  162 DSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL--RDRKMKKFKGDNPRPRLALN  239 (354)
T ss_pred             CeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh--cchhhhhhhccCCCceEEEe
Confidence            999999999999999999999999999999987665444432   6899999865431  11222222 122 7899999


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc------ccchHHHHHHHHHHHH
Q 019042          234 NVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF------YHQYPKFLELVMPAIK  307 (347)
Q Consensus       234 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~  307 (347)
                      |+|+.......+.|..||.++.+|..+..+.     ......++.|++++.|+++..|      ++...+.++++.++..
T Consensus       240 cVGGksa~~iar~L~~GgtmvTYGGMSkqPv-----~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~  314 (354)
T KOG0025|consen  240 CVGGKSATEIARYLERGGTMVTYGGMSKQPV-----TVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYR  314 (354)
T ss_pred             ccCchhHHHHHHHHhcCceEEEecCccCCCc-----ccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHH
Confidence            9999888889999999999999998775433     4566778889999999999998      3344567899999999


Q ss_pred             cCCcccccceeeccccHHHHHHHhHcCC-CcceEEEEeC
Q 019042          308 EGKLVYVEDIAEGLEKAPSALVGIFTGQ-NVGKQLVVVA  345 (347)
Q Consensus       308 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkivi~~~  345 (347)
                      .|+|+.+.....+|++...|++...+.. ..||-++.+.
T Consensus       315 ~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  315 RGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             cCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence            9999999888889999999998766543 3356666553

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.7e-43  Score=319.09  Aligned_cols=304  Identities=14%  Similarity=0.150  Sum_probs=244.5

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      ||+++++...+.  ..+      ++..++|.|.| ++ +||+||+.++|+|++|++.+.+.+. ...+|.++|||++  |
T Consensus        10 ~~~~~~~~~~~~--~~~------l~~~~~~~p~~-~~-~eVlV~v~~~gic~sD~~~~~g~~~-~~~~p~i~GhE~~--G   76 (360)
T PLN02586         10 PQKAFGWAARDP--SGV------LSPFHFSRREN-GD-EDVTVKILYCGVCHSDLHTIKNEWG-FTRYPIVPGHEIV--G   76 (360)
T ss_pred             hhheeEEEecCC--CCC------ceEEeecCCCC-CC-CeEEEEEEEecCChhhHhhhcCCcC-CCCCCccCCccee--E
Confidence            566666666544  222      34445677766 77 9999999999999999988876432 2356899999955  5


Q ss_pred             EEEEecCCCCCCCCCCEEEe--------------------------------------ccCcceeEeecCCCcceeccCC
Q 019042           86 VSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEYSLIQSPQHLIKILDT  127 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~~~~~~~~~~i~P~  127 (347)
                      +|+++|++++++++||+|+.                                      .|+|+||++++++. ++++ |+
T Consensus        77 ~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~  154 (360)
T PLN02586         77 IVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHF-VLRF-PD  154 (360)
T ss_pred             EEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHH-eeeC-CC
Confidence            99999999999999999973                                      27899999999998 9999 99


Q ss_pred             CCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhCCCe
Q 019042          128 NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV-NLLKNKFGFDD  206 (347)
Q Consensus       128 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~-~~~~~~~g~~~  206 (347)
                      +++.. +++++++.+.|||+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.++++. +.++ ++|+++
T Consensus       155 ~ls~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~Ga~~  231 (360)
T PLN02586        155 NLPLD-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RLGADS  231 (360)
T ss_pred             CCCHH-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hCCCcE
Confidence            96554 688999999999999876666789999999885 9999999999999999999888776654 4455 899999


Q ss_pred             eEecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeee
Q 019042          207 AFNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEG  285 (347)
Q Consensus       207 vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  285 (347)
                      ++++.+.    +.+++.++ ++|++||++|. ..+..++++++++|+++.+|....      ....+...++.++..+.+
T Consensus       232 vi~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g  300 (360)
T PLN02586        232 FLVSTDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRKLVGG  300 (360)
T ss_pred             EEcCCCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCeEEEE
Confidence            9887653    24444443 59999999997 578999999999999999986431      122345556667777777


Q ss_pred             eEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          286 FLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +....     .+.++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+.+
T Consensus       301 ~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        301 SDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             cCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            76544     46789999999999999876 4799999999999999998889999986

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=9.3e-43  Score=319.58  Aligned_cols=309  Identities=18%  Similarity=0.204  Sum_probs=254.8

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceE
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~   86 (347)
                      ..|||+++.++  +.    .++++  ++|.|.| ++ +||+|||.++|+|++|++.+.+.    ..+|.++|||  ++|+
T Consensus        11 ~~mka~~~~~~--~~----~~~~~--e~~~P~~-~~-~eVlVkv~~~gic~sD~~~~~g~----~~~p~i~GhE--~~G~   74 (378)
T PLN02827         11 ITCRAAVAWGA--GE----ALVME--EVEVSPP-QP-LEIRIKVVSTSLCRSDLSAWESQ----ALFPRIFGHE--ASGI   74 (378)
T ss_pred             ceeEEEEEecC--CC----CceEE--EeecCCC-CC-CEEEEEEEEEecChhHHHHhcCC----CCCCeeeccc--ceEE
Confidence            46899999765  32    24454  4666766 77 99999999999999999877653    2458899999  5569


Q ss_pred             EEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeEee
Q 019042           87 SKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYSLI  115 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~~  115 (347)
                      |+++|++++++++||+|+++                                                   |+|++|+++
T Consensus        75 V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v  154 (378)
T PLN02827         75 VESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVV  154 (378)
T ss_pred             EEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEe
Confidence            99999999999999999863                                                   689999999


Q ss_pred             cCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHH
Q 019042          116 QSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEK  194 (347)
Q Consensus       116 ~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~  194 (347)
                      +++. ++++ |++++.. +++.+++.+.++|+++....++++|++|+|+|+ |++|++++|+|++.|+ .|+++++++++
T Consensus       155 ~~~~-~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~  230 (378)
T PLN02827        155 HSGC-AVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEK  230 (378)
T ss_pred             chhh-eEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence            9998 9999 9995554 577888888999988767788999999999985 9999999999999999 58888889999


Q ss_pred             HHHHHHHhCCCeeEecCCh-hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCcccc
Q 019042          195 VNLLKNKFGFDDAFNYKKE-PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPEGVH  271 (347)
Q Consensus       195 ~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~  271 (347)
                      .++++ ++|+++++++++. +++.+.+++++++++|++|||+|. ..+..+++.++++ |+++.+|.+...      ...
T Consensus       231 ~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~------~~~  303 (378)
T PLN02827        231 AEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK------PEV  303 (378)
T ss_pred             HHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC------ccc
Confidence            99998 9999999988641 267778888876689999999998 4789999999998 999999975421      111


Q ss_pred             ch-HHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          272 NL-MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       272 ~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      +. ..++.+++++.|+....+.  ....++++++++++|++++  .++++|+|+|+.+|++.+.+++. +|+||.+.
T Consensus       304 ~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        304 SAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             cccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence            22 3466789999998765432  1456888999999999987  78899999999999999998876 69999875

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=9.5e-43  Score=319.48  Aligned_cols=311  Identities=18%  Similarity=0.208  Sum_probs=254.3

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceE
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~   86 (347)
                      |+|||+++.++  +.+    +++++  +|.|.| ++ +||+||+.++++|++|++.+.+... ...+|.++|||  ++|+
T Consensus         1 ~~~ka~~~~~~--~~~----~~l~~--~~~p~~-~~-~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e--~~G~   67 (369)
T cd08301           1 ITCKAAVAWEA--GKP----LVIEE--VEVAPP-QA-MEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHE--AAGI   67 (369)
T ss_pred             CccEEEEEecC--CCC----cEEEE--eeCCCC-CC-CeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccc--cceE
Confidence            47899999887  544    45655  566655 77 9999999999999999988877542 24568999999  5569


Q ss_pred             EEEecCCCCCCCCCCEEEec----------------------------------------------------cCcceeEe
Q 019042           87 SKVLDSTHPNYKKDDLVWGL----------------------------------------------------TSWEEYSL  114 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~----------------------------------------------------g~~~~~~~  114 (347)
                      |+++|++++++++||+|+.+                                                    |+|+||++
T Consensus        68 V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~  147 (369)
T cd08301          68 VESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTV  147 (369)
T ss_pred             EEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEE
Confidence            99999999999999999863                                                    57999999


Q ss_pred             ecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Q 019042          115 IQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKE  193 (347)
Q Consensus       115 ~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~  193 (347)
                      +++.. ++++ |++++.. +++.+++.+.|||+++....++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++
T Consensus       148 v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~  223 (369)
T cd08301         148 VHVGC-VAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPS  223 (369)
T ss_pred             Eeccc-EEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence            99999 9999 9996554 578888899999999877789999999999985 9999999999999999 8999999999


Q ss_pred             HHHHHHHHhCCCeeEecCCh-hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCccc
Q 019042          194 KVNLLKNKFGFDDAFNYKKE-PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPEGV  270 (347)
Q Consensus       194 ~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~  270 (347)
                      +++.++ ++|++.++++.+. +++.+.+++++++++|++|||+|. ..+..++++++++ |+++.+|.....    ....
T Consensus       224 ~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~  298 (369)
T cd08301         224 KFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFS  298 (369)
T ss_pred             HHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccc
Confidence            999998 9999988887652 157777888776689999999987 4788899999996 999999986421    0111


Q ss_pred             cchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          271 HNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       271 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      .....+ .+++++.|+....+.  .+..++++++++.+|.++.  .++++|+++|+++||+.+.+++.. |++|.
T Consensus       299 ~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  369 (369)
T cd08301         299 THPMNL-LNGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCILH  369 (369)
T ss_pred             cCHHHH-hcCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEeC
Confidence            222223 368899988765542  2457889999999998764  478899999999999999988865 88873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.1e-42  Score=316.25  Aligned_cols=307  Identities=15%  Similarity=0.148  Sum_probs=249.4

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      |..++||+.+...  +.++    .++..+++.|.| ++ +||+|||.++|+|++|++...|.+. ...+|.++|||++  
T Consensus         1 ~~~~~~a~~~~~~--~~~~----~l~~~~~~~p~~-~~-~eVlVkV~a~gic~sD~~~~~G~~~-~~~~p~i~GhE~a--   69 (375)
T PLN02178          1 MVDQNKAFGWAAN--DESG----VLSPFHFSRREN-GE-NDVTVKILFCGVCHSDLHTIKNHWG-FSRYPIIPGHEIV--   69 (375)
T ss_pred             CcccceeEEEEEc--cCCC----CceEEeecCCCC-CC-CeEEEEEEEEcCchHHHHHhcCCCC-CCCCCcccCceee--
Confidence            4456788888877  5553    244445677766 77 9999999999999999998877432 1245899999955  


Q ss_pred             eEEEEecCCCCCCCCCCEEEe--------------------------------------ccCcceeEeecCCCcceeccC
Q 019042           85 GVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEYSLIQSPQHLIKILD  126 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~~~~~~~~~~i~P  126 (347)
                      |+|+++|++++++++||+|+.                                      .|+|+||++++++. ++++ |
T Consensus        70 G~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P  147 (375)
T PLN02178         70 GIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF-VLSI-P  147 (375)
T ss_pred             EEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH-eEEC-C
Confidence            599999999999999999973                                      26899999999998 9999 9


Q ss_pred             CCCCccccccccCCchhhHHHHhhhhcC-CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHhCC
Q 019042          127 TNVPLSYYTGILGMPGLTAYGGLYELCS-PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-VNLLKNKFGF  204 (347)
Q Consensus       127 ~~~~~~~~aa~l~~~~~tA~~~l~~~~~-~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-~~~~~~~~g~  204 (347)
                      ++++.. +++++++.+.|||+++..... .++|++|+|.|+ |++|++++|+|+++|++|++++.++++ .+.++ ++|+
T Consensus       148 ~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lGa  224 (375)
T PLN02178        148 DGLPSD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLGA  224 (375)
T ss_pred             CCCCHH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCCC
Confidence            995554 588899999999999855432 368999999985 999999999999999999999877554 67777 9999


Q ss_pred             CeeEecCChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhcccee
Q 019042          205 DDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRM  283 (347)
Q Consensus       205 ~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                      ++++++.+.    +.+.+.++ ++|++|||+|.. .+..++++++++|+++.+|....      ....+...++.+++++
T Consensus       225 ~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i  293 (375)
T PLN02178        225 DSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGRKMV  293 (375)
T ss_pred             cEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCCeEE
Confidence            999887642    34445443 699999999985 78999999999999999987532      1234556677789999


Q ss_pred             eeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          284 EGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       284 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .|+....     .+.++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+.+
T Consensus       294 ~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        294 GGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             EEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            9887654     46789999999999999877 5699999999999999999889999987

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.5e-42  Score=316.14  Aligned_cols=310  Identities=20%  Similarity=0.233  Sum_probs=248.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++...  +.+    ++++  ++|.|.| ++ +||+||+.++|+|++|++...+.+. ...+|.++|||++  |+|+
T Consensus         2 ~~a~~~~~~--~~~----l~~~--~~~~P~~-~~-~eVlI~v~a~gi~~sD~~~~~g~~~-~~~~p~i~GhE~~--G~V~   68 (368)
T TIGR02818         2 SRAAVAWAA--GQP----LKIE--EVDVEMP-QK-GEVLVRIVATGVCHTDAFTLSGADP-EGVFPVILGHEGA--GIVE   68 (368)
T ss_pred             ceEEEEecC--CCC----eEEE--EecCCCC-CC-CeEEEEEEEecccHHHHHHhcCCCC-CCCCCeeeccccE--EEEE
Confidence            689998776  443    4454  5677766 77 9999999999999999988877542 2346899999955  5999


Q ss_pred             EecCCCCCCCCCCEEEec---------------------------------------------------cCcceeEeecC
Q 019042           89 VLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYSLIQS  117 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~~~~  117 (347)
                      ++|++++++++||+|+++                                                   |+|+||+++++
T Consensus        69 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~  148 (368)
T TIGR02818        69 AVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPE  148 (368)
T ss_pred             EECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEech
Confidence            999999999999999753                                                   48999999999


Q ss_pred             CCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Q 019042          118 PQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVN  196 (347)
Q Consensus       118 ~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~  196 (347)
                      +. ++++ |++++.. +++++++++.|||+++.+..++++|++|+|+|+ |++|++++|+|+++|+ +|+++++++++++
T Consensus       149 ~~-~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~  224 (368)
T TIGR02818       149 IS-LAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFE  224 (368)
T ss_pred             hh-eEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            99 9999 9995554 588889999999999877789999999999985 9999999999999999 8999999999999


Q ss_pred             HHHHHhCCCeeEecCCh-hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCccccch
Q 019042          197 LLKNKFGFDDAFNYKKE-PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPEGVHNL  273 (347)
Q Consensus       197 ~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~  273 (347)
                      .++ ++|+++++|+.+. .++.+.+++++++++|++|||+|. ..+..++++++++ |+++.+|.....    .....+.
T Consensus       225 ~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~  299 (368)
T TIGR02818       225 LAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRP  299 (368)
T ss_pred             HHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccH
Confidence            998 9999999987641 156777888776689999999997 5789999999886 999999975321    0111122


Q ss_pred             HHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          274 MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       274 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ..++ ++..+.++.....  ..+..++++++++++|+++  +.++++|+|+|+++|++.+.+++. .|++|.+
T Consensus       300 ~~~~-~~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       300 FQLV-TGRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             HHHh-ccceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            2333 2344566544321  1245789999999999885  458899999999999999987764 6999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=8.2e-42  Score=312.98  Aligned_cols=311  Identities=23%  Similarity=0.266  Sum_probs=250.9

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceE
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~   86 (347)
                      ++|||+++.+.  +++    ++++  ++|.|.| ++ +||+||+.++|+|++|.+...+... ...+|.++|||+  +|+
T Consensus         1 ~~~~a~~~~~~--~~~----~~~~--~~~~P~~-~~-~eVlIrv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~--~G~   67 (368)
T cd08300           1 ITCKAAVAWEA--GKP----LSIE--EVEVAPP-KA-GEVRIKILATGVCHTDAYTLSGADP-EGLFPVILGHEG--AGI   67 (368)
T ss_pred             CcceEEEEecC--CCC----cEEE--EeecCCC-CC-CEEEEEEEEEEechhhHHHhcCCCc-cCCCCceeccce--eEE
Confidence            36899998776  444    4555  4677766 77 9999999999999999988776542 235689999994  459


Q ss_pred             EEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeEee
Q 019042           87 SKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYSLI  115 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~~  115 (347)
                      |+++|++++++++||+|++.                                                   |+|+||+.+
T Consensus        68 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v  147 (368)
T cd08300          68 VESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVV  147 (368)
T ss_pred             EEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEE
Confidence            99999999999999999853                                                   479999999


Q ss_pred             cCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHH
Q 019042          116 QSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEK  194 (347)
Q Consensus       116 ~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~  194 (347)
                      +++. ++++ |++++.. +++.+++++.|||+++.+...+++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus       148 ~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~  223 (368)
T cd08300         148 AEIS-VAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDK  223 (368)
T ss_pred             chhc-eEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence            9998 9999 9996554 588888899999999877788999999999985 9999999999999999 79999999999


Q ss_pred             HHHHHHHhCCCeeEecCChh-hHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCcccc
Q 019042          195 VNLLKNKFGFDDAFNYKKEP-DLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPEGVH  271 (347)
Q Consensus       195 ~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~  271 (347)
                      ++.++ ++|+++++|+++.+ ++.+.+.+++++++|++|||+|+ ..+..++++++++ |+++.+|.....    .....
T Consensus       224 ~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~  298 (368)
T cd08300         224 FELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEIST  298 (368)
T ss_pred             HHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----Ccccc
Confidence            99998 99999999887531 47788888887789999999997 5889999999886 999999875321    00111


Q ss_pred             chHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          272 NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       272 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +...+. ++..+.++....+.  ..+.++++++++.+|++++  .++++|+|+|+++||+.+.+++. .|++++
T Consensus       299 ~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         299 RPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             CHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            222222 33456666554432  2567889999999999975  48899999999999999988765 488874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=8.3e-42  Score=307.87  Aligned_cols=296  Identities=14%  Similarity=0.071  Sum_probs=243.6

Q ss_pred             eEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEe
Q 019042           11 QVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVL   90 (347)
Q Consensus        11 a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~v   90 (347)
                      |+.+.++  |.|+...++++  ++|.|.| ++ +||+||+.++|+|++|.+...|.+. ...+|.++|||  ++|+|+++
T Consensus         1 ~~~~~~~--g~~~~~~l~~~--~~p~P~~-~~-~evlVkv~~~gi~~~D~~~~~g~~~-~~~~p~i~G~e--~~G~V~~v   71 (329)
T TIGR02822         1 AWEVERP--GPIEDGPLRFV--ERPVPRP-GP-GELLVRVRACGVCRTDLHVSEGDLP-VHRPRVTPGHE--VVGEVAGR   71 (329)
T ss_pred             CeeeecC--CcCCCCCceEE--eCCCCCC-CC-CeEEEEEEEEeecchhHHHHcCCCC-CCCCCccCCcc--eEEEEEEE
Confidence            4666676  66643455555  4777766 77 9999999999999999988877542 22357899999  45599999


Q ss_pred             cCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccccC
Q 019042           91 DSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILG  139 (347)
Q Consensus        91 G~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~  139 (347)
                      |++++++++||+|+.                               .|+|++|+.+++.. ++++ |++++.. ++++++
T Consensus        72 G~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~~~~~-~aa~l~  148 (329)
T TIGR02822        72 GADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAF-AYRL-PTGYDDV-ELAPLL  148 (329)
T ss_pred             CCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEecccc-EEEC-CCCCCHH-HhHHHh
Confidence            999999999999973                               27899999999998 9999 9996554 588899


Q ss_pred             CchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHH
Q 019042          140 MPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAA  219 (347)
Q Consensus       140 ~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  219 (347)
                      +.+.|||+++. ..++++|++|+|+|+ |++|++++|+|+..|++|++++++++++++++ ++|+++++|+.+. +    
T Consensus       149 ~~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~-~----  220 (329)
T TIGR02822       149 CAGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYDT-P----  220 (329)
T ss_pred             ccchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecccccc-C----
Confidence            99999999995 578999999999996 99999999999999999999999999999999 9999998875432 1    


Q ss_pred             HHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHH
Q 019042          220 LKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF  298 (347)
Q Consensus       220 i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  298 (347)
                           .+++|+++++.+. ..+..++++++++|+++.+|.....     ...++...++.+++++.++....     ++.
T Consensus       221 -----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~  285 (329)
T TIGR02822       221 -----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFYERQIRSVTSNT-----RAD  285 (329)
T ss_pred             -----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhCCcEEEEeecCC-----HHH
Confidence                 1258988888765 6899999999999999999974321     11234555667888888876543     567


Q ss_pred             HHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          299 LELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       299 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +.++++++++|++++ ++++|+|+|+++|++.+.+++..||+||
T Consensus       286 ~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       286 AREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            888999999999975 5788999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.3e-41  Score=308.54  Aligned_cols=305  Identities=17%  Similarity=0.142  Sum_probs=250.6

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      +++|++++++  +++      ++..+++.|.| ++ +||+||+.++++|++|++.+.+... ...+|.++|||+  +|+|
T Consensus         9 ~~~~~~~~~~--~~~------~~~~~~~~p~~-~~-~eVlVrv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~E~--~G~V   75 (357)
T PLN02514          9 KTTGWAARDP--SGH------LSPYTYTLRKT-GP-EDVVIKVIYCGICHTDLHQIKNDLG-MSNYPMVPGHEV--VGEV   75 (357)
T ss_pred             eEEEEEEecC--CCC------ceEEeecCCCC-CC-CcEEEEEEEeccChHHHHhhcCCcC-cCCCCccCCcee--eEEE
Confidence            4899999888  544      44444667766 77 9999999999999999988876432 234589999995  4599


Q ss_pred             EEecCCCCCCCCCCEEEe--------------------------------------ccCcceeEeecCCCcceeccCCCC
Q 019042           88 KVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEYSLIQSPQHLIKILDTNV  129 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~~~~~~~~~~i~P~~~  129 (347)
                      +++|++++++++||+|+.                                      .|+|++|++++... ++++ |+++
T Consensus        76 v~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~  153 (357)
T PLN02514         76 VEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKF-VVKI-PEGM  153 (357)
T ss_pred             EEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHH-eEEC-CCCC
Confidence            999999999999999963                                      27899999999988 9999 9996


Q ss_pred             CccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEe
Q 019042          130 PLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFN  209 (347)
Q Consensus       130 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~  209 (347)
                      +.. +++++++.+.|||+++......++|++|+|+| +|++|++++|+|++.|++|+++++++++++.+.+++|++++++
T Consensus       154 ~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~  231 (357)
T PLN02514        154 APE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLV  231 (357)
T ss_pred             CHH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEec
Confidence            554 68889999999999997766668999999997 5999999999999999999999988887766654799988777


Q ss_pred             cCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEe
Q 019042          210 YKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLA  288 (347)
Q Consensus       210 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  288 (347)
                      +.+.    ..+.+.+. ++|++|||+|. ..+..++++++++|+++.+|.....      ..++...++.+++++.|+..
T Consensus       232 ~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~  300 (357)
T PLN02514        232 SSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP------LQFVTPMLMLGRKVITGSFI  300 (357)
T ss_pred             CCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC------CcccHHHHhhCCcEEEEEec
Confidence            6542    23444443 59999999996 5889999999999999999975321      13455567778999999876


Q ss_pred             cccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          289 GDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      ..     ...++++++++++|++++.+ .+|+++|+.+||+.+.+++..||+++.++.
T Consensus       301 ~~-----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        301 GS-----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             CC-----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            55     46789999999999998776 479999999999999999988999998864

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.1e-41  Score=309.96  Aligned_cols=309  Identities=20%  Similarity=0.254  Sum_probs=250.9

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceE
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~   86 (347)
                      |++||+++.+.  +.+    +++++  +|.|.+ ++ +||+||+.++++|++|++.+.+...  ..+|.++|||  ++|+
T Consensus         1 ~~~ka~~~~~~--~~~----~~~~~--~~~p~~-~~-~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e--~~G~   66 (365)
T cd08277           1 IKCKAAVAWEA--GKP----LVIEE--IEVAPP-KA-NEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHE--GAGI   66 (365)
T ss_pred             CccEEEEEccC--CCC----cEEEE--EECCCC-CC-CEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccc--eeEE
Confidence            57899999876  443    45554  666655 77 9999999999999999988877542  3468999999  5569


Q ss_pred             EEEecCCCCCCCCCCEEEec--------------------------------------------------cCcceeEeec
Q 019042           87 SKVLDSTHPNYKKDDLVWGL--------------------------------------------------TSWEEYSLIQ  116 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~--------------------------------------------------g~~~~~~~~~  116 (347)
                      |+++|++++++++||+|++.                                                  |+|++|++++
T Consensus        67 V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~  146 (365)
T cd08277          67 VESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVD  146 (365)
T ss_pred             EEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEc
Confidence            99999999999999999863                                                  6799999999


Q ss_pred             CCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH
Q 019042          117 SPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKV  195 (347)
Q Consensus       117 ~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~  195 (347)
                      ++. ++++ |++++.. +++++++++.|||+++....++++|++|+|+| +|++|++++|+|+++|+ +|++++++++++
T Consensus       147 ~~~-~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~  222 (365)
T cd08277         147 ENY-VAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKF  222 (365)
T ss_pred             hhh-eEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            998 9999 9995554 68888999999999987778999999999998 59999999999999999 799999999999


Q ss_pred             HHHHHHhCCCeeEecCCh-hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCccccc
Q 019042          196 NLLKNKFGFDDAFNYKKE-PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPEGVHN  272 (347)
Q Consensus       196 ~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~  272 (347)
                      +.++ ++|+++++++.+. .++.+.+++++++++|++|||+|+ ..+..++++++++ |+++.+|...+..     ...+
T Consensus       223 ~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~  296 (365)
T cd08277         223 EKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAE-----LSIR  296 (365)
T ss_pred             HHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccc-----cccC
Confidence            9998 9999999887652 145677777776689999999996 6788999999885 9999999754211     1123


Q ss_pred             hHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          273 LMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       273 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      ...++ +++++.|+....+.  ....+++++++++++.++  +.++++|+++|+++||+.+.+++ ..|++++
T Consensus       297 ~~~~~-~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         297 PFQLI-LGRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             HhHHh-hCCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence            33333 37888887765532  245688999999998765  56888999999999999998877 4588873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-41  Score=306.31  Aligned_cols=311  Identities=18%  Similarity=0.190  Sum_probs=244.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +     .++++  ++|.|.|+++ +||+||+.++++|++|........  ....|.++|||+  +|+|+
T Consensus         1 Mka~~~~~~--~-----~~~~~--~~~~P~~~~~-~evlV~v~~~gi~~~D~~~~~~~~--~~~~p~i~G~e~--~G~V~   66 (347)
T PRK10309          1 MKSVVNDTD--G-----IVRVA--ESPIPEIKHQ-DDVLVKVASSGLCGSDIPRIFKNG--AHYYPITLGHEF--SGYVE   66 (347)
T ss_pred             CceEEEeCC--C-----ceEEE--ECCCCCCCCC-CEEEEEEEEEEEchhcHHHHhCCC--CCCCCcccccce--EEEEE
Confidence            589999765  3     23444  4666665456 999999999999999986432211  123588999994  45999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      ++|++++++++||+|+++                              |+|++|+.++++. ++++ |++++.. +++.+
T Consensus        67 ~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~~s~~-~aa~~  143 (347)
T PRK10309         67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKN-LFAL-PTDMPIE-DGAFI  143 (347)
T ss_pred             EeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHH-eEEC-cCCCCHH-Hhhhh
Confidence            999999999999999863                              7899999999998 9999 9995443 34443


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                       ....++|+++ ....+.+|++|+|+| +|++|++++|+|+++|++ |+++++++++++.++ ++|+++++++++. + .
T Consensus       144 -~~~~~~~~~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~-~  217 (347)
T PRK10309        144 -EPITVGLHAF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSREM-S-A  217 (347)
T ss_pred             -hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCccc-C-H
Confidence             3556688886 557889999999998 599999999999999996 788999999999998 9999999988764 4 4


Q ss_pred             HHHHHHCCC-Ccc-EEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccc
Q 019042          218 AALKRCFPE-GID-IYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ  294 (347)
Q Consensus       218 ~~i~~~~~~-~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  294 (347)
                      +.+.+.+.+ ++| ++|||+|. ..+..++++++++|+++.+|..... .  .........++.+++++.|+........
T Consensus       218 ~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~~~~~~~i~g~~~~~~~~~  294 (347)
T PRK10309        218 PQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKILRKELTVIGSWMNYSSPW  294 (347)
T ss_pred             HHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHHhhcCcEEEEEeccccCCc
Confidence            566666665 788 99999997 5889999999999999999975421 0  1111122356678899999866432111


Q ss_pred             hHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          295 YPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       295 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      .++.++++++++++|.++  +.++++|+|+|+++|++.+.+++..||+|+++.
T Consensus       295 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  347 (347)
T PRK10309        295 PGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP  347 (347)
T ss_pred             chhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence            246788999999999984  668899999999999999999888899999763

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1e-40  Score=301.00  Aligned_cols=315  Identities=18%  Similarity=0.219  Sum_probs=261.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +.|. +.  ++..++|.|.+ .+ +||+||+.++++|+.|+..+.|.+......|.++|||++  |+|+
T Consensus         1 m~a~~~~~~--~~~~-~~--~~~~~~~~p~~-~~-~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~--G~V~   71 (324)
T cd08292           1 MRAAVHTQF--GDPA-DV--LEIGEVPKPTP-GA-GEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAV--GVVD   71 (324)
T ss_pred             CeeEEEccC--CChh-He--EEEeecCCCCC-CC-CeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceE--EEEE
Confidence            589999876  5541 22  44455677765 77 999999999999999988887754323345789999954  5999


Q ss_pred             EecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           89 VLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      ++|++++++++||+|+++   |+|++|+++++.. ++++ |++++.. +++.++..+.+||+++. ..++.+|++|+|+|
T Consensus        72 ~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~~~-~~~~~~g~~vlI~g  147 (324)
T cd08292          72 AVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADG-LVPL-PDGISDE-VAAQLIAMPLSALMLLD-FLGVKPGQWLIQNA  147 (324)
T ss_pred             EeCCCCCCCCCCCEEEeccCCCcceeEEEEchHH-eEEC-CCCCCHH-HhhhccccHHHHHHHHH-hhCCCCCCEEEEcc
Confidence            999999999999999985   7999999999988 9999 9995554 58888888999999984 47999999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVL  244 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~  244 (347)
                      ++|++|++++|+|+++|++++++++++++.+.++ ++|+++++++.+. ++.+.+.+++++ ++|++|||+|+.....++
T Consensus       148 ~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~  225 (324)
T cd08292         148 AGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGGKLAGELL  225 (324)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCChhHHHHH
Confidence            9999999999999999999999999999989998 7899888888776 788889988887 899999999998889999


Q ss_pred             HhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-----ccchHHHHHHHHHHHHcCCcccccceee
Q 019042          245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       245 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      ++++++|+++.+|.....     ....+....+.+++++.++....+     +....+.++++++++.+|.+++.+...|
T Consensus       226 ~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~  300 (324)
T cd08292         226 SLLGEGGTLVSFGSMSGE-----PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVF  300 (324)
T ss_pred             HhhcCCcEEEEEecCCCC-----CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEe
Confidence            999999999999875221     112344445668999998876543     2234567899999999999987777889


Q ss_pred             ccccHHHHHHHhHcCCCcceEEEE
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++++.+|++.+.++...||++++
T Consensus       301 ~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         301 DLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             cHHHHHHHHHHHHcCCCCceEEeC
Confidence            999999999999888888899874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.1e-40  Score=303.36  Aligned_cols=292  Identities=17%  Similarity=0.182  Sum_probs=239.6

Q ss_pred             EeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEe----
Q 019042           30 ITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG----  105 (347)
Q Consensus        30 ~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~----  105 (347)
                      +.+++|.|.| ++ +||+||+.++++|++|++...+.......+|.++|||  ++|+|+++|++++.+ +||+|+.    
T Consensus        12 ~~~~~p~P~~-~~-~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE--~~G~V~~vG~~v~~~-~GdrV~~~~~~   86 (349)
T TIGR03201        12 VKTRVEIPEL-GA-GDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHE--ISGRVIQAGAGAASW-IGKAVIVPAVI   86 (349)
T ss_pred             eEEeccCCCC-CC-CeEEEEEEEEeecccchHHHcCCCCccCCCCeecccc--ceEEEEEeCCCcCCC-CCCEEEECCCC
Confidence            3345677766 77 9999999999999999987644332233568999999  556999999999887 9999985    


Q ss_pred             --------------------------ccCcceeEeecCCCcceeccCC------CCCccccccccCCchhhHHHHhhhhc
Q 019042          106 --------------------------LTSWEEYSLIQSPQHLIKILDT------NVPLSYYTGILGMPGLTAYGGLYELC  153 (347)
Q Consensus       106 --------------------------~g~~~~~~~~~~~~~~~~i~P~------~~~~~~~aa~l~~~~~tA~~~l~~~~  153 (347)
                                                .|+|++|++++++. ++++ |+      +++.. .+++++.++.+||+++.. .
T Consensus        87 ~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~-~~~i-p~~~~~~~~~~~~-~~a~~~~~~~ta~~a~~~-~  162 (349)
T TIGR03201        87 PCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKG-LCVV-DEARLAAAGLPLE-HVSVVADAVTTPYQAAVQ-A  162 (349)
T ss_pred             CCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHH-eEEC-CcccccccCCCHH-HhhhhcchHHHHHHHHHh-c
Confidence                                      27899999999998 9999 88      64443 578888999999999864 7


Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh--hhHHHHHHHHCCC-Ccc-
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE--PDLDAALKRCFPE-GID-  229 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~~~~-~~d-  229 (347)
                      .+++|++|+|+|+ |++|++++|+|++.|++|++++++++++++++ ++|+++++++.+.  .++.+.+++++++ ++| 
T Consensus       163 ~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~  240 (349)
T TIGR03201       163 GLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSAREVKKLIKAFAKARGLRS  240 (349)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHHHHHHHHhhcccCCCCC
Confidence            8999999999998 99999999999999999999999999999998 8999988887653  1567778888876 776 


Q ss_pred             ---EEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHH
Q 019042          230 ---IYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPA  305 (347)
Q Consensus       230 ---~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  305 (347)
                         ++|||+|. ..+..++++++++|+++.+|.....      ...+...++.++.++.|++...     .+.+++++++
T Consensus       241 ~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~  309 (349)
T TIGR03201       241 TGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK------TEYRLSNLMAFHARALGNWGCP-----PDRYPAALDL  309 (349)
T ss_pred             CcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC------cccCHHHHhhcccEEEEEecCC-----HHHHHHHHHH
Confidence               89999998 4677899999999999999975421      1234455666778888776543     4678999999


Q ss_pred             HHcCCcccc-cceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          306 IKEGKLVYV-EDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       306 ~~~g~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++|++++. +.+.|+++|+++||+.+.+++..||++++
T Consensus       310 i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~  348 (349)
T TIGR03201       310 VLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILT  348 (349)
T ss_pred             HHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence            999999752 33468999999999999999888999885

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=6.2e-41  Score=298.84  Aligned_cols=327  Identities=23%  Similarity=0.294  Sum_probs=252.7

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCc---ccCCCCCCcee
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSF---VASFNPGEPLS   82 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~---~~p~v~G~e~~   82 (347)
                      .++++.+.+..++ +.+.    .....+.|.|.| .+ ++++|++.++++||.|+....+.+....   .+|.+++++.+
T Consensus         2 ~~~~~~~~~~~~~-~~~~----~~~~~~~~iP~~-~~-~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~   74 (347)
T KOG1198|consen    2 VKKIRRVSLVSPP-GGGE----VLFSEEVPIPEP-ED-GEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGS   74 (347)
T ss_pred             ccccceEEEeccC-CCcc----eEEeecccCCCC-CC-CceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccC
Confidence            3445566665551 2221    344456788888 66 9999999999999999999998877666   77877787755


Q ss_pred             ec-eEEEEec-CCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhc----
Q 019042           83 GY-GVSKVLD-STHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELC----  153 (347)
Q Consensus        83 g~-G~v~~vG-~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~----  153 (347)
                      +. |.+..+| ..+..+..||.+...   |+|+||+++++.. ++++ |+++++. ++|++|.+++|||.++....    
T Consensus        75 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~-~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~~~~  151 (347)
T KOG1198|consen   75 GVVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKL-LVKI-PESLSFE-EAAALPLAALTALSALFQLAPGKR  151 (347)
T ss_pred             CceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhh-ccCC-CCccChh-hhhcCchHHHHHHHHHHhcccccc
Confidence            54 5555566 455667888877766   8999999999888 9999 9996555 79999999999999999988    


Q ss_pred             --CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          154 --SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       154 --~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                        +.++|++|||+||+|++|++++|+|+++|+..++++.++++.++++ ++|+++++||+++ ++.+.+...+.+++|+|
T Consensus       152 ~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~~DvV  229 (347)
T KOG1198|consen  152 SKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGKGVDVV  229 (347)
T ss_pred             ccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCCccEE
Confidence              8999999999999999999999999999965555555778889999 9999999999997 99999999885599999


Q ss_pred             EECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc----ccchHHHHHHHHHHHH
Q 019042          232 FENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF----YHQYPKFLELVMPAIK  307 (347)
Q Consensus       232 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~  307 (347)
                      |||+|+.....++.++...|+...++.............. ............+.....+    .....+.++.+.++++
T Consensus       230 lD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie  308 (347)
T KOG1198|consen  230 LDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLDDL-WQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIE  308 (347)
T ss_pred             EECCCCCccccchhhhccCCceEEEEeccccccccccccc-hhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHH
Confidence            9999998888899999998876555543322111111100 0011111111111111111    3445788999999999


Q ss_pred             cCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          308 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       308 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      .+++++.+.+.||++++.+|++.+.++...||+++.+.
T Consensus       309 ~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  309 KGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             cCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            99999999999999999999999999999999999875

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.1e-40  Score=307.38  Aligned_cols=312  Identities=16%  Similarity=0.123  Sum_probs=242.1

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccc-cCCCCC-----CcccCCCCCCc
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRM-SKLDKP-----SFVASFNPGEP   80 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~-~~~~~~-----~~~~p~v~G~e   80 (347)
                      |+|||+++..+       ..+++  .++|.|.| ++ +||+||+.++|+|++|++.+ .+....     ...+|+++|||
T Consensus         1 m~~~a~~~~~~-------~~l~~--~e~p~P~~-~~-~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE   69 (410)
T cd08238           1 MKTKAWRMYGK-------GDLRL--EKFELPEI-AD-DEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHE   69 (410)
T ss_pred             CCcEEEEEEcC-------CceEE--EecCCCCC-CC-CeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccc
Confidence            57899999665       23445  45777766 77 99999999999999999865 342111     12368899999


Q ss_pred             eeeceEEEEecCCCC-CCCCCCEEEec-------------------cCcceeEeecCC----CcceeccCCCCCcccccc
Q 019042           81 LSGYGVSKVLDSTHP-NYKKDDLVWGL-------------------TSWEEYSLIQSP----QHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        81 ~~g~G~v~~vG~~v~-~~~vGd~V~~~-------------------g~~~~~~~~~~~----~~~~~i~P~~~~~~~~aa  136 (347)
                      +  +|+|+++|++++ .+++||+|+..                   |+|+||++++++    . ++++ |++++.  +.+
T Consensus        70 ~--~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~-~~~l-P~~l~~--~~a  143 (410)
T cd08238          70 F--AGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQD-CLLI-YEGDGY--AEA  143 (410)
T ss_pred             c--EEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCC-eEEC-CCCCCH--HHH
Confidence            4  559999999998 59999999863                   789999999987    5 8999 999544  333


Q ss_pred             ccCCch---hhHHHHh--------hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh
Q 019042          137 ILGMPG---LTAYGGL--------YELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKEKVNLLKNKF  202 (347)
Q Consensus       137 ~l~~~~---~tA~~~l--------~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~---~V~~~~~~~~~~~~~~~~~  202 (347)
                      ++..++   .+++.++        .+..++++|++|+|+|++|++|++++|+|++.|+   +|++++++++|++.++ ++
T Consensus       144 al~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~  222 (410)
T cd08238         144 SLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RL  222 (410)
T ss_pred             hhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hh
Confidence            333222   1234332        2446889999999999889999999999999864   8999999999999999 76


Q ss_pred             --------CCC-eeEecCChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCcccc
Q 019042          203 --------GFD-DAFNYKKEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVH  271 (347)
Q Consensus       203 --------g~~-~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  271 (347)
                              |++ .++++++.+++.+.+++++++ ++|++||++|. ..+..++++++++|+++.++.....   .....+
T Consensus       223 ~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~  299 (410)
T cd08238         223 FPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPL  299 (410)
T ss_pred             ccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---Cccccc
Confidence                    665 567765422788888888877 89999999986 7889999999999988776432111   001234


Q ss_pred             chHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          272 NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       272 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      +...++.+++++.|+....     .++++++++++++|++++  .++++|+++|+++|++.+. ++..||+|+.++
T Consensus       300 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         300 NFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             cHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            5567778999999986544     567899999999999987  5888999999999999998 777899999874

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.6e-40  Score=303.21  Aligned_cols=300  Identities=17%  Similarity=0.158  Sum_probs=232.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCC--cccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPS--FVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~--~~~p~v~G~e~~g~G~   86 (347)
                      |||+++...   .+  + ++++  ++|.|.| ++ +|||||++++|+|++|++.+.|.+...  ..+|.++|||  ++|+
T Consensus         1 mka~~~~~~---~~--~-l~~~--~~p~p~~-~~-~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e--~~G~   68 (355)
T cd08230           1 MKAIAVKPG---KP--G-VRVV--DIPEPEP-TP-GEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHE--ALGV   68 (355)
T ss_pred             CceeEecCC---CC--C-CeEE--eCCCCCC-CC-CeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccc--cceE
Confidence            588888643   33  2 4554  4777766 77 999999999999999999888754221  2357899999  5669


Q ss_pred             EEEecCCCCCCCCCCEEEec---------------------------------cCcceeEeecCCCcceeccCCCCCccc
Q 019042           87 SKVLDSTHPNYKKDDLVWGL---------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSY  133 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~---------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~  133 (347)
                      |+++|++ +.|++||+|+..                                 |+|++|++++++. ++++ |+++  + 
T Consensus        69 V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~-~~~~-P~~~--~-  142 (355)
T cd08230          69 VEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEY-LVKV-PPSL--A-  142 (355)
T ss_pred             EEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEecccc-EEEC-CCCC--C-
Confidence            9999999 999999999752                                 6799999999999 9999 9994  4 


Q ss_pred             cccccCCchhhHHHHhhhh------cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCC
Q 019042          134 YTGILGMPGLTAYGGLYEL------CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGF  204 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~------~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~  204 (347)
                      +++++..++.+++.++...      .+..+|++|+|+|+ |++|++++|+|++.|++|+++++   +++++++++ ++|+
T Consensus       143 ~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga  220 (355)
T cd08230         143 DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGA  220 (355)
T ss_pred             cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCC
Confidence            5566666776666554322      23568999999995 99999999999999999999987   678989998 9999


Q ss_pred             CeeEecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccc----hHHHHhc
Q 019042          205 DDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHN----LMQVVGK  279 (347)
Q Consensus       205 ~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~  279 (347)
                      +. +++.+. ++.+ ..  ..+++|++|||+|+ ..+..++++++++|+++.+|...+..    ...++    ...++.+
T Consensus       221 ~~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~----~~~~~~~~~~~~~~~k  291 (355)
T cd08230         221 TY-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGR----EFEVDGGELNRDLVLG  291 (355)
T ss_pred             EE-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCC----ccccChhhhhhhHhhc
Confidence            86 566554 5443 21  12479999999997 57899999999999999999765310    01112    3456779


Q ss_pred             cceeeeeEecccccchHHHHHHHHHHHHcCC------cccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          280 RIRMEGFLAGDFYHQYPKFLELVMPAIKEGK------LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       280 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++++.|+....     .++++++++++.++.      +++.++++|+++|+.+||+.+.++.  +|++|+|
T Consensus       292 ~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         292 NKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             CcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            99999986544     356777888887766      5667889999999999999887554  5999975

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=3.8e-40  Score=302.78  Aligned_cols=312  Identities=17%  Similarity=0.156  Sum_probs=237.4

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCC------CCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCce
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPE------GSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPL   81 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~------~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~   81 (347)
                      .|||+++..+       ..+++++  +|.|.|.      ++ +||||||.++|||++|++.+.|..  ...+|+++||| 
T Consensus         2 ~mka~v~~~~-------~~~~~~e--~~~P~~~~~~~~~~~-~eVlVkv~a~gIcgsD~~~~~g~~--~~~~p~i~GhE-   68 (393)
T TIGR02819         2 GNRGVVYLGP-------GKVEVQD--IDYPKLELPDGRKCE-HGVILKVVTTNICGSDQHMVRGRT--TAPTGLVLGHE-   68 (393)
T ss_pred             CceEEEEecC-------CceeEEe--ccCCcccCCCccCCC-CeEEEEEEEeeecHHHHHHHCCCC--CCCCCccccce-
Confidence            4789999665       2345655  5556542      26 899999999999999999887743  23568999999 


Q ss_pred             eeceEEEEecCCCCCCCCCCEEEe----------------------------------------ccCcceeEeecCC--C
Q 019042           82 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------LTSWEEYSLIQSP--Q  119 (347)
Q Consensus        82 ~g~G~v~~vG~~v~~~~vGd~V~~----------------------------------------~g~~~~~~~~~~~--~  119 (347)
                       ++|+|+++|++|+++++||||+.                                        .|+|+||+++++.  .
T Consensus        69 -~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~  147 (393)
T TIGR02819        69 -ITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFN  147 (393)
T ss_pred             -eEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCc
Confidence             55599999999999999999954                                        1688999999964  5


Q ss_pred             cceeccCCCCCcc---ccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEE-EEEeCCHHHH
Q 019042          120 HLIKILDTNVPLS---YYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV-VGSAGSKEKV  195 (347)
Q Consensus       120 ~~~~i~P~~~~~~---~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V-~~~~~~~~~~  195 (347)
                       ++++ |++++..   ..++++..++.+||+++. ..++++|++|+|.| +|++|++++|+|+.+|+++ ++++++++|+
T Consensus       148 -l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~  223 (393)
T TIGR02819       148 -LLKF-PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARL  223 (393)
T ss_pred             -eEEC-CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence             9999 9874321   136788889999999985 47899999999976 5999999999999999975 4456678899


Q ss_pred             HHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCch---------------hHHHHHHhhccCCEEEEEccc
Q 019042          196 NLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGK---------------MLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       196 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.++ ++|++. +++....++.+.+.+++++ ++|++|||+|..               .++.++++++++|+++.+|.+
T Consensus       224 ~~a~-~~Ga~~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~  301 (393)
T TIGR02819       224 AQAR-SFGCET-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLY  301 (393)
T ss_pred             HHHH-HcCCeE-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeec
Confidence            9999 999974 5553322677788888776 899999999974               799999999999999999985


Q ss_pred             cc-ccCCCC------ccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccc-eeeccccHHHHHH
Q 019042          260 SQ-YNLEKP------EGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VED-IAEGLEKAPSALV  329 (347)
Q Consensus       260 ~~-~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~a~~  329 (347)
                      .. ......      .........+.+++++.+.....     .+.+.++++++.+|++++  .++ ++|+|+|+++||+
T Consensus       302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~  376 (393)
T TIGR02819       302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV-----MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYA  376 (393)
T ss_pred             CCcccccccccccccccccchHHhhccCceEEeccCCh-----hhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHH
Confidence            31 110000      01122344455666666632211     233467999999999875  345 6899999999999


Q ss_pred             HhHcCCCcceEEEEeC
Q 019042          330 GIFTGQNVGKQLVVVA  345 (347)
Q Consensus       330 ~~~~~~~~gkivi~~~  345 (347)
                      .+.+++ .+|++|.++
T Consensus       377 ~~~~~~-~~Kvvi~~~  391 (393)
T TIGR02819       377 EFDAGA-AKKFVIDPH  391 (393)
T ss_pred             HHhhCC-ceEEEEeCC
Confidence            998775 489999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=4.9e-40  Score=299.78  Aligned_cols=303  Identities=19%  Similarity=0.175  Sum_probs=249.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC----------CCcccCCCCC
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK----------PSFVASFNPG   78 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~----------~~~~~p~v~G   78 (347)
                      |||+++.++       +.+++++  +|.|.| ++ +||+||+.++++|++|+....+...          ....+|.++|
T Consensus         1 mka~~~~~~-------~~l~~~~--~~~p~~-~~-~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G   69 (351)
T cd08233           1 MKAARYHGR-------KDIRVEE--VPEPPV-KP-GEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLG   69 (351)
T ss_pred             CceEEEecC-------CceEEEe--ccCCCC-CC-CeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceec
Confidence            589999765       2345554  666655 77 9999999999999999865543211          0123589999


Q ss_pred             CceeeceEEEEecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCC
Q 019042           79 EPLSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDT  127 (347)
Q Consensus        79 ~e~~g~G~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~  127 (347)
                      ||  ++|+|+++|++++++++||+|++                               .|+|++|+.++.+. ++++ |+
T Consensus        70 ~e--~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-~~~l-P~  145 (351)
T cd08233          70 HE--FSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYH-VHKL-PD  145 (351)
T ss_pred             cc--ceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHH-eEEC-cC
Confidence            99  55699999999999999999985                               37899999999988 9999 99


Q ss_pred             CCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCe
Q 019042          128 NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDD  206 (347)
Q Consensus       128 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~  206 (347)
                      +++.. +++ +..++.+||+++ ...++.+|++|+|+|+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|++.
T Consensus       146 ~~~~~-~aa-~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~  220 (351)
T cd08233         146 NVPLE-EAA-LVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATI  220 (351)
T ss_pred             CCCHH-Hhh-hccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCE
Confidence            95443 344 446788999999 6689999999999985 9999999999999999 8999999999999998 899999


Q ss_pred             eEecCChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceee
Q 019042          207 AFNYKKEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRME  284 (347)
Q Consensus       207 vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      ++++.+. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|....      ....+...++.+++++.
T Consensus       221 ~i~~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~  293 (351)
T cd08233         221 VLDPTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLT  293 (351)
T ss_pred             EECCCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEE
Confidence            9998876 888888888876 79999999986 688999999999999999997541      12345566778899998


Q ss_pred             eeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccH-HHHHHHhHcCCCc-ceEEEE
Q 019042          285 GFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKA-PSALVGIFTGQNV-GKQLVV  343 (347)
Q Consensus       285 g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gkivi~  343 (347)
                      ++....     .+.++++++++++|+++  +.++.+|+++|+ ++|++.+.+++.. ||+||.
T Consensus       294 g~~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         294 GSICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             EEeccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            886543     46789999999999995  457889999996 7999999998874 899873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.1e-40  Score=300.29  Aligned_cols=294  Identities=17%  Similarity=0.133  Sum_probs=226.1

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCC---cccCCCCCCceee
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPS---FVASFNPGEPLSG   83 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~---~~~p~v~G~e~~g   83 (347)
                      |.+|+++++.+       +++++++  +|.| + ++ +||+|||+++|||++|++.+.|.+...   ..+|+++|||  +
T Consensus         1 ~~~~~~~~~~~-------~~~~~~~--~~~P-~-~~-~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE--~   66 (341)
T cd08237           1 MINQVYRLVRP-------KFFEVTY--EEEN-L-RE-DWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHE--G   66 (341)
T ss_pred             CcccceEEecc-------ceEEEee--cCCC-C-CC-CeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccce--e
Confidence            56788888665       3345554  5666 5 77 999999999999999999888754221   2468999999  4


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec---------------------------cCcceeEeecCCCcceeccCCCCCcccccc
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL---------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~---------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa  136 (347)
                      +|+|+++|.+  +|++||+|+..                           |+|+||++++++. ++++ |++++.  +.|
T Consensus        67 ~G~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v-P~~l~~--~~a  140 (341)
T cd08237          67 IGVVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDR-LVKL-PDNVDP--EVA  140 (341)
T ss_pred             EEEEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHH-eEEC-CCCCCh--HHh
Confidence            5599998764  79999999752                           7799999999999 9999 999444  556


Q ss_pred             ccCCchhhHHHHhhhh--cCCCCCCEEEEEcCCChHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          137 ILGMPGLTAYGGLYEL--CSPKKGEYVYVSAASGAVGQLVGQFAKL-VG-CYVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~--~~~~~~~~vlI~ga~g~vG~~a~qla~~-~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      +++.++.+||+++...  ..+++|++|+|+|+ |++|++++|++++ .| .+|++++++++|++.++ +++++..++   
T Consensus       141 a~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~---  215 (341)
T cd08237         141 AFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID---  215 (341)
T ss_pred             hhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh---
Confidence            6778899999998543  35688999999995 9999999999986 55 58999999999999998 666543221   


Q ss_pred             hhhHHHHHHHHCCCCccEEEECCCc----hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEe
Q 019042          213 EPDLDAALKRCFPEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLA  288 (347)
Q Consensus       213 ~~~~~~~i~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  288 (347)
                        ++.+.      .++|++||++|+    ..+..++++++++|+++.+|....      ...++...++.+++++.|+..
T Consensus       216 --~~~~~------~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~  281 (341)
T cd08237         216 --DIPED------LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVGSSR  281 (341)
T ss_pred             --hhhhc------cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEEecc
Confidence              22111      159999999994    378999999999999999987431      123445567789999998865


Q ss_pred             cccccchHHHHHHHHHHHHcC-----CcccccceeeccccH---HHHHHHhHcCCCcceEEEEeC
Q 019042          289 GDFYHQYPKFLELVMPAIKEG-----KLVYVEDIAEGLEKA---PSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~---~~a~~~~~~~~~~gkivi~~~  345 (347)
                      ..     .+.+++++++++++     .+++.++++|+++++   .++++...++ ..||+||+++
T Consensus       282 ~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         282 ST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             cC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            43     46789999999998     577788899998655   4555444443 6899999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=4.6e-40  Score=293.94  Aligned_cols=289  Identities=14%  Similarity=0.173  Sum_probs=224.0

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecC-hhccccccCCCCCC--cccCCCCCCceeec
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCD-PYMRGRMSKLDKPS--FVASFNPGEPLSGY   84 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~-~~d~~~~~~~~~~~--~~~p~v~G~e~~g~   84 (347)
                      ++||+++..+       +.++++  ++|.|.| ++ +||+||+.+++|| .+|++.+.|.+...  ..+|.++|||+  +
T Consensus         1 ~~ka~~~~~~-------~~l~~~--e~~~p~~-~~-~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~--~   67 (308)
T TIGR01202         1 KTQAIVLSGP-------NQIELR--EVTLTPP-SP-GDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYES--V   67 (308)
T ss_pred             CceEEEEeCC-------CeEEEE--EecCCCC-CC-CeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCccee--E
Confidence            5789999654       335554  4677766 77 9999999999996 58988777754221  24699999994  5


Q ss_pred             eEEEEecCCCCCCCCCCEEEe------------ccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhh
Q 019042           85 GVSKVLDSTHPNYKKDDLVWG------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYEL  152 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~  152 (347)
                      |+|+++|+++ ++++||||+.            .|+|+||++++++. ++++ |++++.  +++.+ ..+.|||+++.+ 
T Consensus        68 G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~-~~~i-p~~~~~--~~a~~-~~~~~a~~~~~~-  140 (308)
T TIGR01202        68 GRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASR-VCRL-DPALGP--QGALL-ALAATARHAVAG-  140 (308)
T ss_pred             EEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHH-ceeC-CCCCCH--HHHhh-hHHHHHHHHHHh-
Confidence            5999999998 6999999985            48999999999999 9999 998543  44444 457899999855 


Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      . ..++++++|+| +|++|++++|+|+++|++ |+++..++++++.+. .   ..++|+.+  +        .++++|++
T Consensus       141 ~-~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~---~~~i~~~~--~--------~~~g~Dvv  204 (308)
T TIGR01202       141 A-EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-G---YEVLDPEK--D--------PRRDYRAI  204 (308)
T ss_pred             c-ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-h---ccccChhh--c--------cCCCCCEE
Confidence            3 34688999998 599999999999999996 555666666766554 3   34455432  1        12379999


Q ss_pred             EECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCC
Q 019042          232 FENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       232 id~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~  310 (347)
                      |||+|+ ..++.++++++++|+++.+|.....      ...+...++.+++++.++....     .+.++++++++++|+
T Consensus       205 id~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~g~  273 (308)
T TIGR01202       205 YDASGDPSLIDTLVRRLAKGGEIVLAGFYTEP------VNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIESGA  273 (308)
T ss_pred             EECCCCHHHHHHHHHhhhcCcEEEEEeecCCC------cccccchhhhcceEEEEecccc-----hhHHHHHHHHHHcCC
Confidence            999998 4789999999999999999975321      1234455667888888765443     567999999999999


Q ss_pred             ccc--ccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          311 LVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       311 ~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++  .++++|+|+|+++|++.+.++...+|++|+
T Consensus       274 i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       274 LSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             CChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            975  588899999999999998877777899874

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=3.6e-39  Score=295.16  Aligned_cols=306  Identities=19%  Similarity=0.195  Sum_probs=245.4

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      ||+++.++  +.+    +++++  +|.|.| ++ +||+||+.++++|++|+....|.+.. ..+|.++|||  ++|+|++
T Consensus         2 ka~~~~~~--~~~----l~~~~--~~~p~~-~~-~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e--~~G~V~~   68 (361)
T cd08231           2 RAAVLTGP--GKP----LEIRE--VPLPDL-EP-GAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHE--GVGRVVA   68 (361)
T ss_pred             eEEEEcCC--CCC----CEEEe--ccCCCC-CC-CeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccC--CceEEEE
Confidence            78999887  432    45554  666766 77 99999999999999999888775432 4568899999  5569999


Q ss_pred             ecCCCCC------CCCCCEEEec-------------------------------------cCcceeEeecCC-Ccceecc
Q 019042           90 LDSTHPN------YKKDDLVWGL-------------------------------------TSWEEYSLIQSP-QHLIKIL  125 (347)
Q Consensus        90 vG~~v~~------~~vGd~V~~~-------------------------------------g~~~~~~~~~~~-~~~~~i~  125 (347)
                      +|+++++      +++||+|+++                                     |+|++|++++++ . ++++ 
T Consensus        69 vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~-~~~l-  146 (361)
T cd08231          69 LGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA-IVRV-  146 (361)
T ss_pred             eCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCc-eEEC-
Confidence            9999986      9999999875                                     789999999986 6 9999 


Q ss_pred             CCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC
Q 019042          126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGF  204 (347)
Q Consensus       126 P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~  204 (347)
                      |++++.. +++++++++.|||+++.......+|++|||+| +|++|++++|+|++.|+ +|+++++++++.+.++ ++|+
T Consensus       147 P~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~  223 (361)
T cd08231         147 PDNVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-EFGA  223 (361)
T ss_pred             CCCCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCC
Confidence            9995443 57777799999999997766667999999998 59999999999999999 9999999999999998 9999


Q ss_pred             CeeEecCCh--hhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhcc
Q 019042          205 DDAFNYKKE--PDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKR  280 (347)
Q Consensus       205 ~~vi~~~~~--~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  280 (347)
                      ++++++++.  .++.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    .....+...++.++
T Consensus       224 ~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~  299 (361)
T cd08231         224 DATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIVRKN  299 (361)
T ss_pred             CeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHhhcc
Confidence            888887653  0233567777776 89999999987 5788999999999999999875321    11123334567788


Q ss_pred             ceeeeeEecccccchHHHHHHHHHHHHcC----CcccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          281 IRMEGFLAGDFYHQYPKFLELVMPAIKEG----KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       281 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++.++....     .+.++++++++.++    .+.+.++++|+++++++||+.+.++.. +|+||.
T Consensus       300 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~  360 (361)
T cd08231         300 LTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVID  360 (361)
T ss_pred             cEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeC
Confidence            9988886544     34566677777766    345567888999999999999988764 799985

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=5.6e-39  Score=296.99  Aligned_cols=320  Identities=18%  Similarity=0.199  Sum_probs=257.2

Q ss_pred             cccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC---------Cccc
Q 019042            3 GEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP---------SFVA   73 (347)
Q Consensus         3 ~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~---------~~~~   73 (347)
                      +..|.+|||+++.....|.|. +.  ++..++|.|.+ ++ +||+||+.++++|.+|.+...+....         ...+
T Consensus         7 ~~~~~~~~a~~~~~~~~g~~~-~~--~~~~~~~~p~l-~~-~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~   81 (393)
T cd08246           7 GVVPEKMYAFAIRPERYGDPA-QA--IQLEDVPVPEL-GP-GEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEP   81 (393)
T ss_pred             CcCchhhhheeeecccCCCcc-cc--eEEeecCCCCC-CC-CEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCC
Confidence            446788999999754235552 23  44445677755 77 99999999999999998776553110         0123


Q ss_pred             CCCCCCceeeceEEEEecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCcce
Q 019042           74 SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQHLI  122 (347)
Q Consensus        74 p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~~~  122 (347)
                      +.++|||++  |+|+.+|++++.+++||+|+++                               |+|++|++++... ++
T Consensus        82 ~~~~G~e~~--G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~-l~  158 (393)
T cd08246          82 YHIGGSDAS--GIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQ-LM  158 (393)
T ss_pred             ccccccceE--EEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHH-eE
Confidence            468999954  5999999999999999999874                               7899999999988 99


Q ss_pred             eccCCCCCccccccccCCchhhHHHHhhhh--cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Q 019042          123 KILDTNVPLSYYTGILGMPGLTAYGGLYEL--CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN  200 (347)
Q Consensus       123 ~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~  200 (347)
                      ++ |++++.. +++.++..+.|||+++...  +++.++++|+|+|+.|++|++++++|++.|++++++++++++.+.++ 
T Consensus       159 ~i-P~~l~~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-  235 (393)
T cd08246         159 PK-PKHLSWE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-  235 (393)
T ss_pred             EC-CCCCCHH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-
Confidence            99 9995554 5788999999999998654  68899999999998899999999999999999999999999999999 


Q ss_pred             HhCCCeeEecCCh---------------------hhHHHHHHHHCCC--CccEEEECCCchhHHHHHHhhccCCEEEEEc
Q 019042          201 KFGFDDAFNYKKE---------------------PDLDAALKRCFPE--GIDIYFENVGGKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       201 ~~g~~~vi~~~~~---------------------~~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ++|+++++|+++.                     ..+.+.+.+++++  ++|++|||+|+..+..++++++++|+++.+|
T Consensus       236 ~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g  315 (393)
T cd08246         236 ALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICA  315 (393)
T ss_pred             HcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEc
Confidence            8999988886432                     0255677777765  6999999999888899999999999999998


Q ss_pred             ccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcC-CC
Q 019042          258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTG-QN  336 (347)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~  336 (347)
                      ......     ...+...++.++.++.++....     .+.+.+++++++++.+.+.++++|+++++++|++.+.++ +.
T Consensus       316 ~~~~~~-----~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~  385 (393)
T cd08246         316 GTTGYN-----HTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHH  385 (393)
T ss_pred             ccCCCC-----CCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccc
Confidence            754221     1234455666777877775544     467888999999999987778889999999999999998 78


Q ss_pred             cceEEEE
Q 019042          337 VGKQLVV  343 (347)
Q Consensus       337 ~gkivi~  343 (347)
                      .||+++-
T Consensus       386 ~gkvvv~  392 (393)
T cd08246         386 VGNMAVL  392 (393)
T ss_pred             cceEEEe
Confidence            8999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=6.4e-39  Score=289.78  Aligned_cols=293  Identities=22%  Similarity=0.191  Sum_probs=235.2

Q ss_pred             ecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCC-CCCCceeeceEEEEecCCCCCCCCCCEEEec----
Q 019042           32 GSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASF-NPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL----  106 (347)
Q Consensus        32 ~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~-v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~----  106 (347)
                      .+.+.|.+ .+ +||+|||.++|||++|++.+.+.... ..+|. ++|||++|  +|+++| .++.+++||||+..    
T Consensus        16 ~~~~~p~~-~p-~~vlVkv~~~gICGSDlh~~~g~~~~-~~~~~~i~GHE~~G--~V~evG-~~~~~~~GdrVvv~~~~~   89 (350)
T COG1063          16 EEPPPPIP-GP-GDVLIRVTATGICGSDLHIYRGGEPF-VPPGDIILGHEFVG--EVVEVG-VVRGFKVGDRVVVEPNIP   89 (350)
T ss_pred             ccCCCCCC-CC-CeEEEEEEEEeEchhhhhhccCCCCC-CCCCCcccCccceE--EEEEec-cccCCCCCCEEEECCCcC
Confidence            33444423 66 99999999999999999999985433 23344 99999665  999999 77889999999731    


Q ss_pred             -------------------------------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCC
Q 019042          107 -------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSP  155 (347)
Q Consensus       107 -------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~  155 (347)
                                                     |+++||+++|.+..+.++ |+++  +.++++|..++.+++++.......
T Consensus        90 Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~-pd~~--~~~~aal~epla~~~~~~a~~~~~  166 (350)
T COG1063          90 CGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKL-PDGI--DEEAAALTEPLATAYHGHAERAAV  166 (350)
T ss_pred             CCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecC-CCCC--ChhhhhhcChhhhhhhhhhhccCC
Confidence                                           588999999987646666 8874  547999999999998774444566


Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFE  233 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid  233 (347)
                      .++++|+|+|+ |++|++++++++..|+ +|++++.+++|++++++.+|++.+++.... +....+.+.+.+ ++|++||
T Consensus       167 ~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~-~~~~~~~~~t~g~g~D~vie  244 (350)
T COG1063         167 RPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED-DAGAEILELTGGRGADVVIE  244 (350)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc-cHHHHHHHHhCCCCCCEEEE
Confidence            66669999995 9999999999999998 888889999999999933666666665553 667778888888 9999999


Q ss_pred             CCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc
Q 019042          234 NVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV  312 (347)
Q Consensus       234 ~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  312 (347)
                      |+|. ..+..++++++++|+++.+|.+....     ...+...++.|++++.|+....    ....++.+++++++|++.
T Consensus       245 ~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel~l~gs~~~~----~~~~~~~~~~ll~~g~i~  315 (350)
T COG1063         245 AVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKELTLRGSLRPS----GREDFERALDLLASGKID  315 (350)
T ss_pred             CCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhcccEEEeccCCC----CcccHHHHHHHHHcCCCC
Confidence            9998 57899999999999999999865321     1456778889999999984322    146789999999999998


Q ss_pred             cc--cceeeccccHHHHHHHhHcCCC-cceEEEEe
Q 019042          313 YV--EDIAEGLEKAPSALVGIFTGQN-VGKQLVVV  344 (347)
Q Consensus       313 ~~--~~~~~~~~~~~~a~~~~~~~~~-~gkivi~~  344 (347)
                      +.  +++.++++++++||+.+.+.+. ..|+++.+
T Consensus       316 ~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         316 PEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             hhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            64  6677799999999999998654 55888864

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.2e-38  Score=288.56  Aligned_cols=301  Identities=20%  Similarity=0.233  Sum_probs=251.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +.+    +++  .++|.|.+ ++ +||+||+.++++|++|+....+.... ..+|.++|||  ++|+|+
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~p~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e--~~G~v~   67 (333)
T cd08296           1 YKAVQVTEP--GGP----LEL--VERDVPLP-GP-GEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHE--VVGRID   67 (333)
T ss_pred             CeEEEEccC--CCC----ceE--EeccCCCC-CC-CEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcc--eeEEEE
Confidence            589999776  433    344  45777765 77 99999999999999998887764321 3457899999  556999


Q ss_pred             EecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      ++|++++++++||+|++                               .|++++|+.++.+. ++++ |++++.. ++++
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~-~~~l-p~~~~~~-~aa~  144 (333)
T cd08296          68 AVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEA-LARI-PDDLDAA-EAAP  144 (333)
T ss_pred             EECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhh-eEeC-CCCCCHH-Hhhh
Confidence            99999999999999985                               27899999999988 9999 9995554 5888


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      ++..+.+||+++.. ..+.++++|+|+| +|++|++++|+|+++|++|+++++++++++.++ ++|+++++++.+. ++.
T Consensus       145 l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~  220 (333)
T cd08296         145 LLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSKE-DVA  220 (333)
T ss_pred             hhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCCc-cHH
Confidence            99999999999965 4899999999999 799999999999999999999999999999998 9999999998775 677


Q ss_pred             HHHHHHCCCCccEEEECCC-chhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchH
Q 019042          218 AALKRCFPEGIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP  296 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  296 (347)
                      +.+.+.  +++|+++|+.| +..+..++++++++|+++.+|....      ....+...++.+++++.++....     .
T Consensus       221 ~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~  287 (333)
T cd08296         221 EALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT-----A  287 (333)
T ss_pred             HHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC-----H
Confidence            777665  35999999986 4788999999999999999987541      12234556678899999886543     5


Q ss_pred             HHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          297 KFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       297 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +.++.++++++++.+++.+ ..++++++.+||+.+.+++..||+|++
T Consensus       288 ~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         288 LDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            6788889999999998765 578999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.2e-38  Score=289.52  Aligned_cols=319  Identities=24%  Similarity=0.272  Sum_probs=258.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcc----cCCCCCCceeec
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFV----ASFNPGEPLSGY   84 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~----~p~v~G~e~~g~   84 (347)
                      |||+++++.  +.|. +.+.+++  +|.|.|..+ ++|+||+.++++|+.|+....+.......    .|.++|||  ++
T Consensus         1 ~~a~~~~~~--~~~~-~~~~~~~--~~~p~~~~~-~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e--~~   72 (341)
T cd08290           1 AKALVYTEH--GEPK-EVLQLES--YEIPPPGPP-NEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNE--GV   72 (341)
T ss_pred             CceEEEccC--CCch-hheEEee--cCCCCCCCC-CEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcc--eE
Confidence            689999888  6663 3455554  566655445 89999999999999999887765422222    57799999  55


Q ss_pred             eEEEEecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                      |+|+++|+++..+++||+|+++    |+|++|+.++.+. ++++ |++++.. +++++++.+.|||+++.....+.+|++
T Consensus        73 G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~  149 (341)
T cd08290          73 GEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADD-LIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQPGDW  149 (341)
T ss_pred             EEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHH-eEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCCCCE
Confidence            6999999999999999999986    7899999999988 9999 9995554 688899999999999987788999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhCCCeeEecCCh--hhHHHHHHHHCCCCccEEEEC
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----EKVNLLKNKFGFDDAFNYKKE--PDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~----~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~~~~~~d~vid~  234 (347)
                      |+|+|++|++|++++|+|++.|++|+++++++    ++.+.++ ++|++++++++..  .++.+.+..++++++|++|||
T Consensus       150 vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~  228 (341)
T cd08290         150 VIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLALNC  228 (341)
T ss_pred             EEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEEEEC
Confidence            99999999999999999999999999998876    6678887 8999998887641  045666776665579999999


Q ss_pred             CCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-----ccchHHHHHHHHHHHHcC
Q 019042          235 VGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKEG  309 (347)
Q Consensus       235 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~g  309 (347)
                      +|+..+..++++++++|+++.+|.....     ....+....+.+++++.+.....+     +......++++++++.++
T Consensus       229 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (341)
T cd08290         229 VGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREG  303 (341)
T ss_pred             cCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcC
Confidence            9998888899999999999999864321     112344456788999998876542     233445788899999999


Q ss_pred             Ccccccceee---ccccHHHHHHHhHcCCCcceEEEEe
Q 019042          310 KLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       310 ~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .+.+.....+   ++++++++++.+.++...||+|+++
T Consensus       304 ~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         304 KLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             CccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            9987766677   9999999999999988899999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=3.7e-38  Score=291.65  Aligned_cols=321  Identities=17%  Similarity=0.186  Sum_probs=257.3

Q ss_pred             ccccccceEEEee--ccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC---------Ccc
Q 019042            4 EEAVSNKQVILSN--YVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP---------SFV   72 (347)
Q Consensus         4 ~~~~~~~a~~~~~--~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~---------~~~   72 (347)
                      .++.+||||++..  +  +.|. +.+++.  ++|.|.+ ++ +||+||+.++++|.+|.....+....         ...
T Consensus         3 ~~~~~~~a~~~~~~~~--~~~~-~~~~~~--~~~~p~l-~~-~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~   75 (398)
T TIGR01751         3 VVPETMYAFAIREERD--GDPR-QAIQLE--VVPVPEL-GP-GEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDD   75 (398)
T ss_pred             ccchhhhheEEecccC--CCcc-cceEEe--ecCCCCC-CC-CeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCC
Confidence            4677899999965  5  6553 345554  4677765 67 99999999999999887654432100         001


Q ss_pred             cC-CCCCCceeeceEEEEecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCc
Q 019042           73 AS-FNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQH  120 (347)
Q Consensus        73 ~p-~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~  120 (347)
                      .| .++|||  +.|+|+++|++++.+++||+|+++                               |+|++|++++++. 
T Consensus        76 ~~~~v~G~e--~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~-  152 (398)
T TIGR01751        76 LPFHIIGSD--ASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQ-  152 (398)
T ss_pred             CCceecccc--eEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHH-
Confidence            23 379999  556999999999999999999863                               7899999999988 


Q ss_pred             ceeccCCCCCccccccccCCchhhHHHHhhh--hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 019042          121 LIKILDTNVPLSYYTGILGMPGLTAYGGLYE--LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLL  198 (347)
Q Consensus       121 ~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~  198 (347)
                      ++++ |++++.. +++.++..+.+||+++..  ..++.+|++|+|+|++|++|++++|+|++.|++++++++++++.+.+
T Consensus       153 ~~~v-P~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       153 LMPK-PKHLTWE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             eEEC-CCCCCHH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            9999 9995554 577888999999999865  46788999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCeeEecCCh---------------------hhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEE
Q 019042          199 KNKFGFDDAFNYKKE---------------------PDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       199 ~~~~g~~~vi~~~~~---------------------~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~  256 (347)
                      + ++|++.++|+++.                     ..+.+.+.+++.+ ++|++|||+|...+..++++++++|+++.+
T Consensus       231 ~-~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~  309 (398)
T TIGR01751       231 R-ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVIC  309 (398)
T ss_pred             H-HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEE
Confidence            9 8999999987542                     0245567777765 899999999988889999999999999999


Q ss_pred             cccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCC
Q 019042          257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQN  336 (347)
Q Consensus       257 g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~  336 (347)
                      |.....+     ...+...++.++.++.++....     .+.+++++++++++.+.+.+++++++++++++++.+.++..
T Consensus       310 g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~  379 (398)
T TIGR01751       310 GGTTGYN-----HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHH  379 (398)
T ss_pred             ccccCCC-----CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCC
Confidence            8764321     1233445556677777665443     34578899999999999888889999999999999999999


Q ss_pred             cceEEEEeCCC
Q 019042          337 VGKQLVVVAPE  347 (347)
Q Consensus       337 ~gkivi~~~~~  347 (347)
                      .||+|+.+..+
T Consensus       380 ~gkvvv~~~~~  390 (398)
T TIGR01751       380 QGNVAVLVLAP  390 (398)
T ss_pred             CceEEEEeCCC
Confidence            99999998653

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-38  Score=284.06  Aligned_cols=321  Identities=22%  Similarity=0.259  Sum_probs=261.3

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      ||||+++.++  +.+  ..+.+++  .+.|.+ .+ +||+||+.++++|+.|.....+........|.++|||++  |+|
T Consensus         1 ~m~a~~~~~~--~~~--~~~~~~~--~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~--G~v   70 (334)
T PTZ00354          1 MMRAVTLKGF--GGV--DVLKIGE--SPKPAP-KR-NDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVA--GYV   70 (334)
T ss_pred             CcEEEEEEec--CCC--cceEEEe--CCCCCC-CC-CEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeE--EEE
Confidence            5799999887  555  3345544  455544 77 999999999999999987776644322334678999955  599


Q ss_pred             EEecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042           88 KVLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                      +++|++++.+++||+|+++   |+|++|++++.+. ++++ |++++.. ++++++..+.+||+++.....+.+|++|+|+
T Consensus        71 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~  147 (334)
T PTZ00354         71 EDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGH-VMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKGQSVLIH  147 (334)
T ss_pred             EEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHH-cEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            9999999999999999997   7999999999988 9999 9995544 5788999999999999887899999999999


Q ss_pred             cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh-HHHHHHHHCCC-CccEEEECCCchhHHH
Q 019042          165 AASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD-LDAALKRCFPE-GIDIYFENVGGKMLDA  242 (347)
Q Consensus       165 ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~i~~~~~~-~~d~vid~~g~~~~~~  242 (347)
                      |++|++|++++++|++.|++++++++++++.+.++ ++|+++++++... + +.+.+++.+++ ++|++|||.++..+..
T Consensus       148 ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~  225 (334)
T PTZ00354        148 AGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVGGSYLSE  225 (334)
T ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCchHHHHH
Confidence            99999999999999999999888999999999998 8999888888765 4 78888888766 8999999999888999


Q ss_pred             HHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-----ccchHHHHHHHHHHHHcCCcccccce
Q 019042          243 VLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKEGKLVYVEDI  317 (347)
Q Consensus       243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~  317 (347)
                      ++++++++|+++.++...+...    ...+...++.++.++.++.....     +....+.++++++++.++.+.+.+..
T Consensus       226 ~~~~l~~~g~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  301 (334)
T PTZ00354        226 TAEVLAVDGKWIVYGFMGGAKV----EKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDR  301 (334)
T ss_pred             HHHHhccCCeEEEEecCCCCcc----cccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCcccc
Confidence            9999999999999986432211    11344555667778877655432     12223456788899999999887778


Q ss_pred             eeccccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          318 AEGLEKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       318 ~~~~~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      .+++++++++++.+.++...||+++.+.++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~  331 (334)
T PTZ00354        302 TYPLEEVAEAHTFLEQNKNIGKVVLTVNEP  331 (334)
T ss_pred             EEcHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            899999999999999888889999998764

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=8.9e-38  Score=281.84  Aligned_cols=315  Identities=22%  Similarity=0.262  Sum_probs=259.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~g~G~   86 (347)
                      |||++++++  +.+  ..+.+.  +.+.|.+ .+ ++|+||++++++|+.|+....+....  ...+|.++|||  ++|+
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~--~~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e--~~G~   70 (324)
T cd08244           1 MRAIRLHEF--GPP--EVLVPE--DVPDPVP-GP-GQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGE--VAGV   70 (324)
T ss_pred             CeEEEEcCC--CCc--cceEEe--ccCCCCC-CC-CEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccc--eEEE
Confidence            589999776  555  334443  4555544 77 99999999999999998777664321  23457889999  4559


Q ss_pred             EEEecCCCCCCCCCCEEEec-----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEE
Q 019042           87 SKVLDSTHPNYKKDDLVWGL-----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYV  161 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~-----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~v  161 (347)
                      |+++|++++.+++||+|+++     |+|++|++++.+. ++++ |++++.. ++++++..+.|||. +.....++++++|
T Consensus        71 v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~a~~~~~~~~ta~~-~~~~~~~~~~~~v  146 (324)
T cd08244          71 VDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDS-LHPV-PDGLDLE-AAVAVVHDGRTALG-LLDLATLTPGDVV  146 (324)
T ss_pred             EEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHH-eEeC-CCCCCHH-HHhhhcchHHHHHH-HHHhcCCCCCCEE
Confidence            99999999999999999985     7899999999988 9999 9995554 58889999999964 4466889999999


Q ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhH
Q 019042          162 YVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKML  240 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~  240 (347)
                      +|+|++|++|++++++|++.|++|+++++++++.+.++ ++|+++++++.+. ++.+.+.+.+++ ++|+++||+|+...
T Consensus       147 lI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~  224 (324)
T cd08244         147 LVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGVGGAIG  224 (324)
T ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECCChHhH
Confidence            99999999999999999999999999999999999997 8999888888776 778888887776 89999999999878


Q ss_pred             HHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccccceee
Q 019042          241 DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       241 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      ..++++++++|+++.+|.....    . ...+....+.+++++.+...... +....+.++++++++.++.+.+.+...+
T Consensus       225 ~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  299 (324)
T cd08244         225 RAALALLAPGGRFLTYGWASGE----W-TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTF  299 (324)
T ss_pred             HHHHHHhccCcEEEEEecCCCC----C-CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEE
Confidence            9999999999999999875321    1 12333455678888888766443 3344677888999999999987777889


Q ss_pred             ccccHHHHHHHhHcCCCcceEEEEe
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +++++++|++.+.++...||+++++
T Consensus       300 ~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         300 PLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             eHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999999999999988999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=5.1e-38  Score=287.57  Aligned_cols=310  Identities=20%  Similarity=0.280  Sum_probs=253.0

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceE
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~   86 (347)
                      |+|||+++.++  +.+    +++++  ++.|.+ ++ +||+||+.++++|++|+....+.+.  ..+|.++|||++  |+
T Consensus         1 ~~~~a~~~~~~--~~~----~~~~~--~~~p~~-~~-~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~--G~   66 (365)
T cd08278           1 MKTTAAVVREP--GGP----FVLED--VELDDP-RP-DEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGA--GV   66 (365)
T ss_pred             CccEEeeeccC--CCc----ceEEE--eecCCC-CC-CeEEEEEEEeecCcccHHHhcCCCC--CCCCccccccee--EE
Confidence            68899999886  444    45554  555645 67 9999999999999999988877542  346889999954  59


Q ss_pred             EEEecCCCCCCCCCCEEEe----------------------------------------------------ccCcceeEe
Q 019042           87 SKVLDSTHPNYKKDDLVWG----------------------------------------------------LTSWEEYSL  114 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~----------------------------------------------------~g~~~~~~~  114 (347)
                      |+++|++++.+++||+|++                                                    .|+|++|++
T Consensus        67 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~  146 (365)
T cd08278          67 VEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAV  146 (365)
T ss_pred             EEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEE
Confidence            9999999999999999983                                                    268899999


Q ss_pred             ecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Q 019042          115 IQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKE  193 (347)
Q Consensus       115 ~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~  193 (347)
                      ++++. ++++ |++++.. +++.+++.+.+||.++.....++++++|+|+| +|++|++++|+|++.|+ +|++++++++
T Consensus       147 v~~~~-~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~  222 (365)
T cd08278         147 VHERN-VVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDS  222 (365)
T ss_pred             ecchh-EEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence            99998 9999 9996544 58899999999999988888999999999997 59999999999999999 6889999999


Q ss_pred             HHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccc
Q 019042          194 KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHN  272 (347)
Q Consensus       194 ~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  272 (347)
                      +.+.++ ++|+++++++++. ++.+.+.+.+++++|+++||+|+ ..+..++++++++|+++.+|.....    .....+
T Consensus       223 k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~  296 (365)
T cd08278         223 RLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEVTLD  296 (365)
T ss_pred             HHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----CccccC
Confidence            999888 8999999998775 78888888774489999999986 6889999999999999999875311    112334


Q ss_pred             hHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc-ccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          273 LMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY-VEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       273 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      ...++.+++++.++.....  ...+.+++++++++++.+++ .+...++++++.+|++.+.+++.. |++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         297 VNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             HHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            5555578888887765332  11467788999999999864 345678999999999999887654 88774

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9.7e-38  Score=283.63  Aligned_cols=308  Identities=21%  Similarity=0.216  Sum_probs=255.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  + +  ..+++++  +|.|.+ ++ +||+||+.++++|+.|.....+........|.++|||  ++|+|+
T Consensus         1 m~a~~~~~~--~-~--~~~~~~~--~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e--~~G~V~   69 (341)
T cd08297           1 MKAAVVEEF--G-E--KPYEVKD--VPVPEP-GP-GEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHE--GAGVVV   69 (341)
T ss_pred             CceEEeecc--C-C--CCceEEE--eeCCCC-CC-CeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcc--cceEEE
Confidence            689999887  5 2  3455544  666655 77 9999999999999999887776543333447789999  556999


Q ss_pred             EecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      .+|++++.+++||+|++                               .|+|++|++++++. ++++ |++++.. ++++
T Consensus        70 ~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~-~~~l-p~~~~~~-~~a~  146 (341)
T cd08297          70 AVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARY-VTPI-PDGLSFE-QAAP  146 (341)
T ss_pred             EeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEecccc-EEEC-CCCCCHH-HHHH
Confidence            99999999999999986                               36899999999999 9999 9995554 5888


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      ++..+.|||+++.. .+++++++|+|+|+.+++|++++++|++.|++|+++++++++.+.++ ++|+++++++.+. ++.
T Consensus       147 l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~  223 (341)
T cd08297         147 LLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKKS-DDV  223 (341)
T ss_pred             HHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCCc-cHH
Confidence            99999999999866 58999999999999888999999999999999999999999999997 8999999998876 788


Q ss_pred             HHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccch
Q 019042          218 AALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY  295 (347)
Q Consensus       218 ~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  295 (347)
                      +.+.+.+++ ++|+++|+.++ .....++++++++|+++.+|.....     ....+...+..+++++.+.....     
T Consensus       224 ~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----  293 (341)
T cd08297         224 EAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVLRGITIVGSLVGT-----  293 (341)
T ss_pred             HHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHhcccEEEEeccCC-----
Confidence            888888765 89999997765 7889999999999999999865421     11234455667888888754433     


Q ss_pred             HHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          296 PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       296 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .+.+++++++++++.+++.+ ..|++++++++++.+..+...||+++++
T Consensus       294 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         294 RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            57889999999999997644 5789999999999999998999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=7.9e-38  Score=284.11  Aligned_cols=304  Identities=22%  Similarity=0.249  Sum_probs=251.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC--CCcccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK--PSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~--~~~~~p~v~G~e~~g~G~   86 (347)
                      |||++++++  +.+    +++.+  ++.|.+ .+ ++|+||+.++++|++|+....+.+.  ....+|.++|||  ++|+
T Consensus         1 ~ka~~~~~~--~~~----~~~~~--~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e--~~G~   68 (340)
T cd05284           1 MKAARLYEY--GKP----LRLED--VPVPEP-GP-GQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHE--NAGW   68 (340)
T ss_pred             CeeeEeccC--CCC----ceEEe--CCCCCC-CC-CeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccc--eeEE
Confidence            589999887  544    45544  566655 67 9999999999999999988777543  234557899999  5569


Q ss_pred             EEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccc
Q 019042           87 SKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa  136 (347)
                      |.++|++++.+++||+|+++                              |+|++|++++++. ++++ |++++.. +++
T Consensus        69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-P~~ls~~-~aa  145 (340)
T cd05284          69 VEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRR-LVKL-PRGLDPV-EAA  145 (340)
T ss_pred             EEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHH-eEEC-CCCCCHH-Hhh
Confidence            99999999999999999864                              5899999999998 9999 9995544 688


Q ss_pred             ccCCchhhHHHHhhhh-cCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCeeEecCChh
Q 019042          137 ILGMPGLTAYGGLYEL-CSPKKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEP  214 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~-~~~~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~  214 (347)
                      +++..+.|||+++... ..+.++++|+|+|+ |++|++++|+|+..| .+|+++++++++.+.++ ++|+++++++++  
T Consensus       146 ~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--  221 (340)
T cd05284         146 PLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNASD--  221 (340)
T ss_pred             hhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcCCc--
Confidence            9999999999999765 46888999999995 779999999999999 79999999999999998 999999888876  


Q ss_pred             hHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccc
Q 019042          215 DLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY  292 (347)
Q Consensus       215 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  292 (347)
                      ++..++++++++ ++|+++||+|+ ..+..++++++++|+++.+|.....       ..+....+.+++++.++....  
T Consensus       222 ~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~--  292 (340)
T cd05284         222 DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHG-------RLPTSDLVPTEISVIGSLWGT--  292 (340)
T ss_pred             cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCC-------ccCHHHhhhcceEEEEEeccc--
Confidence            367778887776 89999999996 7889999999999999999864321       122333456888888776543  


Q ss_pred             cchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          293 HQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                         .+.+++++++++++.+++ ....|+++++++|++.+.+++..||+++.+
T Consensus       293 ---~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         293 ---RAELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             ---HHHHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence               567889999999999886 445789999999999999998899999753

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.2e-37  Score=281.75  Aligned_cols=321  Identities=29%  Similarity=0.482  Sum_probs=259.8

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      +||||++.++....+  +.+++++  ++.|.+ .+ +||+||+.++++|+.|+....+.......+|.++|||++  |+|
T Consensus         1 ~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~-~~-~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~--G~v   72 (329)
T cd08250           1 SFRKLVVHRLSPNFR--EATSIVD--VPVPLP-GP-GEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGV--GEV   72 (329)
T ss_pred             CceEEEeccCCCCcc--cCceEEe--cCCCCC-CC-CEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeE--EEE
Confidence            479999999833224  3355555  566655 67 999999999999999998777654333457889999954  599


Q ss_pred             EEecCCCCCCCCCCEEEec--cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           88 KVLDSTHPNYKKDDLVWGL--TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~~--g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      +.+|++++.+++||+|+++  |+|++|+.++.+. ++++ |++  .. ++++++..+.+||+++.....+.++++++|+|
T Consensus        73 ~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~-~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g  147 (329)
T cd08250          73 VAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARH-AVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGETVLVTA  147 (329)
T ss_pred             EEECCCCCCCCCCCEEEEecCcceeEEEEechHH-eEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCCEEEEEe
Confidence            9999999999999999986  8999999999988 9999 987  44 67889999999999998878999999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL  245 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~  245 (347)
                      ++|++|++++|+|++.|++|+++++++++.+.++ ++|++.+++..+. ++.+.+.+..++++|++||++|+..+..+++
T Consensus       148 a~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~  225 (329)
T cd08250         148 AAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVD  225 (329)
T ss_pred             CccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHHHHHHHH
Confidence            9999999999999999999999999999999998 8999888887765 6777777665558999999999888899999


Q ss_pred             hhccCCEEEEEcccccccCCCC----ccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccc--cceee
Q 019042          246 NMRIHGRIAVCGMISQYNLEKP----EGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV--EDIAE  319 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~  319 (347)
                      +++++|+++.+|..........    .........+.+++++.++....+.....+.+.++.+++.++.+.+.  ....+
T Consensus       226 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  305 (329)
T cd08250         226 NLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFR  305 (329)
T ss_pred             HhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcccc
Confidence            9999999999987543210000    00111234567888988887655433356778899999999998874  34457


Q ss_pred             ccccHHHHHHHhHcCCCcceEEEE
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++++++|++.+.++...||++++
T Consensus       306 ~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         306 GLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             CHHHHHHHHHHHHcCCCCceEEeC
Confidence            999999999999988888999874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=1.1e-37  Score=281.77  Aligned_cols=324  Identities=47%  Similarity=0.777  Sum_probs=257.4

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC--CCcccCCCCCCceeece
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK--PSFVASFNPGEPLSGYG   85 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~--~~~~~p~v~G~e~~g~G   85 (347)
                      ++|||++++.+.+.|.++.+++++  +|.|.+ ++ ++|+||+.++++|++|+....+...  .....+.++|+|  ++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~-~~-~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e--~~G   74 (329)
T cd05288           1 SNRQVVLAKRPEGPPPPDDFELVE--VPLPEL-KD-GEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGG--GVG   74 (329)
T ss_pred             CCcEEEEeccCCCCCCccceeEEe--ccCCCC-CC-CeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCc--eEE
Confidence            479999999866666667777766  555655 77 9999999999999987655444211  111224678888  556


Q ss_pred             EEEEecCCCCCCCCCCEEEeccCcceeEeecC-CCcceeccCCCCC--ccccccccCCchhhHHHHhhhhcCCCCCCEEE
Q 019042           86 VSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQS-PQHLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELCSPKKGEYVY  162 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~-~~~~~~i~P~~~~--~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vl  162 (347)
                      +|+++|+.  ++++||+|+++++|++|+.++. +. ++++ |++++  ....++++++.+.+||+++.....+.++++|+
T Consensus        75 ~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~-~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vl  150 (329)
T cd05288          75 EVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASG-LRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVV  150 (329)
T ss_pred             EEEecCCC--CCCCCCEEecccceEEEEEecchhh-cEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEE
Confidence            99999964  7999999999999999999999 88 9999 99853  22123448999999999998778899999999


Q ss_pred             EEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHH
Q 019042          163 VSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDA  242 (347)
Q Consensus       163 I~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~  242 (347)
                      |+|++|++|++++|+|++.|++|+++++++++.+.+++.+|+++++++.+. ++.+.+.+.+++++|++|||+|+..+..
T Consensus       151 I~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~~~~~~  229 (329)
T cd05288         151 VSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGEILDA  229 (329)
T ss_pred             EecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchHHHHHH
Confidence            999999999999999999999999999999999999833999889998876 7888888777568999999999988999


Q ss_pred             HHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeeccc
Q 019042          243 VLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLE  322 (347)
Q Consensus       243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  322 (347)
                      ++++++++|+++.+|..............+....+.+++++.+.....+.....+.+.++.+++.++.+++.....++++
T Consensus       230 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~  309 (329)
T cd05288         230 ALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLE  309 (329)
T ss_pred             HHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHH
Confidence            99999999999999865432100000012345566788888887665443334567888999999999987766678999


Q ss_pred             cHHHHHHHhHcCCCcceEEE
Q 019042          323 KAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       323 ~~~~a~~~~~~~~~~gkivi  342 (347)
                      ++.++++.+.+++..||+++
T Consensus       310 ~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         310 NAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHHHHHhcCCCccceeC
Confidence            99999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.5e-38  Score=284.72  Aligned_cols=307  Identities=20%  Similarity=0.211  Sum_probs=249.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC-------------------C
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK-------------------P   69 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~-------------------~   69 (347)
                      |||+++.++  +.+  +.+.+.+ +++.|.+ .+ ++|+||+.++++|++|.....+.+.                   .
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~-~~~~~~~-~~-~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   73 (350)
T cd08274           1 MRAVLLTGH--GGL--DKLVYRD-DVPVPTP-AP-GEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGG   73 (350)
T ss_pred             CeEEEEecc--CCc--cceeecc-cCCCCCC-CC-CeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccC
Confidence            588988876  555  2344432 2455545 67 9999999999999999887765431                   1


Q ss_pred             CcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec----------------------cCcceeEeecCCCcceeccCC
Q 019042           70 SFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL----------------------TSWEEYSLIQSPQHLIKILDT  127 (347)
Q Consensus        70 ~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~----------------------g~~~~~~~~~~~~~~~~i~P~  127 (347)
                      ...+|.++|||  ++|+|+.+|++++++++||+|++.                      |+|++|+.++.+. ++++ |+
T Consensus        74 ~~~~p~~~G~e--~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~  149 (350)
T cd08274          74 TLSFPRIQGAD--IVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAEN-AYPV-NS  149 (350)
T ss_pred             CCCCCcccCCc--ceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHH-ceeC-CC
Confidence            34568999999  556999999999999999999872                      7899999999988 9999 99


Q ss_pred             CCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee
Q 019042          128 NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA  207 (347)
Q Consensus       128 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v  207 (347)
                      +++.. +++++++.+.+||+++ ....+.+|++|+|+|++|++|++++++|+++|++|+++++++ +.+.++ ++|++.+
T Consensus       150 ~~~~~-~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~  225 (350)
T cd08274         150 PLSDV-ELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTV  225 (350)
T ss_pred             CCCHH-HHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEE
Confidence            95554 6889999999999998 667899999999999999999999999999999999998766 778888 8998766


Q ss_pred             EecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeee
Q 019042          208 FNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGF  286 (347)
Q Consensus       208 i~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  286 (347)
                      ++.+.. .+.+  ...+.+ ++|++|||+|+..+..++++++++|+++.+|....     .....+...++.+++++.++
T Consensus       226 ~~~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~  297 (350)
T cd08274         226 ILRDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGS  297 (350)
T ss_pred             EeCCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEe
Confidence            665443 4433  445554 89999999999889999999999999999986421     11233455667788888887


Q ss_pred             EecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          287 LAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      ....     .+.++++++++.++++++.+...++++++++|++.+.++...||++++
T Consensus       298 ~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         298 TLGT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             ecCC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence            7643     577899999999999988778889999999999999988888999985

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.2e-37  Score=282.36  Aligned_cols=310  Identities=17%  Similarity=0.190  Sum_probs=246.9

Q ss_pred             ceEEEeecc-CCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042           10 KQVILSNYV-TGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus        10 ~a~~~~~~~-~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++.++. .+.|.    .++..++|.|.+ ++ +||+||++++++|+.|.....+... ...+|.++|+|+  +|+|+
T Consensus         1 ~~~~~~~~~~~~~~~----~~~~~~~~~p~~-~~-~ev~Ikv~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~--~G~V~   71 (336)
T TIGR02817         1 KAVGYKKPLPITDPD----ALVDIDLPKPKP-GG-RDLLVEVKAISVNPVDTKVRARMAP-EAGQPKILGWDA--AGVVV   71 (336)
T ss_pred             CceeeccccCCCCcc----cceecccCCCCC-CC-CEEEEEEEEEEcChHHHHHHcCCCC-CCCCCcccceee--EEEEE
Confidence            678888741 13342    455556788866 77 9999999999999999877766432 234578899994  45999


Q ss_pred             EecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCC-----
Q 019042           89 VLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKK-----  157 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~-----  157 (347)
                      ++|++++.+++||+|+++      |+|++|++++++. ++++ |++++.. +++++++.+.|||+++....++.+     
T Consensus        72 ~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~  148 (336)
T TIGR02817        72 AVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERI-VGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGINDPVAGD  148 (336)
T ss_pred             EeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHH-cccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence            999999999999999985      6899999999998 9999 9995544 688999999999999977788877     


Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      |++|+|+|++|++|++++|+|++. |++|+++++++++.+.++ ++|+++++++..  ++.+.+++..++++|+++|+++
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd~vl~~~~  225 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVSYVFSLTH  225 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCCEEEEcCC
Confidence            999999999999999999999998 999999999999999998 899999998754  6777787754448999999985


Q ss_pred             c-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEec--c-c--ccch--HHHHHHHHHHHHc
Q 019042          237 G-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG--D-F--YHQY--PKFLELVMPAIKE  308 (347)
Q Consensus       237 ~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~-~--~~~~--~~~~~~~~~~~~~  308 (347)
                      + ..+..++++++++|+++.++...         ..+...+..+++++.+....  . +  +...  .+.++++++++.+
T Consensus       226 ~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  296 (336)
T TIGR02817       226 TDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDA  296 (336)
T ss_pred             cHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHC
Confidence            4 78899999999999999874321         12333344455666654332  1 1  1111  2568899999999


Q ss_pred             CCcccccceee---ccccHHHHHHHhHcCCCcceEEEE
Q 019042          309 GKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       309 g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +.+++.+...+   +++++++|++.+.+++..||+++.
T Consensus       297 ~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       297 GKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             CCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            99987666555   468999999999999888999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=2.8e-37  Score=281.59  Aligned_cols=306  Identities=17%  Similarity=0.184  Sum_probs=251.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC-----------CcccCCCC
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP-----------SFVASFNP   77 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~-----------~~~~p~v~   77 (347)
                      |||+++..+  +.+    ++++  ++|.|.+ ++ +||+||+.++++|++|+....+.+..           ....|.++
T Consensus         1 ~~a~~~~~~--~~~----~~~~--~~~~p~~-~~-~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   70 (350)
T cd08240           1 MKAAAVVEP--GKP----LEEV--EIDTPKP-PG-TEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVL   70 (350)
T ss_pred             CeeEEeccC--CCC----ceEE--ecCCCCC-CC-CeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCccc
Confidence            688988776  544    3444  5677765 77 99999999999999998877764321           23446889


Q ss_pred             CCceeeceEEEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCC
Q 019042           78 GEPLSGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDT  127 (347)
Q Consensus        78 G~e~~g~G~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~  127 (347)
                      |||  ++|+|+++|++++++++||+|+++                              |++++|+.++.+. ++++ |+
T Consensus        71 g~e--~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~  146 (350)
T cd08240          71 GHE--IVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSR-YLVD-PG  146 (350)
T ss_pred             ccc--eeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHH-eeeC-CC
Confidence            999  556999999999999999999864                              6899999999998 9999 99


Q ss_pred             CCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCe
Q 019042          128 NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDD  206 (347)
Q Consensus       128 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~  206 (347)
                      +++.. +++++++.+.+||+++.....+.++++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.++ ++|++.
T Consensus       147 ~~s~~-~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~  223 (350)
T cd08240         147 GLDPA-LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADV  223 (350)
T ss_pred             CCCHH-HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcE
Confidence            95554 68889999999999998776777899999996 69999999999999999 7999999999999998 899988


Q ss_pred             eEecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeee
Q 019042          207 AFNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEG  285 (347)
Q Consensus       207 vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  285 (347)
                      ++++.+. ++.+.+.+..++++|++||+.|. ..+..++++|+++|+++.+|.....      ...+......+++++.+
T Consensus       224 ~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~  296 (350)
T cd08240         224 VVNGSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQG  296 (350)
T ss_pred             EecCCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEE
Confidence            8887765 67777777665589999999985 6889999999999999999875421      11222333447888877


Q ss_pred             eEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          286 FLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      .....     .+.+.+++++++++.+++.....++++++++|++.+.+++..||++++
T Consensus       297 ~~~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         297 SYVGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             cccCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            76554     467888999999999987777789999999999999998888999985

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=2.2e-37  Score=279.15  Aligned_cols=313  Identities=23%  Similarity=0.297  Sum_probs=258.5

Q ss_pred             EEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEecC
Q 019042           13 ILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDS   92 (347)
Q Consensus        13 ~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~vG~   92 (347)
                      +++++  +.|.++++.+++  .|.|.+ ++ ++|+||+.++++|+.|...+.+.......+|.++|||  +.|+|+.+|+
T Consensus         2 ~~~~~--~~~~~~~~~~~~--~~~~~~-~~-~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e--~~G~v~~~G~   73 (323)
T cd05282           2 VYTQF--GEPLPLVLELVS--LPIPPP-GP-GEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNE--GVGVVVEVGS   73 (323)
T ss_pred             eeCcC--CCCccceEEeEe--CCCCCC-CC-CeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcc--eEEEEEEeCC
Confidence            34455  666434555555  566655 67 9999999999999999887766543334457899999  4569999999


Q ss_pred             CCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCCh
Q 019042           93 THPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGA  169 (347)
Q Consensus        93 ~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~  169 (347)
                      +++.+++||+|+++   |+|++|+.++... ++++ |++++.. +++.++..+.+||+++.....+.+|++|+|+|++|+
T Consensus        74 ~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~  150 (323)
T cd05282          74 GVSGLLVGQRVLPLGGEGTWQEYVVAPADD-LIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSA  150 (323)
T ss_pred             CCCCCCCCCEEEEeCCCCcceeEEecCHHH-eEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccH
Confidence            99999999999996   7899999999988 9999 9995544 577888999999999988888899999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhc
Q 019042          170 VGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMR  248 (347)
Q Consensus       170 vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~  248 (347)
                      +|++++|+|+++|++++++++++++++.++ ++|+++++++.+. ++.+.+.+.+++ ++|++|||.|+.....++++++
T Consensus       151 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~  228 (323)
T cd05282         151 VGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGGESATRLARSLR  228 (323)
T ss_pred             HHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhC
Confidence            999999999999999999999999999998 8999999988775 778888888876 8999999999987788899999


Q ss_pred             cCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-----ccchHHHHHHHHHHHHcCCcccccceeecccc
Q 019042          249 IHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEK  323 (347)
Q Consensus       249 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  323 (347)
                      ++|+++.+|.....     ....+...+..+++++.+.....+     +..+.+.++++++++.++.+.+.+...+++++
T Consensus       229 ~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~  303 (323)
T cd05282         229 PGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLED  303 (323)
T ss_pred             CCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHH
Confidence            99999999875431     112334444448899888876553     23455678889999999999887788899999


Q ss_pred             HHHHHHHhHcCCCcceEEEE
Q 019042          324 APSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       324 ~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++|++.+.++...||++++
T Consensus       304 ~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         304 FEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHHHHHHhcCCCCceEeeC
Confidence            99999999988888999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.7e-37  Score=279.06  Aligned_cols=315  Identities=20%  Similarity=0.176  Sum_probs=251.9

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      +||++++.++  |.|  .++.+  .++|.|.+ ++ +||+||+.++++|++|+....+.+.. ..+|.++|||  +.|+|
T Consensus         1 ~~~~~~~~~~--~~~--~~~~~--~~~~~~~~-~~-~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e--~~G~v   69 (327)
T PRK10754          1 MAKRIEFHKH--GGP--EVLQA--VEFTPADP-AE-NEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTE--AAGVV   69 (327)
T ss_pred             CceEEEEecc--CCh--hHeEE--eeccCCCC-CC-CEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcc--eEEEE
Confidence            4699999888  777  34444  44666755 77 99999999999999999877765422 2357889999  55699


Q ss_pred             EEecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEE
Q 019042           88 KVLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYV  163 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI  163 (347)
                      +.+|++++.+++||+|++.    |+|++|+.++.+. ++++ |++++.. ++++++..+.+||.++.....+.+|++|+|
T Consensus        70 ~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~-~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI  146 (327)
T PRK10754         70 SKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADK-AAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLF  146 (327)
T ss_pred             EEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHH-ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCCCCEEEE
Confidence            9999999999999999864    7899999999988 9999 9995554 577788899999999887788999999999


Q ss_pred             EcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHH
Q 019042          164 SAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDA  242 (347)
Q Consensus       164 ~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~  242 (347)
                      +|++|.+|++++|+|+.+|++|+++++++++.+.++ ++|++++++.++. ++.+.+++.+++ ++|++|||+|+..+..
T Consensus       147 ~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~  224 (327)
T PRK10754        147 HAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVGKDTWEA  224 (327)
T ss_pred             EeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCcHHHHHH
Confidence            999999999999999999999999999999999998 8999888888775 788888888876 8999999999888889


Q ss_pred             HHHhhccCCEEEEEcccccccCCCCccccchHHHHhcccee-eeeEe-c--ccccchHHHHHHHHHHHHcCCcccc--cc
Q 019042          243 VLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRM-EGFLA-G--DFYHQYPKFLELVMPAIKEGKLVYV--ED  316 (347)
Q Consensus       243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~--~~~~~~~~~~~~~~~~~~~g~~~~~--~~  316 (347)
                      ++++++++|+++.+|.....     ....+...+..++..+ ..... .  ..+....+.++.+++++.+|.+++.  ..
T Consensus       225 ~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~  299 (327)
T PRK10754        225 SLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQ  299 (327)
T ss_pred             HHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccC
Confidence            99999999999999875421     1111222222222111 11111 1  1122345567789999999999854  46


Q ss_pred             eeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          317 IAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       317 ~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +.|++++++++++.+.++...||+|+.
T Consensus       300 ~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        300 QKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             cEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            788999999999999999889999985

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.8e-37  Score=278.48  Aligned_cols=308  Identities=20%  Similarity=0.241  Sum_probs=254.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||||++.++  +.|    +.++  ++|.|.+ .+ ++|+||+.++++|+.|+....+.... ..+|.++|+|  ++|+|+
T Consensus         1 m~a~~~~~~--~~~----~~~~--~~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e--~~G~V~   67 (345)
T cd08260           1 MRAAVYEEF--GEP----LEIR--EVPDPEP-PP-DGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHE--FAGVVV   67 (345)
T ss_pred             CeeEEEecC--CCC----cEEE--EccCCCC-CC-CeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccc--eeEEEE
Confidence            699999887  554    4454  4666655 66 99999999999999998887775432 3457899999  556999


Q ss_pred             EecCCCCCCCCCCEEEe------------------------------ccCcceeEeecCC--CcceeccCCCCCcccccc
Q 019042           89 VLDSTHPNYKKDDLVWG------------------------------LTSWEEYSLIQSP--QHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~------------------------------~g~~~~~~~~~~~--~~~~~i~P~~~~~~~~aa  136 (347)
                      .+|++++.+++||+|++                              .|+|++|+.+++.  . ++++ |++++.. +++
T Consensus        68 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~i-P~~~~~~-~aa  144 (345)
T cd08260          68 EVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVN-LVRL-PDDVDFV-TAA  144 (345)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCc-eEEC-CCCCCHH-Hhh
Confidence            99999999999999986                              3789999999975  6 9999 9995554 588


Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCC-hhh
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKK-EPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~  215 (347)
                      .++..+.+||+++...+++.++++|+|+| +|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++ . +
T Consensus       145 ~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~  221 (345)
T cd08260         145 GLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEVE-D  221 (345)
T ss_pred             hhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEccccch-h
Confidence            88999999999997778899999999999 699999999999999999999999999999998 899999999876 5 7


Q ss_pred             HHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ  294 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  294 (347)
                      +.+.+..++++++|++|||+|+ ..+..++++++++|+++.+|.......   ....+...++.+++++.+.....    
T Consensus       222 ~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----  294 (345)
T cd08260         222 VAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVARELEIVGSHGMP----  294 (345)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhhcccEEEeCCcCC----
Confidence            8788887776589999999985 688899999999999999987542210   01233444557788888765433    


Q ss_pred             hHHHHHHHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          295 YPKFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       295 ~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                       .+.+++++++++++.+.+.  +...++++++++|++.+.++...||+|++
T Consensus       295 -~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         295 -AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             -HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence             5678889999999998754  56788999999999999999989998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.3e-37  Score=281.96  Aligned_cols=307  Identities=23%  Similarity=0.264  Sum_probs=253.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||||++.++  +.+    +.++  +.|.|.+ ++ +||+||+.++++|+.|+....+...  ..+|.++|||  +.|+|+
T Consensus         1 ~~a~~~~~~--~~~----~~~~--~~~~~~~-~~-~~v~v~v~~~~l~~~d~~~~~~~~~--~~~p~~~g~e--~~G~v~   66 (367)
T cd08263           1 MKAAVLKGP--NPP----LTIE--EIPVPRP-KE-GEILIRVAACGVCHSDLHVLKGELP--FPPPFVLGHE--ISGEVV   66 (367)
T ss_pred             CeeEEEecC--CCC----cEEE--EeeCCCC-CC-CeEEEEEEEeeeCcchHHHhcCCCC--CCCCcccccc--cceEEE
Confidence            589999877  433    4554  4566655 77 9999999999999999987776442  3567899999  445999


Q ss_pred             EecCCCCC---CCCCCEEEe----------------------------------------------------ccCcceeE
Q 019042           89 VLDSTHPN---YKKDDLVWG----------------------------------------------------LTSWEEYS  113 (347)
Q Consensus        89 ~vG~~v~~---~~vGd~V~~----------------------------------------------------~g~~~~~~  113 (347)
                      .+|+++++   +++||+|++                                                    .|+|++|+
T Consensus        67 ~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  146 (367)
T cd08263          67 EVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYA  146 (367)
T ss_pred             EeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEE
Confidence            99999988   999999987                                                    26899999


Q ss_pred             eecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCH
Q 019042          114 LIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSK  192 (347)
Q Consensus       114 ~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~  192 (347)
                      .++.+. ++++ |++++.. ++++++..++|||+++.....+.++++|+|+| +|++|++++++|+..|++ |++++.++
T Consensus       147 ~~~~~~-~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~  222 (367)
T cd08263         147 VVPATA-LAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRD  222 (367)
T ss_pred             Eechhh-EEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCH
Confidence            999998 9999 9996554 68899999999999998878889999999996 699999999999999997 99998899


Q ss_pred             HHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccc
Q 019042          193 EKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGV  270 (347)
Q Consensus       193 ~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  270 (347)
                      ++.+.++ ++|++++++++.. ++.+++++.+++ ++|++||++++. .+..++++++++|+++.++.....    ....
T Consensus       223 ~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~  296 (367)
T cd08263         223 EKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAE  296 (367)
T ss_pred             HHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----Cccc
Confidence            9999998 8999999998776 788888887765 899999999986 889999999999999999864321    1122


Q ss_pred             cchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          271 HNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       271 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      .+...++.+++++.++....    ..+.+++++++++++.+++.  +++.++++++.++++.+.++...||+|+.
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         297 IPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             cCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            34445556788877743222    15678999999999999864  56788999999999999998888999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=6.6e-37  Score=276.26  Aligned_cols=312  Identities=19%  Similarity=0.239  Sum_probs=244.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +++  +.+++++  +|.|.+ ++ ++|+||+.++++|++|+....|.......+|.++|||++  |+|+
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~p~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~--G~v~   70 (325)
T cd05280           1 FKALVVEEQ--DGG--VSLFLRT--LPLDDL-PE-GDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAA--GTVV   70 (325)
T ss_pred             CceEEEccc--CCC--CcceEEe--CCCCCC-CC-CeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccE--EEEE
Confidence            689999988  664  2345544  666655 77 999999999999999998887754333445789999954  5998


Q ss_pred             EecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCC--C-
Q 019042           89 VLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSP--K-  156 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~--~-  156 (347)
                      ++  +++.+++||+|++.         |+|++|++++++. ++++ |++++.. +++.+++.+.+||.++......  . 
T Consensus        71 ~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~  145 (325)
T cd05280          71 SS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADW-VVPL-PEGLSLR-EAMILGTAGFTAALSVHRLEDNGQTP  145 (325)
T ss_pred             Ee--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhh-EEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHHhhccCCC
Confidence            88  56789999999984         7899999999998 9999 9995554 6889999999999998654433  5 


Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .+++|+|+|++|++|++++|+|+..|++|+++++++++++.++ ++|+++++++++. + ....+....+++|++|||.|
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d~vi~~~~  222 (325)
T cd05280         146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARWAGAIDTVG  222 (325)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCccEEEECCc
Confidence            3579999999999999999999999999999999999999998 8999888876542 1 12223333347999999999


Q ss_pred             chhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccc-cchHHHHHHHHHHHHcCCccccc
Q 019042          237 GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMPAIKEGKLVYVE  315 (347)
Q Consensus       237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~  315 (347)
                      +..+..++++++++|+++.+|.....    +. ..+...++.+++++.+....... ....+.++.+.+++..+ +.+.+
T Consensus       223 ~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  296 (325)
T cd05280         223 GDVLANLLKQTKYGGVVASCGNAAGP----EL-TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPD-LLEIV  296 (325)
T ss_pred             hHHHHHHHHhhcCCCEEEEEecCCCC----cc-ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcC-Cccce
Confidence            98999999999999999999875422    11 22333444688888887655432 23345667777777777 44457


Q ss_pred             ceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          316 DIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       316 ~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ..++++++++++++.+.+++..||+|+++
T Consensus       297 ~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         297 VREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             eeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            78899999999999999999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=7.1e-37  Score=276.23  Aligned_cols=313  Identities=20%  Similarity=0.234  Sum_probs=238.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +.+  .  .+...++|.|.+ ++ +||+||+.++++|++|.....+.......+|.++|||  ++|+|+
T Consensus         1 ~~a~~~~~~--~~~--~--~~~~~~~~~p~~-~~-~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e--~~G~V~   70 (326)
T cd08289           1 FQALVVEKD--EDD--V--SVSVKNLTLDDL-PE-GDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGID--LAGTVV   70 (326)
T ss_pred             CeeEEEecc--CCc--c--eeEEEEccCCCC-CC-CeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccc--eeEEEE
Confidence            689999887  655  2  344445777755 77 9999999999999999765432111123458899999  445888


Q ss_pred             EecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhc--C-CC
Q 019042           89 VLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELC--S-PK  156 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~--~-~~  156 (347)
                      +.  +++++++||+|++.         |+|++|++++++. ++++ |++++.. +++.+++.+.|||.++....  . ..
T Consensus        71 ~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~  145 (326)
T cd08289          71 ES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEW-VVPL-PKGLTLK-EAMILGTAGFTAALSIHRLEENGLTP  145 (326)
T ss_pred             Ec--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHH-eEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHHHhcCCCC
Confidence            85  45789999999975         7999999999998 9999 9995554 58889999999998885432  2 33


Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++++|+|+|++|++|++++|+|+++|++|+++++++++.+.++ ++|+++++++++.  ..+.+.+++++++|++|||+|
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d~vld~~g  222 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRWAGAVDPVG  222 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCcCEEEECCc
Confidence            4789999999999999999999999999999999999999998 8999888887652  345566665448999999999


Q ss_pred             chhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCccccc
Q 019042          237 GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVE  315 (347)
Q Consensus       237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~  315 (347)
                      +..+..++++++++|+++.+|.....+     .......++.+++++.+...... .....+.++.+...+..+.+...+
T Consensus       223 ~~~~~~~~~~l~~~G~~i~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (326)
T cd08289         223 GKTLAYLLSTLQYGGSVAVSGLTGGGE-----VETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEI  297 (326)
T ss_pred             HHHHHHHHHHhhcCCEEEEEeecCCCC-----CCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCcccccccc
Confidence            988999999999999999998753211     11224455578899988754321 112234444444444333333456


Q ss_pred             ceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          316 DIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       316 ~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ..+++++++.+|++.+.+++..||+++++
T Consensus       298 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         298 KQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             ceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            88899999999999999999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=1.1e-36  Score=274.60  Aligned_cols=310  Identities=21%  Similarity=0.252  Sum_probs=245.6

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      ||+++++.  ++|  .  .++.+++|.|.+ ++ +||+||+.++++|+.|+....+.......+|.++|||++  |+|+.
T Consensus         1 ~a~~~~~~--~~~--~--~~~~~~~~~p~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~--G~V~~   70 (323)
T TIGR02823         1 KALVVEKE--DGK--V--SAQVETLDLSDL-PE-GDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAA--GTVVS   70 (323)
T ss_pred             CeEEEccC--CCC--c--ceeEeecCCCCC-CC-CeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeE--EEEEe
Confidence            68889887  766  3  444555777766 77 999999999999999988777754333455889999955  58877


Q ss_pred             ecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhh--cCCCCC
Q 019042           90 LDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYEL--CSPKKG  158 (347)
Q Consensus        90 vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~~  158 (347)
                        +++..+++||+|+++         |++++|+.++.+. ++++ |++++.. +++.++..+.+||.++...  ..+.++
T Consensus        71 --~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~~~~  145 (323)
T TIGR02823        71 --SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADW-LVPL-PEGLSLR-EAMALGTAGFTAALSVMALERNGLTPE  145 (323)
T ss_pred             --cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhh-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhhhcCCCCC
Confidence              567789999999975         6899999999998 9999 9995554 5888899999999887543  347889


Q ss_pred             C-EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          159 E-YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       159 ~-~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      + +|+|+|++|++|++++|+|+++|+++++++.++++.+.++ ++|++++++.++. +.  .++.++++++|+++||+|+
T Consensus       146 ~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~vld~~g~  221 (323)
T TIGR02823       146 DGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERWAGAVDTVGG  221 (323)
T ss_pred             CceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCceEEEECccH
Confidence            8 9999999999999999999999999999998888889998 8999888887543 32  4555554469999999999


Q ss_pred             hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccccc
Q 019042          238 KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVED  316 (347)
Q Consensus       238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~  316 (347)
                      ..+..++++++++|+++.+|.....     ....+...++.+++++.+...... .....+.++.+.+++..+.+++. .
T Consensus       222 ~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  295 (323)
T TIGR02823       222 HTLANVLAQLKYGGAVAACGLAGGP-----DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-T  295 (323)
T ss_pred             HHHHHHHHHhCCCCEEEEEcccCCC-----CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-e
Confidence            8889999999999999999875321     111233445578888888765432 22334567778888888888764 4


Q ss_pred             eeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          317 IAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       317 ~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ..++++++++|++.+.+++..||+|+++
T Consensus       296 ~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       296 REITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             eeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            5889999999999999999999999863

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=9.4e-37  Score=278.15  Aligned_cols=307  Identities=18%  Similarity=0.168  Sum_probs=243.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +.     +.+++  +|.|.+ .+ +||+||+.++++|++|++...+.... ..+|.++|||  ++|+|+
T Consensus         1 mka~~~~~~--~~-----~~l~~--~~~p~~-~~-~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e--~~G~V~   66 (351)
T cd08285           1 MKAFAMLGI--GK-----VGWIE--KPIPVC-GP-NDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHE--AVGVVE   66 (351)
T ss_pred             CceEEEccC--Cc-----cEEEE--CCCCCC-CC-CeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcc--eEEEEE
Confidence            689999776  32     35544  566655 67 99999999999999999877665422 3558899999  556999


Q ss_pred             EecCCCCCCCCCCEEEe---------------------------------ccCcceeEeecCC--CcceeccCCCCCccc
Q 019042           89 VLDSTHPNYKKDDLVWG---------------------------------LTSWEEYSLIQSP--QHLIKILDTNVPLSY  133 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~---------------------------------~g~~~~~~~~~~~--~~~~~i~P~~~~~~~  133 (347)
                      ++|++++++++||+|++                                 .|+|++|++++.+  . ++++ |++++.. 
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~-~~~l-P~~~~~~-  143 (351)
T cd08285          67 EVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADAN-LAPL-PDGLTDE-  143 (351)
T ss_pred             EecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCc-eEEC-CCCCCHH-
Confidence            99999999999999986                                 2678999999974  6 9999 9995544 


Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      +++.++..+.|||+++ ....+++|++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.++ ++|+++++++++
T Consensus       144 ~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~  220 (351)
T cd08285         144 QAVMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVDYKN  220 (351)
T ss_pred             HhhhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEecCCC
Confidence            5788889999999997 567899999999997 59999999999999999 6889999999999998 899999999887


Q ss_pred             hhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccch--HHHHhccceeeeeEe
Q 019042          213 EPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL--MQVVGKRIRMEGFLA  288 (347)
Q Consensus       213 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~  288 (347)
                      . ++.+.+.+++.+ ++|++|||+|+ ..+..++++++++|+++.+|......    ....+.  .....+..++.+...
T Consensus       221 ~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~  295 (351)
T cd08285         221 G-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDD----YLPIPREEWGVGMGHKTINGGLC  295 (351)
T ss_pred             C-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCc----eeecChhhhhhhccccEEEEeec
Confidence            6 788888887765 89999999997 58899999999999999998754210    011111  111234445554332


Q ss_pred             cccccchHHHHHHHHHHHHcCCccc---ccceeeccccHHHHHHHhHcCC-CcceEEEEe
Q 019042          289 GDFYHQYPKFLELVMPAIKEGKLVY---VEDIAEGLEKAPSALVGIFTGQ-NVGKQLVVV  344 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~~~~~-~~gkivi~~  344 (347)
                      ..    .++.++++++++++|++++   .++..++++++++|++.+.+++ ...|++|++
T Consensus       296 ~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         296 PG----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             CC----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            11    1467889999999999987   3445689999999999999887 468999874

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.6e-36  Score=279.46  Aligned_cols=306  Identities=18%  Similarity=0.150  Sum_probs=248.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++       +++++++  +|.|.|.++ ++|+||+.++++|++|.....|.+.. .++|.++|||  +.|+|+
T Consensus         1 m~a~~~~~~-------~~~~~~~--~~~p~~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e--~~G~V~   67 (386)
T cd08283           1 MKALVWHGK-------GDVRVEE--VPDPKIEDP-TDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHE--FMGVVE   67 (386)
T ss_pred             CeeEEEecC-------CCceEEe--CCCCCCCCC-CeEEEEEEEEecchhhhhhhcCCCCC-CCCCcccccc--ceEEEE
Confidence            588998644       3455555  666666446 99999999999999999888875533 3468899999  556999


Q ss_pred             EecCCCCCCCCCCEEEec--------------------------------------------------cCcceeEeecCC
Q 019042           89 VLDSTHPNYKKDDLVWGL--------------------------------------------------TSWEEYSLIQSP  118 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~--------------------------------------------------g~~~~~~~~~~~  118 (347)
                      ++|++++++++||+|++.                                                  |+|++|++++++
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~  147 (386)
T cd08283          68 EVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFA  147 (386)
T ss_pred             EeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccc
Confidence            999999999999999762                                                  678999999987


Q ss_pred             --CcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH
Q 019042          119 --QHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKV  195 (347)
Q Consensus       119 --~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~  195 (347)
                        . ++++ |++++.. ++++++..+.+||+++ ....+.+|++|+|+| +|++|++++++|++.|+ +|+++++++++.
T Consensus       148 ~~~-~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~  222 (386)
T cd08283         148 DVG-PFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERL  222 (386)
T ss_pred             cCe-EEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence              6 9999 9995554 5888999999999999 778999999999997 59999999999999998 699999999999


Q ss_pred             HHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCch----------------------hHHHHHHhhccCCE
Q 019042          196 NLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGK----------------------MLDAVLLNMRIHGR  252 (347)
Q Consensus       196 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~----------------------~~~~~~~~l~~~G~  252 (347)
                      +.++ +++...++++...+++.+.+.+++++ ++|++|||+|++                      .++.++++++++|+
T Consensus       223 ~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~  301 (386)
T cd08283         223 EMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGT  301 (386)
T ss_pred             HHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCE
Confidence            9999 77444678776641378888888776 899999999752                      67889999999999


Q ss_pred             EEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccc--cceeeccccHHHHHHH
Q 019042          253 IAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVG  330 (347)
Q Consensus       253 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~  330 (347)
                      ++.+|.....     ....+....+.+++++.+....     ..+.++++++++.++++.+.  +...++++++.+|++.
T Consensus       302 iv~~g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~  371 (386)
T cd08283         302 VSIIGVYGGT-----VNKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKI  371 (386)
T ss_pred             EEEEcCCCCC-----cCccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHH
Confidence            9999875421     1123444567788888886432     25678999999999999863  5678899999999999


Q ss_pred             hHcCC-CcceEEEE
Q 019042          331 IFTGQ-NVGKQLVV  343 (347)
Q Consensus       331 ~~~~~-~~gkivi~  343 (347)
                      +.++. ..+|++|+
T Consensus       372 ~~~~~~~~~k~~~~  385 (386)
T cd08283         372 FDKKEDGCIKVVLK  385 (386)
T ss_pred             HHhCCCCeEEEEec
Confidence            98876 56899985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=2.5e-36  Score=276.81  Aligned_cols=312  Identities=18%  Similarity=0.185  Sum_probs=245.3

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      ..+|||.++.+.  +++    ++++  ++|.|.+ .+ +||+||+.++++|++|.+...+..  ...+|+++|||  ++|
T Consensus         5 ~~~~~a~~~~~~--~~~----~~l~--~~p~p~~-~~-~~vlvkv~~~gi~~~D~~~~~g~~--~~~~p~v~G~e--~~G   70 (373)
T cd08299           5 VIKCKAAVLWEP--KKP----FSIE--EIEVAPP-KA-HEVRIKIVATGICRSDDHVVSGKL--VTPFPVILGHE--AAG   70 (373)
T ss_pred             cceeEEEEEecC--CCC----cEEE--EeecCCC-CC-CEEEEEEEEEEcCcccHHHhcCCC--CCCCCcccccc--ceE
Confidence            346899988776  443    4555  4677765 77 999999999999999998887754  23468899999  556


Q ss_pred             EEEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeEe
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYSL  114 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~  114 (347)
                      +|+++|++++.+++||+|+++                                                   |+|++|++
T Consensus        71 ~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~  150 (373)
T cd08299          71 IVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTV  150 (373)
T ss_pred             EEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEE
Confidence            999999999999999999863                                                   67999999


Q ss_pred             ecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Q 019042          115 IQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKE  193 (347)
Q Consensus       115 ~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~  193 (347)
                      ++++. ++++ |++++.. +++.+++++.+||+++....++++|++|+|+| .|++|++++++|++.|+ +|++++++++
T Consensus       151 v~~~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~  226 (373)
T cd08299         151 VDEIA-VAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKD  226 (373)
T ss_pred             ecccc-eeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence            99999 9999 9995554 68888889999999987778999999999997 59999999999999999 8999999999


Q ss_pred             HHHHHHHHhCCCeeEecCCh-hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhh-ccCCEEEEEcccccccCCCCccc
Q 019042          194 KVNLLKNKFGFDDAFNYKKE-PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNM-RIHGRIAVCGMISQYNLEKPEGV  270 (347)
Q Consensus       194 ~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~  270 (347)
                      +++.++ ++|+++++++.+. .++.+.+.+++++++|+++||+|+ ..+..++..+ +++|+++.+|.....    ....
T Consensus       227 ~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~  301 (373)
T cd08299         227 KFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLS  301 (373)
T ss_pred             HHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceee
Confidence            999998 8999998987643 136677777766689999999996 5677766655 579999999875321    0111


Q ss_pred             cchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          271 HNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       271 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .... .+.++.++.++....+..  .+.+.++++.+.++.++  +.++++|+++++.+|++.+.+++. .|+++++
T Consensus       302 ~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         302 INPM-LLLTGRTWKGAVFGGWKS--KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             cCHH-HHhcCCeEEEEEecCCcc--HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            2222 234678888887665421  35566677777766543  457788999999999999887664 4888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.3e-36  Score=270.33  Aligned_cols=300  Identities=21%  Similarity=0.230  Sum_probs=243.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||++++++.  + |.    .++..++|.|.+ ++ +||+||+.++++|+.|......     ..+|.++|||  ++|+|+
T Consensus         1 ~~~~~~~~~--~-~~----~~~~~~~~~p~~-~~-~ev~v~v~~~~i~~~d~~~~~~-----~~~~~~~g~e--~~G~v~   64 (305)
T cd08270           1 MRALVVDPD--A-PL----RLRLGEVPDPQP-AP-HEALVRVAAISLNRGELKFAAE-----RPDGAVPGWD--AAGVVE   64 (305)
T ss_pred             CeEEEEccC--C-Cc----eeEEEecCCCCC-CC-CEEEEEEEEEecCHHHHHhhcc-----CCCCCcccce--eEEEEE
Confidence            489999776  4 63    444444666755 77 9999999999999999876542     2346789999  556999


Q ss_pred             EecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           89 VLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      ++|++++.+++||+|+++   |+|++|+.++.+. ++++ |++++.. +++++++.+.+||+++...... +|++|+|+|
T Consensus        65 ~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g  140 (305)
T cd08270          65 RAAADGSGPAVGARVVGLGAMGAWAELVAVPTGW-LAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LGRRVLVTG  140 (305)
T ss_pred             EeCCCCCCCCCCCEEEEecCCcceeeEEEEchHH-eEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEEC
Confidence            999999999999999986   7999999999998 9999 9996554 6889999999999999776554 599999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL  245 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~  245 (347)
                      +.|++|++++++|++.|++|+++++++++.+.++ ++|++.+++...  +       +.++++|+++|++|+..+..+++
T Consensus       141 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~~~~~~~~  210 (305)
T cd08270         141 ASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGPQLARALE  210 (305)
T ss_pred             CCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCcHHHHHHHH
Confidence            9999999999999999999999999999999999 799876554321  1       22246999999999988899999


Q ss_pred             hhccCCEEEEEcccccccCCCCccccchHHHHh--ccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeecccc
Q 019042          246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVG--KRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEK  323 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  323 (347)
                      +++++|+++.+|.....     ....+...+..  ++.++.++.... +....+.++.+.+++.++++++.+..++++++
T Consensus       211 ~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  284 (305)
T cd08270         211 LLAPGGTVVSVGSSSGE-----PAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGWRGSWTE  284 (305)
T ss_pred             HhcCCCEEEEEeccCCC-----cccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceeccEEcHHH
Confidence            99999999999875311     11223333333  588888877654 33446788999999999999987778889999


Q ss_pred             HHHHHHHhHcCCCcceEEEEe
Q 019042          324 APSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       324 ~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +++|++.+.++...||+++++
T Consensus       285 ~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         285 IDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999998889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=1.6e-36  Score=275.13  Aligned_cols=305  Identities=20%  Similarity=0.211  Sum_probs=245.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++..+  | |  ..+++  .++|.|.+ ++ +||+||+.++++|++|+....+..  ....|.++|||++  |+|+
T Consensus         1 m~a~~~~~~--~-~--~~~~~--~~~~~p~~-~~-~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~--G~v~   67 (339)
T cd08249           1 QKAAVLTGP--G-G--GLLVV--VDVPVPKP-GP-DEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFA--GTVV   67 (339)
T ss_pred             CceEEeccC--C-C--Ccccc--cCCCCCCC-CC-CEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeee--EEEE
Confidence            589999877  5 4  34445  44677766 77 999999999999999987765432  1234778999955  5999


Q ss_pred             EecCCCCCCCCCCEEEec-----------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCC--
Q 019042           89 VLDSTHPNYKKDDLVWGL-----------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSP--  155 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~-----------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~--  155 (347)
                      .+|++++.+++||+|+++           |+|++|++++.+. ++++ |++++.. +++.++..+.+||+++.+..++  
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~  144 (339)
T cd08249          68 EVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADL-TAKI-PDNISFE-EAATLPVGLVTAALALFQKLGLPL  144 (339)
T ss_pred             EeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhh-eEEC-CCCCCHH-HceecchHHHHHHHHHhccccCCC
Confidence            999999999999999986           7899999999988 9999 9995554 5888899999999998766544  


Q ss_pred             --------CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCC
Q 019042          156 --------KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       156 --------~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                              .++++++|+|++|++|++++++|++.|++|++++ ++++.+.++ ++|+++++++.+. ++.+.+++.++++
T Consensus       145 ~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~  221 (339)
T cd08249         145 PPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDIRAATGGK  221 (339)
T ss_pred             CCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHHHHhcCCC
Confidence                    7899999999999999999999999999999988 558888897 8999999998776 7888888877678


Q ss_pred             ccEEEECCCc-hhHHHHHHhhcc--CCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc-------cccchHH
Q 019042          228 IDIYFENVGG-KMLDAVLLNMRI--HGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD-------FYHQYPK  297 (347)
Q Consensus       228 ~d~vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~  297 (347)
                      +|++||++|+ ..+..+++++++  +|+++.++......            .+..+.+........       .+.....
T Consensus       222 ~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (339)
T cd08249         222 LRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIPEDREFGEV  289 (339)
T ss_pred             eeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeecccccccccchHH
Confidence            9999999998 789999999999  99999998753211            111222222222111       1333456


Q ss_pred             HHHHHHHHHHcCCcccccceeec--cccHHHHHHHhHcCC-CcceEEEEe
Q 019042          298 FLELVMPAIKEGKLVYVEDIAEG--LEKAPSALVGIFTGQ-NVGKQLVVV  344 (347)
Q Consensus       298 ~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~gkivi~~  344 (347)
                      .++++.+++.++.+.+.....++  ++++++|++.+.+++ ..+|+|+++
T Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         290 FWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            78889999999999887666777  999999999999988 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=5.5e-36  Score=272.55  Aligned_cols=305  Identities=18%  Similarity=0.111  Sum_probs=247.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +     .++++  ++|.|.|.++ +||+||+.++++|+.|+..+.|.+.. ..+|.++|||  ++|+|+
T Consensus         1 m~a~~~~~~--~-----~~~~~--~~~~p~~~~~-~ev~v~v~a~~i~~~d~~~~~g~~~~-~~~~~~~g~e--~~G~V~   67 (345)
T cd08286           1 MKALVYHGP--G-----KISWE--DRPKPTIQEP-TDAIVKMLKTTICGTDLHILKGDVPT-VTPGRILGHE--GVGVVE   67 (345)
T ss_pred             CceEEEecC--C-----ceeEE--ecCCCCCCCC-CeEEEEEEEeeecchhhHHHcCCCCC-CCCCceeccc--ceEEEE
Confidence            589999766  3     24554  4666665567 99999999999999999888775432 3447899999  556999


Q ss_pred             EecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCC--CcceeccCCCCCccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSP--QHLIKILDTNVPLSYYT  135 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~--~~~~~i~P~~~~~~~~a  135 (347)
                      .+|++++.+++||+|+++                               |+|++|+.++.+  . ++++ |++++.. ++
T Consensus        68 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-p~~~~~~-~a  144 (345)
T cd08286          68 EVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNS-LYKL-PEGVDEE-AA  144 (345)
T ss_pred             EeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCc-eEEC-CCCCCHH-Hh
Confidence            999999999999999873                               678999999987  6 9999 9995544 58


Q ss_pred             cccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCeeEecCChh
Q 019042          136 GILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEP  214 (347)
Q Consensus       136 a~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~  214 (347)
                      +.++..+++||.++....++.++++|+|+|+ |++|++++|+|+..| .+|+++++++++.+.++ ++|+++++++.+. 
T Consensus       145 a~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-  221 (345)
T cd08286         145 VMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSAKG-  221 (345)
T ss_pred             hhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccccc-
Confidence            8899999999998767788999999999875 999999999999999 69999888888988888 8999999998775 


Q ss_pred             hHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccc
Q 019042          215 DLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY  292 (347)
Q Consensus       215 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  292 (347)
                      ++.+.+.+++++ ++|++|||+|. ..+..++++++++|+++.+|....      ....+....+.+++++.+....   
T Consensus       222 ~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~---  292 (345)
T cd08286         222 DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITTGLVD---  292 (345)
T ss_pred             cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEeecCc---
Confidence            777888877766 89999999986 578888999999999999986421      1223455557788888765322   


Q ss_pred             cchHHHHHHHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCC--CcceEEEEe
Q 019042          293 HQYPKFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQ--NVGKQLVVV  344 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~--~~gkivi~~  344 (347)
                         .+.++++.++++++.+++.  +.+++++++++++++.+.+..  ...|++|++
T Consensus       293 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         293 ---TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             ---hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence               2468888899999998753  568889999999999998764  345999864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=4.2e-36  Score=272.68  Aligned_cols=303  Identities=15%  Similarity=0.121  Sum_probs=239.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++       +.+++++  +|.|.| ++ +||+||+.++++|++|.+...+.... ...|.++|||  ++|+|+
T Consensus         1 m~a~~~~~~-------~~~~~~~--~~~p~~-~~-~~vlV~v~~~gi~~~d~~~~~g~~~~-~~~p~i~G~e--~~G~V~   66 (339)
T PRK10083          1 MKSIVIEKP-------NSLAIEE--RPIPQP-AA-GEVRVKVKLAGICGSDSHIYRGHNPF-AKYPRVIGHE--FFGVID   66 (339)
T ss_pred             CeEEEEecC-------CeeEEEe--ccCCCC-CC-CeEEEEEEEEEEcccchHHHcCCCCc-CCCCcccccc--eEEEEE
Confidence            589998765       2345554  666665 77 99999999999999998877664322 2458999999  556999


Q ss_pred             EecCCCCCCCCCCEEE---------------------------ec---cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVW---------------------------GL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~---------------------------~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++.+++||+|+                           ++   |+|++|+.++... ++++ |++++.  +.+++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~--~~a~~  142 (339)
T PRK10083         67 AVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKN-AHRI-PDAIAD--QYAVM  142 (339)
T ss_pred             EECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHH-eEEC-cCCCCH--HHHhh
Confidence            9999999999999998                           33   7899999999998 9999 999544  33456


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHH-CCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKL-VGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~-~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      ...+.++|.++ ...++++|++|+|+| +|++|++++|+|++ +|++ ++++++++++.+.++ ++|+++++++++. ++
T Consensus       143 ~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~  218 (339)
T PRK10083        143 VEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQE-PL  218 (339)
T ss_pred             hchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cH
Confidence            77788888654 667999999999999 69999999999997 5995 777888899999998 9999999988765 66


Q ss_pred             HHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccch
Q 019042          217 DAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY  295 (347)
Q Consensus       217 ~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  295 (347)
                      .+.+... +.++|++||++|+ ..+..++++++++|+++.+|.....      ...+......+++++.+....      
T Consensus       219 ~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------  285 (339)
T PRK10083        219 GEALEEK-GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEP------SEIVQQGITGKELSIFSSRLN------  285 (339)
T ss_pred             HHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------ceecHHHHhhcceEEEEEecC------
Confidence            6666431 1157899999996 5889999999999999999875321      112333344567776665431      


Q ss_pred             HHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCC-CcceEEEEeCC
Q 019042          296 PKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQ-NVGKQLVVVAP  346 (347)
Q Consensus       296 ~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkivi~~~~  346 (347)
                      .+.+++++++++++.+++  .+.++|+++++++|++.+.++. ..+|+++.|.+
T Consensus       286 ~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        286 ANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            467899999999999987  3678899999999999998654 56899998864

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=4.9e-36  Score=272.09  Aligned_cols=306  Identities=22%  Similarity=0.258  Sum_probs=254.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||++++..+  +.|    . +...+.|.|.+ ++ ++|+|++.++++|+.|.....+.......+|.++|+|  ++|+|+
T Consensus         1 ~~~~~~~~~--~~~----~-~~~~~~~~~~~-~~-~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~--~~G~v~   69 (338)
T cd08254           1 MKAWRFHKG--SKG----L-LVLEEVPVPEP-GP-GEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHE--IAGTVV   69 (338)
T ss_pred             CeeEEEecC--CCC----c-eEEeccCCCCC-CC-CeEEEEEEEEeeccHhHHHHcCCCcccCCCCEecccc--ccEEEE
Confidence            589999888  666    2 44445677755 77 9999999999999999988877654445567899999  556999


Q ss_pred             EecCCCCCCCCCCEEEe------------------------------ccCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++.+++||+|++                              .|+|++|+.++.+. ++++ |++++.. +++++
T Consensus        70 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~a~~~  146 (338)
T cd08254          70 EVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARA-LVPV-PDGVPFA-QAAVA  146 (338)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHH-eEEC-CCCCCHH-Hhhhh
Confidence            99999999999999986                              27899999999988 9999 9995554 68889


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                      +..+.+||+++.....+.++++|+|.| +|++|++++++|+..|++|+++++++++.+.++ ++|++++++..+. ++..
T Consensus       147 ~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~  223 (338)
T cd08254         147 TDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLDD-SPKD  223 (338)
T ss_pred             cchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCCc-CHHH
Confidence            999999999998888899999999976 599999999999999999999999999999998 8999888887764 5656


Q ss_pred             HHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchH
Q 019042          219 ALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP  296 (347)
Q Consensus       219 ~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  296 (347)
                      .+ ..+.+ ++|+++||+|. ..+..++++++++|+++.++.....      ...+...++.++.++.++....     .
T Consensus       224 ~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~  291 (338)
T cd08254         224 KK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK------LTVDLSDLIARELRIIGSFGGT-----P  291 (338)
T ss_pred             HH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC------CccCHHHHhhCccEEEEeccCC-----H
Confidence            66 44444 89999999986 5889999999999999999864321      1234455667778777765443     5


Q ss_pred             HHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          297 KFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       297 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +.+..+.++++++.+.+. ...++++++.++++.+.+++..||+|+++
T Consensus       292 ~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         292 EDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            778899999999999876 66889999999999999999999999864

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=4.8e-36  Score=272.20  Aligned_cols=304  Identities=18%  Similarity=0.184  Sum_probs=246.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +.+.    .+++  +|.|.+ ++ +||+||+.++++|+.|+....+...  ...|.++|||+  +|+|+
T Consensus         1 mka~~~~~~--~~~~----~~~~--~~~p~~-~~-~evlv~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~--~G~V~   66 (338)
T PRK09422          1 MKAAVVNKD--HTGD----VVVE--KTLRPL-KH-GEALVKMEYCGVCHTDLHVANGDFG--DKTGRILGHEG--IGIVK   66 (338)
T ss_pred             CeEEEecCC--CCCc----eEEE--ecCCCC-CC-CeEEEEEEEEeechhHHHHHcCCCC--CCCCccCCccc--ceEEE
Confidence            689999887  5542    2554  566655 77 9999999999999999887766432  23468899995  45999


Q ss_pred             EecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      .+|++++.+++||+|++                               .|++++|+.++.+. ++++ |++++.. ++++
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~aa~  143 (338)
T PRK09422         67 EVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADY-AVKV-PEGLDPA-QASS  143 (338)
T ss_pred             EECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHH-eEeC-CCCCCHH-Heeh
Confidence            99999999999999986                               37899999999988 9999 9995554 6889


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      ++..+.|||+++ ..+++++|++|+|+| +|++|++++|+|++. |++|+++++++++.+.++ ++|++.+++++...++
T Consensus       144 l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~  220 (338)
T PRK09422        144 ITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKRVEDV  220 (338)
T ss_pred             hhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEecccccccH
Confidence            999999999998 668999999999999 599999999999984 999999999999999998 9999888887642266


Q ss_pred             HHHHHHHCCCCcc-EEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccch
Q 019042          217 DAALKRCFPEGID-IYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY  295 (347)
Q Consensus       217 ~~~i~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  295 (347)
                      .+.+++.++ ++| +++++.++..+..++++++++|+++.+|.....      ...+......++.++.++....     
T Consensus       221 ~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----  288 (338)
T PRK09422        221 AKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES------MDLSIPRLVLDGIEVVGSLVGT-----  288 (338)
T ss_pred             HHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC------ceecHHHHhhcCcEEEEecCCC-----
Confidence            777877766 588 555555567899999999999999999864211      1223444555677776654333     


Q ss_pred             HHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          296 PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       296 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      .+.++++++++++|.+.+.++ .++++++++|++.+.++...||+++.+.
T Consensus       289 ~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        289 RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            567889999999999877654 5799999999999999999999999764

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=6.6e-36  Score=274.60  Aligned_cols=309  Identities=18%  Similarity=0.121  Sum_probs=244.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||+|++..+       +.+++  .++|.|.++++ +||+||++++++|++|++...+...  ..+|.++|||  ++|+|+
T Consensus         1 m~~~~~~~~-------~~~~~--~~~~~p~~~~~-~evlv~v~a~~i~~~D~~~~~g~~~--~~~p~~~g~e--~~G~V~   66 (375)
T cd08282           1 MKAVVYGGP-------GNVAV--EDVPDPKIEHP-TDAIVRITTTAICGSDLHMYRGRTG--AEPGLVLGHE--AMGEVE   66 (375)
T ss_pred             CceEEEecC-------CceeE--EeCCCCCCCCC-CeEEEEEEEEeeCHHHHHHHcCCCC--CCCCceeccc--cEEEEE
Confidence            478888544       22444  44666664356 9999999999999999988877543  3458899999  556999


Q ss_pred             EecCCCCCCCCCCEEEe----------------------------------------ccCcceeEeecCC--CcceeccC
Q 019042           89 VLDSTHPNYKKDDLVWG----------------------------------------LTSWEEYSLIQSP--QHLIKILD  126 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~----------------------------------------~g~~~~~~~~~~~--~~~~~i~P  126 (347)
                      ++|++++.+++||+|++                                        .|+|++|++++..  . ++++ |
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~-~~~l-P  144 (375)
T cd08282          67 EVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFN-LLKL-P  144 (375)
T ss_pred             EeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCc-EEEC-C
Confidence            99999999999999986                                        1679999999975  6 9999 9


Q ss_pred             CCCCccc--cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC
Q 019042          127 TNVPLSY--YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFG  203 (347)
Q Consensus       127 ~~~~~~~--~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g  203 (347)
                      ++++...  .+++++..+++||+++ ..+++.+|++|+|.| .|++|++++|+|++.|+ +|+++++++++.+.++ ++|
T Consensus       145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~-~~g  221 (375)
T cd08282         145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAE-SIG  221 (375)
T ss_pred             CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcC
Confidence            9955542  3677888999999998 678999999999977 59999999999999998 8999989999999998 899


Q ss_pred             CCeeEecCChhhHHHHHHHHCCCCccEEEECCCch------------hHHHHHHhhccCCEEEEEcccccccCCC-----
Q 019042          204 FDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK------------MLDAVLLNMRIHGRIAVCGMISQYNLEK-----  266 (347)
Q Consensus       204 ~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----  266 (347)
                      + ..+++++. ++.+.+.+++++++|+++||+|+.            .+..++++++++|+++.+|.........     
T Consensus       222 ~-~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~  299 (375)
T cd08282         222 A-IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAA  299 (375)
T ss_pred             C-eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccc
Confidence            8 45777765 777788877766799999999875            4889999999999998887643211100     


Q ss_pred             --CccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          267 --PEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       267 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                        ....++...++.++..+.+....     .++.++.+++++.++.+++.  +.+.++++++++|++.+.++. .+|+|+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv  373 (375)
T cd08282         300 KQGELSFDFGLLWAKGLSFGTGQAP-----VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVI  373 (375)
T ss_pred             cCccccccHHHHHhcCcEEEEecCC-----chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEe
Confidence              01123445556666666554322     25678889999999999863  788999999999999999888 889998


Q ss_pred             Ee
Q 019042          343 VV  344 (347)
Q Consensus       343 ~~  344 (347)
                      ++
T Consensus       374 ~~  375 (375)
T cd08282         374 KP  375 (375)
T ss_pred             CC
Confidence            53

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=5.5e-36  Score=272.77  Aligned_cols=305  Identities=20%  Similarity=0.137  Sum_probs=246.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +     .+.+.+  +|.|.|.++ ++|+||+.++++|+.|+....+.+.. .++|.++|+|  ++|+|+
T Consensus         1 ~ka~~~~~~--~-----~~~~~~--~~~p~~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e--~~G~V~   67 (347)
T cd05278           1 MKALVYLGP--G-----KIGLEE--VPDPKIQGP-HDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHE--FVGEVV   67 (347)
T ss_pred             CceEEEecC--C-----ceEEEE--cCCCCCCCC-CeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccc--eEEEEE
Confidence            478999765  2     235554  666655356 99999999999999999887775532 4557899999  556999


Q ss_pred             EecCCCCCCCCCCEEEe---------------------------------ccCcceeEeecCC--CcceeccCCCCCccc
Q 019042           89 VLDSTHPNYKKDDLVWG---------------------------------LTSWEEYSLIQSP--QHLIKILDTNVPLSY  133 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~---------------------------------~g~~~~~~~~~~~--~~~~~i~P~~~~~~~  133 (347)
                      ++|++++++++||+|++                                 .|+|++|++++++  . ++++ |++++.. 
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~~~~~-  144 (347)
T cd05278          68 EVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMN-LAKI-PDGLPDE-  144 (347)
T ss_pred             EECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCe-EEEC-CCCCCHH-
Confidence            99999999999999987                                 2689999999987  6 9999 9995544 


Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      ++++++..+.|||+++ ...++.++++|+|.| .|++|++++|+|+.+|+ +|+++.+++++.+.++ ++|+++++++++
T Consensus       145 ~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~  221 (347)
T cd05278         145 DALMLSDILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIINPKN  221 (347)
T ss_pred             HHhhhcchhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEcCCc
Confidence            5888999999999998 668899999999976 59999999999999997 8999988888888888 899999999887


Q ss_pred             hhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          213 EPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       213 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      . ++.+.+++.+++ ++|++||+.++ ..+..++++++++|+++.+|......     ........+.+++++.+.....
T Consensus       222 ~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  295 (347)
T cd05278         222 G-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPD-----PLPLLGEWFGKNLTFKTGLVPV  295 (347)
T ss_pred             c-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCc-----ccCccchhhhceeEEEeeccCc
Confidence            6 788888887775 89999999987 68899999999999999998643211     0011122345677777654322


Q ss_pred             cccchHHHHHHHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCCC-cceEEEE
Q 019042          291 FYHQYPKFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQN-VGKQLVV  343 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkivi~  343 (347)
                           .+.++++.+++.++.+++.  +...++++++++|++.+..++. .+|++++
T Consensus       296 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         296 -----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             -----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence                 5678999999999999864  5677899999999999887776 6899876

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-36  Score=271.66  Aligned_cols=303  Identities=25%  Similarity=0.290  Sum_probs=247.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +.+    +++++  +|.|.+ ++ +||+||+.++++|+.|+....+... ..++|.++|||  ++|+|+
T Consensus         1 m~a~~~~~~--~~~----~~~~~--~~~~~~-~~-~~v~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e--~~G~v~   67 (334)
T PRK13771          1 MKAVILPGF--KQG----YRIEE--VPDPKP-GK-DEVVIKVNYAGLCYRDLLQLQGFYP-RMKYPVILGHE--VVGTVE   67 (334)
T ss_pred             CeeEEEcCC--CCC----cEEEe--CCCCCC-CC-CeEEEEEEEEeechhhHHHhcCCCC-CCCCCeecccc--ceEEEE
Confidence            589999877  543    34544  677766 77 9999999999999999887766432 23457889999  556999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++.+++||+|+++                              |+|++|+.++.+. ++++ |++++.. +++.+
T Consensus        68 ~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~a~l  144 (334)
T PRK13771         68 EVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTS-LVKV-PPNVSDE-GAVIV  144 (334)
T ss_pred             EeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhc-eEEC-CCCCCHH-Hhhcc
Confidence            999999999999999974                              6799999999998 9999 9996554 58888


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                      ++.+.+||+++... .+.++++|+|+|++|++|++++|+|++.|++|+++++++++.+.++ ++ ++++++++   ++.+
T Consensus       145 ~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~  218 (334)
T PRK13771        145 PCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS---KFSE  218 (334)
T ss_pred             cchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch---hHHH
Confidence            99999999999765 8999999999999999999999999999999999999999999997 78 76666654   3455


Q ss_pred             HHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHH
Q 019042          219 ALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF  298 (347)
Q Consensus       219 ~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  298 (347)
                      .++++  +++|+++||+|+.....++++++++|+++.+|.....    ..........+.+++++.+....     .++.
T Consensus       219 ~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  287 (334)
T PRK13771        219 EVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHISA-----TKRD  287 (334)
T ss_pred             HHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecCC-----CHHH
Confidence            56654  2699999999998889999999999999999875321    10012233345678888776322     2677


Q ss_pred             HHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          299 LELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       299 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++.++++++++.+++.+...++++++++|++.+.++...||+++..
T Consensus       288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        288 VEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            9999999999999877788899999999999999888889999864

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=8.2e-36  Score=273.00  Aligned_cols=307  Identities=22%  Similarity=0.290  Sum_probs=250.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +.+    +++++  +|.|.+ ++ ++|+||+.++++|+.|+....+...  ..+|.++|+|  ++|+|+
T Consensus         1 m~a~~~~~~--~~~----~~~~~--~~~p~~-~~-~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e--~~G~V~   66 (363)
T cd08279           1 MRAAVLHEV--GKP----LEIEE--VELDDP-GP-GEVLVRIAAAGLCHSDLHVVTGDLP--APLPAVLGHE--GAGVVE   66 (363)
T ss_pred             CeEEEEecC--CCC----ceEEE--eeCCCC-CC-CeEEEEEEEeecCcHHHHHhcCCCC--CCCCcccccc--ceEEEE
Confidence            589999987  654    35544  566655 67 9999999999999999887776442  3457889999  556999


Q ss_pred             EecCCCCCCCCCCEEEe--------------------------------------------------ccCcceeEeecCC
Q 019042           89 VLDSTHPNYKKDDLVWG--------------------------------------------------LTSWEEYSLIQSP  118 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~--------------------------------------------------~g~~~~~~~~~~~  118 (347)
                      .+|++++.+++||+|++                                                  .|+|++|+.++++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  146 (363)
T cd08279          67 EVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEA  146 (363)
T ss_pred             EeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccc
Confidence            99999999999999987                                                  2689999999999


Q ss_pred             CcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHH
Q 019042          119 QHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNL  197 (347)
Q Consensus       119 ~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~  197 (347)
                      . ++++ |++++.. +++.+++.+.+||.++....++.++++|+|+| .|++|++++++|++.|++ |+++++++++.+.
T Consensus       147 ~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~  222 (363)
T cd08279         147 S-VVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLEL  222 (363)
T ss_pred             c-EEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHH
Confidence            9 9999 9995554 68888999999999988888999999999996 599999999999999995 9999999999998


Q ss_pred             HHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHH
Q 019042          198 LKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQ  275 (347)
Q Consensus       198 ~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  275 (347)
                      ++ ++|++++++++.. ++...+.+++++ ++|++||++++ ..+..++++++++|+++.++.....    .....+...
T Consensus       223 ~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~  296 (363)
T cd08279         223 AR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG----ETVSLPALE  296 (363)
T ss_pred             HH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCC----cccccCHHH
Confidence            88 8999999988775 788888887755 89999999995 6889999999999999999764320    112234455


Q ss_pred             HHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEE
Q 019042          276 VVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQL  341 (347)
Q Consensus       276 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkiv  341 (347)
                      +..++..+.++....  ....+.+++++++++++.+++  .+..+++++++++|++.+.+++..+.++
T Consensus       297 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         297 LFLSEKRLQGSLYGS--ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HhhcCcEEEEEEecC--cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            555677777765432  223678999999999999976  3677889999999999998887664444

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-35  Score=268.71  Aligned_cols=310  Identities=24%  Similarity=0.300  Sum_probs=259.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++..  +.+  +.+.++  +.+.|.+ ++ +|++||+.++++|++|+....+........|.++|||  +.|+|+
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~--~~~~~~~-~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e--~~G~v~   70 (336)
T cd08276           1 MKAWRLSGG--GGL--DNLKLV--EEPVPEP-GP-GEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSD--GAGEVV   70 (336)
T ss_pred             CeEEEEecc--CCC--cceEEE--eccCCCC-CC-CeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccc--eeEEEE
Confidence            689999877  555  345554  4565655 77 9999999999999999988776543334467899999  456999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------cCcceeEeecCCCcceeccCCCCCccccccccCCchhh
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLT  144 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~t  144 (347)
                      .+|++++++++||+|++.                        |+|++|+.++.+. ++++ |++++.. +++.++..+.+
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~a~~~~~~~~~  147 (336)
T cd08276          71 AVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEG-LVRA-PDHLSFE-EAATLPCAGLT  147 (336)
T ss_pred             EeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHH-eEEC-CCCCCHH-HhhhhhHHHHH
Confidence            999999999999999874                        5799999999988 9999 9995444 57888999999


Q ss_pred             HHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCC-hhhHHHHHHHH
Q 019042          145 AYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKK-EPDLDAALKRC  223 (347)
Q Consensus       145 A~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~  223 (347)
                      ||+++.....+++|++|+|+| +|++|+++++++++.|++|+++++++++.+.++ ++|.+++++... . ++.+.+.+.
T Consensus       148 a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~  224 (336)
T cd08276         148 AWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DWGEEVLKL  224 (336)
T ss_pred             HHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CHHHHHHHH
Confidence            999998878999999999996 699999999999999999999999999999998 789988888766 4 788888888


Q ss_pred             CCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHH
Q 019042          224 FPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV  302 (347)
Q Consensus       224 ~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  302 (347)
                      +++ ++|+++|+.+...+..++++++++|+++.+|.....     ....+....+.+++++.+.....     .+.++++
T Consensus       225 ~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  294 (336)
T cd08276         225 TGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS-----RAQFEAM  294 (336)
T ss_pred             cCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc-----HHHHHHH
Confidence            876 899999999988889999999999999999875432     11234566678899999887654     5678889


Q ss_pred             HHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          303 MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       303 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++++.++.+.+.....+++++++++++.+.++...+|+++++
T Consensus       295 ~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         295 NRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999988877778889999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.2e-35  Score=270.29  Aligned_cols=302  Identities=18%  Similarity=0.166  Sum_probs=245.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++       +.+++++  +|.|.|.++ +||+||+.++++|+.|+....+.+.  ..+|.++|+|  +.|+|+
T Consensus         1 ~~a~~~~~~-------~~~~~~~--~~~p~~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e--~~G~V~   66 (344)
T cd08284           1 MKAVVFKGP-------GDVRVEE--VPIPQIQDP-TDAIVKVTAAAICGSDLHIYRGHIP--STPGFVLGHE--FVGEVV   66 (344)
T ss_pred             CeeEEEecC-------CCceEEe--ccCCCCCCC-CeEEEEEEEeeccccchhhhcCCCC--CCCCcccccc--eEEEEE
Confidence            578998654       2345544  666766346 9999999999999999887776442  3457889999  556999


Q ss_pred             EecCCCCCCCCCCEEEec----------------------------------cCcceeEeecCC--CcceeccCCCCCcc
Q 019042           89 VLDSTHPNYKKDDLVWGL----------------------------------TSWEEYSLIQSP--QHLIKILDTNVPLS  132 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~----------------------------------g~~~~~~~~~~~--~~~~~i~P~~~~~~  132 (347)
                      .+|++++++++||+|+++                                  |+|++|++++++  . ++++ |++++..
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~~-p~~l~~~  144 (344)
T cd08284          67 EVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGT-LLKL-PDGLSDE  144 (344)
T ss_pred             eeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCc-eEEC-CCCCCHH
Confidence            999999999999999972                                  789999999975  6 9999 9995554


Q ss_pred             ccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          133 YYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       133 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                       ++++++..+.|||+++.. ..+.++++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|+. .++.+
T Consensus       145 -~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~~~~  219 (344)
T cd08284         145 -AALLLGDILPTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PINFE  219 (344)
T ss_pred             -HhhhhcCchHHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EEecC
Confidence             688899999999999965 7889999999997 69999999999999997 8999988888888888 89975 46766


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEec
Q 019042          212 KEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG  289 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  289 (347)
                      .. ++.+.+.+++++ ++|++|||+++ ..+..++++++++|+++.+|.....     .........+.+++++.+... 
T Consensus       220 ~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~-  292 (344)
T cd08284         220 DA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLTLRFGRC-  292 (344)
T ss_pred             Cc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcEEEEecC-
Confidence            65 788888888775 89999999996 6889999999999999999875422     112334556678888765421 


Q ss_pred             ccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          290 DFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                          ...+.++++++++.++.+++  .+...+++++++++++.+.+++. +|+|++
T Consensus       293 ----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         293 ----PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             ----CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence                23677899999999999875  36678899999999999988777 999985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-35  Score=271.19  Aligned_cols=302  Identities=18%  Similarity=0.162  Sum_probs=241.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--------CcccCCCCCCc
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--------SFVASFNPGEP   80 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--------~~~~p~v~G~e   80 (347)
                      |||++++++  +     .+++++  +|.|++ ++ +||+||+.++++|+.|+....+....        ...+|.++|||
T Consensus         1 mka~~~~~~--~-----~~~~~~--~~~p~~-~~-~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e   69 (350)
T cd08256           1 MRAVVCHGP--Q-----DYRLEE--VPVPRP-GP-GEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHE   69 (350)
T ss_pred             CeeEEEecC--C-----ceEEEE--CCCCCC-CC-CeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcc
Confidence            589999765  2     245554  666655 77 99999999999999998877764211        11457789999


Q ss_pred             eeeceEEEEecCCCC--CCCCCCEEEe---------------------------c-----cCcceeEeecCCCcceeccC
Q 019042           81 LSGYGVSKVLDSTHP--NYKKDDLVWG---------------------------L-----TSWEEYSLIQSPQHLIKILD  126 (347)
Q Consensus        81 ~~g~G~v~~vG~~v~--~~~vGd~V~~---------------------------~-----g~~~~~~~~~~~~~~~~i~P  126 (347)
                        ++|+|+++|++++  .+++||+|++                           +     |+|++|++++++..++++ |
T Consensus        70 --~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P  146 (350)
T cd08256          70 --FVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-P  146 (350)
T ss_pred             --eeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-C
Confidence              6669999999999  8999999986                           3     789999999988537899 9


Q ss_pred             CCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCC
Q 019042          127 TNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFD  205 (347)
Q Consensus       127 ~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~  205 (347)
                      ++++.. .++.+ .++.++|.++ ...++.+|++|+|.| .|++|++++|+|+++|++ ++++++++++.+.++ ++|++
T Consensus       147 ~~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~  221 (350)
T cd08256         147 DDIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGAD  221 (350)
T ss_pred             CCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCc
Confidence            995543 46666 8889999998 678999999999955 699999999999999984 677888888888888 89998


Q ss_pred             eeEecCChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHH-Hhccce
Q 019042          206 DAFNYKKEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQV-VGKRIR  282 (347)
Q Consensus       206 ~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~  282 (347)
                      +++++... ++.+.+.+++++ ++|++||++|+ ..+..++++++++|+++.+|.....      .......+ ..++++
T Consensus       222 ~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~  294 (350)
T cd08256         222 VVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIGDRKELD  294 (350)
T ss_pred             EEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChhHhhcccccE
Confidence            88888765 788888888776 89999999995 5788999999999999999864311      11222222 356677


Q ss_pred             eeeeEecccccchHHHHHHHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          283 MEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       283 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +.++....      ..+++++++++++.+++.  +...|+++++++|++.+.+++..+|+++
T Consensus       295 i~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         295 VLGSHLGP------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             EEEeccCc------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            77765432      457889999999999874  6788999999999999999888889874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.1e-35  Score=272.21  Aligned_cols=307  Identities=19%  Similarity=0.224  Sum_probs=245.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      +||+++.++  +.+    +++++  +|.|.+ ++ +||+||+.++++|+.|++...+...  ..+|.++|||+  +|+|+
T Consensus         1 ~~a~~~~~~--~~~----~~~~~--~~~p~~-~~-~~vlv~v~~~~i~~~d~~~~~g~~~--~~~~~i~g~e~--~G~V~   66 (365)
T cd05279           1 CKAAVLWEK--GKP----LSIEE--IEVAPP-KA-GEVRIKVVATGVCHTDLHVIDGKLP--TPLPVILGHEG--AGIVE   66 (365)
T ss_pred             CceeEEecC--CCC----cEEEE--eecCCC-CC-CeEEEEEEEeeecchhHHHhcCCCC--CCCCcccccce--eEEEE
Confidence            478888776  443    45655  566655 67 9999999999999999988777542  34678999994  45999


Q ss_pred             EecCCCCCCCCCCEEEec---------------------------------------------------cCcceeEeecC
Q 019042           89 VLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYSLIQS  117 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~~~~  117 (347)
                      ++|++++.+++||+|+++                                                   |+|++|+++++
T Consensus        67 ~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  146 (365)
T cd05279          67 SIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSE  146 (365)
T ss_pred             EeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecC
Confidence            999999999999999864                                                   57999999999


Q ss_pred             CCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHH
Q 019042          118 PQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVN  196 (347)
Q Consensus       118 ~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~  196 (347)
                      +. ++++ |++++.. +++.++.++.+||+++...+++.+|++|+|+| +|++|++++|+|++.|++ |+++++++++.+
T Consensus       147 ~~-~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~  222 (365)
T cd05279         147 IS-LAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFE  222 (365)
T ss_pred             Cc-eEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence            98 9999 9995554 58888889999999987888999999999997 599999999999999995 777777999999


Q ss_pred             HHHHHhCCCeeEecCChh-hHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhc-cCCEEEEEcccccccCCCCccccch
Q 019042          197 LLKNKFGFDDAFNYKKEP-DLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMR-IHGRIAVCGMISQYNLEKPEGVHNL  273 (347)
Q Consensus       197 ~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~  273 (347)
                      .++ ++|++++++..+.+ ++.+.+++++++++|++||++|. ..+..++++++ ++|+++.+|.....    ....++.
T Consensus       223 ~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----~~~~~~~  297 (365)
T cd05279         223 KAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG----TEATLDP  297 (365)
T ss_pred             HHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCC----CceeeCH
Confidence            998 99998888876531 46677777775689999999986 78899999999 99999998864311    1122334


Q ss_pred             HHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          274 MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       274 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      ..+ .++.++.|+....+  ...+.+.+++++++++.+++  ...++++++++++|++.+.+++.. |+++
T Consensus       298 ~~~-~~~~~l~g~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         298 NDL-LTGRTIKGTVFGGW--KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             HHH-hcCCeEEEEeccCC--chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            444 56777777654432  22577889999999999875  477888999999999998877654 6665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1e-35  Score=267.76  Aligned_cols=310  Identities=20%  Similarity=0.229  Sum_probs=246.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||++++.+.  +.+  ..+.+.  +.+.|.+ ++ +||+||++++++|+.|+....+... ....|.++|||  +.|+|+
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~--~~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e--~~G~v~   69 (320)
T cd08243           1 MKAIVIEQP--GGP--EVLKLR--EIPIPEP-KP-GWVLIRVKAFGLNRSEIFTRQGHSP-SVKFPRVLGIE--AVGEVE   69 (320)
T ss_pred             CeEEEEcCC--CCc--cceEEe--ecCCCCC-CC-CEEEEEEEEEecCHHHHHHhcCCCC-CCCCCccccce--eEEEEE
Confidence            588888766  544  334443  4555544 77 9999999999999999887776432 23447889999  445999


Q ss_pred             EecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCC
Q 019042           89 VLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGE  159 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  159 (347)
                      .+|.  ..+++||+|+++         |+|++|+.+++.. ++++ |++++.. ++++++.++.+||+++.....+.+|+
T Consensus        70 ~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~  144 (320)
T cd08243          70 EAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQ-VYAI-DSDLSWA-ELAALPETYYTAWGSLFRSLGLQPGD  144 (320)
T ss_pred             EecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHH-cEeC-CCCCCHH-HHHhcchHHHHHHHHHHHhcCCCCCC
Confidence            9995  579999999986         7899999999988 9999 9995544 58899999999999998878899999


Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchh
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM  239 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  239 (347)
                      +|+|+|++|++|++++|+|++.|++|+++++++++.+.++ ++|++++++. .. ++.+.+.++ ++++|+++||+|+..
T Consensus       145 ~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl~~~~~~~  220 (320)
T cd08243         145 TLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKVLELVGTAT  220 (320)
T ss_pred             EEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEEECCChHH
Confidence            9999999999999999999999999999999999999998 8999887754 43 677778777 558999999999988


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceee
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      +..++++++++|+++.+|....... ...........+.+++++.++....   ...+.++.+++++.++.+++.....+
T Consensus       221 ~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (320)
T cd08243         221 LKDSLRHLRPGGIVCMTGLLGGQWT-LEDFNPMDDIPSGVNLTLTGSSSGD---VPQTPLQELFDFVAAGHLDIPPSKVF  296 (320)
T ss_pred             HHHHHHHhccCCEEEEEccCCCCcc-cCCcchhhhhhhccceEEEecchhh---hhHHHHHHHHHHHHCCceecccccEE
Confidence            9999999999999999987532210 0000011111235677777665433   22457888999999999987777889


Q ss_pred             ccccHHHHHHHhHcCCCcceEEE
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +++++++|++.+.++...||+++
T Consensus       297 ~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         297 TFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             cHHHHHHHHHHHHhCCCCCcEEe
Confidence            99999999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-35  Score=269.27  Aligned_cols=305  Identities=20%  Similarity=0.209  Sum_probs=238.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCC--CCCcccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD--KPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~--~~~~~~p~v~G~e~~g~G~   86 (347)
                      ||+++++++  +..    +++.  ++|.|.| ++ +||+||+.++++|++|+..+.+..  .....+|.++|||  ++|+
T Consensus         1 ~~~~~~~~~--~~~----~~~~--~~~~p~~-~~-~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e--~~G~   68 (341)
T PRK05396          1 MKALVKLKA--EPG----LWLT--DVPVPEP-GP-NDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHE--FVGE   68 (341)
T ss_pred             CceEEEecC--CCc----eEEE--ECCCCCC-CC-CeEEEEEEEEEEcccchHhhcCCCcccccCCCCccccee--eEEE
Confidence            489999776  432    3444  4666655 77 999999999999999988655421  1123467899999  5569


Q ss_pred             EEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccc
Q 019042           87 SKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa  136 (347)
                      |+++|++++++++||+|++.                              |+|++|+.++.+. ++++ |++++.. +++
T Consensus        69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-P~~l~~~-~~~  145 (341)
T PRK05396         69 VVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFN-VWKI-PDDIPDD-LAA  145 (341)
T ss_pred             EEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHH-eEEC-cCCCCHH-HhH
Confidence            99999999999999999974                              7899999999988 9999 9995443 343


Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                       +...+.++++++..  ...+|++|+|+| .|++|++++|+|++.|+ +|+++++++++.++++ ++|+++++++++. +
T Consensus       146 -~~~~~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~~-~  219 (341)
T PRK05396        146 -IFDPFGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAKE-D  219 (341)
T ss_pred             -hhhHHHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-c
Confidence             44566666665533  346899999987 59999999999999999 6888888888888888 8999999988875 7


Q ss_pred             HHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccccc
Q 019042          216 LDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYH  293 (347)
Q Consensus       216 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  293 (347)
                      +.+.+++++.+ ++|++|||.|+ ..+..++++++++|+++.+|.....      .......+..+++++.++....   
T Consensus       220 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~---  290 (341)
T PRK05396        220 LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD------MAIDWNKVIFKGLTIKGIYGRE---  290 (341)
T ss_pred             HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------CcccHHHHhhcceEEEEEEccC---
Confidence            88888888765 89999999986 5789999999999999999875421      1122455666778877764222   


Q ss_pred             chHHHHHHHHHHHHcC-CcccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          294 QYPKFLELVMPAIKEG-KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                       ..+.+..+.+++.++ ++.+.+.+.++++++.+|++.+.++. .||++++|+
T Consensus       291 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        291 -MFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             -ccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence             234566788888888 45556778889999999999998876 799999875

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.7e-35  Score=267.12  Aligned_cols=302  Identities=19%  Similarity=0.187  Sum_probs=245.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +     .+++.  ++|.|.+ ++ +||+||+.++++|+.|+....+.... ...|.++|+|++  |+|+
T Consensus         1 ~~a~~~~~~--~-----~~~~~--~~~~~~~-~~-~~v~v~v~~~~l~~~d~~~~~~~~~~-~~~~~~~g~e~~--G~V~   66 (337)
T cd08261           1 MKALVCEKP--G-----RLEVV--DIPEPVP-GA-GEVLVRVKRVGICGSDLHIYHGRNPF-ASYPRILGHELS--GEVV   66 (337)
T ss_pred             CeEEEEeCC--C-----ceEEE--ECCCCCC-CC-CeEEEEEEEEeEcccChHHHcCCCCc-CCCCcccccccE--EEEE
Confidence            588999765  2     23444  4666655 67 99999999999999998877765432 234778999954  5999


Q ss_pred             EecCCCCCCCCCCEEEe------------------------------ccCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++++++||+|++                              .|+|++|++++++  ++++ |++++.. +++.+
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~-p~~~~~~-~aa~~  142 (337)
T cd08261          67 EVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD--ALLV-PEGLSLD-QAALV  142 (337)
T ss_pred             EeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh--eEEC-CCCCCHH-Hhhhh
Confidence            99999999999999986                              3789999999986  8899 9995443 45555


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                       ..+.+|++++ ...++.+|++|||+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++.+. ++.+
T Consensus       143 -~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~  217 (337)
T cd08261         143 -EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE-DVAA  217 (337)
T ss_pred             -chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCccc-CHHH
Confidence             5778888887 678999999999997 599999999999999999999999999999997 8999999998876 7888


Q ss_pred             HHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchH
Q 019042          219 ALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP  296 (347)
Q Consensus       219 ~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  296 (347)
                      .+.+.+++ ++|++|||+|+ ..+..++++++++|+++.++.....      ...+...+..+++++.+..     ....
T Consensus       218 ~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~------~~~~~~~~~~~~~~~~~~~-----~~~~  286 (337)
T cd08261         218 RLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP------VTFPDPEFHKKELTILGSR-----NATR  286 (337)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC------CccCHHHHHhCCCEEEEec-----cCCh
Confidence            88888776 89999999986 6788999999999999998864311      1123334555677776653     1335


Q ss_pred             HHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcC-CCcceEEEEe
Q 019042          297 KFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTG-QNVGKQLVVV  344 (347)
Q Consensus       297 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~-~~~gkivi~~  344 (347)
                      +.++++.+++++|.+++  .+...++++++.++++.+.++ ...+|+|++|
T Consensus       287 ~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         287 EDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             hhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            67899999999999987  677788999999999999988 4789999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.4e-35  Score=268.94  Aligned_cols=298  Identities=18%  Similarity=0.150  Sum_probs=244.5

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      |+|++++.  + .+   +.++  +++.|.+ ++ +||+||+.++++|+.|+....+... ...+|.++|||  ++|+|+.
T Consensus         1 ~~~~~~~~--~-~~---~~~~--~~~~p~~-~~-~evlirv~a~~i~~~d~~~~~g~~~-~~~~p~~~g~e--~~G~V~~   67 (337)
T cd05283           1 KGYAARDA--S-GK---LEPF--TFERRPL-GP-DDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHE--IVGIVVA   67 (337)
T ss_pred             CceEEecC--C-CC---ceEE--eccCCCC-CC-CeEEEEEEEecccchHHHHhcCCcC-CCCCCcccCcc--eeeEEEE
Confidence            57888776  3 32   4444  4666655 77 9999999999999999988877542 23458899999  5569999


Q ss_pred             ecCCCCCCCCCCEEEe--------------------------------------ccCcceeEeecCCCcceeccCCCCCc
Q 019042           90 LDSTHPNYKKDDLVWG--------------------------------------LTSWEEYSLIQSPQHLIKILDTNVPL  131 (347)
Q Consensus        90 vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~  131 (347)
                      +|++++++++||+|+.                                      .|+|++|+.++.+. ++++ |++++.
T Consensus        68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~  145 (337)
T cd05283          68 VGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF-VFKI-PEGLDS  145 (337)
T ss_pred             ECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh-eEEC-CCCCCH
Confidence            9999999999999972                                      26899999999998 9999 999555


Q ss_pred             cccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          132 SYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       132 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                      . +++.+++.+.+||+++.. ..+.+|++++|.| .|++|++++++|++.|++|+++++++++.+.++ ++|++.+++..
T Consensus       146 ~-~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~  221 (337)
T cd05283         146 A-AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFIATK  221 (337)
T ss_pred             H-HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEecCc
Confidence            4 588899999999999866 4689999999977 699999999999999999999999999999998 89998888776


Q ss_pred             ChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          212 KEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      .. ++...    ..+++|++|||+|.. .+..++++++++|+++.+|.....      ...+...++.+++++.+.....
T Consensus       222 ~~-~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~  290 (337)
T cd05283         222 DP-EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSLIGG  290 (337)
T ss_pred             ch-hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEecccC
Confidence            53 33222    234799999999986 589999999999999999875321      1234555667899999887665


Q ss_pred             cccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          291 FYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                           .+.++.+++++.++++++.+ ..++++++++||+.+.+++..||+|++
T Consensus       291 -----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         291 -----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             -----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence                 57789999999999998764 678999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.4e-35  Score=267.97  Aligned_cols=302  Identities=20%  Similarity=0.181  Sum_probs=235.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC----------CCcccCCCCC
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK----------PSFVASFNPG   78 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~----------~~~~~p~v~G   78 (347)
                      |||++++.+    +    ++++  ++|.|.+ ++ +||+||+.++++|+.|+....+...          ....+|.++|
T Consensus         1 m~a~~~~~~----~----~~~~--~~~~p~~-~~-~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g   68 (341)
T cd08262           1 MRAAVFRDG----P----LVVR--DVPDPEP-GP-GQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLG   68 (341)
T ss_pred             CceEEEeCC----c----eEEE--ecCCCCC-CC-CeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccc
Confidence            578888543    2    4454  4666765 77 9999999999999999887766321          1223478899


Q ss_pred             CceeeceEEEEecCCCCC-CCCCCEEEec--------------------cCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           79 EPLSGYGVSKVLDSTHPN-YKKDDLVWGL--------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        79 ~e~~g~G~v~~vG~~v~~-~~vGd~V~~~--------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      +|  ++|+|+++|+++++ +++||+|+++                    |+|++|++++++. ++++ |++++.  +.++
T Consensus        69 ~e--~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~s~--~~a~  142 (341)
T cd08262          69 HE--FCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEAL-LLRV-PDGLSM--EDAA  142 (341)
T ss_pred             cc--eeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHH-eEEC-CCCCCH--HHhh
Confidence            99  55699999999997 9999999975                    7899999999988 9999 999544  3344


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      ++..+.+||+++ ..+++++|++|+|+| +|++|++++|+|+++|++ ++++++++++.+.++ ++|++++++++.. +.
T Consensus       143 ~~~~~~~a~~~~-~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~  218 (341)
T cd08262         143 LTEPLAVGLHAV-RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SP  218 (341)
T ss_pred             hhhhHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CH
Confidence            778889999986 678999999999997 499999999999999996 666777888888888 8999888887653 22


Q ss_pred             HH---HHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc
Q 019042          217 DA---ALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF  291 (347)
Q Consensus       217 ~~---~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  291 (347)
                      .+   .+.+.+++ ++|++||++|+ ..+..++++++++|+++.+|.....      ..........+++++.+..... 
T Consensus       219 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-  291 (341)
T cd08262         219 FAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES------DNIEPALAIRKELTLQFSLGYT-  291 (341)
T ss_pred             HHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC------CccCHHHHhhcceEEEEEeccc-
Confidence            11   34444444 89999999988 4788899999999999999875321      0112222245667766544332 


Q ss_pred             ccchHHHHHHHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          292 YHQYPKFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       292 ~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                          .+.++++.+++++|.+.+.  +.+.+++++++++++.+.+++..||+|++
T Consensus       292 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         292 ----PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             ----HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence                4578889999999999753  46788999999999999999989999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3.3e-35  Score=267.19  Aligned_cols=307  Identities=21%  Similarity=0.251  Sum_probs=245.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||||++.+.  +     .+.++.  .|.|.+ ++ +||+||+.++++|+.|+....+.+  ...+|.++|+|  ++|+|+
T Consensus         1 ~~a~~~~~~--~-----~l~~~~--~~~~~l-~~-~~v~v~v~~~~~n~~d~~~~~~~~--~~~~~~~~g~~--~~G~V~   65 (343)
T cd08236           1 MKALVLTGP--G-----DLRYED--IPKPEP-GP-GEVLVKVKACGICGSDIPRYLGTG--AYHPPLVLGHE--FSGTVE   65 (343)
T ss_pred             CeeEEEecC--C-----ceeEEe--cCCCCC-CC-CeEEEEEEEEEECccchHhhcCCC--CCCCCcccCcc--eEEEEE
Confidence            589999876  2     245544  566644 77 999999999999999988776644  23457889999  556999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++.+++||+|+++                              |+|++|++++++. ++++ |++++.. +++.+
T Consensus        66 ~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-P~~~~~~-~aa~~  142 (343)
T cd08236          66 EVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARN-LIKI-PDHVDYE-EAAMI  142 (343)
T ss_pred             EECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHH-eEEC-cCCCCHH-HHHhc
Confidence            999999999999999985                              7899999999998 9999 9995443 45555


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                       ..+.+||+++. ...+.++++|+|+| +|.+|++++|+|+++|++ |+++++++++.+.++ ++|++.++++++. . .
T Consensus       143 -~~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~~-~-~  216 (343)
T cd08236         143 -EPAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE-D-V  216 (343)
T ss_pred             -chHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCccc-c-H
Confidence             67889999985 67899999999997 599999999999999996 999999999989887 8999889988775 5 6


Q ss_pred             HHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccch
Q 019042          218 AALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY  295 (347)
Q Consensus       218 ~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  295 (347)
                      +++....++ ++|++|||.|+ ..+..++++++++|+++.+|.....   ...........+.+++++.++.........
T Consensus       217 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (343)
T cd08236         217 EKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSYSAPFP  293 (343)
T ss_pred             HHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeeccccccc
Confidence            777777766 79999999986 5788999999999999999864321   011122334456778888887664332234


Q ss_pred             HHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHc-CCCcceEEE
Q 019042          296 PKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFT-GQNVGKQLV  342 (347)
Q Consensus       296 ~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~-~~~~gkivi  342 (347)
                      .+.++++.++++++.+.  +.+...+++++++++++.+.+ +...||+|+
T Consensus       294 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         294 GDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            56788899999999986  446678899999999999998 667789874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=3.2e-35  Score=264.39  Aligned_cols=314  Identities=25%  Similarity=0.338  Sum_probs=256.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.+.  +.+  ..+.++.  .+.|.+ .+ ++|+||+.++++|+.|+....+........|.++|||  ++|+|+
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~~--~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e--~~G~v~   70 (323)
T cd05276           1 MKAIVIKEP--GGP--EVLELGE--VPKPAP-GP-GEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLE--VAGVVV   70 (323)
T ss_pred             CeEEEEecC--CCc--ccceEEe--cCCCCC-CC-CEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccce--eEEEEE
Confidence            589999876  555  3455544  555533 67 9999999999999999887766543334457899999  556999


Q ss_pred             EecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           89 VLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      .+|++++.+++||+|+++   |+|++|+.++.+. ++++ |++++.. ++++++..+.+||+++.....+.++++++|+|
T Consensus        71 ~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g  147 (323)
T cd05276          71 AVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQ-LLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAGETVLIHG  147 (323)
T ss_pred             eeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHH-hccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence            999999999999999987   7899999999988 9999 9985443 58889999999999988778899999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVL  244 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~  244 (347)
                      ++|++|+++++++++.|++|+++++++++.+.++ ++|++.+++.... ++.+.+.+.+.+ ++|++||+.|+..+..++
T Consensus       148 ~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~  225 (323)
T cd05276         148 GASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNL  225 (323)
T ss_pred             CcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCchHHHHHHH
Confidence            9999999999999999999999999999999997 8998888887765 777788777765 899999999988788899


Q ss_pred             HhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-----ccchHHHHHHHHHHHHcCCcccccceee
Q 019042          245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       245 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      ++++++|+++.++......     ...+...++.+++++.++.....     +....+.++++.+++.++++.+..+..|
T Consensus       226 ~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (323)
T cd05276         226 RALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVF  300 (323)
T ss_pred             HhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEE
Confidence            9999999999998654321     12234444568888888765442     2223456778889999999987778889


Q ss_pred             ccccHHHHHHHhHcCCCcceEEE
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      ++++++++++.+.++...||+++
T Consensus       301 ~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         301 PLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             cHHHHHHHHHHHHhCCCcceEeC
Confidence            99999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=4.9e-35  Score=263.57  Aligned_cols=315  Identities=25%  Similarity=0.353  Sum_probs=258.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||++++.++  +.|  ..  ++..++|.|.+ .+ ++|+|++.++++|+.|+....+........|+++|||++  |+|+
T Consensus         1 ~~~~~~~~~--~~~--~~--~~~~~~~~~~l-~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~--G~v~   70 (325)
T cd08253           1 MRAIRYHEF--GAP--DV--LRLGDLPVPTP-GP-GEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGA--GVVE   70 (325)
T ss_pred             CceEEEccc--CCc--cc--ceeeecCCCCC-CC-CEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceE--EEEE
Confidence            488888876  554  22  44445677755 67 999999999999999988777654334456889999955  5999


Q ss_pred             EecCCCCCCCCCCEEEec--------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           89 VLDSTHPNYKKDDLVWGL--------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~--------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                      .+|++++++++||+|+++        |++++|+.++.+. ++++ |++++.. ++++++.++.+||+++....++.+|++
T Consensus        71 ~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~g~~  147 (325)
T cd08253          71 AVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQ-LVPL-PDGVSFE-QGAALGIPALTAYRALFHRAGAKAGET  147 (325)
T ss_pred             eeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHH-cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhCCCCCCE
Confidence            999999999999999985        6899999999988 9999 9995544 588999999999999988789999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchh
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKM  239 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~  239 (347)
                      ++|+|++|++|+++++++++.|++|+++++++++.+.++ ++|++++++.... ++.+.+.+.+.+ ++|++++|.++..
T Consensus       148 vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~  225 (325)
T cd08253         148 VLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVIIEVLANVN  225 (325)
T ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEEECCchHH
Confidence            999999999999999999999999999999999999998 8999888888765 777778777765 8999999999888


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCccccccee
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVEDIA  318 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~  318 (347)
                      ....+++++++|+++.++....      ........++.++.++.+...... +....+.++.+.+++.++.+++.....
T Consensus       226 ~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (325)
T cd08253         226 LAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIARE  299 (325)
T ss_pred             HHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccE
Confidence            8888999999999999987431      011233334567777777654332 344556778888899999888777788


Q ss_pred             eccccHHHHHHHhHcCCCcceEEEEe
Q 019042          319 EGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       319 ~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++++++.++++.+.++...||+++++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         300 YPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             EcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            99999999999999888899999863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=6e-35  Score=263.46  Aligned_cols=311  Identities=18%  Similarity=0.190  Sum_probs=245.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  |.|  +.+++++  +|.|.| ++ +||+||+.++++|+.|.....+.......+|.++|||++  |+|+
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~p~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~--G~V~   70 (324)
T cd08288           1 FKALVLEKD--DGG--TSAELRE--LDESDL-PE-GDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLA--GTVV   70 (324)
T ss_pred             CeeEEEecc--CCC--cceEEEE--CCCCCC-CC-CeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceE--EEEE
Confidence            689999887  665  3455555  666655 77 999999999999999988776644222345788999954  5887


Q ss_pred             EecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhh--hcCCC-
Q 019042           89 VLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYE--LCSPK-  156 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~-  156 (347)
                      .  ++++.+++||+|+++         |+|++|++++.+. ++++ |++++.. +++.++..+++|+.++..  ..... 
T Consensus        71 ~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~  145 (324)
T cd08288          71 E--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADW-LVPL-PEGLSAR-QAMAIGTAGFTAMLCVMALEDHGVTP  145 (324)
T ss_pred             e--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHH-eeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhhcCcCC
Confidence            7  777889999999984         7899999999988 9999 9995554 588889999999877641  13445 


Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++++|+|+|++|++|++++|+|+++|++|++++.++++.+.++ ++|+++++++++.   ...++.++.+++|.++|+++
T Consensus       146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~  221 (324)
T cd08288         146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL---SEPGRPLQKERWAGAVDTVG  221 (324)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh---hHhhhhhccCcccEEEECCc
Confidence            5789999999999999999999999999999999999999998 9999999987643   33555565557899999999


Q ss_pred             chhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCccccc
Q 019042          237 GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVE  315 (347)
Q Consensus       237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~  315 (347)
                      +..+...+..++.+|+++.+|......     ...+...++.+++++.+...... .....+.+..+.+++..+.+++ +
T Consensus       222 ~~~~~~~~~~~~~~g~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i  295 (324)
T cd08288         222 GHTLANVLAQTRYGGAVAACGLAGGAD-----LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-L  295 (324)
T ss_pred             HHHHHHHHHHhcCCCEEEEEEecCCCC-----CCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-c
Confidence            867778888999999999998752110     11233444478899888764333 2234567888888998998876 4


Q ss_pred             ceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          316 DIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       316 ~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ...++++++++|++.+.+++..||+++++
T Consensus       296 ~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         296 TREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            67889999999999999999999999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=4.9e-35  Score=265.33  Aligned_cols=313  Identities=19%  Similarity=0.167  Sum_probs=250.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +.++ +...++..++|.|.+ .+ ++|+||+.++++|++|+....+... ...+|.++|||  +.|+|+
T Consensus         1 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e--~~G~v~   72 (336)
T cd08252           1 MKAIGFTQP--LPIT-DPDSLIDIELPKPVP-GG-RDLLVRVEAVSVNPVDTKVRAGGAP-VPGQPKILGWD--ASGVVE   72 (336)
T ss_pred             CceEEecCC--CCCC-cccceeEccCCCCCC-CC-CEEEEEEEEEEcCHHHHHHHcCCCC-CCCCCcccccc--eEEEEE
Confidence            479999988  6652 101255555777765 66 9999999999999999887666432 23457789999  456999


Q ss_pred             EecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCC-----
Q 019042           89 VLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKK-----  157 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~-----  157 (347)
                      .+|++++.+++||+|+++      |+|++|+.++.+. ++++ |++++.. +++.++..+.+||.++.+.+.+.+     
T Consensus        73 ~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~  149 (336)
T cd08252          73 AVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERI-VGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGISEDAENE  149 (336)
T ss_pred             EcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHH-eeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCCCCCcCCC
Confidence            999999999999999986      6899999999988 9999 9985554 578889999999999877788887     


Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      |++|+|+|++|++|++++|+|+.+| ++|+++++++++.+.++ ++|+++++++..  ++.+.+....++++|++|||+|
T Consensus       150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~~~~  226 (336)
T cd08252         150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFCLTD  226 (336)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEEccC
Confidence            9999999988999999999999999 89999999999999998 899988888764  5666666544348999999998


Q ss_pred             c-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-------ccchHHHHHHHHHHHHc
Q 019042          237 G-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-------YHQYPKFLELVMPAIKE  308 (347)
Q Consensus       237 ~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~  308 (347)
                      + ..+..++++++++|+++.+|...        ...+...++.+++++.+..+...       +....+.++++.+++.+
T Consensus       227 ~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (336)
T cd08252         227 TDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDA  298 (336)
T ss_pred             cHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHC
Confidence            6 68899999999999999998642        11233344467888877654321       11334678889999999


Q ss_pred             CCcccccce---eeccccHHHHHHHhHcCCCcceEEEE
Q 019042          309 GKLVYVEDI---AEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       309 g~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      |.+.+....   .++++++++|++.+.++...||++++
T Consensus       299 ~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         299 GKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             CCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            999875432   46999999999999999888999863

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-34  Score=263.57  Aligned_cols=310  Identities=25%  Similarity=0.320  Sum_probs=254.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.+.  +.+  ..+.++.  .+.|.+ .+ ++|+|++.++++|+.|+....+.......+|.++|||  ++|+|+
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e--~~G~v~   70 (342)
T cd08266           1 MKAVVIRGH--GGP--EVLEYGD--LPEPEP-GP-DEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSD--GAGVVE   70 (342)
T ss_pred             CeEEEEecC--CCc--cceeEee--cCCCCC-CC-CeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccc--eEEEEE
Confidence            578988765  555  3445544  555544 67 9999999999999999887776443233457899999  556999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++.+++||+|+++                              |++++|++++.+. ++++ |++++.. +++++
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~a~~~  147 (342)
T cd08266          71 AVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARN-LLPI-PDNLSFE-EAAAA  147 (342)
T ss_pred             EeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHH-ceeC-CCCCCHH-HHHhh
Confidence            999999999999999874                              5789999999988 9999 9985444 57888


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                      +..+.+||+++.+...+.++++++|+|+++++|++++++++..|++|+.+++++++.+.++ .++.+.+++..+. ++.+
T Consensus       148 ~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~  225 (342)
T cd08266         148 PLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRKE-DFVR  225 (342)
T ss_pred             hhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecCCh-HHHH
Confidence            8899999999888889999999999999889999999999999999999999999989887 7888777877665 6767


Q ss_pred             HHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHH
Q 019042          219 ALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK  297 (347)
Q Consensus       219 ~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  297 (347)
                      .+.+.+.+ ++|++++++|...+..++++++++|+++.++.....     ....+....+.+++++.+.....     ..
T Consensus       226 ~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~  295 (342)
T cd08266         226 EVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT-----KA  295 (342)
T ss_pred             HHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC-----HH
Confidence            77776655 899999999988889999999999999999875432     11233335567788888776544     56


Q ss_pred             HHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          298 FLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       298 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      .+.++.++++++.+.+.+...|+++++++|++.+.++...+|++++
T Consensus       296 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         296 ELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             HHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence            7888999999999988888889999999999999988888999986

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=8.6e-35  Score=264.72  Aligned_cols=303  Identities=17%  Similarity=0.167  Sum_probs=242.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++       +.+++++  +|.|.|.++ +||+||+.++++|++|+....+...  ..+|.++|||  ++|+|+
T Consensus         1 m~~~~~~~~-------~~~~~~~--~~~p~~~~~-~ev~V~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e--~~G~V~   66 (345)
T cd08287           1 MRATVIHGP-------GDIRVEE--VPDPVIEEP-TDAVIRVVATCVCGSDLWPYRGVSP--TRAPAPIGHE--FVGVVE   66 (345)
T ss_pred             CceeEEecC-------CceeEEe--CCCCCCCCC-CeEEEEEeeeeecccchhhhcCCCC--CCCCcccccc--eEEEEE
Confidence            589999765       2345554  666665467 9999999999999999887776542  2457899999  556999


Q ss_pred             EecCCCCCCCCCCEEEe-c-----------------------------cCcceeEeecCC--CcceeccCCCCCccc-c-
Q 019042           89 VLDSTHPNYKKDDLVWG-L-----------------------------TSWEEYSLIQSP--QHLIKILDTNVPLSY-Y-  134 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~-~-----------------------------g~~~~~~~~~~~--~~~~~i~P~~~~~~~-~-  134 (347)
                      ++|++++++++||+|++ +                             |+|++|++++.+  . ++++ |++++... . 
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~l~~~~~~~  144 (345)
T cd08287          67 EVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGT-LVKV-PGSPSDDEDLL  144 (345)
T ss_pred             EeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCc-eEEC-CCCCChhhhhh
Confidence            99999999999999986 1                             788999999975  6 9999 99965411 1 


Q ss_pred             --ccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          135 --TGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       135 --aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                        .+++...+.+||+++. ..++.+|++|+|.| +|++|++++|+|++.|++ ++++++++++.+.++ ++|+++++++.
T Consensus       145 ~~~~~l~~~~~~a~~~~~-~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~  221 (345)
T cd08287         145 PSLLALSDVMGTGHHAAV-SAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDIVAER  221 (345)
T ss_pred             hhhHhhhcHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceEecCC
Confidence              1234467899999984 57899999999977 699999999999999995 888888888888888 89999999988


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEec
Q 019042          212 KEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG  289 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  289 (347)
                      .. ++.+.+.+++++ ++|+++||+|+ ..+..++++++++|+++.++.....      ...+....+.+++++.+....
T Consensus       222 ~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~  294 (345)
T cd08287         222 GE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG------VELDVRELFFRNVGLAGGPAP  294 (345)
T ss_pred             cc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC------CccCHHHHHhcceEEEEecCC
Confidence            75 788888888776 89999999986 6889999999999999998865311      123343566788888774332


Q ss_pred             ccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          290 DFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                           ..+.++++++++.++.+++  .+...++++++++|++.+.++... |++|+
T Consensus       295 -----~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         295 -----VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             -----cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence                 2578999999999999986  356788999999999998876654 99985

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.7e-35  Score=263.54  Aligned_cols=302  Identities=24%  Similarity=0.254  Sum_probs=244.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +.+    +.++  ++|.|.+ .+ +||+|+++++++|+.|+....+.... ...|.++|||  +.|+|+
T Consensus         1 m~a~~~~~~--~~~----~~~~--~~~~p~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e--~~G~v~   67 (332)
T cd08259           1 MKAAILHKP--NKP----LQIE--EVPDPEP-GP-GEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHE--IVGTVE   67 (332)
T ss_pred             CeEEEEecC--CCc----eEEE--EccCCCC-CC-CeEEEEEEEEecchhhhHHhcCCCCC-CCCCeecccc--ceEEEE
Confidence            589999763  222    3444  4677765 77 99999999999999999887764432 3447899999  556999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++.+++||+|+++                              |+|++|++++.+. ++++ |++++.. +++.+
T Consensus        68 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~  144 (332)
T cd08259          68 EVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERS-LVKL-PDNVSDE-SAALA  144 (332)
T ss_pred             EECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhh-eEEC-CCCCCHH-HHhhh
Confidence            999999999999999974                              5799999999988 9999 9995554 58888


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                      +..+.+||+++.. ..+.++++++|+|++|++|+++++++++.|++|+++++++++.+.++ ++|.+.+++..   ++.+
T Consensus       145 ~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~  219 (332)
T cd08259         145 ACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS---KFSE  219 (332)
T ss_pred             ccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH---HHHH
Confidence            9999999999977 88999999999999999999999999999999999999998888887 88887777543   3555


Q ss_pred             HHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHH
Q 019042          219 ALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF  298 (347)
Q Consensus       219 ~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  298 (347)
                      .+.+..  ++|++++++|......++++++++|+++.++......     ..........++.++.++...     ..+.
T Consensus       220 ~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~  287 (332)
T cd08259         220 DVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDP-----APLRPGLLILKEIRIIGSISA-----TKAD  287 (332)
T ss_pred             HHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCC-----cCCCHHHHHhCCcEEEEecCC-----CHHH
Confidence            555543  5999999999888899999999999999998753221     111222333466666665322     2677


Q ss_pred             HHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          299 LELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       299 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      ++++.++++++.+++.+..+++++++++|++.+.++...||++++
T Consensus       288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         288 VEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            899999999999988888899999999999999998888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.4e-34  Score=263.21  Aligned_cols=304  Identities=19%  Similarity=0.197  Sum_probs=243.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +     .+.+++  .+.|.+ .+ ++|+||++++++|+.|+....+... ...+|.++|+|  ++|+|+
T Consensus         1 ~~~~~~~~~--~-----~~~~~~--~~~~~l-~~-~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~--~~G~V~   66 (343)
T cd08235           1 MKAAVLHGP--N-----DVRLEE--VPVPEP-GP-GEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHE--IAGEIV   66 (343)
T ss_pred             CeEEEEecC--C-----ceEEEE--ccCCCC-CC-CeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccc--eEEEEE
Confidence            589999776  3     245555  455544 66 9999999999999999987776442 23457889999  445999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCC----cceeccCCCCCcccc
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQ----HLIKILDTNVPLSYY  134 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~----~~~~i~P~~~~~~~~  134 (347)
                      .+|++++.+++||+|+++                              |+|++|++++++.    .++++ |++++.. +
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P~~~~~~-~  144 (343)
T cd08235          67 EVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-PDNVSFE-E  144 (343)
T ss_pred             eeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-CCCCCHH-H
Confidence            999999999999999974                              7899999999642    28899 9995443 3


Q ss_pred             ccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          135 TGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       135 aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      ++. ...+.+||+++.. .++.+|++|+|+| +|++|++++|+|++.|++ |+++++++++.+.++ ++|.++++++++.
T Consensus       145 aa~-~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~~  220 (343)
T cd08235         145 AAL-VEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDAAEE  220 (343)
T ss_pred             HHh-hhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecCCcc
Confidence            544 4788999999965 4899999999997 599999999999999998 999999999989888 8999999998876


Q ss_pred             hhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc
Q 019042          214 PDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF  291 (347)
Q Consensus       214 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  291 (347)
                       ++.+.+++.+++ ++|++|||.++ ..+..++++++++|+++.++......    ....+......+++.+.+..... 
T Consensus       221 -~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~-  294 (343)
T cd08235         221 -DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS----TVNIDPNLIHYREITITGSYAAS-  294 (343)
T ss_pred             -CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCC----CcccCHHHHhhCceEEEEEecCC-
Confidence             888888887776 79999999996 48889999999999999988643221    11223344555777776655433 


Q ss_pred             ccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          292 YHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       292 ~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                          .+.++.++++++++.+.+  .+..+++++++.++++.+.+++ .||+|++
T Consensus       295 ----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         295 ----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             ----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence                467888999999999863  4567889999999999999998 8999874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4e-34  Score=256.95  Aligned_cols=312  Identities=24%  Similarity=0.303  Sum_probs=253.0

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      ||+.+...  +.+  ..+.+.+  .+.|.+ ++ ++|+|++.++++|+.|.....+...  ..+|.++|||+  .|+|+.
T Consensus         1 ~~~~~~~~--~~~--~~~~~~~--~~~~~~-~~-~~v~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~--~G~v~~   68 (320)
T cd05286           1 KAVRIHKT--GGP--EVLEYED--VPVPEP-GP-GEVLVRNTAIGVNFIDTYFRSGLYP--LPLPFVLGVEG--AGVVEA   68 (320)
T ss_pred             CeEEEecC--CCc--cceEEee--cCCCCC-CC-CEEEEEEEEeecCHHHHHHhcCCCC--CCCCccCCcce--eEEEEE
Confidence            46776655  444  3344443  455533 67 9999999999999999887766432  24577899994  459999


Q ss_pred             ecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcC
Q 019042           90 LDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAA  166 (347)
Q Consensus        90 vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga  166 (347)
                      +|++++++++||+|+++   |++++|+.++.+. ++++ |++++.. ++++++..+++||.++....++.+|++|+|+|+
T Consensus        69 ~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~  145 (320)
T cd05286          69 VGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASR-LVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAA  145 (320)
T ss_pred             ECCCCCCCCCCCEEEEecCCCceeEEEEecHHH-ceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            99999999999999985   6999999999988 9999 9985444 577889999999999988889999999999999


Q ss_pred             CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHH
Q 019042          167 SGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLL  245 (347)
Q Consensus       167 ~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~  245 (347)
                      +|++|++++++++.+|++|+++++++++.+.++ ++|++++++..+. ++.+.+...+.+ ++|++|+|.++.....+++
T Consensus       146 ~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~  223 (320)
T cd05286         146 AGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLD  223 (320)
T ss_pred             CchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCcHhHHHHHH
Confidence            999999999999999999999999999999998 8999888887765 777888887766 8999999999888899999


Q ss_pred             hhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc---ccchHHHHHHHHHHHHcCCcccccceeeccc
Q 019042          246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF---YHQYPKFLELVMPAIKEGKLVYVEDIAEGLE  322 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  322 (347)
                      +++++|+++.+|.....     ....+...+..+++++.+.....+   +....+.++++.+++.++.+.+.....|+++
T Consensus       224 ~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  298 (320)
T cd05286         224 SLRPRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLA  298 (320)
T ss_pred             hhccCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHH
Confidence            99999999999864321     112233333377888876544332   3344567788999999999887777789999


Q ss_pred             cHHHHHHHhHcCCCcceEEEE
Q 019042          323 KAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       323 ~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++++++.+.++...+|++++
T Consensus       299 ~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         299 DAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             HHHHHHHHHHcCCCCceEEEe
Confidence            999999999988888999875

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-34  Score=262.02  Aligned_cols=313  Identities=22%  Similarity=0.255  Sum_probs=242.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      +||+++.+.  +.|  .++++++  .+.|.| .+ +||+|++.++++|+.|.....+.......+|.++|||++  |+|+
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~~--~~~~~~-~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~--G~v~   70 (331)
T cd08273           1 NREVVVTRR--GGP--EVLKVVE--ADLPEP-AA-GEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLV--GRVD   70 (331)
T ss_pred             CeeEEEccC--CCc--ccEEEec--cCCCCC-CC-CeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceE--EEEE
Confidence            489999887  666  3455554  555655 66 999999999999999988777654323346889999955  5999


Q ss_pred             EecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           89 VLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      .+|++++.+++||+|+++   |+|++|+.++.+. ++++ |++++.. ++++++..+.+||+++.....+.+|++|+|+|
T Consensus        71 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g  147 (331)
T cd08273          71 ALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKY-LVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHG  147 (331)
T ss_pred             EeCCCCccCCCCCEEEEeCCCcceeeEEEechHH-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEC
Confidence            999999999999999996   7999999999988 9999 9995554 57889999999999998778899999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL  245 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~  245 (347)
                      ++|++|++++++|+..|++|+++++ +++.+.++ ++|+.. ++.... ++...  ...++++|+++||+++.....+++
T Consensus       148 ~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~~~~~~~~  221 (331)
T cd08273         148 ASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVGGESYEESYA  221 (331)
T ss_pred             CCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCchHHHHHHHH
Confidence            9999999999999999999999997 88888887 899753 555443 44443  334457999999999977899999


Q ss_pred             hhccCCEEEEEcccccccCCCCccccch------------HHHHhccceeeeeEecc--cccchHHHHHHHHHHHHcCCc
Q 019042          246 NMRIHGRIAVCGMISQYNLEKPEGVHNL------------MQVVGKRIRMEGFLAGD--FYHQYPKFLELVMPAIKEGKL  311 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~g~~  311 (347)
                      +++++|+++.+|........ . ...+.            .....++++..+.....  .+....+.++.++++++++.+
T Consensus       222 ~l~~~g~~v~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l  299 (331)
T cd08273         222 ALAPGGTLVCYGGNSSLLQG-R-RSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKI  299 (331)
T ss_pred             HhcCCCEEEEEccCCCCCCc-c-ccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCc
Confidence            99999999999875432110 0 00000            01112223332222211  033456788999999999999


Q ss_pred             ccccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          312 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       312 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      .+.+...+++++++++++.+.++...||+|+
T Consensus       300 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         300 RPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             cCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            8877788999999999999998888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=1.8e-34  Score=263.20  Aligned_cols=320  Identities=19%  Similarity=0.180  Sum_probs=237.9

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      |++++.++  ++|    ++++..++|.|.++++ ++|+||+.++++|++|.....+........|.++|+|  +.|+|+.
T Consensus         2 ~~~~~~~~--~~~----~~~~~~~~~~p~~~~~-~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e--~~G~V~~   72 (352)
T cd08247           2 KALTFKNN--TSP----LTITTIKLPLPNCYKD-NEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRD--YSGVIVK   72 (352)
T ss_pred             ceEEEecC--CCc----ceeeccCCCCCCCCCC-CeEEEEEEEEecChHhHHHhcccccccccCCCccCce--eEEEEEE
Confidence            68999888  777    4788877777653477 9999999999999999876644221111237789999  5569999


Q ss_pred             ecCCCC-CCCCCCEEEec--------cCcceeEeecCC----CcceeccCCCCCccccccccCCchhhHHHHhhhhc-CC
Q 019042           90 LDSTHP-NYKKDDLVWGL--------TSWEEYSLIQSP----QHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELC-SP  155 (347)
Q Consensus        90 vG~~v~-~~~vGd~V~~~--------g~~~~~~~~~~~----~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~-~~  155 (347)
                      +|++++ .+++||+|+++        |+|++|++++..    . ++++ |++++.. +++.++..+.|||+++.... .+
T Consensus        73 vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~  149 (352)
T cd08247          73 VGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKS-ITRK-PENISLE-EAAAWPLVLGTAYQILEDLGQKL  149 (352)
T ss_pred             eCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccce-eEEC-CCCCCHH-HHHHhHHHHHHHHHHHHHhhhcc
Confidence            999998 89999999985        689999999987    5 8999 9985554 68888999999999997766 79


Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhh---HHHHHHH-HC-CCCc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD---LDAALKR-CF-PEGI  228 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~---~~~~i~~-~~-~~~~  228 (347)
                      ++|++|+|+|++|++|++++|+|++. |. +++++.+ +++.+.++ ++|+++++++++. +   +...+.+ .+ ++++
T Consensus       150 ~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~  226 (352)
T cd08247         150 GPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNK-KLGADHFIDYDAH-SGVKLLKPVLENVKGQGKF  226 (352)
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHH-HhCCCEEEecCCC-cccchHHHHHHhhcCCCCc
Confidence            99999999999999999999999987 55 6777764 55556777 8999889987765 4   4444444 44 2389


Q ss_pred             cEEEECCCc-hhHHHHHHhhc---cCCEEEEEcccccccCCC-Ccc----ccchHHHHhccceeeeeEeccc-ccchHHH
Q 019042          229 DIYFENVGG-KMLDAVLLNMR---IHGRIAVCGMISQYNLEK-PEG----VHNLMQVVGKRIRMEGFLAGDF-YHQYPKF  298 (347)
Q Consensus       229 d~vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~-~~~----~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~  298 (347)
                      |++|||.|+ .....++++++   ++|+++.++.....+... ...    .......+.++.++........ .....+.
T Consensus       227 d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (352)
T cd08247         227 DLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADW  306 (352)
T ss_pred             eEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHH
Confidence            999999998 67888999999   999999874321110000 000    0000111222332222211110 0011367


Q ss_pred             HHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          299 LELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       299 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++.+++++.++.+++.+.+.++++++++|++.+.++...||+++++
T Consensus       307 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         307 IEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             HHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            8889999999999887788899999999999999988899999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-33  Score=254.64  Aligned_cols=316  Identities=22%  Similarity=0.300  Sum_probs=256.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.+.  +.+  +.+.+.  +.+.|.+ ++ ++++|++.++++|+.|+....+.......+|.++|||+  .|+|+
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~--~~~~~~~-~~-~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~   70 (328)
T cd08268           1 MRAVRFHQF--GGP--EVLRIE--ELPVPAP-GA-GEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEA--AGVVE   70 (328)
T ss_pred             CeEEEEecc--CCc--ceeEEe--ecCCCCC-CC-CeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcce--EEEEE
Confidence            588899776  555  344554  4555544 77 99999999999999998877665443345578899994  45999


Q ss_pred             EecCCCCCCCCCCEEEec--------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           89 VLDSTHPNYKKDDLVWGL--------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~--------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                      .+|+++..+++||+|+++        |++++|+.++.+. ++++ |++++.. ++++++..+.+||.++.....+.++++
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~  147 (328)
T cd08268          71 AVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAA-VVKL-PDGLSFV-EAAALWMQYLTAYGALVELAGLRPGDS  147 (328)
T ss_pred             eeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHh-cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCE
Confidence            999999999999999986        6899999999998 9999 9995443 578899999999999987889999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchh
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKM  239 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~  239 (347)
                      ++|+|++|++|++++++++..|+++++++++.++.+.++ ++|.+.+++.... ++.+.+.+.+.+ ++|+++++.++..
T Consensus       148 vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~  225 (328)
T cd08268         148 VLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQ  225 (328)
T ss_pred             EEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEEECCchHh
Confidence            999999999999999999999999999999999999997 8898888887765 777777777765 7999999999988


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc---ccchHHHHHHHHHHHHcCCcccccc
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF---YHQYPKFLELVMPAIKEGKLVYVED  316 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~  316 (347)
                      ...++++++++|+++.+|.....     ....+....+.+++++.+......   +......++.+.+++.++.+.+...
T Consensus       226 ~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (328)
T cd08268         226 FAKLADALAPGGTLVVYGALSGE-----PTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVD  300 (328)
T ss_pred             HHHHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcc
Confidence            88999999999999999864321     112233335778888888765432   3344566777788888888887777


Q ss_pred             eeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          317 IAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       317 ~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ..|+++++.++++.+.+++..||+++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         301 RVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             cEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            8889999999999998888888999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.1e-34  Score=264.56  Aligned_cols=318  Identities=22%  Similarity=0.294  Sum_probs=239.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC--------------CCcccC
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK--------------PSFVAS   74 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~--------------~~~~~p   74 (347)
                      |||+++.++  |.|+ +.+.++  +.+.|.|.++ +||+||+.++++|++|+....+...              .....|
T Consensus         1 ~~a~~~~~~--~~~~-~~~~~~--~~~~p~~~~~-~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p   74 (350)
T cd08248           1 MKAWQIHSY--GGID-SLLLLE--NARIPVIRKP-NQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFP   74 (350)
T ss_pred             CceEEeccc--CCCc-ceeeec--ccCCCCCCCC-CeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCC
Confidence            689999887  7663 234444  4666766336 9999999999999999887766311              023458


Q ss_pred             CCCCCceeeceEEEEecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHH
Q 019042           75 FNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGG  148 (347)
Q Consensus        75 ~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~  148 (347)
                      .++|||  ++|+|+.+|++++++++||+|+++      |+|++|+.++++. ++++ |++++.. +++.++..+.+||++
T Consensus        75 ~~~G~e--~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~  149 (350)
T cd08248          75 LTLGRD--CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENE-VSKK-PKNLSHE-EAASLPYAGLTAWSA  149 (350)
T ss_pred             eeecce--eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHH-eecC-CCCCCHH-HHhhchhHHHHHHHH
Confidence            899999  456999999999999999999984      7899999999998 9999 9995544 588899999999999


Q ss_pred             hhhhcCCCC----CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC
Q 019042          149 LYELCSPKK----GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       149 l~~~~~~~~----~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      +.+...+.+    |++|+|+|++|++|++++++|+++|++|++++++ ++.+.++ ++|.+++++..+. ++.+.+... 
T Consensus       150 l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~-  225 (350)
T cd08248         150 LVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER-  225 (350)
T ss_pred             HHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc-
Confidence            877777654    9999999999999999999999999999988865 5667777 8999888887764 555555432 


Q ss_pred             CCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCC-CCc--cccc-hHHHHhccce-ee-ee--EecccccchH
Q 019042          225 PEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLE-KPE--GVHN-LMQVVGKRIR-ME-GF--LAGDFYHQYP  296 (347)
Q Consensus       225 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~--~~~~-~~~~~~~~~~-~~-g~--~~~~~~~~~~  296 (347)
                       +++|++||++|+.....++++++++|+++.++.....+.. ...  .... ...+...... +. ..  .... .....
T Consensus       226 -~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  303 (350)
T cd08248         226 -GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF-FSPSG  303 (350)
T ss_pred             -CCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE-ECCCH
Confidence             3799999999988899999999999999999864321100 000  0000 0011111100 00 00  0000 12236


Q ss_pred             HHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          297 KFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       297 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +.+.++++++.++.+.+.+...++++++.++++.+.++...+|++++
T Consensus       304 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         304 SALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            77999999999999988788899999999999999988878898863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6e-34  Score=262.32  Aligned_cols=295  Identities=20%  Similarity=0.174  Sum_probs=233.2

Q ss_pred             EEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCC------CCCcccCCCCCCceeeceEEEEecCCCCCCCCCCE
Q 019042           29 IITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD------KPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDL  102 (347)
Q Consensus        29 ~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~------~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~  102 (347)
                      ++..++|.|.+ ++ ++|+||+.++++|++|.+...+..      .....+|.++|||  ++|+|+.+|++++.+++||+
T Consensus        39 ~~~~~~~~p~~-~~-~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e--~~G~V~~vG~~v~~~~~Gd~  114 (384)
T cd08265          39 LRVEDVPVPNL-KP-DEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHE--FSGVVEKTGKNVKNFEKGDP  114 (384)
T ss_pred             EEEEECCCCCC-CC-CEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccc--eEEEEEEECCCCCCCCCCCE
Confidence            44445677766 77 999999999999999987665311      1123457899999  55699999999999999999


Q ss_pred             EEe------------------------------ccCcceeEeecCCCcceeccCCCCC-----ccccccccCCchhhHHH
Q 019042          103 VWG------------------------------LTSWEEYSLIQSPQHLIKILDTNVP-----LSYYTGILGMPGLTAYG  147 (347)
Q Consensus       103 V~~------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~-----~~~~aa~l~~~~~tA~~  147 (347)
                      |++                              .|+|++|+.++++. ++++ |++++     ..+++++++.++.+||+
T Consensus       115 V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~-~~~l-P~~~~~~~~~~~~~~a~~~~~~~ta~~  192 (384)
T cd08265         115 VTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARY-AWEI-NELREIYSEDKAFEAGALVEPTSVAYN  192 (384)
T ss_pred             EEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHH-eEEC-CccccccccCCCHHHhhhhhHHHHHHH
Confidence            985                              37899999999988 9999 98631     33357778889999999


Q ss_pred             Hhhhh-cCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCCh--hhHHHHHHHH
Q 019042          148 GLYEL-CSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKE--PDLDAALKRC  223 (347)
Q Consensus       148 ~l~~~-~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~  223 (347)
                      ++... .++++|++|+|+| .|++|++++|+|+..|+ +|+++++++++.+.++ ++|+++++++.+.  .++...+.++
T Consensus       193 al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~v~~~  270 (384)
T cd08265         193 GLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDCLSGEKVMEV  270 (384)
T ss_pred             HHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccccHHHHHHHh
Confidence            98665 6899999999996 59999999999999999 7999999998888888 8999888887631  1567778888


Q ss_pred             CCC-CccEEEECCCc--hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHH
Q 019042          224 FPE-GIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLE  300 (347)
Q Consensus       224 ~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  300 (347)
                      +++ ++|+++||.|.  ..+..++++++++|+++.+|.....      ..........++.++.+.....    ....++
T Consensus       271 ~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~----~~~~~~  340 (384)
T cd08265         271 TKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATT------VPLHLEVLQVRRAQIVGAQGHS----GHGIFP  340 (384)
T ss_pred             cCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC------CcccHHHHhhCceEEEEeeccC----CcchHH
Confidence            876 89999999986  3778999999999999999864321      1123344555566776664322    245688


Q ss_pred             HHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          301 LVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       301 ~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +++++++++.+++.  +.+.|+++++.+|++.+.++ ..||+++
T Consensus       341 ~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         341 SVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            89999999999864  56788999999999996554 5788886

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.6e-34  Score=255.44  Aligned_cols=310  Identities=22%  Similarity=0.312  Sum_probs=251.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.+.  +.+  +.+.+++  .+.|.+ .+ ++|+|++.++++|++|+....+........|.++|||+  .|+|+
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~   70 (326)
T cd08272           1 MKALVLESF--GGP--EVFELRE--VPRPQP-GP-GQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDV--AGVVE   70 (326)
T ss_pred             CeEEEEccC--CCc--hheEEee--cCCCCC-CC-CeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccce--eEEEE
Confidence            589999877  655  3455544  455544 67 99999999999999998877664332233478899994  45999


Q ss_pred             EecCCCCCCCCCCEEEec--------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           89 VLDSTHPNYKKDDLVWGL--------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~--------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                      .+|+++..+++||+|+++        |+|++|+.++.+. ++++ |++++.. .++.++..+.+||+++.+..++.+|++
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~  147 (326)
T cd08272          71 AVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARL-LALK-PANLSMR-EAAALPLVGITAWEGLVDRAAVQAGQT  147 (326)
T ss_pred             EeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHH-cccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhcCCCCCCE
Confidence            999999999999999985        6899999999888 9999 9985444 577888899999999878889999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchh
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKM  239 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~  239 (347)
                      ++|+|++|++|++++++++..|++|++++++ ++.+.++ ++|++.+++...  ++.+.+.+.+.+ ++|+++||+++..
T Consensus       148 vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~~~~~~~~  223 (326)
T cd08272         148 VLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVFDTVGGET  223 (326)
T ss_pred             EEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEEEECCChHH
Confidence            9999999999999999999999999999988 8889898 899988887654  366778877776 8999999999888


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc--c----ccchHHHHHHHHHHHHcCCccc
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD--F----YHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~----~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                      +..++++++++|+++.++....         ........+++++.+.....  .    +....+.+..+.+++.++.+.+
T Consensus       224 ~~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~  294 (326)
T cd08272         224 LDASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP  294 (326)
T ss_pred             HHHHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc
Confidence            8889999999999999976420         11122235677777765432  1    3344677888999999999887


Q ss_pred             ccc-eeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          314 VED-IAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       314 ~~~-~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .++ ..+++++++++++.+.++...+|+++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         295 LLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            655 8889999999999998888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.2e-34  Score=258.05  Aligned_cols=295  Identities=24%  Similarity=0.313  Sum_probs=233.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      ||++++.++  + +  +.+.++.  .+.|.+ ++ +||+||+.++++|++|+....+..  ...+|.++|||  ++|+|+
T Consensus         1 ~~~~~~~~~--~-~--~~~~~~~--~~~~~~-~~-~ev~v~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e--~~G~v~   67 (325)
T cd08264           1 MKALVFEKS--G-I--ENLKVED--VKDPKP-GP-GEVLIRVKMAGVNPVDYNVINAVK--VKPMPHIPGAE--FAGVVE   67 (325)
T ss_pred             CeeEEeccC--C-C--CceEEEe--ccCCCC-CC-CeEEEEEEEEEechHHHHHHhCCC--CCCCCeecccc--eeEEEE
Confidence            588988766  4 3  3455544  555544 77 999999999999999987765421  12347889999  556999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++.+++||+|+++                              |+|++|++++++. ++++ |++++.. +++.+
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~~  144 (325)
T cd08264          68 EVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKN-LFKI-PDSISDE-LAASL  144 (325)
T ss_pred             EECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHH-ceeC-CCCCCHH-Hhhhh
Confidence            999999999999999863                              7899999999988 9999 9996554 68889


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                      +..+.+||+++.. .++++|++|+|+|++|++|++++++|++.|++|+++++    .+.++ ++|++++++.++   ..+
T Consensus       145 ~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~~---~~~  215 (325)
T cd08264         145 PVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYDE---VEE  215 (325)
T ss_pred             hhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecchH---HHH
Confidence            9999999999865 89999999999999999999999999999999998873    36666 899988887643   345


Q ss_pred             HHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHH
Q 019042          219 ALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF  298 (347)
Q Consensus       219 ~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  298 (347)
                      .+++++ +++|+++|++|+..+..++++++++|+++.+|.....     ....+...+..++.++.+...+.     ++.
T Consensus       216 ~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~  284 (325)
T cd08264         216 KVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGG-----EVKLDLSDLYSKQISIIGSTGGT-----RKE  284 (325)
T ss_pred             HHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----CCccCHHHHhhcCcEEEEccCCC-----HHH
Confidence            566666 6799999999988899999999999999999864211     12334555566677777765443     567


Q ss_pred             HHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEE
Q 019042          299 LELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQL  341 (347)
Q Consensus       299 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkiv  341 (347)
                      ++++++++...  +..+...|+++++++|++.+.++...+|++
T Consensus       285 ~~~~~~l~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~kv~  325 (325)
T cd08264         285 LLELVKIAKDL--KVKVWKTFKLEEAKEALKELFSKERDGRIL  325 (325)
T ss_pred             HHHHHHHHHcC--CceeEEEEcHHHHHHHHHHHHcCCCccccC
Confidence            88888888644  345667899999999999999887777753

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=1.3e-33  Score=254.31  Aligned_cols=316  Identities=23%  Similarity=0.291  Sum_probs=256.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+.+...  +.+  ..+.+..  .+.| +.++ ++++||+.++++|+.|+....+.......+|.++|||++  |+|+
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~~--~~~~-~l~~-~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~--G~v~   70 (325)
T TIGR02824         1 MKAIEITEP--GGP--EVLVLVE--VPLP-VPKA-GEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVA--GEVV   70 (325)
T ss_pred             CceEEEccC--CCc--ccceEEe--CCCC-CCCC-CEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeE--EEEE
Confidence            478888765  444  3344443  4444 3467 999999999999999987776644333345789999954  5999


Q ss_pred             EecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           89 VLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      .+|+++.++++||+|+++   |+|++|+.++.+. ++++ |++++.. ++++++..+.+||.++.....+.++++++|+|
T Consensus        71 ~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g  147 (325)
T TIGR02824        71 AVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQ-VLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAGETVLIHG  147 (325)
T ss_pred             EeCCCCCCCCCCCEEEEccCCCcceeEEEecHHH-cEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence            999999999999999986   7899999999988 9999 9985443 57889999999999987888999999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVL  244 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~  244 (347)
                      ++|++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++...+....++ ++|++++|.|+..+..++
T Consensus       148 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~  225 (325)
T TIGR02824       148 GASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNI  225 (325)
T ss_pred             CcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCchHHHHHHH
Confidence            9999999999999999999999999999888887 8998888877665 777888877765 899999999988888999


Q ss_pred             HhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-----ccchHHHHHHHHHHHHcCCcccccceee
Q 019042          245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       245 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      ++++++|+++.++......    . ..+...++.+++++.+......     +....+.+.+++++++++.+.+..+..+
T Consensus       226 ~~l~~~g~~v~~g~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  300 (325)
T TIGR02824       226 KALALDGRIVQIGFQGGRK----A-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVF  300 (325)
T ss_pred             HhhccCcEEEEEecCCCCc----C-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEE
Confidence            9999999999998743221    1 2344445578999998875442     2223455677889999999887777889


Q ss_pred             ccccHHHHHHHhHcCCCcceEEEEe
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++++++++++.+.++...||+++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       301 PLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             eHHHHHHHHHHHHhCCCcceEEEeC
Confidence            9999999999999888889999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.1e-34  Score=254.33  Aligned_cols=295  Identities=18%  Similarity=0.134  Sum_probs=236.5

Q ss_pred             EEeecccCCCCCCCCCeEEEEEEEeecChhccccc-cCCCCC-CcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec
Q 019042           29 IITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRM-SKLDKP-SFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL  106 (347)
Q Consensus        29 ~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~-~~~~~~-~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~  106 (347)
                      ++..+++.|.+ .+ +||+||+.++++|+.|+... .+.... ...+|.++|+|  ++|+|+.+|++++++++||+|+++
T Consensus         7 ~~~~~~~~~~l-~~-~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e--~~G~V~~vG~~v~~~~~Gd~V~~~   82 (312)
T cd08269           7 FEVEEHPRPTP-GP-GQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHE--GWGRVVALGPGVRGLAVGDRVAGL   82 (312)
T ss_pred             eEEEECCCCCC-CC-CeEEEEEEEeeecccchHHHccCCCCcccCCCCccccee--eEEEEEEECCCCcCCCCCCEEEEe
Confidence            34444666655 77 99999999999999998776 553211 12237889998  666999999999999999999986


Q ss_pred             --cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE
Q 019042          107 --TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY  184 (347)
Q Consensus       107 --g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~  184 (347)
                        |+|++|++++++. ++++ |+++  . .++.+..++.+||+++. ..+++++++|+|+| +|++|++++|+|++.|++
T Consensus        83 ~~g~~~~~~~v~~~~-~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~  155 (312)
T cd08269          83 SGGAFAEYDLADADH-AVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGAR  155 (312)
T ss_pred             cCCcceeeEEEchhh-eEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCc
Confidence              7999999999998 9999 9984  2 23222377889999986 78999999999997 599999999999999998


Q ss_pred             -EEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEccccc
Q 019042          185 -VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       185 -V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                       |+++++++++.+.++ ++|++++++.+.. ++.+.+.+++++ ++|+++||+|+ .....++++++++|+++.+|....
T Consensus       156 ~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~  233 (312)
T cd08269         156 RVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD  233 (312)
T ss_pred             EEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC
Confidence             999999999988888 8999888887665 788888888776 89999999986 578899999999999999986531


Q ss_pred             ccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCC-cc
Q 019042          262 YNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQN-VG  338 (347)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~-~g  338 (347)
                      .     ....+......+++.+.++.... +....+.++++.++++++.+.+  .+...+++++++++++.+.+++. .+
T Consensus       234 ~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  307 (312)
T cd08269         234 G-----PRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFI  307 (312)
T ss_pred             C-----CcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCce
Confidence            1     11223345566777776664433 3344678999999999999986  35678899999999999998864 58


Q ss_pred             eEEE
Q 019042          339 KQLV  342 (347)
Q Consensus       339 kivi  342 (347)
                      |+++
T Consensus       308 ~~~~  311 (312)
T cd08269         308 KGVI  311 (312)
T ss_pred             EEEe
Confidence            9886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1e-33  Score=256.52  Aligned_cols=299  Identities=24%  Similarity=0.307  Sum_probs=238.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +     .+++.+  +|.|.+ ++ +||+||++++++|+.|+....+...  ..+|.++|+|  ++|+|+
T Consensus         1 ~~a~~~~~~--~-----~~~~~~--~~~~~l-~~-~~v~v~v~~~~l~~~d~~~~~g~~~--~~~p~~~g~~--~~G~v~   65 (334)
T cd08234           1 MKALVYEGP--G-----ELEVEE--VPVPEP-GP-DEVLIKVAACGICGTDLHIYEGEFG--AAPPLVPGHE--FAGVVV   65 (334)
T ss_pred             CeeEEecCC--C-----ceEEEe--ccCCCC-CC-CeEEEEEEEEeEchhhhHHhcCCCC--CCCCcccccc--eEEEEE
Confidence            589999766  3     245554  566654 77 9999999999999999988777542  2367899999  566999


Q ss_pred             EecCCCCCCCCCCEEEe------------------------------ccCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      .+|++++.+++||+|++                              .|+|++|++++.+. ++++ |++++.. +++.+
T Consensus        66 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~~  142 (334)
T cd08234          66 AVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQ-VYKI-PDNLSFE-EAALA  142 (334)
T ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHH-cEEC-cCCCCHH-HHhhh
Confidence            99999999999999987                              27899999999999 9999 9995554 45444


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                       ..+.+|++++ ...++.+|++|+|+| .|.+|++++++|++.|++ |+++++++++.+.++ ++|++.++++.+. ++.
T Consensus       143 -~~~~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~  217 (334)
T cd08234         143 -EPLSCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSRE-DPE  217 (334)
T ss_pred             -hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCCC-CHH
Confidence             7788999988 678999999999997 599999999999999997 889999999999997 8998888888765 554


Q ss_pred             HHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchH
Q 019042          218 AALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP  296 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  296 (347)
                      .. +...++++|++|||+|. ..+..++++++++|+++.+|.....    ..........+.+++++.+....      .
T Consensus       218 ~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~  286 (334)
T cd08234         218 AQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFIN------P  286 (334)
T ss_pred             HH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEeccC------H
Confidence            44 33333489999999985 6888999999999999999875321    11122334445577777776532      4


Q ss_pred             HHHHHHHHHHHcCCcccc--cceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          297 KFLELVMPAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       297 ~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +.++++.++++++.+.+.  +..++++++++++++.+.+ ...||+|+
T Consensus       287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         287 YTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            568889999999998743  5678899999999999998 77889986

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.1e-33  Score=256.93  Aligned_cols=303  Identities=21%  Similarity=0.237  Sum_probs=237.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCC--CCCcccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD--KPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~--~~~~~~p~v~G~e~~g~G~   86 (347)
                      |||++++++  +..    +.+  .+.|.|.| ++ +|++||+.++++|+.|...+.+..  .....+|.++|||++  |+
T Consensus         1 ~~~~~~~~~--~~~----~~~--~~~~~~~~-~~-~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~--G~   68 (341)
T cd05281           1 MKAIVKTKA--GPG----AEL--VEVPVPKP-GP-GEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFA--GE   68 (341)
T ss_pred             CcceEEecC--CCc----eEE--EeCCCCCC-CC-CeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceE--EE
Confidence            589999876  432    444  44677766 67 999999999999999987644321  112345778999954  59


Q ss_pred             EEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccc
Q 019042           87 SKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa  136 (347)
                      |+.+|++++.+++||+|+++                              |+|++|++++.+. ++++ |++++.  +++
T Consensus        69 V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~l-P~~~~~--~~a  144 (341)
T cd05281          69 VVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEEN-LWKN-DKDIPP--EIA  144 (341)
T ss_pred             EEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHH-cEEC-cCCCCH--HHh
Confidence            99999999999999999874                              7899999999988 9999 999443  556


Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      +++..+.++++++.  ....+|++|+|+| .|++|++++|+|++.|+ +|+++++++++.+.++ ++|+++++++... +
T Consensus       145 ~~~~~~~~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~  219 (341)
T cd05281         145 SIQEPLGNAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPREE-D  219 (341)
T ss_pred             hhhhHHHHHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCcccc-c
Confidence            77788888988874  4567899999987 59999999999999999 7999988888888888 8999888887765 7


Q ss_pred             HHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccccc
Q 019042          216 LDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYH  293 (347)
Q Consensus       216 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  293 (347)
                      +. .+.+.+++ ++|++|||+|+ .....++++|+++|+++.+|.....     ...........+++.+.+....    
T Consensus       220 ~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----  289 (341)
T cd05281         220 VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP-----VDIDLNNLVIFKGLTVQGITGR----  289 (341)
T ss_pred             HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-----cccccchhhhccceEEEEEecC----
Confidence            77 78887776 89999999987 5788999999999999999864321     0011112355567777665422    


Q ss_pred             chHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          294 QYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      ...+.++++.+++.++.+.  +.+...++++++++|++.+.++. .||+|++
T Consensus       290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence            2245678889999999886  34566789999999999999988 8999985

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=1e-33  Score=257.04  Aligned_cols=293  Identities=21%  Similarity=0.239  Sum_probs=232.3

Q ss_pred             eEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCC--CCCcccCCCCCCceeeceEEEEecCCCCCCCCCCEEE
Q 019042           27 MKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD--KPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVW  104 (347)
Q Consensus        27 ~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~--~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~  104 (347)
                      ++++  +.|.|.| ++ +||+||+.++++|+.|+..+.+..  .....+|.++|+|  ++|+|+++|++++++++||+|+
T Consensus        11 ~~l~--~~~~p~~-~~-~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e--~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692        11 AELT--EVPVPEP-GP-GEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHE--VAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             cEEE--ECCCCCC-CC-CeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccc--eEEEEEEECCCCCcCCCCCEEE
Confidence            4554  4677766 77 999999999999999987654421  1123457789999  5569999999999999999998


Q ss_pred             e------------------------------ccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcC
Q 019042          105 G------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCS  154 (347)
Q Consensus       105 ~------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~  154 (347)
                      +                              .|+|++|++++++. ++++ |++++.  +.++++..+.+|++++  ...
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~--~~a~~~~~~~~a~~~~--~~~  158 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQN-IWKN-PKSIPP--EYATIQEPLGNAVHTV--LAG  158 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHH-cEEC-cCCCCh--HhhhhcchHHHHHHHH--Hcc
Confidence            6                              27899999999998 9999 999544  4566788889999887  345


Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYF  232 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vi  232 (347)
                      ..+|++++|.| +|++|++++|+|+++|++ |+++.+++++.+.++ ++|++.++++... ++.+.+.+++++ ++|++|
T Consensus       159 ~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~l~~~~~~~~~d~vl  235 (340)
T TIGR00692       159 PISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFKE-DVVKEVADLTDGEGVDVFL  235 (340)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEccccc-CHHHHHHHhcCCCCCCEEE
Confidence            78899999977 599999999999999996 888888888888888 8999888888765 788888887765 899999


Q ss_pred             ECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCc
Q 019042          233 ENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL  311 (347)
Q Consensus       233 d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  311 (347)
                      ||.|+ ..+...+++++++|+++.+|..... .  .  ......++.+++++.+...    ..+.+.+.++.++++++.+
T Consensus       236 d~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~--~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l  306 (340)
T TIGR00692       236 EMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-V--T--IDFTNKVIFKGLTIYGITG----RHMFETWYTVSRLIQSGKL  306 (340)
T ss_pred             ECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-c--c--cchhhhhhhcceEEEEEec----CCchhhHHHHHHHHHcCCC
Confidence            99886 6788999999999999999875321 1  1  1112234556677665542    2234567889999999998


Q ss_pred             c--cccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          312 V--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       312 ~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +  +.+...++++++.++++.+.+++. ||+|++|
T Consensus       307 ~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       307 DLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             ChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            7  446788899999999999988874 9999875

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.5e-33  Score=256.19  Aligned_cols=290  Identities=18%  Similarity=0.169  Sum_probs=230.4

Q ss_pred             eEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC--CCcccCCCCCCceeeceEEEEecCCCCCCCCCCEEE
Q 019042           27 MKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK--PSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVW  104 (347)
Q Consensus        27 ~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~--~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~  104 (347)
                      ++++  ++|.|.+ .+ +||+||+.++++|+.|.+...+...  ....+|.++|+|  ++|+|+.+|++++++++||+|+
T Consensus        10 ~~~~--~~~~~~l-~~-~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e--~~G~V~~vG~~v~~~~~Gd~V~   83 (343)
T cd05285          10 LRLE--ERPIPEP-GP-GEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHE--SAGTVVAVGSGVTHLKVGDRVA   83 (343)
T ss_pred             eeEE--ECCCCCC-CC-CeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcc--eeEEEEeeCCCCCCCCCCCEEE
Confidence            4555  4666655 67 9999999999999999876532111  112357789999  5569999999999999999998


Q ss_pred             e-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhc
Q 019042          105 G-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELC  153 (347)
Q Consensus       105 ~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~  153 (347)
                      +                               .|+|++|++++++. ++++ |++++.. +++.+ ..+.+||+++ ..+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~~-~~~~~a~~~~-~~~  158 (343)
T cd05285          84 IEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADF-CHKL-PDNVSLE-EGALV-EPLSVGVHAC-RRA  158 (343)
T ss_pred             EccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHH-cEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-Hhc
Confidence            5                               37899999999988 9999 9995544 45544 5778999987 678


Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhH---HHHHHHHCCC-Cc
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL---DAALKRCFPE-GI  228 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~---~~~i~~~~~~-~~  228 (347)
                      .+++|++|+|+| +|++|++++|+|++.|++ |+++++++++.+.++ ++|+++++++++. ++   .+.+.+.+++ ++
T Consensus       159 ~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~  235 (343)
T cd05285         159 GVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRTE-DTPESAEKIAELLGGKGP  235 (343)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEeccccc-cchhHHHHHHHHhCCCCC
Confidence            999999999987 599999999999999997 999998999989998 8999999988765 53   6777777766 79


Q ss_pred             cEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHH
Q 019042          229 DIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIK  307 (347)
Q Consensus       229 d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  307 (347)
                      |++|||.|+. .+..++++++++|+++.+|.....      ...+......+++++.++...      .+.+++++++++
T Consensus       236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~  303 (343)
T cd05285         236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIRGVFRY------ANTYPTAIELLA  303 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEEEeccC------hHHHHHHHHHHH
Confidence            9999999985 889999999999999999864321      122333455566776665332      266888999999


Q ss_pred             cCCcc--cccceeeccccHHHHHHHhHcCC-CcceEEE
Q 019042          308 EGKLV--YVEDIAEGLEKAPSALVGIFTGQ-NVGKQLV  342 (347)
Q Consensus       308 ~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkivi  342 (347)
                      ++.+.  +.+.++++++++.+|++.+.+++ ..+|++|
T Consensus       304 ~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         304 SGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             cCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            99875  44667889999999999998875 5589998

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.4e-33  Score=255.82  Aligned_cols=291  Identities=18%  Similarity=0.180  Sum_probs=226.4

Q ss_pred             eEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCceeeceEEEEecCCCCCCCCCCEEE
Q 019042           27 MKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVW  104 (347)
Q Consensus        27 ~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~  104 (347)
                      ++++  +++.|.| ++ +||+||+.++++|++|.....+....  ...+|.++|||  ++|+|+++|++++.+++||+|+
T Consensus        29 l~~~--~~~~p~~-~~-~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e--~~G~V~~vG~~v~~~~~Gd~V~  102 (364)
T PLN02702         29 LKIQ--PFKLPPL-GP-HDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE--CAGIIEEVGSEVKHLVVGDRVA  102 (364)
T ss_pred             eEEE--eccCCCC-CC-CeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccc--eeEEEEEECCCCCCCCCCCEEE
Confidence            4554  4566655 77 99999999999999998877652211  12357889999  5569999999999999999998


Q ss_pred             e-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhc
Q 019042          105 G-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELC  153 (347)
Q Consensus       105 ~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~  153 (347)
                      +                               .|+|++|++++.+. ++++ |++++.  +.+++..++.++|+++ ...
T Consensus       103 ~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~-~~~~-P~~l~~--~~aa~~~~~~~a~~~~-~~~  177 (364)
T PLN02702        103 LEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKL-PENVSL--EEGAMCEPLSVGVHAC-RRA  177 (364)
T ss_pred             EcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHH-eEEC-CCCCCH--HHHhhhhHHHHHHHHH-Hhc
Confidence            6                               37899999999988 9999 999443  3333334555688887 667


Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecC--ChhhHHHHHHHH---CCCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYK--KEPDLDAALKRC---FPEG  227 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~--~~~~~~~~i~~~---~~~~  227 (347)
                      ++.+|++|+|+| .|++|++++|+|++.|++ |+++++++++.+.++ ++|+++++++.  +. ++.+.+.++   ++++
T Consensus       178 ~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  254 (364)
T PLN02702        178 NIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIE-DVESEVEEIQKAMGGG  254 (364)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccc-cHHHHHHHHhhhcCCC
Confidence            899999999997 599999999999999995 777878888888888 89998877653  23 666666554   2347


Q ss_pred             ccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHH
Q 019042          228 IDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAI  306 (347)
Q Consensus       228 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  306 (347)
                      +|++|||+|+ ..+..++++++++|+++.+|.....      ..........+++++.++...      ...++.+++++
T Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~  322 (364)
T PLN02702        255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE------MTVPLTPAAAREVDVVGVFRY------RNTWPLCLEFL  322 (364)
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------CcccHHHHHhCccEEEEeccC------hHHHHHHHHHH
Confidence            9999999995 7889999999999999999864221      122444566778888876532      35678899999


Q ss_pred             HcCCcc--cccceeecc--ccHHHHHHHhHcCCCcceEEEE
Q 019042          307 KEGKLV--YVEDIAEGL--EKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       307 ~~g~~~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      +++.+.  +.+.+.|++  +++++|++.+.+++..+|+++.
T Consensus       323 ~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        323 RSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            999885  446677555  8999999999988888999985

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=1.2e-33  Score=252.11  Aligned_cols=288  Identities=18%  Similarity=0.222  Sum_probs=237.2

Q ss_pred             CCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec-----cCcceeEee
Q 019042           41 GSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-----TSWEEYSLI  115 (347)
Q Consensus        41 ~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~-----g~~~~~~~~  115 (347)
                      .+ ++|+||+.++++|+.|+....+.+.....+|.++|+|  +.|+|+++|++++++++||+|+++     |+|++|+.+
T Consensus         6 ~~-~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e--~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~   82 (303)
T cd08251           6 GP-GEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFE--ASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTV   82 (303)
T ss_pred             CC-CEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCce--eeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEc
Confidence            66 9999999999999999888777543334568899999  556999999999999999999986     789999999


Q ss_pred             cCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Q 019042          116 QSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV  195 (347)
Q Consensus       116 ~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~  195 (347)
                      +++. ++++ |++++.. ++++++..+.+||+++. ...+++|++++|++++|++|++++|++++.|++|+++++++++.
T Consensus        83 ~~~~-~~~~-p~~~~~~-~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  158 (303)
T cd08251          83 PEDQ-VVRK-PASLSFE-EACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKL  158 (303)
T ss_pred             cHHH-eEEC-CCCCCHH-HHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            9988 9999 9995444 58889999999999984 68999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchH
Q 019042          196 NLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLM  274 (347)
Q Consensus       196 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  274 (347)
                      +.++ ++|++.+++.... ++.+.+..++++ ++|+++|++++..+..++++++++|+++.++......    ...... 
T Consensus       159 ~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~-  231 (303)
T cd08251         159 EYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVDL-  231 (303)
T ss_pred             HHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccCh-
Confidence            9998 8999989988776 788888888876 8999999998888899999999999999987643210    011122 


Q ss_pred             HHHhccceeeeeEeccc----ccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          275 QVVGKRIRMEGFLAGDF----YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       275 ~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      ..+.+++.+.......+    +....+.+.++.++++++.+++.....+++++++++++.+.++...||+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         232 SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            22334444443332221    334456788899999999998877888999999999999998888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.6e-33  Score=252.40  Aligned_cols=297  Identities=19%  Similarity=0.136  Sum_probs=236.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.+.  +.|++..+.+++  .+.|.+ ++ +||+||+.++++|++|.....|.... ...|.++|||  ++|+|+
T Consensus         1 ~~~~~~~~~--~~~~~~~~~~~~--~~~~~~-~~-~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e--~~G~V~   71 (329)
T cd08298           1 MKAMVLEKP--GPIEENPLRLTE--VPVPEP-GP-GEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHE--IVGRVE   71 (329)
T ss_pred             CeEEEEecC--CCCCCCCceEEe--ccCCCC-CC-CEEEEEEEEEeccHHHHHHHhCCCCC-CCCCcccccc--ccEEEE
Confidence            589999888  655434466655  444544 77 99999999999999998877764422 3457899999  556999


Q ss_pred             EecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      .+|++++++++||+|++                               .|+|++|++++.+. ++++ |++++.. ++++
T Consensus        72 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~~~  148 (329)
T cd08298          72 AVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERF-AYPI-PEDYDDE-EAAP  148 (329)
T ss_pred             EECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchh-EEEC-CCCCCHH-HhhH
Confidence            99999999999999975                               37899999999998 9999 9995554 6889


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +++.+.+||+++ ..++++++++++|+| +|++|+++++++++.|++|+++++++++.+.++ ++|++++++.+.  .  
T Consensus       149 ~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~--  221 (329)
T cd08298         149 LLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDD--L--  221 (329)
T ss_pred             hhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCc--c--
Confidence            999999999999 778999999999997 699999999999999999999999999999997 899987777643  1  


Q ss_pred             HHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchH
Q 019042          218 AALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP  296 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  296 (347)
                            .++++|+++++.+. ..+..++++++++|+++.+|....     .....+... +.++..+.+.....     .
T Consensus       222 ------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~~~-----~  284 (329)
T cd08298         222 ------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVANLT-----R  284 (329)
T ss_pred             ------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecCCC-----H
Confidence                  12369999998654 688999999999999998874221     111112222 33455555543322     5


Q ss_pred             HHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          297 KFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       297 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +.++++.++++++.+++. .++|+++++++|++.+.+++..||+++
T Consensus       285 ~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         285 QDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            678889999999998874 578899999999999999998999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=5.7e-33  Score=249.91  Aligned_cols=315  Identities=23%  Similarity=0.299  Sum_probs=255.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.+.  +.+  ..+.+  .+.+ |.+..+ ++++||+.++++|+.|+....+.......+|+++|||++  |.|+
T Consensus         1 ~~~~~~~~~--~~~--~~~~~--~~~~-~~~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~--G~v~   70 (323)
T cd08241           1 MKAVVCKEL--GGP--EDLVL--EEVP-PEPGAP-GEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVA--GVVE   70 (323)
T ss_pred             CeEEEEecC--CCc--ceeEE--ecCC-CCCCCC-CeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeE--EEEE
Confidence            578898766  554  33444  3445 545446 899999999999999988776654333445778999954  5999


Q ss_pred             EecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           89 VLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      .+|++++.+++||+|+++   |++++|+.++.+. ++++ |++++.. ++++++..+.+||.++.....+.++++++|+|
T Consensus        71 ~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g  147 (323)
T cd08241          71 AVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAA-VFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPGETVLVLG  147 (323)
T ss_pred             EeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHH-ceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence            999999999999999996   6899999999988 9999 9985444 57778999999999987778999999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVL  244 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~  244 (347)
                      ++|++|++++++++..|++|+++++++++.+.++ ++|+..+++.... ++.+.+...+.+ ++|.++||.|+.....++
T Consensus       148 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~  225 (323)
T cd08241         148 AAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFEASL  225 (323)
T ss_pred             CCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccHHHHHHHH
Confidence            9899999999999999999999999999999998 8998888887765 788888888776 899999999988888999


Q ss_pred             HhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc----ccchHHHHHHHHHHHHcCCcccccceeec
Q 019042          245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF----YHQYPKFLELVMPAIKEGKLVYVEDIAEG  320 (347)
Q Consensus       245 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  320 (347)
                      ++++++|+++.++.....     ....+....+.+++++.+.....+    +....+.++++.+++.++.+.+..+..|+
T Consensus       226 ~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (323)
T cd08241         226 RSLAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFP  300 (323)
T ss_pred             HhhccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEc
Confidence            999999999999864321     111223345568888888765544    22334678889999999999877778899


Q ss_pred             cccHHHHHHHhHcCCCcceEEEE
Q 019042          321 LEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       321 ~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      ++++.++++.+.++...+|++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         301 LEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHHHHHHHhCCCCCcEEeC
Confidence            99999999999888888898863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-32  Score=248.42  Aligned_cols=310  Identities=21%  Similarity=0.293  Sum_probs=246.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +. . .++.+  .++|.|.+ .+ ++|+||+.++++|+.|+....+... ...+|.++|||++  |+|+
T Consensus         1 ~~a~~~~~~--~~-~-~~~~~--~~~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~--G~v~   69 (325)
T cd08271           1 MKAWVLPKP--GA-A-LQLTL--EEIEIPGP-GA-GEVLVKVHAAGLNPVDWKVIAWGPP-AWSYPHVPGVDGA--GVVV   69 (325)
T ss_pred             CeeEEEccC--CC-c-ceeEE--eccCCCCC-CC-CEEEEEEEEEecCHHHHHHhcCCCC-CCCCCcccccceE--EEEE
Confidence            589999887  32 1 13444  44666655 77 9999999999999999887766442 2234788999954  5999


Q ss_pred             EecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEE
Q 019042           89 VLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVY  162 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vl  162 (347)
                      .+|++++.+++||+|+++      |+|++|+.++.+. ++++ |++++.. +++++++.+.+||+++.....+.+|++++
T Consensus        70 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~-~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~~~g~~vl  146 (325)
T cd08271          70 AVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARA-VLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRIEAGRTIL  146 (325)
T ss_pred             EeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHH-eEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCCCCCCEEE
Confidence            999999999999999986      6899999999988 9999 9995554 57889999999999998888999999999


Q ss_pred             EEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHH
Q 019042          163 VSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLD  241 (347)
Q Consensus       163 I~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~  241 (347)
                      |+|++|++|++++++++..|++|+++. ++++.+.++ .+|++.+++.... ++.+.+.+.+.+ ++|++++|+++....
T Consensus       147 I~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~  223 (325)
T cd08271         147 ITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAA  223 (325)
T ss_pred             EECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEECCCcHhHH
Confidence            999989999999999999999999887 667778887 8999888887765 677788887765 899999999987777


Q ss_pred             HHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc----c----cchHHHHHHHHHHHHcCCccc
Q 019042          242 AVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF----Y----HQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~----~~~~~~~~~~~~~~~~g~~~~  313 (347)
                      ..+++++++|+++.++.....    .    . ...+.+++.+........    +    ....+.+.++++++.++.+.+
T Consensus       224 ~~~~~l~~~G~~v~~~~~~~~----~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  294 (325)
T cd08271         224 ALAPTLAFNGHLVCIQGRPDA----S----P-DPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEP  294 (325)
T ss_pred             HHHHhhccCCEEEEEcCCCCC----c----c-hhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeee
Confidence            889999999999998754211    0    1 112233333333222111    1    244567788999999999987


Q ss_pred             ccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          314 VEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       314 ~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .....++++++.++++.+.++...+|+++++
T Consensus       295 ~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         295 LVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             ccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            7677889999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=5.6e-33  Score=252.17  Aligned_cols=289  Identities=17%  Similarity=0.186  Sum_probs=226.3

Q ss_pred             CeEEEeecccCCCCCCCCCeEEEEEEEeecChhcccccc-CCCC-CCcccCCCCCCceeeceEEEEecCCCCCCCCCCEE
Q 019042           26 DMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMS-KLDK-PSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLV  103 (347)
Q Consensus        26 ~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~-~~~~-~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V  103 (347)
                      .+++++  .|.|.+ ++ +||+||+.++++|++|..... +... ....+|.++|+|  ++|+|+.+|++++++++||+|
T Consensus         8 ~~~~~~--~~~p~l-~~-~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e--~~G~v~~vG~~v~~~~~Gd~V   81 (339)
T cd08232           8 DLRVEE--RPAPEP-GP-GEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHE--VSGVVEAVGPGVTGLAPGQRV   81 (339)
T ss_pred             ceEEEE--cCCCCC-CC-CEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCcc--ceEEEEeeCCCCCcCCCCCEE
Confidence            455665  555654 77 999999999999999987653 2211 112457889999  556999999999999999999


Q ss_pred             Ee-----------------------------------ccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHH
Q 019042          104 WG-----------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGG  148 (347)
Q Consensus       104 ~~-----------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~  148 (347)
                      ++                                   .|+|++|++++++. ++++ |++++.. ++ +++.++.+||++
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~i-P~~~~~~-~a-a~~~~~~~a~~~  157 (339)
T cd08232          82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQ-CVPL-PDGLSLR-RA-ALAEPLAVALHA  157 (339)
T ss_pred             EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHH-eEEC-cCCCCHH-Hh-hhcchHHHHHHH
Confidence            86                                   27899999999998 9999 9995443 34 446788899999


Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC-C-
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF-P-  225 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~-~-  225 (347)
                      +...... ++++|+|.| +|++|++++|+|+++|+ +|+++++++++.+.++ ++|+++++++++. ++    .+.. . 
T Consensus       158 l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~~-~~----~~~~~~~  229 (339)
T cd08232         158 VNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLARD-PL----AAYAADK  229 (339)
T ss_pred             HHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCch-hh----hhhhccC
Confidence            8766556 899999987 59999999999999999 8999998888888887 8999889988764 32    2222 2 


Q ss_pred             CCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHH
Q 019042          226 EGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP  304 (347)
Q Consensus       226 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  304 (347)
                      +++|++|||.|+ ..+..++++|+++|+++.++....     . ...+....+.+++++.+....      .+.++++++
T Consensus       230 ~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  297 (339)
T cd08232         230 GDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG-----P-VPLPLNALVAKELDLRGSFRF------DDEFAEAVR  297 (339)
T ss_pred             CCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-ccCcHHHHhhcceEEEEEecC------HHHHHHHHH
Confidence            269999999986 678899999999999999986431     0 112333345677777766422      457888999


Q ss_pred             HHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          305 AIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       305 ~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +++++.+++  .+.+++++++++++++.+.++...||+|+++
T Consensus       298 ~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         298 LLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            999998864  3677899999999999999888899999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.4e-33  Score=250.15  Aligned_cols=284  Identities=19%  Similarity=0.180  Sum_probs=223.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +     .+++++  +|.|.+ ++ +||+||+.++++|+.|.....+..    ..|.++|||+  +|+|+
T Consensus         1 ~~a~~~~~~--~-----~~~~~~--~~~p~~-~~-~~vlV~v~a~~i~~~d~~~~~g~~----~~~~~~G~e~--~G~Vv   63 (319)
T cd08242           1 MKALVLDGG--L-----DLRVED--LPKPEP-PP-GEALVRVLLAGICNTDLEIYKGYY----PFPGVPGHEF--VGIVE   63 (319)
T ss_pred             CeeEEEeCC--C-----cEEEEE--CCCCCC-CC-CeEEEEEEEEEEccccHHHHcCCC----CCCCccCceE--EEEEE
Confidence            589999765  2     245555  566655 67 999999999999999998877643    2578999994  45999


Q ss_pred             EecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      ++|++   +++||+|..                               .|+|++|++++.+. ++++ |++++.. +++.
T Consensus        64 ~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~  137 (319)
T cd08242          64 EGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLEN-LHVV-PDLVPDE-QAVF  137 (319)
T ss_pred             EeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHH-eEEC-cCCCCHH-Hhhh
Confidence            99987   679999962                               26899999999988 9999 9995443 3443


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      + ....++|.++ ...++.++++|+|+| +|++|++++|+|+.+|++|++++.++++.+.++ ++|++.+++++.  .  
T Consensus       138 ~-~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~--~--  209 (319)
T cd08242         138 A-EPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEA--E--  209 (319)
T ss_pred             h-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCccc--c--
Confidence            2 4555666655 667899999999997 699999999999999999999999999999999 799988776643  1  


Q ss_pred             HHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchH
Q 019042          218 AALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP  296 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  296 (347)
                           ..++++|++|||+|+ ..+..++++++++|+++..+....      ....+...++.++.++.+.....      
T Consensus       210 -----~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~------  272 (319)
T cd08242         210 -----SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRCGP------  272 (319)
T ss_pred             -----ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEeccc------
Confidence                 122379999999987 578899999999999998665321      12234555667788887765432      


Q ss_pred             HHHHHHHHHHHcCCc--ccccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          297 KFLELVMPAIKEGKL--VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       297 ~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                        +++++++++++++  .+.+.++|+++++++|++.+.++. .+|+|++
T Consensus       273 --~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         273 --FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             --HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence              6788899999999  456778999999999999998665 5799885

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=7.4e-33  Score=250.48  Aligned_cols=298  Identities=22%  Similarity=0.240  Sum_probs=239.5

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      ||++++++  |..    +++.+  +|.|.+ .+ +||+||+.++++|+.|.....+... ...+|.++|||  ++|+|+.
T Consensus         1 ~~~~~~~~--~~~----~~~~~--~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~p~~~g~e--~~G~v~~   67 (330)
T cd08245           1 KAAVVHAA--GGP----LEPEE--VPVPEP-GP-GEVLIKIEACGVCHTDLHAAEGDWG-GSKYPLVPGHE--IVGEVVE   67 (330)
T ss_pred             CeEEEecC--CCC----ceEEe--ccCCCC-CC-CeEEEEEEEEeccHHHHHHHcCCCC-CCCCCcccCcc--ceEEEEE
Confidence            68888776  432    45554  566654 67 9999999999999999888776542 23457889999  5569999


Q ss_pred             ecCCCCCCCCCCEEE----------------------------e---ccCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           90 LDSTHPNYKKDDLVW----------------------------G---LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        90 vG~~v~~~~vGd~V~----------------------------~---~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      +|++++++++||+|+                            +   .|+|++|+.++.+. ++++ |++++.. +++.+
T Consensus        68 ~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~l  144 (330)
T cd08245          68 VGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEY-TVLL-PDGLPLA-QAAPL  144 (330)
T ss_pred             ECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHH-eEEC-CCCCCHH-Hhhhh
Confidence            999999999999997                            3   36899999999988 9999 9995554 67889


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                      +..+.+||+++.. .++.++++|+|+|+ |++|++++++|++.|++|+++++++++.+.++ ++|++.+++.... +...
T Consensus       145 ~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~  220 (330)
T cd08245         145 LCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAE-LDEQ  220 (330)
T ss_pred             hhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCc-chHH
Confidence            9999999999865 78999999999974 88999999999999999999999999999997 8998888876653 3322


Q ss_pred             HHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHH
Q 019042          219 ALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK  297 (347)
Q Consensus       219 ~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  297 (347)
                      .    ..+++|+++||.+. .....++++++++|+++.++.....     ....+...++.++.++.++....     ..
T Consensus       221 ~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~  286 (330)
T cd08245         221 A----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHGG-----RA  286 (330)
T ss_pred             h----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccCC-----HH
Confidence            2    22469999999875 6888999999999999999864321     11122444666777777776543     56


Q ss_pred             HHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          298 FLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       298 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      .++++++++.++.+.+ ....+++++++++++.+.++...||+|+
T Consensus       287 ~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         287 DLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            7888999999999876 4467899999999999999988899875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-32  Score=246.24  Aligned_cols=271  Identities=21%  Similarity=0.266  Sum_probs=219.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++++.   .+  ..+++++  +|.|.+ .+ +||+||+.++++|+.|.....+.+. ....|.++|+|+  +|+|+
T Consensus         1 ~~~~~~~~~---~~--~~~~~~~--~~~p~~-~~-~~v~V~v~~~~l~~~d~~~~~g~~~-~~~~p~~~G~e~--~G~V~   68 (306)
T cd08258           1 MKALVKTGP---GP--GNVELRE--VPEPEP-GP-GEVLIKVAAAGICGSDLHIYKGDYD-PVETPVVLGHEF--SGTIV   68 (306)
T ss_pred             CeeEEEecC---CC--CceEEee--cCCCCC-CC-CeEEEEEEEEEechhhHHHHcCCCC-cCCCCeeeccce--EEEEE
Confidence            478888664   22  3355554  666655 77 9999999999999999877776542 234578899994  45999


Q ss_pred             EecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      .+|++++.+++||+|+++                               |+|++|++++... ++++ |++++.  +.++
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~--~~aa  144 (306)
T cd08258          69 EVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEES-LHEL-PENLSL--EAAA  144 (306)
T ss_pred             EECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHH-eEEC-cCCCCH--HHHH
Confidence            999999999999999874                               6899999999998 9999 999544  3344


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA--GSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~--~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      ++..+.+||+++.....+.++++|+|.| +|++|++++|+|++.|++|++++  +++++.+.++ ++|++++ ++... +
T Consensus       145 ~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~-~  220 (306)
T cd08258         145 LTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGEE-D  220 (306)
T ss_pred             hhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCcC-C
Confidence            8888899999998888999999999976 69999999999999999988763  3455777778 8999887 87766 8


Q ss_pred             HHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccccc
Q 019042          216 LDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYH  293 (347)
Q Consensus       216 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  293 (347)
                      +.+.+...+++ ++|++|||+|+ ..+..++++++++|+++.+|.....     ...++...++.+++++.|+.++.   
T Consensus       221 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~---  292 (306)
T cd08258         221 LAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPL-----AASIDVERIIQKELSVIGSRSST---  292 (306)
T ss_pred             HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-----CcccCHHHHhhcCcEEEEEecCc---
Confidence            88888887765 89999999975 6888999999999999999986521     12345566777999999998876   


Q ss_pred             chHHHHHHHHHHHHcC
Q 019042          294 QYPKFLELVMPAIKEG  309 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~g  309 (347)
                        .++++++++++++|
T Consensus       293 --~~~~~~~~~~~~~~  306 (306)
T cd08258         293 --PASWETALRLLASG  306 (306)
T ss_pred             --hHhHHHHHHHHhcC
Confidence              67799999998875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.5e-32  Score=244.78  Aligned_cols=319  Identities=24%  Similarity=0.325  Sum_probs=247.9

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      ||+++...  +.+  ..+.+.+  .+.|.+ .+ ++|+||+.++++|+.|+....+........|.++|||  +.|+|+.
T Consensus         1 ~~~~~~~~--~~~--~~~~~~~--~~~~~~-~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e--~~G~v~~   70 (337)
T cd08275           1 RAVVLTGF--GGL--DKLKVEK--EALPEP-SS-GEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFE--CAGTVEA   70 (337)
T ss_pred             CeEEEcCC--CCc--cceEEEe--cCCCCC-CC-CEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcce--eEEEEEE
Confidence            46666554  443  3455544  455544 67 9999999999999999887776543333457889999  4469999


Q ss_pred             ecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcC
Q 019042           90 LDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAA  166 (347)
Q Consensus        90 vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga  166 (347)
                      +|+++.++++||+|+++   |+|++|+.++.+. ++++ |++++.. +++.++..+.+||+++.....+.+|++|+|+|+
T Consensus        71 ~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~  147 (337)
T cd08275          71 VGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQ-VFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPGQSVLVHSA  147 (337)
T ss_pred             ECCCCcCCCCCCEEEEecCCCeeeeEEEecHHH-eEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcC
Confidence            99999999999999997   7899999999988 9999 9985444 577888999999999988889999999999999


Q ss_pred             CChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHHHHHH
Q 019042          167 SGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL  245 (347)
Q Consensus       167 ~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~  245 (347)
                      +|++|++++++|+.. +..++... .+++.+.++ .+|++.+++.... ++...++..+++++|+++||.|+.....+++
T Consensus       148 ~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~  224 (337)
T cd08275         148 AGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYD  224 (337)
T ss_pred             cchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcHHHHHHHHH
Confidence            999999999999998 44444333 455778887 8999888888765 7888888777568999999999888889999


Q ss_pred             hhccCCEEEEEcccccccCC-CC----------ccccchHHHHhccceeeeeEeccc---ccchHHHHHHHHHHHHcCCc
Q 019042          246 NMRIHGRIAVCGMISQYNLE-KP----------EGVHNLMQVVGKRIRMEGFLAGDF---YHQYPKFLELVMPAIKEGKL  311 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~~  311 (347)
                      +++++|+++.+|.....+.. ..          .........+.+++++.++.....   .......+.++.+++.++.+
T Consensus       225 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (337)
T cd08275         225 LLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKI  304 (337)
T ss_pred             hhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCC
Confidence            99999999999865421100 00          001112345677888888765432   11223567889999999999


Q ss_pred             ccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          312 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       312 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .+.....|++++++++++.+.++...||+++++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         305 KPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             CCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            887778899999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=4.6e-32  Score=242.56  Aligned_cols=300  Identities=25%  Similarity=0.361  Sum_probs=240.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC--CCcccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK--PSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~--~~~~~p~v~G~e~~g~G~   86 (347)
                      |||+++..+  +.++    .+...+.+.|.+ ++ ++|+||+.++++|+.|+....+...  .....|.++|||  +.|+
T Consensus         1 ~~~~~~~~~--~~~~----~~~~~~~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e--~~G~   70 (309)
T cd05289           1 MKAVRIHEY--GGPE----VLELADVPTPEP-GP-GEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHD--VAGV   70 (309)
T ss_pred             CceEEEccc--CCcc----ceeecccCCCCC-CC-CeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccc--eeEE
Confidence            578898776  5552    233444555544 77 9999999999999999887766432  123447899999  5569


Q ss_pred             EEEecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           87 SKVLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                      |+.+|++++++++||+|+++      |+|++|+.++... ++++ |++++.. .++.++..+.+||.++.....+.++++
T Consensus        71 v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~  147 (309)
T cd05289          71 VVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADE-LALK-PANLSFE-EAAALPLAGLTAWQALFELGGLKAGQT  147 (309)
T ss_pred             EEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHH-hccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCCCCCCE
Confidence            99999999999999999985      6899999999988 9999 9985554 577888899999999987777999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchh
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKM  239 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~  239 (347)
                      ++|+|++|++|++++++++..|++|+++++++ +.+.++ .+|++.+++.... ++.+    .+.+ ++|+++||+++..
T Consensus       148 vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~~~~~~  220 (309)
T cd05289         148 VLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER----AAAPGGVDAVLDTVGGET  220 (309)
T ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh----ccCCCCceEEEECCchHH
Confidence            99999889999999999999999999999877 778887 8998888877654 4443    2333 7999999999988


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceee
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      ...++++++++|+++.+|.....       . .  ..+.+++++.......  .  .+.++++.++++++.+.+.+++.|
T Consensus       221 ~~~~~~~l~~~g~~v~~g~~~~~-------~-~--~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~  286 (309)
T cd05289         221 LARSLALVKPGGRLVSIAGPPPA-------E-Q--AAKRRGVRAGFVFVEP--D--GEQLAELAELVEAGKLRPVVDRVF  286 (309)
T ss_pred             HHHHHHHHhcCcEEEEEcCCCcc-------h-h--hhhhccceEEEEEecc--c--HHHHHHHHHHHHCCCEEEeeccEE
Confidence            89999999999999999864321       0 1  3334566665554422  1  578899999999999887778889


Q ss_pred             ccccHHHHHHHhHcCCCcceEEE
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      ++++++++++.+.++...+|+++
T Consensus       287 ~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         287 PLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             cHHHHHHHHHHHHhCCCCCcEeC
Confidence            99999999999998887888874

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=4.1e-32  Score=240.60  Aligned_cols=284  Identities=21%  Similarity=0.240  Sum_probs=235.2

Q ss_pred             CeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec--cCcceeEeecCCCcc
Q 019042           44 DTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEYSLIQSPQHL  121 (347)
Q Consensus        44 ~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~--g~~~~~~~~~~~~~~  121 (347)
                      +||+||+.++++|++|+....+..   ..+|.++|||  +.|+|+++|+++..+++||+|+++  |+|++|+.++.+. +
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~---~~~~~~~g~e--~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~   74 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL---PGDETPLGLE--CSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARL-V   74 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC---CCCCCcccee--eeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhh-e
Confidence            479999999999999998877643   2357899999  556999999999999999999997  7999999999998 9


Q ss_pred             eeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Q 019042          122 IKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK  201 (347)
Q Consensus       122 ~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~  201 (347)
                      +++ |++++.. +++.+++.+.+||.++.....+++|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ .
T Consensus        75 ~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~  151 (293)
T cd05195          75 VKI-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-E  151 (293)
T ss_pred             EeC-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H
Confidence            999 9985544 577888999999999988789999999999998999999999999999999999999999989998 7


Q ss_pred             hC--CCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHh
Q 019042          202 FG--FDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVG  278 (347)
Q Consensus       202 ~g--~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      ++  ++.++++... ++.+.+.+.+.+ ++|+++|+.|+..+..++++++++|+++.++.....+.    .. .....+.
T Consensus       152 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~-~~~~~~~  225 (293)
T cd05195         152 LGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSN----SK-LGMRPFL  225 (293)
T ss_pred             hCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccC----Cc-cchhhhc
Confidence            77  6778887765 788888888766 89999999999889999999999999999987542210    01 1122344


Q ss_pred             ccceeeeeEeccc----ccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          279 KRIRMEGFLAGDF----YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       279 ~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +++++.......+    +....+.+.++.++++++.+.+..+..++++++.++++.+.++...||+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         226 RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            5666665544332    233456788999999999998888888999999999999998888888874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-31  Score=241.58  Aligned_cols=292  Identities=27%  Similarity=0.302  Sum_probs=224.7

Q ss_pred             EeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec-
Q 019042           30 ITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-  106 (347)
Q Consensus        30 ~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~-  106 (347)
                      +..+.|.|.+ ++ +||+|++.++++|+.|+....+....  ...+|.++|||  ++|+|+++|++++++++||+|+++ 
T Consensus        15 ~~~~~~~~~~-~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e--~~G~v~~~G~~v~~~~~Gd~V~~~~   90 (319)
T cd08267          15 LEVEVPIPTP-KP-GEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMD--FAGEVVAVGSGVTRFKVGDEVFGRL   90 (319)
T ss_pred             ccccCCCCCC-CC-CEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccce--eeEEEEEeCCCCCCCCCCCEEEEec
Confidence            4555677755 77 99999999999999998877664311  12346789999  556999999999999999999985 


Q ss_pred             -----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC
Q 019042          107 -----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV  181 (347)
Q Consensus       107 -----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~  181 (347)
                           |+|++|+.++.+. ++++ |++++.. +++.++..+.+||+++.....+.+|++|+|+|++|++|++++++|+..
T Consensus        91 ~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~  167 (319)
T cd08267          91 PPKGGGALAEYVVAPESG-LAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKAL  167 (319)
T ss_pred             cCCCCceeeEEEEechhh-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc
Confidence                 6899999999988 9999 9995544 588899999999999988777999999999999999999999999999


Q ss_pred             CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCch--hHHHHHHhhccCCEEEEEcc
Q 019042          182 GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGK--MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       182 G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |++|++++++ ++.+.++ ++|++++++.... ++.   ...+.+ ++|+++||+++.  .....+..++++|+++.+|.
T Consensus       168 g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~  241 (319)
T cd08267         168 GAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGG  241 (319)
T ss_pred             CCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecc
Confidence            9999999865 7788887 8999888877654 443   334444 899999999853  33444445999999999987


Q ss_pred             cccccCCCCccccc--hHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCC
Q 019042          259 ISQYNLEKPEGVHN--LMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQN  336 (347)
Q Consensus       259 ~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~  336 (347)
                      ......    ....  ..........+......  +.  .+.++++.+++.++.+.+.+...|+++++++|++.+.++..
T Consensus       242 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~  313 (319)
T cd08267         242 GPSGLL----LVLLLLPLTLGGGGRRLKFFLAK--PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRA  313 (319)
T ss_pred             cccccc----ccccccchhhccccceEEEEEec--CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCC
Confidence            542210    0000  01111112222222211  11  67899999999999998888888999999999999998887


Q ss_pred             cceEEE
Q 019042          337 VGKQLV  342 (347)
Q Consensus       337 ~gkivi  342 (347)
                      .+|+++
T Consensus       314 ~~~vvv  319 (319)
T cd08267         314 RGKVVI  319 (319)
T ss_pred             CCcEeC
Confidence            888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=3.9e-31  Score=233.99  Aligned_cols=279  Identities=21%  Similarity=0.257  Sum_probs=229.4

Q ss_pred             EEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec--cCcceeEeecCCCcceecc
Q 019042           48 LKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEYSLIQSPQHLIKIL  125 (347)
Q Consensus        48 ikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~--g~~~~~~~~~~~~~~~~i~  125 (347)
                      ||+.++++|+.|+....+.+    ..|.++|||  ++|.|+.+|++++.+++||+|+++  |+|++|+.++.+. ++++ 
T Consensus         2 i~v~~~~i~~~d~~~~~g~~----~~~~~~g~e--~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~~-   73 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL----PGEAVLGGE--CAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARL-VVPI-   73 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC----CCCCCCCce--eEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHH-eEEC-
Confidence            79999999999998877643    236889999  556999999999999999999996  7999999999988 9999 


Q ss_pred             CCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-
Q 019042          126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-  204 (347)
Q Consensus       126 P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-  204 (347)
                      |++++.. +++++++.+.+||.++.....+.+|++|+|+|+.|++|++++++++..|++|+++++++++.+.++ ++|+ 
T Consensus        74 p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~  151 (288)
T smart00829       74 PDGLSFE-EAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIP  151 (288)
T ss_pred             CCCCCHH-HHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCC
Confidence            9995554 578888999999999877789999999999999999999999999999999999999999999998 8998 


Q ss_pred             -CeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccce
Q 019042          205 -DDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIR  282 (347)
Q Consensus       205 -~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                       +.++++.+. ++.+.+.+.+++ ++|+++|++++..+..++++++++|+++.+|......    ....+.. .+.++++
T Consensus       152 ~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~~-~~~~~~~  225 (288)
T smart00829      152 DDHIFSSRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGMA-PFRRNVS  225 (288)
T ss_pred             hhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccchh-hhcCCce
Confidence             778888776 788888887766 8999999999888889999999999999998643210    0111222 2456666


Q ss_pred             eeeeEeccc---ccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          283 MEGFLAGDF---YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       283 ~~g~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +.+.....+   +....+.+.++.+++.++.+.+.....|+++++.++++.+..+...||+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      226 YHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             EEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            666544321   222345678889999999887766678899999999999998877788874

Enoylreductase in Polyketide synthases.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.7e-31  Score=234.41  Aligned_cols=229  Identities=17%  Similarity=0.199  Sum_probs=187.1

Q ss_pred             CCCCceeeceEEEEecCCCC------CCCCCCEEEe-------------------------------------ccCccee
Q 019042           76 NPGEPLSGYGVSKVLDSTHP------NYKKDDLVWG-------------------------------------LTSWEEY  112 (347)
Q Consensus        76 v~G~e~~g~G~v~~vG~~v~------~~~vGd~V~~-------------------------------------~g~~~~~  112 (347)
                      ++|||++  |+|+++|++|+      ++++||||+.                                     .|+|+||
T Consensus         1 v~GHE~~--G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey   78 (280)
T TIGR03366         1 VLGHEIV--GEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEH   78 (280)
T ss_pred             CCCcccc--eEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceee
Confidence            5899955  59999999999      8999999963                                     1678999


Q ss_pred             EeecCC-CcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeC
Q 019042          113 SLIQSP-QHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAG  190 (347)
Q Consensus       113 ~~~~~~-~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~  190 (347)
                      ++++++ . ++++ |++++.. +++.+++.+.|||+++.. ....+|++|+|+|+ |++|++++|+|+++|++ |+++++
T Consensus        79 ~~v~~~~~-~~~l-P~~~~~~-~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~  153 (280)
T TIGR03366        79 CHLPAGTA-IVPV-PDDLPDA-VAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADP  153 (280)
T ss_pred             EEecCCCc-EEEC-CCCCCHH-HhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence            999987 6 9999 9996554 578888899999999855 45669999999986 99999999999999996 888988


Q ss_pred             CHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCc
Q 019042          191 SKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPE  268 (347)
Q Consensus       191 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  268 (347)
                      +++|+++++ ++|+++++++.+   ..+.+.+++.+ ++|++||++|. ..++.++++++++|+++.+|.....    ..
T Consensus       154 ~~~r~~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~  225 (280)
T TIGR03366       154 SPDRRELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GP  225 (280)
T ss_pred             CHHHHHHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----Cc
Confidence            999999999 999998887643   34556666665 89999999987 5789999999999999999974321    11


Q ss_pred             cccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcC--Ccc--cccceeeccccH
Q 019042          269 GVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEG--KLV--YVEDIAEGLEKA  324 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--~~~--~~~~~~~~~~~~  324 (347)
                      ...+...++.+++++.|+....     .+.++++++++.++  +++  +.++++|+++|+
T Consensus       226 ~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       226 VALDPEQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             eeeCHHHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            2345667788999999986544     56789999999974  443  558888899874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=3.2e-29  Score=220.05  Aligned_cols=242  Identities=28%  Similarity=0.325  Sum_probs=199.5

Q ss_pred             eEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec------------------
Q 019042           45 TVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL------------------  106 (347)
Q Consensus        45 evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~------------------  106 (347)
                      ||+||+.++++|+.|+....+.......+|.++|||  ++|+|+++|++++.+++||+|+++                  
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e--~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~   78 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHE--GAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG   78 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccc--cEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence            689999999999999988877543234557899999  556999999999999999999974                  


Q ss_pred             --------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHH
Q 019042          107 --------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFA  178 (347)
Q Consensus       107 --------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla  178 (347)
                              |+|++|+.++.+. ++++ |++++.. +++.++.++.+||+++.....+.++++|+|+|+++ +|+++++++
T Consensus        79 ~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a  154 (271)
T cd05188          79 GILGEGLDGGFAEYVVVPADN-LVPL-PDGLSLE-EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLA  154 (271)
T ss_pred             CEeccccCCcceEEEEechHH-eEEC-CCCCCHH-HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHH
Confidence                    6799999999998 9999 9995554 58888899999999998877779999999999866 999999999


Q ss_pred             HHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          179 KLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       179 ~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      +..|.+|+++++++++.+.++ ++|+++++++.+. ++.+.+. .+.+ ++|++|++++. .....++++++++|+++.+
T Consensus       155 ~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~  231 (271)
T cd05188         155 KAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV  231 (271)
T ss_pred             HHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEE
Confidence            999999999999999999998 8998888887765 6666665 4444 89999999998 7889999999999999999


Q ss_pred             cccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHH
Q 019042          257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPA  305 (347)
Q Consensus       257 g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  305 (347)
                      +......     ........+.+++++.++....     ...+++++++
T Consensus       232 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  270 (271)
T cd05188         232 GGTSGGP-----PLDDLRRLLFKELTIIGSTGGT-----REDFEEALDL  270 (271)
T ss_pred             ccCCCCC-----CcccHHHHHhcceEEEEeecCC-----HHHHHHHHhh
Confidence            8754321     1122455677899999988765     3455555544

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.97  E-value=1.2e-29  Score=241.70  Aligned_cols=296  Identities=20%  Similarity=0.202  Sum_probs=244.8

Q ss_pred             EEEeecccCC--CCCCCCCeEEEEEEEeecChhccccccCCCCCCc------ccCCCCCCceeeceEEEEecCCCCCCCC
Q 019042           28 KIITGSINLK--VPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSF------VASFNPGEPLSGYGVSKVLDSTHPNYKK   99 (347)
Q Consensus        28 ~~~~~~~~~p--~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~------~~p~v~G~e~~g~G~v~~vG~~v~~~~v   99 (347)
                      .+++.+.|..  .|..+ +.=+.-|-|+.+|..|+-...|...+..      .-..++|-||+|            ..+-
T Consensus      1428 SlrWies~~~~a~~~~~-~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsG------------Rd~~ 1494 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTCP-GLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSG------------RDAS 1494 (2376)
T ss_pred             ceeeeecchhhcCCCCC-CCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecc------------ccCC
Confidence            4666666654  45566 8888999999999999977777543211      114667777766            2678


Q ss_pred             CCEEEec---cCcceeEeecCCCcceeccCCCCCccc-cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHH
Q 019042          100 DDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSY-YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVG  175 (347)
Q Consensus       100 Gd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~-~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~  175 (347)
                      |.||+++   -++++.+.++.+. ++.+ |++  +.. +|++.|+.|.|||++|..+..+++|+++||++++||+|++||
T Consensus      1495 GrRvM~mvpAksLATt~l~~rd~-lWev-P~~--WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAI 1570 (2376)
T KOG1202|consen 1495 GRRVMGMVPAKSLATTVLASRDF-LWEV-PSK--WTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAI 1570 (2376)
T ss_pred             CcEEEEeeehhhhhhhhhcchhh-hhhC-Ccc--cchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHH
Confidence            9999998   4788889999888 9999 999  555 699999999999999999999999999999999999999999


Q ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCC---CeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCC
Q 019042          176 QFAKLVGCYVVGSAGSKEKVNLLKNKFGF---DDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHG  251 (347)
Q Consensus       176 qla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G  251 (347)
                      .+|.++|++|+.++.+.+|++++.+.|..   .+.-|.++. +|..-+...|.| |+|+|++....+.++.+++||+.+|
T Consensus      1571 aiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~G 1649 (2376)
T KOG1202|consen 1571 AIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHG 1649 (2376)
T ss_pred             HHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcC
Confidence            99999999999999999999999866654   345566665 899999999988 9999999999999999999999999


Q ss_pred             EEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHH----cCCcccccceeeccccHHHH
Q 019042          252 RIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIK----EGKLVYVEDIAEGLEKAPSA  327 (347)
Q Consensus       252 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~a  327 (347)
                      |+..+|--.-     ....+.....+.+|.+++|.....+.+.-.+.+.++..+++    +|..+|+.+.+|+-.++++|
T Consensus      1650 RFLEIGKfDL-----SqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~A 1724 (2376)
T KOG1202|consen 1650 RFLEIGKFDL-----SQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDA 1724 (2376)
T ss_pred             eeeeecceec-----ccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHH
Confidence            9999987432     23345567788899999999877764444555666665555    56778999999999999999


Q ss_pred             HHHhHcCCCcceEEEEeCC
Q 019042          328 LVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       328 ~~~~~~~~~~gkivi~~~~  346 (347)
                      |+.+.+|+++||+|+++-+
T Consensus      1725 FRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1725 FRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred             HHHHhccCccceEEEEEcc
Confidence            9999999999999999854

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=2.8e-27  Score=208.73  Aligned_cols=248  Identities=23%  Similarity=0.258  Sum_probs=195.9

Q ss_pred             ccCCCCCCceeeceEEEEecCCCCCCCCCCEEEeccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhh
Q 019042           72 VASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYE  151 (347)
Q Consensus        72 ~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~  151 (347)
                      ++|.++|||  ++|+|+.+|++++++++||+|++++.|++|++++.+. ++++ |++++.. +++.+ ..+.+||+++. 
T Consensus        19 ~~p~v~g~e--~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~-~~~i-p~~l~~~-~aa~~-~~~~ta~~~~~-   91 (277)
T cd08255          19 PLPLPPGYS--SVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANL-LVPL-PDGLPPE-RAALT-ALAATALNGVR-   91 (277)
T ss_pred             cCCcccCcc--eeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHH-eeEC-cCCCCHH-HhHHH-HHHHHHHHHHH-
Confidence            468999999  5569999999999999999999999999999999998 9999 9995544 46666 78999999985 


Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhC-CCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFG-FDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ..++++|++++|+| .|++|++++++|+++|++ |+++++++++.+.++ ++| ++.+++..+  ..      ..++++|
T Consensus        92 ~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~------~~~~~~d  161 (277)
T cd08255          92 DAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTA--DE------IGGRGAD  161 (277)
T ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccch--hh------hcCCCCC
Confidence            68999999999997 599999999999999998 999999999999888 888 455544322  11      1223799


Q ss_pred             EEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc---c----cchHHHHHH
Q 019042          230 IYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF---Y----HQYPKFLEL  301 (347)
Q Consensus       230 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~----~~~~~~~~~  301 (347)
                      ++|||++. ..+..++++++++|+++.+|.....      .......+..+.+++.+......   .    ....+.+++
T Consensus       162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (277)
T cd08255         162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEE  235 (277)
T ss_pred             EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeecccccccccccccccccccHHH
Confidence            99999875 6888999999999999999875421      11112234445667776654432   0    123467899


Q ss_pred             HHHHHHcCCcccccceeeccccHHHHHHHhHcC-CCcceEEE
Q 019042          302 VMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTG-QNVGKQLV  342 (347)
Q Consensus       302 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkivi  342 (347)
                      ++++++++.+++.+.+.++++++++|++.+.++ ....|+++
T Consensus       236 ~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         236 ALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             HHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            999999999988778889999999999999877 34457653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.79  E-value=4.8e-18  Score=132.24  Aligned_cols=127  Identities=28%  Similarity=0.475  Sum_probs=114.5

Q ss_pred             hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCC-chhHHHHHHh
Q 019042          169 AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVG-GKMLDAVLLN  246 (347)
Q Consensus       169 ~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g-~~~~~~~~~~  246 (347)
                      ++|++++|+|++.|++|++++++++|+++++ ++|+++++++++. ++.+++++++++ ++|++|||+| ...++.++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~   78 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL   78 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence            6899999999999999999999999999999 9999999999987 899999999998 9999999999 5899999999


Q ss_pred             hccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHH
Q 019042          247 MRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIK  307 (347)
Q Consensus       247 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  307 (347)
                      ++++|+++.+|.+..     .....+...++.+++++.|+....     .+.+++++++++
T Consensus        79 l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la  129 (130)
T PF00107_consen   79 LRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA  129 (130)
T ss_dssp             EEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred             hccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence            999999999998752     334667889999999999998877     677777777765

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.67  E-value=1.3e-16  Score=119.97  Aligned_cols=79  Identities=18%  Similarity=0.132  Sum_probs=64.0

Q ss_pred             CCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec----------------
Q 019042           43 KDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL----------------  106 (347)
Q Consensus        43 ~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~----------------  106 (347)
                      |+|||||+.++|||++|++.+.+.......+|+++|||  ++|+|+++|++++.|++||+|+..                
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE--~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHE--GVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SE--EEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccc--eeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            39999999999999999999988544556789999999  556999999999999999999863                


Q ss_pred             --------------cCcceeEeecCCCcceec
Q 019042          107 --------------TSWEEYSLIQSPQHLIKI  124 (347)
Q Consensus       107 --------------g~~~~~~~~~~~~~~~~i  124 (347)
                                    |+|++|++++++. ++|+
T Consensus        79 ~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGLGLDGGFAEYVVVPARN-LVPV  109 (109)
T ss_dssp             GGTTTBEETTTSSTCSSBSEEEEEGGG-EEEE
T ss_pred             ccCCCCCEeEcCCCCcccCeEEEehHH-EEEC
Confidence                          5778888877777 6654

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.57  E-value=5.1e-15  Score=114.59  Aligned_cols=122  Identities=26%  Similarity=0.300  Sum_probs=81.2

Q ss_pred             hCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC--ch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHh
Q 019042          202 FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG--GK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVG  278 (347)
Q Consensus       202 ~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      ||+++++||+.. ++      ..++++|+|||++|  ++ .+..++++| ++|+++.++..           ........
T Consensus         1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~-----------~~~~~~~~   61 (127)
T PF13602_consen    1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD-----------LPSFARRL   61 (127)
T ss_dssp             CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH-----------HHHHHHHH
T ss_pred             CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc-----------ccchhhhh
Confidence            689999999975 66      22348999999999  64 347777888 99999988740           11111112


Q ss_pred             ccceeeeeEecccc--cchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          279 KRIRMEGFLAGDFY--HQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       279 ~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                      +...+.........  ....+.++++.+++++|++++.+.++||++++.+|++.+.+++..||+||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            22222322222111  12456799999999999999999999999999999999999999999997

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.38  E-value=1.2e-11  Score=112.83  Aligned_cols=177  Identities=12%  Similarity=0.086  Sum_probs=131.6

Q ss_pred             hhhHHHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHH
Q 019042          142 GLTAYGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL  220 (347)
Q Consensus       142 ~~tA~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i  220 (347)
                      +-..|.++.+..++ .+|++|+|.|+ |.+|+.+++.++..|++|+++..++.|.+.++ .+|+.. ++      ..+.+
T Consensus       185 g~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~-~~------~~e~v  255 (413)
T cd00401         185 RESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEV-MT------MEEAV  255 (413)
T ss_pred             chhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEE-cc------HHHHH
Confidence            34456666554444 68999999995 99999999999999999999999999999998 888843 22      12222


Q ss_pred             HHHCCCCccEEEECCCch-hHHHH-HHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHH
Q 019042          221 KRCFPEGIDIYFENVGGK-MLDAV-LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF  298 (347)
Q Consensus       221 ~~~~~~~~d~vid~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  298 (347)
                           .++|+||+|+|.. .+... +..++++|+++.+|..        ....+...+..+++++.++.....    ...
T Consensus       256 -----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~  318 (413)
T cd00401         256 -----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYE  318 (413)
T ss_pred             -----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEE
Confidence                 2489999999984 66665 8999999999999853        123566677778888888765431    113


Q ss_pred             HH--HHHHHHHcCCc---cccccee-----eccc-cHHHHHHHhHcCCC-cceEEEEe
Q 019042          299 LE--LVMPAIKEGKL---VYVEDIA-----EGLE-KAPSALVGIFTGQN-VGKQLVVV  344 (347)
Q Consensus       299 ~~--~~~~~~~~g~~---~~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gkivi~~  344 (347)
                      ++  ..+.++++|++   .+.+++.     ++|+ |+.+++..+.++.. .-|+++.+
T Consensus       319 ~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         319 LPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             cCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence            44  68899999988   3446666     6888 99999999887653 34776654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.30  E-value=7.1e-11  Score=110.42  Aligned_cols=149  Identities=14%  Similarity=0.050  Sum_probs=106.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-EecCCh------------hhHHHHHH
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-FNYKKE------------PDLDAALK  221 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~------------~~~~~~i~  221 (347)
                      ..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++++.++ ++|++.+ +|..+.            .++.+...
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            457999999996 99999999999999999999999999999999 9999843 554321            02333333


Q ss_pred             HH-CC--CCccEEEECCCch------h-HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHh-ccceeeeeEecc
Q 019042          222 RC-FP--EGIDIYFENVGGK------M-LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVG-KRIRMEGFLAGD  290 (347)
Q Consensus       222 ~~-~~--~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~  290 (347)
                      +. .+  +++|++|+|++.+      . .+..++.++++|+++.++...+.+.   ........++. +++++.|+... 
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~---e~t~~~~~v~~~~gVti~Gv~n~-  315 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNC---ELTVPGEVVVTDNGVTIIGYTDL-  315 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCc---ccccCccceEeECCEEEEEeCCC-
Confidence            33 32  2699999999852      4 4999999999999999987533221   11222334454 78888887532 


Q ss_pred             cccchHHHHHHHHHHHHcCCccc
Q 019042          291 FYHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                       +   .+.-.+..+++.++.+..
T Consensus       316 -P---~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        316 -P---SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             -c---hhHHHHHHHHHHhCCccH
Confidence             2   122335788888887754

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.66  E-value=4.7e-07  Score=79.08  Aligned_cols=233  Identities=14%  Similarity=0.162  Sum_probs=132.7

Q ss_pred             eceEEEEecCCCCCCCCCCEEEeccCcceeEeecCCC----c-------------------------ceeccCCCCCccc
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQ----H-------------------------LIKILDTNVPLSY  133 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~----~-------------------------~~~i~P~~~~~~~  133 (347)
                      .+|..+++.+++.++.+|.||+|+-..++++.+....    .                         .+.  |+.   ..
T Consensus        35 vWGfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~--~~~---e~  109 (314)
T PF11017_consen   35 VWGFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD--PER---ED  109 (314)
T ss_pred             cceEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC--cch---hH
Confidence            3466788889999999999999985444444433222    0                         111  111   10


Q ss_pred             cccccCCchhhHHHHhhhh---cCCCCCCEEEEEcCCChHHHHHHHHHH-HC-CCEEEEEeCCHHHHHHHHHHhCC-Cee
Q 019042          134 YTGILGMPGLTAYGGLYEL---CSPKKGEYVYVSAASGAVGQLVGQFAK-LV-GCYVVGSAGSKEKVNLLKNKFGF-DDA  207 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~---~~~~~~~~vlI~ga~g~vG~~a~qla~-~~-G~~V~~~~~~~~~~~~~~~~~g~-~~v  207 (347)
                      ..+.+--.+.|.|..- +.   .+.-..+.|+|..|+|-.++..+.+++ .. +.+++.+++..++ .+.+ .+|+ +.|
T Consensus       110 ~~~LlrPLf~Tsfll~-d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~-~Fve-~lg~Yd~V  186 (314)
T PF11017_consen  110 WQMLLRPLFITSFLLD-DFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNV-AFVE-SLGCYDEV  186 (314)
T ss_pred             HHHHHHHHHHHHHHHH-HHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcch-hhhh-ccCCceEE
Confidence            1222222334444321 21   122345789999999999999999998 44 4499999977665 6888 9998 678


Q ss_pred             EecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCC-EEEEEcccccccCC------CCc-cccchHHHHh
Q 019042          208 FNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHG-RIAVCGMISQYNLE------KPE-GVHNLMQVVG  278 (347)
Q Consensus       208 i~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G-~~v~~g~~~~~~~~------~~~-~~~~~~~~~~  278 (347)
                      +.|++       +.++.....-+++|.+|. +....+...++..= ..+.+|.+......      .+. ..++....+.
T Consensus       187 ~~Yd~-------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~  259 (314)
T PF11017_consen  187 LTYDD-------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQID  259 (314)
T ss_pred             eehhh-------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHH
Confidence            88864       333322356889999998 46666666666653 45566654432110      111 1122333333


Q ss_pred             ccceeeeeEecccccchHHHHHHHHHHHHcCCcccc-cceeeccccHHHHHHHhHcCCC
Q 019042          279 KRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV-EDIAEGLEKAPSALVGIFTGQN  336 (347)
Q Consensus       279 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~~~~  336 (347)
                      +++.-.|..      .+.+.+.+....+.+...... +...-..+.+.++++.+.+|+.
T Consensus       260 kr~~~~G~~------~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  260 KRIKEWGAA------EFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             HHHHHhCHH------HHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence            444333322      112222222222222222222 3344589999999999998863

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.51  E-value=1.2e-06  Score=82.13  Aligned_cols=105  Identities=18%  Similarity=0.182  Sum_probs=80.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCC------------hhhHHHHHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKK------------EPDLDAALKR  222 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~------------~~~~~~~i~~  222 (347)
                      .++++|+|.|+ |.+|+++++.++.+|++|++++.+.++++.++ ++|+.. .++..+            ..++.+...+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            35789999996 99999999999999999999999999999999 899865 233211            0134443344


Q ss_pred             HCC---CCccEEEECC---Cc-h---hHHHHHHhhccCCEEEEEcccccc
Q 019042          223 CFP---EGIDIYFENV---GG-K---MLDAVLLNMRIHGRIAVCGMISQY  262 (347)
Q Consensus       223 ~~~---~~~d~vid~~---g~-~---~~~~~~~~l~~~G~~v~~g~~~~~  262 (347)
                      ++.   .++|++|+|+   |. .   ..+..++.+++++.+|+++...+.
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GG  289 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGG  289 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCC
Confidence            333   2699999999   54 2   567889999999999999875543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.44  E-value=1.7e-06  Score=72.28  Aligned_cols=81  Identities=26%  Similarity=0.366  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC----CeeEecCChhhHHHHHHHHCCC--CccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF----DDAFNYKKEPDLDAALKRCFPE--GIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~~--~~d~  230 (347)
                      +++.++|+||+||+|.+.++.+...|++|+.+.|+.++++.+.++++.    ...+|..+..+..+.+..+...  .+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            457899999999999999999999999999999999999999888983    2356666643555555555443  6999


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      ++++.|-
T Consensus        85 LvNNAGl   91 (246)
T COG4221          85 LVNNAGL   91 (246)
T ss_pred             EEecCCC
Confidence            9999983

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.36  E-value=3.6e-06  Score=73.91  Aligned_cols=170  Identities=16%  Similarity=0.201  Sum_probs=99.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      +.+.+|++||.+|. |+ |..+.++++..|.  +|++++.+++..+.+++.   .+...+ ..... ++.+ + .+..+.
T Consensus        73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~~  146 (272)
T PRK11873         73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADNS  146 (272)
T ss_pred             ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCCc
Confidence            56789999999994 55 8888888888765  799999999988888732   233222 11111 2211 1 112237


Q ss_pred             ccEEEECCC-----c--hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHH
Q 019042          228 IDIYFENVG-----G--KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLE  300 (347)
Q Consensus       228 ~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  300 (347)
                      +|+|+....     +  ..+..+.+.|+++|+++..+.....         .....+.+...+.+......     ...+
T Consensus       147 fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-----~~~~  212 (272)
T PRK11873        147 VDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG---------ELPEEIRNDAELYAGCVAGA-----LQEE  212 (272)
T ss_pred             eeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC---------CCCHHHHHhHHHHhccccCC-----CCHH
Confidence            999986532     2  4789999999999999987654321         11111112222221111110     1123


Q ss_pred             HHHHHHHcCCcc---cccceeeccccHHHHHHHh--HcCCCcceEEE
Q 019042          301 LVMPAIKEGKLV---YVEDIAEGLEKAPSALVGI--FTGQNVGKQLV  342 (347)
Q Consensus       301 ~~~~~~~~g~~~---~~~~~~~~~~~~~~a~~~~--~~~~~~gkivi  342 (347)
                      ++.+++++.-+.   ......+++++..++++.+  .+++..++.+.
T Consensus       213 e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        213 EYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             HHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence            455556553333   2334456888999999888  55554444443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.27  E-value=1.2e-05  Score=73.91  Aligned_cols=104  Identities=19%  Similarity=0.200  Sum_probs=78.2

Q ss_pred             hhHHHHhhhhcCCC-CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHH
Q 019042          143 LTAYGGLYELCSPK-KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALK  221 (347)
Q Consensus       143 ~tA~~~l~~~~~~~-~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~  221 (347)
                      ..+|.++.+..++. .|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+. ..|+. +.      ++.+.+.
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~  266 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE  266 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh
Confidence            45566665543544 8999999995 99999999999999999999998888766655 55653 22      2222222


Q ss_pred             HHCCCCccEEEECCCch-hHH-HHHHhhccCCEEEEEcccc
Q 019042          222 RCFPEGIDIYFENVGGK-MLD-AVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       222 ~~~~~~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~~  260 (347)
                           ++|++|+|+|.. .+. ..+..+++++.++..|...
T Consensus       267 -----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        267 -----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             -----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence                 489999999874 555 5788999999999988743

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.22  E-value=2.3e-05  Score=71.72  Aligned_cols=103  Identities=20%  Similarity=0.231  Sum_probs=77.2

Q ss_pred             hhHHHHhhhhcC-CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHH
Q 019042          143 LTAYGGLYELCS-PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALK  221 (347)
Q Consensus       143 ~tA~~~l~~~~~-~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~  221 (347)
                      ..++.++.+..+ ..+|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+. ..|+. +.      +..+.++
T Consensus       179 ~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~------~leeal~  249 (406)
T TIGR00936       179 QSTIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VM------TMEEAAK  249 (406)
T ss_pred             hhHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eC------CHHHHHh
Confidence            445555545434 368999999995 99999999999999999999988887766666 56652 22      1222232


Q ss_pred             HHCCCCccEEEECCCch-hHH-HHHHhhccCCEEEEEccc
Q 019042          222 RCFPEGIDIYFENVGGK-MLD-AVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       222 ~~~~~~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~  259 (347)
                           +.|++|++.|.. .+. ..+..+++++.++.+|..
T Consensus       250 -----~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       250 -----IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             -----cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence                 479999999984 455 488899999999998864

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=98.17  E-value=2.8e-05  Score=71.89  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=78.5

Q ss_pred             hhHHHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHH
Q 019042          143 LTAYGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALK  221 (347)
Q Consensus       143 ~tA~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~  221 (347)
                      -..+.++.+..++ -.|++|+|.|. |.+|+.+++.++..|++|+++..++.+...+. ..|... +      ++.+.+.
T Consensus       238 qS~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~v-v------~leEal~  308 (477)
T PLN02494        238 HSLPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQV-L------TLEDVVS  308 (477)
T ss_pred             ccHHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCee-c------cHHHHHh
Confidence            3346666555444 57999999995 99999999999999999999998887755665 566542 2      2223332


Q ss_pred             HHCCCCccEEEECCCch-h-HHHHHHhhccCCEEEEEccc
Q 019042          222 RCFPEGIDIYFENVGGK-M-LDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       222 ~~~~~~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~~  259 (347)
                           ..|+++++.|.. . ....+..|++++.++.+|..
T Consensus       309 -----~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        309 -----EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             -----hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence                 389999999985 3 48899999999999999874

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.16  E-value=6e-05  Score=68.95  Aligned_cols=99  Identities=18%  Similarity=0.220  Sum_probs=71.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC--
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV--  235 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~--  235 (347)
                      +.+|+|.|+ |.+|+.+++.++.+|++|++++++.++.+.+...++......+.+..++.+.+.     .+|++|+|+  
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence            456999996 999999999999999999999999888877764566532222332213333332     489999997  


Q ss_pred             -Cc--h--hHHHHHHhhccCCEEEEEcccccc
Q 019042          236 -GG--K--MLDAVLLNMRIHGRIAVCGMISQY  262 (347)
Q Consensus       236 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~~  262 (347)
                       +.  .  .....++.+++++.++.++...+.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG  272 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG  272 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence             33  1  237777889999999999875544

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.13  E-value=2.1e-05  Score=67.54  Aligned_cols=82  Identities=17%  Similarity=0.221  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-----ee--EecCChhhHHHHHHHHCCC--
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-----DA--FNYKKEPDLDAALKRCFPE--  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-----~v--i~~~~~~~~~~~i~~~~~~--  226 (347)
                      ..+.+++|+||++|+|...+..+...|.+++.+.|+.++++.+.+++.-.     ++  +|..+.++......++...  
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999999988776555431     23  3444442333333333332  


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      .+|+.++++|-
T Consensus        84 ~IdvLVNNAG~   94 (265)
T COG0300          84 PIDVLVNNAGF   94 (265)
T ss_pred             cccEEEECCCc
Confidence            79999999983

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.09  E-value=9.5e-05  Score=65.52  Aligned_cols=94  Identities=21%  Similarity=0.294  Sum_probs=73.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .+++|+|+|. |.+|+.+++.++.+|++|++..++.++.+.++ ++|+.. +.+.   ++.+.+.     .+|+||+|++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~-~~~~---~l~~~l~-----~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSP-FHLS---ELAEEVG-----KIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCee-ecHH---HHHHHhC-----CCCEEEECCC
Confidence            5899999995 99999999999999999999999988888887 788653 2221   3333332     4899999987


Q ss_pred             ch-hHHHHHHhhccCCEEEEEccccc
Q 019042          237 GK-MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       237 ~~-~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      .. .....++.+++++.++.++...+
T Consensus       220 ~~~i~~~~l~~~~~g~vIIDla~~pg  245 (296)
T PRK08306        220 ALVLTKEVLSKMPPEALIIDLASKPG  245 (296)
T ss_pred             hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence            64 34566778999999999987543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.02  E-value=7.5e-05  Score=64.03  Aligned_cols=104  Identities=20%  Similarity=0.218  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC---Cee--EecCChhhHHHHHHHHC--CCCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF---DDA--FNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~v--i~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      ++++++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+..   .+.  .|..+.+++.+.+.+..  .+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            467999999999999999999999999999999998877666323322   122  23333323333333221  13589


Q ss_pred             EEEECCCch------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          230 IYFENVGGK------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       230 ~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      .++.+.+..                        .++....+++.+|+++.+++..
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            999888731                        1344555667789999888754

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.02  E-value=3.8e-05  Score=62.21  Aligned_cols=79  Identities=15%  Similarity=0.289  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC--CeeEecCChh---hHHHHHHHHCCCCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF--DDAFNYKKEP---DLDAALKRCFPEGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~---~~~~~i~~~~~~~~d~v  231 (347)
                      .|.+|||+||++|+|+..++-....|-+||++.|++++++.++.....  ..+.|..+.+   .+.+.+.+..+ ..+++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl   82 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL   82 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence            367999999999999999999999999999999999999999844333  2345544431   23344443333 47999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      ++|+|
T Consensus        83 iNNAG   87 (245)
T COG3967          83 INNAG   87 (245)
T ss_pred             eeccc
Confidence            99988

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.01  E-value=9.7e-05  Score=63.96  Aligned_cols=145  Identities=18%  Similarity=0.253  Sum_probs=92.4

Q ss_pred             CCCCCCCCCEEEeccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHH
Q 019042           93 THPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQ  172 (347)
Q Consensus        93 ~v~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~  172 (347)
                      ..+.+++||+++...+|.+|.. +... ++++ +.+  +++..+..+.+ ...+..+..  ...++++||-.|. |. |.
T Consensus        63 ~~~p~~~g~~~~i~p~~~~~~~-~~~~-~i~i-~p~--~afgtg~h~tt-~~~l~~l~~--~~~~~~~VLDiGc-Gs-G~  132 (250)
T PRK00517         63 YFHPIRIGDRLWIVPSWEDPPD-PDEI-NIEL-DPG--MAFGTGTHPTT-RLCLEALEK--LVLPGKTVLDVGC-GS-GI  132 (250)
T ss_pred             HCCCEEEcCCEEEECCCcCCCC-CCeE-EEEE-CCC--CccCCCCCHHH-HHHHHHHHh--hcCCCCEEEEeCC-cH-HH
Confidence            3556889999998888988854 5556 8888 666  44322222222 222333322  3567899999994 54 88


Q ss_pred             HHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCee---EecCChhhHHHHHHHHCCCCccEEEECCCch----hHHHHH
Q 019042          173 LVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDA---FNYKKEPDLDAALKRCFPEGIDIYFENVGGK----MLDAVL  244 (347)
Q Consensus       173 ~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~i~~~~~~~~d~vid~~g~~----~~~~~~  244 (347)
                      +++.+++ .|+ +|++++.++...+.+++.+....+   +..... +          ..+|+|+.+....    .+..+.
T Consensus       133 l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~-~----------~~fD~Vvani~~~~~~~l~~~~~  200 (250)
T PRK00517        133 LAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG-D----------LKADVIVANILANPLLELAPDLA  200 (250)
T ss_pred             HHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC-C----------CCcCEEEEcCcHHHHHHHHHHHH
Confidence            7776554 666 699999999888777643321111   111110 0          0489999876543    456788


Q ss_pred             HhhccCCEEEEEccc
Q 019042          245 LNMRIHGRIAVCGMI  259 (347)
Q Consensus       245 ~~l~~~G~~v~~g~~  259 (347)
                      +.|+++|+++..+..
T Consensus       201 ~~LkpgG~lilsgi~  215 (250)
T PRK00517        201 RLLKPGGRLILSGIL  215 (250)
T ss_pred             HhcCCCcEEEEEECc
Confidence            899999999987653

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.00  E-value=0.00018  Score=63.40  Aligned_cols=79  Identities=16%  Similarity=0.284  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHH---HCCCCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKR---CFPEGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~---~~~~~~d~vi  232 (347)
                      .+++++|+||+|++|...++.+...|++|+++++++++.+.+. ..+... ..|..+.+++.+.+.+   ...+.+|++|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4578999999999999999999999999999999988877776 545432 2455554233333333   2334799999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      .+.|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9886

>PRK08324 short chain dehydrogenase; Validated

Probab=97.99  E-value=7.6e-05  Score=74.17  Aligned_cols=105  Identities=21%  Similarity=0.251  Sum_probs=73.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-----CeeEecCChhhHHHHHHHHC--CCCc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-----DDAFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-----~~vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      .+|++++|+|++|++|..+++.+...|++|++++++.++.+.+.+.++.     ....|..+.+++.+.+.+..  .+++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999998877666545543     12234444423333343332  1369


Q ss_pred             cEEEECCCch--------------------------hHHHHHHhhcc---CCEEEEEcccc
Q 019042          229 DIYFENVGGK--------------------------MLDAVLLNMRI---HGRIAVCGMIS  260 (347)
Q Consensus       229 d~vid~~g~~--------------------------~~~~~~~~l~~---~G~~v~~g~~~  260 (347)
                      |++|+++|..                          .++.+++.++.   +|+++.+++..
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~  560 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKN  560 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence            9999999821                          13444556665   68999988754

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.99  E-value=0.00013  Score=63.98  Aligned_cols=77  Identities=22%  Similarity=0.345  Sum_probs=57.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCC--CCccEEEECC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFP--EGIDIYFENV  235 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~--~~~d~vid~~  235 (347)
                      ++++|+||+|++|...++.+...|++|++++++.++.+.+. ..+... ..|..+.+++.+.+.....  +++|++|.+.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            47999999999999999999999999999999988777666 555432 2465554244444444322  3699999999


Q ss_pred             C
Q 019042          236 G  236 (347)
Q Consensus       236 g  236 (347)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            8

>PRK06182 short chain dehydrogenase; Validated

Probab=97.96  E-value=0.00015  Score=63.58  Aligned_cols=80  Identities=23%  Similarity=0.335  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      ++.+++|+|++|++|...++.+...|++|++++++.++.+.+. ..+.. ...|..+.+++.+.+.+...  +++|++|.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3578999999999999999999999999999999988776555 44443 23455554344444444322  36999999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      +.|.
T Consensus        81 ~ag~   84 (273)
T PRK06182         81 NAGY   84 (273)
T ss_pred             CCCc
Confidence            9873

>PRK12742 oxidoreductase; Provisional

Probab=97.95  E-value=0.0002  Score=61.29  Aligned_cols=102  Identities=20%  Similarity=0.203  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhCCCee-EecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKFGFDDA-FNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ++++++|+|++|++|...++.+...|++|+.+.+ ++++.+.+..+++...+ .|..+...+.+.+.+.  +++|++|.+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence            4689999999999999999999999999988765 44555554435565322 3443432333333322  368999999


Q ss_pred             CCch----h----------------------HHHHHHhhccCCEEEEEcccc
Q 019042          235 VGGK----M----------------------LDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       235 ~g~~----~----------------------~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      .|..    .                      ...+...++..|+++.+++..
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  134 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN  134 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence            8741    0                      123344566679999887654

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.88  E-value=0.00026  Score=61.70  Aligned_cols=80  Identities=14%  Similarity=0.170  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++.+++|+|++|++|...++.+...|++|++++++.++.+.+.++++.. .  ..|..+.+++.+.+.+...  +.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999999999999999999887666555355532 1  2344444244444433321  368999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+.|
T Consensus        85 v~~ag   89 (261)
T PRK08265         85 VNLAC   89 (261)
T ss_pred             EECCC
Confidence            99887

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.86  E-value=0.00013  Score=56.77  Aligned_cols=94  Identities=21%  Similarity=0.221  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ++.+++|.|+ |++|.+++..+...|+ +|+++.|+.+|.+.+.+.++..  ..++++   ++.+.+.     .+|++|.
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVIN   81 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEEE
Confidence            5789999996 9999999999999999 5999999999988877677443  244444   3333333     3999999


Q ss_pred             CCCchhHHHHHHhhccC----CEEEEEccc
Q 019042          234 NVGGKMLDAVLLNMRIH----GRIAVCGMI  259 (347)
Q Consensus       234 ~~g~~~~~~~~~~l~~~----G~~v~~g~~  259 (347)
                      |++.....-.-..++..    +.++.++.+
T Consensus        82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   82 ATPSGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             -SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             ecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence            99864211111223333    577777654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.86  E-value=0.00017  Score=64.48  Aligned_cols=107  Identities=21%  Similarity=0.216  Sum_probs=71.8

Q ss_pred             ceeccCCCCCccccccccCCchhhHHHHhhhhcC---CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Q 019042          121 LIKILDTNVPLSYYTGILGMPGLTAYGGLYELCS---PKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVN  196 (347)
Q Consensus       121 ~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~---~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~  196 (347)
                      .+++ |+.  +..+.+....+..+++.++.....   -.++.+|+|.|+ |.+|..+++.++..|+ +|+++.++.++..
T Consensus       141 a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         141 AIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            5666 777  333444444555666666633222   146899999996 9999999999998876 7889999988764


Q ss_pred             HHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhH
Q 019042          197 LLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKML  240 (347)
Q Consensus       197 ~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~  240 (347)
                      .+.+++|.. ++++.   ++.+.+.     .+|+||.|++.+..
T Consensus       217 ~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         217 ELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence            444388873 33331   3333333     38999999998543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.86  E-value=0.0002  Score=62.14  Aligned_cols=106  Identities=20%  Similarity=0.285  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCe-e----EecCChhhHHHHHHHHC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDD-A----FNYKKEPDLDAALKRCF--PE  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~-v----i~~~~~~~~~~~i~~~~--~~  226 (347)
                      .|+.|+|+||++|+|.+.+.-....|++++.+.+..++++.+.+   +.+..+ +    +|..+.++..+.+.+..  -|
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999888888899998888887776666521   333322 2    34444424444443222  24


Q ss_pred             CccEEEECCCch--------------------------hHHHHHHhhccC--CEEEEEcccccc
Q 019042          227 GIDIYFENVGGK--------------------------MLDAVLLNMRIH--GRIAVCGMISQY  262 (347)
Q Consensus       227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~  262 (347)
                      ++|+.++++|-.                          ..+.++..|++.  |++|.+++..+.
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence            799999999821                          124566666654  999999886543

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00057  Score=59.67  Aligned_cols=81  Identities=23%  Similarity=0.343  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC---eeEecCChhhHHHHHHHHC-CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD---DAFNYKKEPDLDAALKRCF-PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~-~~~~  228 (347)
                      ++++++|+|+++++|.+.++.+...|++|++++++.++.+.+.+++    +..   ...|..+.++..+.+.+.. .+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4789999999999999999999999999999999887766554333    321   1234444323444444332 1368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |+++.+.|.
T Consensus        87 D~lv~nag~   95 (263)
T PRK08339         87 DIFFFSTGG   95 (263)
T ss_pred             cEEEECCCC
Confidence            999999873

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00055  Score=62.00  Aligned_cols=105  Identities=24%  Similarity=0.193  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .|...   ..|..+.+++.+.+.+...  +++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            467999999999999999999999999999999998776554422   34421   2355454233333333221  369


Q ss_pred             cEEEECCCch--------------------------hHHHHHHhhcc--CCEEEEEccccc
Q 019042          229 DIYFENVGGK--------------------------MLDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       229 d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      |++|+++|..                          ....++..++.  .|++|.+++...
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~  147 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA  147 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence            9999998741                          11234455544  589998887543

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.76  E-value=0.00043  Score=65.95  Aligned_cols=105  Identities=12%  Similarity=0.178  Sum_probs=68.6

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CC-----Ce--eEecCChhh
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF--------GF-----DD--AFNYKKEPD  215 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~--------g~-----~~--vi~~~~~~~  215 (347)
                      ...+...|++++|+||+|++|..+++.+...|++|++++++.++.+.+.+.+        |.     ..  ..|..+.++
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            3456678999999999999999999999999999999999988765443221        21     11  234433312


Q ss_pred             HHHHHHHHCCCCccEEEECCCchh----------------HHHHHHhhcc--CCEEEEEcccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGKM----------------LDAVLLNMRI--HGRIAVCGMIS  260 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~  260 (347)
                          +.+.. +++|+||.|.|...                ...+++.++.  .|++|.+++..
T Consensus       153 ----I~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        153 ----IGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             ----HHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence                22222 35899999987520                1223333333  36899888754

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00022  Score=63.48  Aligned_cols=81  Identities=20%  Similarity=0.254  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--e--EecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--A--FNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--v--i~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +|++++|+|++|++|..+++.+...|++|++++++.++.+.+.++++.. .  .  .|..+.++..+.+.+...  +.+|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999988877665466531 1  1  455544234343333321  3699


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999984

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00056  Score=59.57  Aligned_cols=83  Identities=14%  Similarity=0.223  Sum_probs=57.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC----eeEecCChhhHHHHHHHHCC--CCc
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD----DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      .-++.+++|+|++|++|..+++.+...|++|+++.++++..+.+.+.....    ...|..+...+.+.+.+...  +++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            346789999999999999999999999999999999887666555233222    22344443233333332211  369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |+||.+.|.
T Consensus        88 d~vi~~ag~   96 (264)
T PRK12829         88 DVLVNNAGI   96 (264)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.72  E-value=4.8e-05  Score=73.92  Aligned_cols=96  Identities=17%  Similarity=0.243  Sum_probs=64.5

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC---------------------HHHHHHHHHHhCCCeeEecCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS---------------------KEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~---------------------~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      ...+|++|+|+|+ |++|+++++.++..|++|+++...                     +.+++.++ ++|++..++...
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence            4678999999996 999999999999999999998742                     34567777 889876555322


Q ss_pred             -hhhH-HHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEE
Q 019042          213 -EPDL-DAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       213 -~~~~-~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  256 (347)
                       . +. .+.+.    .++|+||+++|.. .....+.....+|.+..+
T Consensus       211 ~~-~~~~~~~~----~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~  252 (564)
T PRK12771        211 GE-DITLEQLE----GEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV  252 (564)
T ss_pred             CC-cCCHHHHH----hhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence             1 21 11221    2599999999974 333233333444544433

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.0031  Score=54.74  Aligned_cols=81  Identities=14%  Similarity=0.130  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHH---HhCCC---eeEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKN---KFGFD---DAFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|++|++|...++.+...|++ |++++++.++.+...+   ..+..   ...|..+.+++.+.+.....  ++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5689999999999999999999999998 9999988765543321   23432   12355444233333333211  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.+.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.69  E-value=0.00038  Score=64.70  Aligned_cols=91  Identities=20%  Similarity=0.221  Sum_probs=70.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      .-.|++|+|.|. |.+|..+++.++..|++|+++.+++.+...+. ..|+. +.      ++.+.++     ..|+|+.+
T Consensus       251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell~-----~ADIVI~a  316 (476)
T PTZ00075        251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVVE-----TADIFVTA  316 (476)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHHh-----cCCEEEEC
Confidence            347999999995 99999999999999999999988877654555 45653 22      2333333     38999999


Q ss_pred             CCch-hH-HHHHHhhccCCEEEEEccc
Q 019042          235 VGGK-ML-DAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       235 ~g~~-~~-~~~~~~l~~~G~~v~~g~~  259 (347)
                      .|.. .+ ...+..|++++.++.+|..
T Consensus       317 tGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        317 TGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             CCcccccCHHHHhccCCCcEEEEcCCC
Confidence            9874 44 4788999999999999864

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.69  E-value=0.00067  Score=55.43  Aligned_cols=106  Identities=17%  Similarity=0.296  Sum_probs=77.4

Q ss_pred             CCCEEEEEcC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhh---HHHHHHHHCCCCccEE
Q 019042          157 KGEYVYVSAA-SGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPD---LDAALKRCFPEGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga-~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~---~~~~i~~~~~~~~d~v  231 (347)
                      ....|||+|+ +||+|.+.+.-....|+.|+++.++.+.+..+..++|.. .-+|.+++++   +...++..+.|..|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            3568999986 579999999888899999999999999988887678863 3355554323   4445666666789999


Q ss_pred             EECCCchh-------------------------H--HHHHHhhccCCEEEEEcccccc
Q 019042          232 FENVGGKM-------------------------L--DAVLLNMRIHGRIAVCGMISQY  262 (347)
Q Consensus       232 id~~g~~~-------------------------~--~~~~~~l~~~G~~v~~g~~~~~  262 (347)
                      ++++|-+.                         .  .....+++..|++|.+|+..+.
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~  143 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV  143 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence            99888321                         0  1123467888999999986654

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00084  Score=57.87  Aligned_cols=81  Identities=12%  Similarity=0.135  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++...   ..|..+..+....+.....  +++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999998776665554666531   1233332122222222211  368999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.+.|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            998873

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.67  E-value=0.00046  Score=56.82  Aligned_cols=112  Identities=21%  Similarity=0.243  Sum_probs=76.9

Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEecCCh
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKE  213 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~  213 (347)
                      ++..+...|.  +.....++++++||=+|  .|.|+.++-+++..| +|+.+.+.++=.+.+++   .+|...|..... 
T Consensus        54 tis~P~~vA~--m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g-  127 (209)
T COG2518          54 TISAPHMVAR--MLQLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHG-  127 (209)
T ss_pred             eecCcHHHHH--HHHHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC-
Confidence            4444555555  22557999999999999  478999999999888 99999988774444432   567644322221 


Q ss_pred             hhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          214 PDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       214 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                       |-   ...+.+. .||.|+-+.+- ..-...++.|++||+++..-.
T Consensus       128 -DG---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         128 -DG---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             -Cc---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence             21   1112222 69999877766 455888999999999997654

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00041  Score=60.18  Aligned_cols=81  Identities=17%  Similarity=0.180  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      +|++|+|+||+|++|...++.+...|++|+++++++.+.+...++++.. ...|..+.+++.+.+.+...  +++|++|.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999999999999999999999999999999887766555355442 23455554233333333221  36899999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            8873

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.63  E-value=0.00045  Score=60.25  Aligned_cols=80  Identities=19%  Similarity=0.254  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+|++|++|...++.+...|++|+++.+++++.+.+.++++.. .  ..|..+.++..+.+.+...  +.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4679999999999999999999999999999999988877766455431 1  2344443234444443322  368999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        85 i~~ag   89 (263)
T PRK06200         85 VGNAG   89 (263)
T ss_pred             EECCC
Confidence            99887

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.63  E-value=0.00034  Score=52.24  Aligned_cols=95  Identities=22%  Similarity=0.274  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~-~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      |+.+||-.|  .|.|..++.+++. .+++|++++.+++-.+.+++..   +...-+..... |+ .... ...+++|+|+
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~-~~~~-~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA-EFDP-DFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC-HGGT-TTSSCEEEEE
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc-ccCc-ccCCCCCEEE
Confidence            678999998  4679999999984 6889999999999888888655   22211222222 33 1111 1123699999


Q ss_pred             ECC-Cc----h------hHHHHHHhhccCCEEEEE
Q 019042          233 ENV-GG----K------MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       233 d~~-g~----~------~~~~~~~~l~~~G~~v~~  256 (347)
                      ... ..    .      .++...+.|+|+|+++.-
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            877 22    1      277888899999999853

...

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.62  E-value=0.0011  Score=62.80  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--EKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~--~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++.+++|+|++|++|...++.+...|++|+++.++.  ++.+.+.++++.. ..+|..+.++..+.+.....  +++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            578999999999999999999999999999988743  3333333355543 23465554233333333221  268999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+.|
T Consensus       289 i~~AG  293 (450)
T PRK08261        289 VHNAG  293 (450)
T ss_pred             EECCC
Confidence            99988

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.001  Score=56.95  Aligned_cols=81  Identities=17%  Similarity=0.260  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC---Cee--EecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF---DDA--FNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~v--i~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++..   .+.  .|..+..++.+.+.+...  +++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            367899999999999999998888899999999988776655434432   111  244443244444443321  2689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99998763

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.001  Score=57.35  Aligned_cols=81  Identities=17%  Similarity=0.203  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...+..+...|++|+++.+++++.+.+.+.+   +.. .  ..|..+.+++.+.+.+...  +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999998887655443232   322 1  2344443233333332211  369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06484 short chain dehydrogenase; Validated

Probab=97.59  E-value=0.00092  Score=64.45  Aligned_cols=105  Identities=17%  Similarity=0.184  Sum_probs=73.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      .+++++|+|+++++|...++.+...|++|+++.++.++.+.+.++++...   ..|..+.+++.+.+.+...  +.+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999999888777764565432   2344444244444443322  368999


Q ss_pred             EECCCch------------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          232 FENVGGK------------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       232 id~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      |.++|..            .               .+.++..++.+|+++.+++...
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9988731            0               2334455666799999887543

>PRK09186 flagellin modification protein A; Provisional

Probab=97.59  E-value=0.0012  Score=57.08  Aligned_cols=80  Identities=19%  Similarity=0.212  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC---e-eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD---D-AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~-vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++.+++|+|++|++|...+..+...|++|+++++++++.+.+.+++    +..   . ..|..+.+++.+.+.+...  +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999887765443333    221   1 2354444234444443322  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.+.+
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            5899999885

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.0016  Score=56.55  Aligned_cols=79  Identities=19%  Similarity=0.288  Sum_probs=56.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CC---eeEecCChhhHHHHHHHHC---CCCccEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG-FD---DAFNYKKEPDLDAALKRCF---PEGIDIY  231 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g-~~---~vi~~~~~~~~~~~i~~~~---~~~~d~v  231 (347)
                      ++++|+||+|++|...++.+...|++|++++++.++.+.+.+.++ ..   ...|..+.+++.+.+....   .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            479999999999999999999999999999999887776653443 11   2345555434444444331   3468999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      +.|.|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999874

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00058  Score=61.71  Aligned_cols=80  Identities=21%  Similarity=0.316  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      ++++++|+|++|++|.+.++.+...|++|+++++++++++.+.+   +.|...   ..|..+.+++.+.+.+..  .+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999999887765442   335432   235544423333332221  2469


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|+++|
T Consensus        86 D~lVnnAG   93 (330)
T PRK06139         86 DVWVNNVG   93 (330)
T ss_pred             CEEEECCC
Confidence            99999998

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.00057  Score=59.96  Aligned_cols=80  Identities=15%  Similarity=0.196  Sum_probs=56.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CC-eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG-FD-DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      +.+++|+||+|++|...++.+...|++|+++.+++++.+.+.+.++ .. ...|..+.+++.+.+.+...  +++|++|.
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999999888899999999999887766543554 21 22455554244333333321  36899999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      +.|.
T Consensus        85 ~ag~   88 (273)
T PRK07825         85 NAGV   88 (273)
T ss_pred             CCCc
Confidence            9873

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.57  E-value=0.0014  Score=57.67  Aligned_cols=104  Identities=12%  Similarity=0.111  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---EKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~---~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      .+++++|+||+  +++|.++++.+...|++|+++.++.   ++.+.+.++++...  ..|..+.++..+.+.+...  +.
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999996  7999999999999999999988774   23343432455322  3455554244444444322  46


Q ss_pred             ccEEEECCCch------------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          228 IDIYFENVGGK------------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +|++|.+.|..                              ..+.++..++.+|+++.+++..
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence            99999998731                              0244556677789999887643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.56  E-value=0.00058  Score=59.54  Aligned_cols=80  Identities=24%  Similarity=0.268  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+||+|++|...++.+...|++|+++.++.++.+.+.+..+..   ...|..+.++..+.+.+...  +.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4689999999999999999999999999999999887776666333321   12344443234444443322  368999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.0014  Score=56.49  Aligned_cols=102  Identities=20%  Similarity=0.209  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHH---hCCC---eeEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|++|++|...+..+...|++|+++.++.+ +.+.+.++   .+..   ...|..+.+++.+.+.+...  ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999889999999887643 33322212   2321   12354444244444433322  25


Q ss_pred             ccEEEECCCch--------------------hHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGGK--------------------MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+++.+.|..                    .++.+...++.+|+++.+++
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            89999887631                    23444555556789988866

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00099  Score=57.26  Aligned_cols=79  Identities=22%  Similarity=0.285  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      ++.+++|+|++|++|...++.+...|++|++++++.++.+.+.+..+... ..|..+.+++.+.+..  .+++|++|.+.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence            46799999999999999999999999999999999887766653455432 2455443223333332  13689999998


Q ss_pred             Cc
Q 019042          236 GG  237 (347)
Q Consensus       236 g~  237 (347)
                      |.
T Consensus        86 g~   87 (245)
T PRK07060         86 GI   87 (245)
T ss_pred             CC
Confidence            73

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.53  E-value=0.0015  Score=53.53  Aligned_cols=93  Identities=18%  Similarity=0.197  Sum_probs=63.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc---
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG---  237 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~---  237 (347)
                      |+|+||+|.+|...++.+...|.+|++++|++++.+.   ..+. +++..+-. +. +.+.+... ++|.||.+.|.   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~-~~~~~d~~-d~-~~~~~al~-~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGV-EIIQGDLF-DP-DSVKAALK-GADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTE-EEEESCTT-CH-HHHHHHHT-TSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cccc-ccceeeeh-hh-hhhhhhhh-hcchhhhhhhhhcc
Confidence            7899999999999999999999999999999987654   1222 23322221 22 22222222 59999999983   


Q ss_pred             --hhHHHHHHhhccCC--EEEEEcccc
Q 019042          238 --KMLDAVLLNMRIHG--RIAVCGMIS  260 (347)
Q Consensus       238 --~~~~~~~~~l~~~G--~~v~~g~~~  260 (347)
                        ......++.++..|  +++.++...
T Consensus        74 ~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   74 DVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             HHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             cccccccccccccccccccceeeeccc
Confidence              24556666665554  777776644

...

>PRK06484 short chain dehydrogenase; Validated

Probab=97.52  E-value=0.0014  Score=63.29  Aligned_cols=81  Identities=22%  Similarity=0.292  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+|+++++|.+.++.+...|++|+.+.++.++.+.+.++++..   ..+|..+.+++.+.+.+...  +++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999999999999999999988876665466543   23455544344444444322  369999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.+.|.
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            998863

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.00065  Score=59.32  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+...+++   +.. .  .+|..+.+++...+.+...  +++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999998877654433232   221 1  2344444234444444321  368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.+.|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99998875

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.00085  Score=58.53  Aligned_cols=81  Identities=17%  Similarity=0.223  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCe----eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFDD----AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~----vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+|+++++|...++.+...|++|+++.+++++.+.+.+++    +...    ..|..+.+++.+.+.+...  +
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999887665443222    1111    2344444233333333321  3


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      .+|++|.++|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999999983

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.47  E-value=0.0011  Score=59.70  Aligned_cols=80  Identities=14%  Similarity=0.201  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC----eeEecCC-hhhHHHHHHHHCCC-
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD----DAFNYKK-EPDLDAALKRCFPE-  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~----~vi~~~~-~~~~~~~i~~~~~~-  226 (347)
                      .|.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++    +..    ..+|..+ ..+..+.+.+..++ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            4899999999999999999988889999999999998876654332    211    1234432 01333444444444 


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++++++|
T Consensus       132 didilVnnAG  141 (320)
T PLN02780        132 DVGVLINNVG  141 (320)
T ss_pred             CccEEEEecC
Confidence            5779999886

>PRK06196 oxidoreductase; Provisional

Probab=97.46  E-value=0.001  Score=59.80  Aligned_cols=80  Identities=16%  Similarity=0.191  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CC-eeEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG-FD-DAFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      .+.+++|+||+|++|..++..+...|++|++++++.++.+.+.+++. .. ...|..+.+++.+.+.+...  +++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            46799999999999999999999999999999999877655442332 21 12344443234444443322  3699999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      .++|
T Consensus       105 ~nAg  108 (315)
T PRK06196        105 NNAG  108 (315)
T ss_pred             ECCC
Confidence            9987

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.46  E-value=0.0026  Score=54.95  Aligned_cols=78  Identities=19%  Similarity=0.317  Sum_probs=55.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEEEEC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIYFEN  234 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~vid~  234 (347)
                      +++|+|++|++|...+..+...|++|+++++++++.+.+.+.++...   ..|..+.+++.+.+.+...  +++|+++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999999887776653455421   2344443234443433322  368999998


Q ss_pred             CCc
Q 019042          235 VGG  237 (347)
Q Consensus       235 ~g~  237 (347)
                      +|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            863

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.00077  Score=59.86  Aligned_cols=81  Identities=21%  Similarity=0.327  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      .+.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+....  -+.+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3579999999999999999999889999999999987765554232   322 1  234444323333333221  1368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.|.|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00089  Score=56.89  Aligned_cols=78  Identities=18%  Similarity=0.174  Sum_probs=55.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .+++|+|++|++|...+..+...|++|+++++++++.+.++ +++..  ...|..+.+++.+.+..+..+++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            47999999999999999999889999999999887666555 44322  2244444423444444443347999998876


Q ss_pred             c
Q 019042          237 G  237 (347)
Q Consensus       237 ~  237 (347)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            3

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00085  Score=58.13  Aligned_cols=80  Identities=21%  Similarity=0.278  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+|++|++|...++.+...|++|+++.++.++.+.+.+++   +..   ...|..+.+++.+.+.+...  +.+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999999887766554333   221   12344443234333333221  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |+++.+.|
T Consensus        88 d~lv~~ag   95 (253)
T PRK05867         88 DIAVCNAG   95 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.44  E-value=0.0024  Score=56.29  Aligned_cols=93  Identities=22%  Similarity=0.286  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|++++|+|. |.+|++++..++..|++|++..++.++.+.+. ++|... +.+.   ++.+.+.     ++|+||.|+.
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~~-~~~~---~l~~~l~-----~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLIP-FPLN---KLEEKVA-----EIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCee-ecHH---HHHHHhc-----cCCEEEECCC
Confidence            5789999995 99999999999999999999999988777666 666532 2221   3333332     4899999987


Q ss_pred             chhH-HHHHHhhccCCEEEEEcccc
Q 019042          237 GKML-DAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       237 ~~~~-~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ...+ ...++.++++..++.+++..
T Consensus       219 ~~ii~~~~l~~~k~~aliIDlas~P  243 (287)
T TIGR02853       219 ALVLTADVLSKLPKHAVIIDLASKP  243 (287)
T ss_pred             hHHhCHHHHhcCCCCeEEEEeCcCC
Confidence            5432 45667788888888888743

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.0029  Score=55.47  Aligned_cols=78  Identities=12%  Similarity=0.134  Sum_probs=52.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC----eeEecCChhhHHHHHHHHCC--CCccE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD----DAFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~----~vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      +++|+||+|++|..+++.+...|++|+++.+++++.+.+.++   .+..    ...|..+.+++.+.+.+...  +++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999999999887665443222   2332    12455554233333333221  36899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +|.+.|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999973

>PRK08017 oxidoreductase; Provisional

Probab=97.44  E-value=0.0016  Score=56.46  Aligned_cols=78  Identities=15%  Similarity=0.232  Sum_probs=56.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHH---HHHHHCCCCccEEEEC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDA---ALKRCFPEGIDIYFEN  234 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~---~i~~~~~~~~d~vid~  234 (347)
                      ++++|+|++|++|..+++.+...|++|++++++.++.+.++ +.++.. ..|..+..++.+   .+.+...+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            57999999999999999999999999999999998887777 666643 345444322222   3333333468888888


Q ss_pred             CCc
Q 019042          235 VGG  237 (347)
Q Consensus       235 ~g~  237 (347)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            763

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.44  E-value=0.0029  Score=54.92  Aligned_cols=79  Identities=24%  Similarity=0.255  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+++.+++...+... ++   +..   ...|..+.++..+.+.+...  +++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999998754322222 32   332   12455443234444443321  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |+++.++|
T Consensus        86 d~lv~nAg   93 (260)
T PRK12823         86 DVLINNVG   93 (260)
T ss_pred             eEEEECCc
Confidence            99999987

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.00097  Score=57.84  Aligned_cols=81  Identities=23%  Similarity=0.317  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-Ce--eEecCChhhHHHHHHHHC--CCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF-DD--AFNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~-~~--vi~~~~~~~~~~~i~~~~--~~~  227 (347)
                      .++++++|+|++|++|..++..+...|++|+++.++.++.+.+.+.+   +. ..  ..|..+.+++.+.+.+..  .+.
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999999999999999999988766554232   21 11  234433324444343322  136


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.+.|
T Consensus        87 ~d~li~~ag   95 (258)
T PRK06949         87 IDILVNNSG   95 (258)
T ss_pred             CCEEEECCC
Confidence            899999998

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.00092  Score=58.13  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCC---eeEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF-----GFD---DAFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      .+++++|+|++|++|...++.+...|++|+++++++++.+.+.+++     +..   ...|..+.+++...+.+...  +
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4679999999999999999999999999999999887665554333     211   12344443234333333221  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      .+|++|.+.|
T Consensus        86 ~id~li~~ag   95 (260)
T PRK07063         86 PLDVLVNNAG   95 (260)
T ss_pred             CCcEEEECCC
Confidence            6999999987

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0014  Score=58.90  Aligned_cols=80  Identities=16%  Similarity=0.163  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CC---eeEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----G-FD---DAFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g-~~---~vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      +|.+++|+||++++|..++..+...|++|++++++.++.+.+.+++    + ..   ..+|..+.++..+.+.++..  +
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999987665443232    1 11   12344443233333333221  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      .+|++|.++|
T Consensus        93 ~iD~li~nAG  102 (313)
T PRK05854         93 PIHLLINNAG  102 (313)
T ss_pred             CccEEEECCc
Confidence            6899999887

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0028  Score=55.61  Aligned_cols=80  Identities=23%  Similarity=0.241  Sum_probs=55.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      +.+++|+||+|++|...++.+...|++|++++++.++.+.+.+.++.. .  ..|..+.+++...+.+...  +++|++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            458999999999999999998888999999999988776665333321 1  2344443233333333221  3689999


Q ss_pred             ECCCc
Q 019042          233 ENVGG  237 (347)
Q Consensus       233 d~~g~  237 (347)
                      .|.|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99874

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.42  E-value=0.00077  Score=63.01  Aligned_cols=147  Identities=19%  Similarity=0.147  Sum_probs=87.5

Q ss_pred             CCCCceeeceEEEEecCCCCCCCCCCEEE-ec-----------cCcceeEeecCCCcceeccCCCCCccccccccCCchh
Q 019042           76 NPGEPLSGYGVSKVLDSTHPNYKKDDLVW-GL-----------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGL  143 (347)
Q Consensus        76 v~G~e~~g~G~v~~vG~~v~~~~vGd~V~-~~-----------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~  143 (347)
                      .-|||  .++.+..|+++..+.-+|+.=+ +-           |.......---.. .+++ |+.  +..+.+....+..
T Consensus        91 ~~g~e--a~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~-a~~~-~k~--v~~~t~i~~~~~S  164 (423)
T PRK00045         91 HEGEE--AVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK-AFSV-AKR--VRTETGIGAGAVS  164 (423)
T ss_pred             cCCHH--HHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH-HHHH-Hhh--HhhhcCCCCCCcC
Confidence            45888  4458888888888876676433 11           1110000000001 2344 444  2212222233445


Q ss_pred             hHHHHhhhhcC---CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHH
Q 019042          144 TAYGGLYELCS---PKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAA  219 (347)
Q Consensus       144 tA~~~l~~~~~---~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  219 (347)
                      .++.++.....   -.++++|+|+|+ |.+|.++++.++..|+ +|+++.++.++...+.+.+|.. ++++.   ++.+.
T Consensus       165 v~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~~~~~  239 (423)
T PRK00045        165 VASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD---ELPEA  239 (423)
T ss_pred             HHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH---HHHHH
Confidence            56666533221   257899999996 9999999999999998 8999999988866444377753 34331   33333


Q ss_pred             HHHHCCCCccEEEECCCch
Q 019042          220 LKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       220 i~~~~~~~~d~vid~~g~~  238 (347)
                      +.     ++|+||+|++..
T Consensus       240 l~-----~aDvVI~aT~s~  253 (423)
T PRK00045        240 LA-----EADIVISSTGAP  253 (423)
T ss_pred             hc-----cCCEEEECCCCC
Confidence            32     489999999874

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0024  Score=56.13  Aligned_cols=79  Identities=18%  Similarity=0.264  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCC--C-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGF--D-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~--~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +.+++|+||+|++|...+..+...|++|++++++.++.+.+.+.   .+.  . .  ..|..+..++.+ +.+...  ++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            56899999999999999999988999999999988766554322   221  1 1  234444423444 444322  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|+++.|.|.
T Consensus        82 id~vv~~ag~   91 (280)
T PRK06914         82 IDLLVNNAGY   91 (280)
T ss_pred             eeEEEECCcc
Confidence            8999999873

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.41  E-value=0.0059  Score=50.80  Aligned_cols=99  Identities=23%  Similarity=0.337  Sum_probs=68.6

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---HhC-CCeeEecCChhhHHHHHHHHCC
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKN---KFG-FDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~---~~g-~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ...+.++++|+-.|+ |. |.+++++++..+  .+|++++.+++..+.+++   .++ .+.+.....  |..+.+... .
T Consensus        35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~--d~~~~l~~~-~  109 (198)
T PRK00377         35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG--EAPEILFTI-N  109 (198)
T ss_pred             HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe--chhhhHhhc-C
Confidence            457889999999995 55 999999998764  599999999988776653   355 232221111  333333222 2


Q ss_pred             CCccEEEECCCc----hhHHHHHHhhccCCEEEE
Q 019042          226 EGIDIYFENVGG----KMLDAVLLNMRIHGRIAV  255 (347)
Q Consensus       226 ~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  255 (347)
                      +.+|.||...+.    ..+..+.+.|+++|+++.
T Consensus       110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            369999986543    367888889999999985

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.40  E-value=0.011  Score=51.52  Aligned_cols=84  Identities=20%  Similarity=0.201  Sum_probs=59.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee---EecCC-----hhhHHHHHHHHC-
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA---FNYKK-----EPDLDAALKRCF-  224 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v---i~~~~-----~~~~~~~i~~~~-  224 (347)
                      +.++.-+++|+|+++++|++.+..++..|++|+++.++.+++..+...++....   +.+..     .+...+.++++. 
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            334557999999999999999999999999999999999998888766654211   11111     111233333332 


Q ss_pred             -CCCccEEEECCCc
Q 019042          225 -PEGIDIYFENVGG  237 (347)
Q Consensus       225 -~~~~d~vid~~g~  237 (347)
                       .+.+|.+|.|+|.
T Consensus       109 ~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGV  122 (331)
T ss_pred             ccCCcceEEEecCc
Confidence             1368999999994

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0012  Score=57.52  Aligned_cols=80  Identities=16%  Similarity=0.219  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+.+   +.. .  ..|..+.+.+.+.+.+...  +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999887665544232   221 1  2444444233333333321  368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        89 d~vi~~Ag   96 (263)
T PRK07814         89 DIVVNNVG   96 (263)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0011  Score=57.39  Aligned_cols=81  Identities=23%  Similarity=0.331  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...+..+...|++|+.+++++++.+.+.+++   +.. .  ..|..+.++..+.+.+...  +.+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999999999999999888766554333   322 1  1344443233333333322  368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.++|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.39  E-value=0.0012  Score=57.00  Aligned_cols=81  Identities=22%  Similarity=0.273  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CC---eeEecCChhhHHHHHHHHC--CCCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG--FD---DAFNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g--~~---~vi~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+...+.  ..   ...|..+.+++...+.+..  .+.+|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999999999999999998899999999999877665543433  11   1234444323443333321  13689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.39  E-value=0.0018  Score=59.57  Aligned_cols=111  Identities=18%  Similarity=0.122  Sum_probs=76.5

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      |..+....+..+.+..++++|++||-+|.  |.|..+..+++..|++|++++.+++..+.+++.. ....++.... ++.
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~  223 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYR  223 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chh
Confidence            33344445555656678899999999984  6888899999988999999999999998888433 2211222222 332


Q ss_pred             HHHHHHCCCCccEEEEC-----CCc----hhHHHHHHhhccCCEEEEEc
Q 019042          218 AALKRCFPEGIDIYFEN-----VGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .    + .+.+|.|+..     +|.    ..+..+.+.|+|+|.+++..
T Consensus       224 ~----l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        224 D----L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             h----c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1    1 2468988743     332    35788888999999998754

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0035  Score=54.62  Aligned_cols=81  Identities=23%  Similarity=0.326  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCC-e--eEecCChhhHHHHHHHHC-CCCccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF--GFD-D--AFNYKKEPDLDAALKRCF-PEGIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~--vi~~~~~~~~~~~i~~~~-~~~~d~  230 (347)
                      ++.+++|+|++|++|...+..+...|++|+++++++++.+.+..++  +.. .  ..|..+.+++.+.+.... .+.+|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999999999999999999899999999999988766665333  211 1  123333312222222221 246899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      ++.++|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999874

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0016  Score=56.66  Aligned_cols=83  Identities=23%  Similarity=0.310  Sum_probs=56.3

Q ss_pred             CCCCCEEEEEcCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCCee----EecCChhhHHHHHHHHC-
Q 019042          155 PKKGEYVYVSAASG-AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK----FGFDDA----FNYKKEPDLDAALKRCF-  224 (347)
Q Consensus       155 ~~~~~~vlI~ga~g-~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~v----i~~~~~~~~~~~i~~~~-  224 (347)
                      +.++++++|+|++| ++|.++++.+...|++|+++++++++.+...+.    ++...+    .|..+.+++.+.+.+.. 
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34578999999986 899999999999999999999887765544322    343222    34444323333333321 


Q ss_pred             -CCCccEEEECCCc
Q 019042          225 -PEGIDIYFENVGG  237 (347)
Q Consensus       225 -~~~~d~vid~~g~  237 (347)
                       .+.+|++|.+.|.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence             1368999999983

>PRK06128 oxidoreductase; Provisional

Probab=97.36  E-value=0.0028  Score=56.48  Aligned_cols=104  Identities=17%  Similarity=0.220  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH--HH----HHHHHHhCCCe---eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE--KV----NLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~--~~----~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ++.++||+|++|++|...+..+...|++|+++.++.+  +.    +.++ ..|...   ..|..+.++..+.+.+...  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999988765432  11    2222 334321   1344443233333333221  


Q ss_pred             CCccEEEECCCch---------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          226 EGIDIYFENVGGK---------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       226 ~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +++|++|.+.|..                           ..+.++..++.+|+++.+++...
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~  195 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS  195 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence            3699999988731                           11334445667889998876543

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0011  Score=57.41  Aligned_cols=81  Identities=20%  Similarity=0.211  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...+..+...|++|+++++++++.+.+.+++   +..   ...|..+.+++...+.+...  +.+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            4678999999999999999999999999999999887665554333   221   23444443234333333321  358


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (258)
T PRK07890         84 DALVNNAFR   92 (258)
T ss_pred             cEEEECCcc
Confidence            999998873

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0014  Score=57.65  Aligned_cols=81  Identities=19%  Similarity=0.172  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      .+.+++|+|++|++|...++.+...|++|++++++.++.+.+.+..+..   ...|..+.+.+.+.+.+...  +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3568999999999999999999989999999999988776665232221   12344443233333333221  258999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      +.+.|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999884

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0015  Score=56.56  Aligned_cols=80  Identities=15%  Similarity=0.240  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe----eEecCChhhHHHHHHHHCC--CCccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD----AFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      ++.+++|+||+|++|...++.+...|++|+.++++.+..+... ++....    ..|..+..++.+.+.+...  +++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999999999999999999999999999998876544444 332211    2344333233333333211  36899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +|.+.|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999873

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.36  E-value=0.0041  Score=51.60  Aligned_cols=78  Identities=23%  Similarity=0.270  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----CC-eeEecCChhhHHHHHHHHCCCCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG----FD-DAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      ++.+++|.|++|++|..++..+...|++|+++.++.++.+.+.+.+.    .. ...+..+.+++.+.+.     ++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence            57899999999999999988888889999999999887766653442    21 1122322213333332     48999


Q ss_pred             EECCCchh
Q 019042          232 FENVGGKM  239 (347)
Q Consensus       232 id~~g~~~  239 (347)
                      |.++....
T Consensus       102 i~at~~g~  109 (194)
T cd01078         102 FAAGAAGV  109 (194)
T ss_pred             EECCCCCc
Confidence            99887543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0015  Score=55.78  Aligned_cols=81  Identities=11%  Similarity=0.140  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe-eEecCChhhHHHHHHHHCC--CCccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD-AFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      ++.+++|+|++|++|..+++.+.+.|++|++++++.++.....+++   +... ..|..+..++.+.+.+...  +++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            3689999999999999999999888999999999776533222122   2221 2344433233333333221  36899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +|.+.|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9998873

>PRK05717 oxidoreductase; Validated

Probab=97.33  E-value=0.0017  Score=56.22  Aligned_cols=81  Identities=17%  Similarity=0.210  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|.+++|+|++|++|...+..+...|++|+++.++.++.+.+.+.++..   ...|..+.+++.+.+.+...  +.+|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999999889999999988876555444244432   12344443233333333322  358999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.+.|.
T Consensus        89 i~~ag~   94 (255)
T PRK05717         89 VCNAAI   94 (255)
T ss_pred             EECCCc
Confidence            998873

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.32  E-value=0.0042  Score=54.02  Aligned_cols=104  Identities=11%  Similarity=0.072  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhCCCee--EecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKEK---VNLLKNKFGFDDA--FNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~~~---~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|++++|+|++  +++|.+.++.+...|++|+++.++++.   .+.+.++++....  .|..+.++..+.+.+...  +.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            47899999997  499999999999999999998887543   2333324443222  343443234443333321  36


Q ss_pred             ccEEEECCCch---------------h---------------HHHHHHhhccCCEEEEEcccc
Q 019042          228 IDIYFENVGGK---------------M---------------LDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +|+++.++|..               .               .+.++..++.+|+++.+++..
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            89999988631               0               134556677778988876543

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.0015  Score=57.46  Aligned_cols=80  Identities=20%  Similarity=0.326  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...+..+...|++|+++.++.++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  +.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999998877665443233   322 1  2344443233333333221  368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.+.|
T Consensus        85 d~li~nAg   92 (275)
T PRK05876         85 DVVFSNAG   92 (275)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.31  E-value=0.0018  Score=56.14  Aligned_cols=81  Identities=21%  Similarity=0.281  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+++.+++++.+.+.+.+   |.. .  ..|..+..++.+.+.+..  -+.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999889999999999877655443232   321 1  234444323433343322  1368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.30  E-value=0.0023  Score=55.24  Aligned_cols=80  Identities=16%  Similarity=0.263  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+|++|++|+.+++.+...|++|++++++.++.+.+.++   .+..   ...|..+.+...+.+.....  +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999988765544322   2332   12333333233333333221  368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |.+|.++|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.0023  Score=55.53  Aligned_cols=79  Identities=18%  Similarity=0.169  Sum_probs=55.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-----eeEecCChhhHHHHHHHHCC--CCccE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-----DAFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      +.+++|+|++|++|...+..+...|++|+++.++.++.+.+.+++...     ...|..+.+++.+.+.+...  +.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            358999999999999999999989999999999888776555333221     12344443244444443322  25899


Q ss_pred             EEECCC
Q 019042          231 YFENVG  236 (347)
Q Consensus       231 vid~~g  236 (347)
                      ++.++|
T Consensus        82 lv~~ag   87 (257)
T PRK07024         82 VIANAG   87 (257)
T ss_pred             EEECCC
Confidence            999887

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.30  E-value=0.0021  Score=57.88  Aligned_cols=80  Identities=14%  Similarity=0.142  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC---C-e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF---D-D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~---~-~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      .+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+++..   . .  ..|..+.+++.+.+.+..  .+.+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            467899999999999999999988999999999988876655434421   1 1  234444323333333321  2369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999987

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.29  E-value=0.0023  Score=56.67  Aligned_cols=149  Identities=17%  Similarity=0.167  Sum_probs=84.9

Q ss_pred             CCCCCCCEEEeccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHH
Q 019042           95 PNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLV  174 (347)
Q Consensus        95 ~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a  174 (347)
                      +.+++|++.+....|.++...+... .+.++|.   +.+....-+.+ ..+...+..  ...++++||-.|. |. |.++
T Consensus       104 ~p~~~g~~~~i~p~w~~~~~~~~~~-~i~ldpg---~aFgtG~h~tt-~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~la  174 (288)
T TIGR00406       104 HPVQFGKRFWICPSWRDVPSDEDAL-IIMLDPG---LAFGTGTHPTT-SLCLEWLED--LDLKDKNVIDVGC-GS-GILS  174 (288)
T ss_pred             CCEEEcCeEEEECCCcCCCCCCCcE-EEEECCC---CcccCCCCHHH-HHHHHHHHh--hcCCCCEEEEeCC-Ch-hHHH
Confidence            3477888877777776654322233 5555332   22211111111 112222322  2457899999994 44 8888


Q ss_pred             HHHHHHCCC-EEEEEeCCHHHHHHHHHHhC---CCeeEecCChhhHHHHHHHHCCCCccEEEECCCch----hHHHHHHh
Q 019042          175 GQFAKLVGC-YVVGSAGSKEKVNLLKNKFG---FDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK----MLDAVLLN  246 (347)
Q Consensus       175 ~qla~~~G~-~V~~~~~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~----~~~~~~~~  246 (347)
                      +.+++ .|+ +|++++.++...+.+++.+.   ....+..... +    ......+.+|+|+.+....    .+..+.+.
T Consensus       175 i~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDlVvan~~~~~l~~ll~~~~~~  248 (288)
T TIGR00406       175 IAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADVIVANILAEVIKELYPQFSRL  248 (288)
T ss_pred             HHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceEEEEecCHHHHHHHHHHHHHH
Confidence            77665 565 89999999987777764322   1111111111 1    1112223799999866433    55677889


Q ss_pred             hccCCEEEEEcc
Q 019042          247 MRIHGRIAVCGM  258 (347)
Q Consensus       247 l~~~G~~v~~g~  258 (347)
                      |+++|.++..|.
T Consensus       249 LkpgG~li~sgi  260 (288)
T TIGR00406       249 VKPGGWLILSGI  260 (288)
T ss_pred             cCCCcEEEEEeC
Confidence            999999998765

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.27  E-value=0.0028  Score=51.83  Aligned_cols=89  Identities=22%  Similarity=0.269  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -.|.+|.|+| .|.+|+..++.++..|++|++.+++........ ..+.    .+.   ++.+.+.+     .|+|+.+.
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~----~~~---~l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGV----EYV---SLDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTE----EES---SHHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcc-cccc----eee---ehhhhcch-----hhhhhhhh
Confidence            4689999999 599999999999999999999999887655343 4443    222   45555554     79998877


Q ss_pred             Cc-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          236 GG-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .. +     .-...+..|+++..+|.++-
T Consensus       100 plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ccccccceeeeeeeeeccccceEEEeccc
Confidence            63 2     23667789999998888764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02253 xanthoxin dehydrogenase

Probab=97.27  E-value=0.0024  Score=56.18  Aligned_cols=81  Identities=16%  Similarity=0.160  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC--C---eeEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF--D---DAFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~--~---~vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      .+.+++|+|++|++|.+.++.+...|++|++++++++..+.+.++++.  .   ...|..+.+++.+.+.+...  +++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            467999999999999999998888999999999887655544434432  1   12454444234333333222  3689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.002  Score=55.87  Aligned_cols=84  Identities=11%  Similarity=0.124  Sum_probs=54.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHH-HHHHHHHh---CC-C-ee--EecCChhhHHHHHHHHC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEK-VNLLKNKF---GF-D-DA--FNYKKEPDLDAALKRCF  224 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~-~~~~~~~~---g~-~-~v--i~~~~~~~~~~~i~~~~  224 (347)
                      .+..+.+|+|+||+|++|...++-+.+. |++|+++++++++ .+.+.+++   +. . +.  +|..+..++.+.+.+..
T Consensus         4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            3456789999999999999999877777 5899999988764 44332232   32 1 22  34444323333344333


Q ss_pred             C-CCccEEEECCCc
Q 019042          225 P-EGIDIYFENVGG  237 (347)
Q Consensus       225 ~-~~~d~vid~~g~  237 (347)
                      . +++|+++.+.|.
T Consensus        84 ~~g~id~li~~ag~   97 (253)
T PRK07904         84 AGGDVDVAIVAFGL   97 (253)
T ss_pred             hcCCCCEEEEeeec
Confidence            2 479999887764

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0019  Score=55.90  Aligned_cols=79  Identities=18%  Similarity=0.199  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-ee--EecCChhhHHHHHHHHCC--CCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-DA--FNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      |++++|+|++|++|...++.+...|++|++++++.++.+.+.+.+   +.. ..  .|..+.+++.+.+.+...  +.+|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999999999999999999999999999999887665554232   221 22  244443234443333321  3689


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.+.|
T Consensus        81 ~lI~~ag   87 (252)
T PRK07677         81 ALINNAA   87 (252)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.003  Score=53.50  Aligned_cols=78  Identities=17%  Similarity=0.164  Sum_probs=55.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      ++++|+|++|++|...++.+...|++|++++++.++.+.++ ..+.. ...|..+.+++.+.+.++..+++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            47999999999999999988888999999999888777666 55542 23455544234443333333369999998764

>PRK06194 hypothetical protein; Provisional

Probab=97.25  E-value=0.0019  Score=57.01  Aligned_cols=80  Identities=13%  Similarity=0.243  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      +.++||+||+|++|...++.+...|++|++++++.++.+...+++   +.. .  ..|..+.+++.+.+....  .+++|
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id   85 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH   85 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999889999999998876654443233   322 1  123333323333333321  13689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        86 ~vi~~Ag~   93 (287)
T PRK06194         86 LLFNNAGV   93 (287)
T ss_pred             EEEECCCC
Confidence            99999984

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0019  Score=57.73  Aligned_cols=80  Identities=20%  Similarity=0.232  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCC-e--eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF-----GFD-D--AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~--vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++     +.. .  ..|..+.++..+.+.++..  +
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            5689999999999999999988889999999999877654432222     111 1  2344443234333443322  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.++|
T Consensus        95 ~iD~li~nAg  104 (306)
T PRK06197         95 RIDLLINNAG  104 (306)
T ss_pred             CCCEEEECCc
Confidence            6899999987

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.24  E-value=0.0022  Score=55.79  Aligned_cols=78  Identities=26%  Similarity=0.271  Sum_probs=53.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe--eEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD--AFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~--vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      +++|+|+++++|...++.+...|++|+++.+++++.+.+.+++   +...  ..|..+.+++.+.+.+...  +++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899999999999999999999999999999887765554333   2212  2344443234444443322  3689999


Q ss_pred             ECCCc
Q 019042          233 ENVGG  237 (347)
Q Consensus       233 d~~g~  237 (347)
                      .+.|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            98873

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.23  E-value=0.006  Score=49.26  Aligned_cols=100  Identities=22%  Similarity=0.346  Sum_probs=69.9

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCCCCc
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      ..+++|+.++=.|+  |.|..++++++.. ..+|+++.++++..+..+.   +||.+.+.-...  +..+.+..+.  .+
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~L~~~~--~~  103 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEALPDLP--SP  103 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHhhcCCC--CC
Confidence            58889998888886  5688888998544 4599999999987766643   678764322222  3334444322  48


Q ss_pred             cEEEECCCc---hhHHHHHHhhccCCEEEEEcc
Q 019042          229 DIYFENVGG---KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       229 d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |.+|=.-|.   ..++.++..|+++|++|.-..
T Consensus       104 daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         104 DAIFIGGGGNIEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             CEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence            998855543   378999999999999986543

>PRK08589 short chain dehydrogenase; Validated

Probab=97.23  E-value=0.0023  Score=56.16  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+|+++++|...++.+...|++|+++.++ ++.+.+.+++   +..   ...|..+..+....+.+...  +.+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            46799999999999999999998999999999988 4433332233   321   23444443233333333321  368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.22  E-value=0.0058  Score=53.12  Aligned_cols=105  Identities=11%  Similarity=0.068  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh-CCC---eeEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS---KEKVNLLKNKF-GFD---DAFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~---~~~~~~~~~~~-g~~---~vi~~~~~~~~~~~i~~~~~--  225 (347)
                      .+++++|+|++  +++|.++++.+...|++|+.+.++   .++.+.+.+++ +..   ...|..+.++..+.+.+...  
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            46899999986  799999999999999999988654   23444444344 221   12344444244444444332  


Q ss_pred             CCccEEEECCCch---------------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          226 EGIDIYFENVGGK---------------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       226 ~~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +.+|+++.+.|..               .               .+.++..++++|+++.+++..+
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  151 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG  151 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence            4689999887621               0               1234455667899998876543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.22  E-value=0.0023  Score=55.15  Aligned_cols=80  Identities=20%  Similarity=0.250  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK--VNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~--~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++++++|+|++|++|...+..+...|++|++++++...  .+.++ +.+..   ...|..+.+++...+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999986521  22233 44432   12344444244444443321  3689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99998873

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK09242 tropinone reductase; Provisional

Probab=97.22  E-value=0.0022  Score=55.59  Aligned_cols=81  Identities=20%  Similarity=0.279  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCC-e--eEecCChhhHHHHHHHHC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF-----GFD-D--AFNYKKEPDLDAALKRCF--PE  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~--vi~~~~~~~~~~~i~~~~--~~  226 (347)
                      ++++++|+|++|++|...++.+...|++|++++++.++.+.+.+++     +.. .  ..|..+.+++...+.+..  -+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999887765554332     221 1  234444323333333322  13


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            69999999974

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.21  E-value=0.0019  Score=55.89  Aligned_cols=79  Identities=22%  Similarity=0.296  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhCC--CeeEecCChhhHHHHHHHHCCC--Cc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE----KVNLLKNKFGF--DDAFNYKKEPDLDAALKRCFPE--GI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~----~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~~--~~  228 (347)
                      +|+.|||+||++|+|.+.++=...+|++++..+.+.+    ..+.++ +.|-  ..+.|.++.++..+...+...+  .+
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            5899999999999999888888889998877776544    333444 3342  2455555543444444433332  69


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++++++|
T Consensus       116 ~ILVNNAG  123 (300)
T KOG1201|consen  116 DILVNNAG  123 (300)
T ss_pred             eEEEeccc
Confidence            99999998

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.21  E-value=0.0036  Score=54.28  Aligned_cols=99  Identities=20%  Similarity=0.227  Sum_probs=74.3

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ++.++ +|.|+|+ |-+|.-++.+|.-+|++|+..+.+.+|+..+.+.|+..--.-+++..++.+.+.+     .|++|.
T Consensus       165 GV~~~-kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~-----aDlvIg  237 (371)
T COG0686         165 GVLPA-KVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKK-----ADLVIG  237 (371)
T ss_pred             CCCCc-cEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhh-----ccEEEE
Confidence            34455 5677775 9999999999999999999999999999999866766522224444355555543     899987


Q ss_pred             CC---Cch----hHHHHHHhhccCCEEEEEccc
Q 019042          234 NV---GGK----MLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       234 ~~---g~~----~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      ++   |.+    ..++.++.|++++.+|.+..-
T Consensus       238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAiD  270 (371)
T COG0686         238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAID  270 (371)
T ss_pred             EEEecCCCCceehhHHHHHhcCCCcEEEEEEEc
Confidence            65   222    567789999999999988753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.21  E-value=0.0028  Score=55.02  Aligned_cols=80  Identities=20%  Similarity=0.313  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      .+.+++|+|++|++|...++.+...|++|++++++.++.+.+.++++.. .  ..|..+.++..+.+.+...  +.+|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999999999999999999999999999999988776665444432 1  2333343234343333221  368999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +.+.|
T Consensus        85 i~~ag   89 (257)
T PRK07067         85 FNNAA   89 (257)
T ss_pred             EECCC
Confidence            99886

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0025  Score=54.88  Aligned_cols=79  Identities=16%  Similarity=0.235  Sum_probs=54.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF-----GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +.+++|+|++|++|...++.+...|++|+++++++++.+.+.+.+     +.. +  ..|..+.+++.+.+.+...  ++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999888888999999999887765554222     211 1  2344444244444443322  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.+.|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK08643 acetoin reductase; Validated

Probab=97.21  E-value=0.0021  Score=55.68  Aligned_cols=80  Identities=15%  Similarity=0.155  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +++++|+|++|++|...++.+...|++|++++++.++.+.+...+   +..   ...|..+.+.+.+.+.+...  +++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            568999999999999999999999999999999877655443232   221   12344443233343433321  3689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999863

>PRK07985 oxidoreductase; Provisional

Probab=97.20  E-value=0.0048  Score=54.81  Aligned_cols=105  Identities=15%  Similarity=0.104  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHH---HhCCC---eeEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--EKVNLLKN---KFGFD---DAFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~--~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++.+++|+||+|++|.+.++.+...|++|+++.++.  ++.+.+.+   ..+..   ...|..+.+++.+.+.+...  +
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            567999999999999999999999999999876542  22333321   22322   12344443234444443322  3


Q ss_pred             CccEEEECCCch---------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK---------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ++|+++.+.|..                           .++.++..++.+|++|.+++...
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~  189 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence            689999887631                           11334445667899998876543

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0032  Score=53.45  Aligned_cols=76  Identities=12%  Similarity=0.138  Sum_probs=54.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +++|+|++|++|...++.+...|++|+.+.++.++.+.+.++++... ..|..+.+++.+.+.+.. +.+|+++.+.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            58999999999999999999899999999999887766553555432 245555424444444332 25899998865

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0027  Score=55.72  Aligned_cols=79  Identities=19%  Similarity=0.285  Sum_probs=55.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      .++||+|++|++|...++.+...|.+|+++.++.++.+.+++..+..   ...|..+.+.+.+.+.+...  +++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47999999999999999998889999999999988777665333322   12444443234444433221  36899999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      ++|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9873

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.20  E-value=0.0031  Score=54.81  Aligned_cols=80  Identities=21%  Similarity=0.299  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCC---CeeEecCChhh-HHHHHHHHCCC-C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK----FGF---DDAFNYKKEPD-LDAALKRCFPE-G  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~----~g~---~~vi~~~~~~~-~~~~i~~~~~~-~  227 (347)
                      .|++.+|+||+.|+|.+-+.=+.+.|.+|+.+.|+.+|++.+.++    .++   ..++|+.+. + .-+.+++.+.+ .
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~-~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKG-DEVYEKLLEKLAGLD  126 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCC-chhHHHHHHHhcCCc
Confidence            478999999999999776665555999999999999998777543    343   246788775 4 23444444444 7


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +-+.++|+|-
T Consensus       127 VgILVNNvG~  136 (312)
T KOG1014|consen  127 VGILVNNVGM  136 (312)
T ss_pred             eEEEEecccc
Confidence            8889999984

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.19  E-value=0.00093  Score=58.40  Aligned_cols=102  Identities=23%  Similarity=0.267  Sum_probs=62.3

Q ss_pred             HHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHH
Q 019042          147 GGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRC  223 (347)
Q Consensus       147 ~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~  223 (347)
                      ..+.+.+++++|++||-+|  .|.|-.++.+|+..|++|++++.+++..+.+++.   .|....+...-. |+.    ++
T Consensus        52 ~~~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~~----~~  124 (273)
T PF02353_consen   52 DLLCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DYR----DL  124 (273)
T ss_dssp             HHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--GG----G-
T ss_pred             HHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ecc----cc
Confidence            3445668999999999999  4589999999999999999999999988877643   343211111111 221    11


Q ss_pred             CCCCccEEEE-----CCCch----hHHHHHHhhccCCEEEEE
Q 019042          224 FPEGIDIYFE-----NVGGK----MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       224 ~~~~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~  256 (347)
                      . +.+|.|+.     ..|.+    .+..+.+.|+|+|+++.-
T Consensus       125 ~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  125 P-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             ---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             C-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            1 15888754     44432    578888899999999753

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.19  E-value=0.0028  Score=55.01  Aligned_cols=81  Identities=23%  Similarity=0.324  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+.++++.++.+.+.+.+   +..   ...|..+.+++.+.+.+...  +.+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999887765554232   221   12344443234333333221  358


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.17  E-value=0.0033  Score=55.16  Aligned_cols=80  Identities=13%  Similarity=0.155  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKEK---VNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~~---~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+|+++  ++|.+.++.+...|++|+++.+++..   .+.+.+++|...  ..|..+.++..+.+.+...  +.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            468999999986  99999999999999999998876532   222222445322  2344444244444443322  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++++++|
T Consensus        86 iD~lVnnAG   94 (271)
T PRK06505         86 LDFVVHAIG   94 (271)
T ss_pred             CCEEEECCc
Confidence            999999987

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.0028  Score=54.83  Aligned_cols=81  Identities=16%  Similarity=0.204  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+   +.+.. .  ..|..+.+++...+.+...  +.+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999888899999999998876544332   23322 1  2334333233333333211  368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.005  Score=52.73  Aligned_cols=81  Identities=19%  Similarity=0.258  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-C---eeEecCC--hhh---HHHHHHHHC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF-D---DAFNYKK--EPD---LDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~-~---~vi~~~~--~~~---~~~~i~~~~  224 (347)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+++   +. .   ..+|..+  ..+   +.+.+....
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999988766554332   21 1   1133321  102   223343333


Q ss_pred             CCCccEEEECCCc
Q 019042          225 PEGIDIYFENVGG  237 (347)
Q Consensus       225 ~~~~d~vid~~g~  237 (347)
                      .+.+|++|.++|.
T Consensus        85 ~~~id~vi~~ag~   97 (239)
T PRK08703         85 QGKLDGIVHCAGY   97 (239)
T ss_pred             CCCCCEEEEeccc
Confidence            2468999999883

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.003  Score=54.58  Aligned_cols=80  Identities=19%  Similarity=0.291  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+.++++.++.+.+.+++   +.. .  ..|..+..+....+.+...  +.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999999999999999877655544332   221 1  1244333233333333221  258


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |+++.+.|
T Consensus        87 d~li~~ag   94 (252)
T PRK07035         87 DILVNNAA   94 (252)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.0029  Score=53.88  Aligned_cols=80  Identities=9%  Similarity=0.145  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHH---CCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRC---FPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~---~~~~  227 (347)
                      ++.+++|+|+++++|.+.+..+...|++|+++.++.++++.+.++   .+.. .  ..|..+.+++.+.+.+.   .++.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999999988876554322   2432 1  23333332333333332   2226


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.+.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0033  Score=54.23  Aligned_cols=80  Identities=19%  Similarity=0.211  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+++.++++..+.+.+.+   +..   ...|..+..++...+.+...  +++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999889999999999876554443232   221   12344433223332222211  258


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.+.|
T Consensus        85 d~vi~~ag   92 (250)
T PRK07774         85 DYLVNNAA   92 (250)
T ss_pred             CEEEECCC
Confidence            99999888

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.14  E-value=0.0034  Score=53.72  Aligned_cols=79  Identities=13%  Similarity=0.145  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhCCCe-eEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV-NLLKNKFGFDD-AFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~-~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      +.+++|+|++|++|...++.+...|++|+++++++++. +.++ ..+... ..|..+.++..+.+.+...  +++|+++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            46899999999999999999999999999999876532 3333 445421 2344443244444443322  35899999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      +.|.
T Consensus        81 ~ag~   84 (236)
T PRK06483         81 NASD   84 (236)
T ss_pred             CCcc
Confidence            8873

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0027  Score=54.83  Aligned_cols=81  Identities=17%  Similarity=0.185  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCC-ee--EecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF--GFD-DA--FNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~v--i~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++.+++|+|++|++|...++.+...|++|+.++++.++.+...+.+  +.. ..  .|..+.+++.+.+.+...  +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999999988888999999999887655444233  221 12  344443233333333321  3689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      +++.+.|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999883

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0045  Score=53.76  Aligned_cols=79  Identities=22%  Similarity=0.343  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC-e--eEecCChhhHHHHHHHHCCCCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD-D--AFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ++.+++|+|+++++|...++.+...|++|++++++.++.+.+.+++    +.. .  ..|..+.+++.+.+...  +.+|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence            4689999999999999999999999999999999887765544233    221 1  23433432333333322  3699


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        84 ~lv~~ag~   91 (259)
T PRK06125         84 ILVNNAGA   91 (259)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.13  E-value=0.0057  Score=53.18  Aligned_cols=104  Identities=13%  Similarity=0.092  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCC------HHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCC-
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS------KEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFP-  225 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~------~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~-  225 (347)
                      ++++++|+|++  +++|.+.++.+...|++|+.+.++      ++..+.+.++.+..  ...|..+.++..+.+.+... 
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            46899999985  799999999999999999887543      22233333121211  12344444244434433322 


Q ss_pred             -CCccEEEECCCch-------h-----------------------HHHHHHhhccCCEEEEEcccc
Q 019042          226 -EGIDIYFENVGGK-------M-----------------------LDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       226 -~~~d~vid~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~  260 (347)
                       +.+|+++.+.|..       .                       .+.++..++.+|+++.+++..
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence             3699999988731       0                       134556677789998887643

>PRK06720 hypothetical protein; Provisional

Probab=97.12  E-value=0.0042  Score=50.21  Aligned_cols=80  Identities=18%  Similarity=0.268  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      ++.+++|+|+++++|...+..+...|++|+++.++.+..+.+.+++   +.. .  ..|..+..++.+.+.+..  -+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4779999999999999999988889999999998876554332232   432 1  233333223333332221  1368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |+++.+.|
T Consensus        95 DilVnnAG  102 (169)
T PRK06720         95 DMLFQNAG  102 (169)
T ss_pred             CEEEECCC
Confidence            99998887

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0016  Score=57.03  Aligned_cols=77  Identities=18%  Similarity=0.338  Sum_probs=54.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid~  234 (347)
                      +.+++|+|++|++|...++.+...|++|++++++.++.+...   +.. ...|..+.+++.+.+.+...  +.+|++|.+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            568999999999999999999899999999998876543221   222 23455554344444444322  368999999


Q ss_pred             CCc
Q 019042          235 VGG  237 (347)
Q Consensus       235 ~g~  237 (347)
                      .|.
T Consensus        81 ag~   83 (270)
T PRK06179         81 AGV   83 (270)
T ss_pred             CCC
Confidence            984

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.11  E-value=0.0031  Score=53.99  Aligned_cols=81  Identities=20%  Similarity=0.258  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...+..+...|++|+++++++++.+.+.+++   +.. .  ..|..+.+++.+.+++...  +++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            3578999999999999999988889999999999877654433222   221 1  2233333234444443321  268


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999998874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.11  E-value=0.0037  Score=54.13  Aligned_cols=79  Identities=18%  Similarity=0.286  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK--VNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~--~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++++++|+|+++++|.+.++.+...|++|+++.++...  .+.++ ..+..   ...|..+.+++.+.+.+...  +++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999988765432  22233 44432   12454444344444443321  3689


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      +++.+.|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9999987

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0044  Score=54.40  Aligned_cols=80  Identities=11%  Similarity=0.080  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CC-ee--EecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG-----FD-DA--FNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~-~v--i~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++.+++|+|++|++|...++.+.+.|++|+.++++.++.+...+++.     .. .+  .|..+.+++.+.+.+...  +
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36799999999999999999999999999999998776544432321     11 12  243333234344443322  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.+.|
T Consensus        86 ~~d~li~~ag   95 (276)
T PRK05875         86 RLHGVVHCAG   95 (276)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0033  Score=54.67  Aligned_cols=80  Identities=20%  Similarity=0.303  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+   +..   ...|..+...+...+.+...  +++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357999999999999999999999999999999877655443222   322   12344343233333333321  2589


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.|.|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.11  E-value=0.0032  Score=54.55  Aligned_cols=103  Identities=12%  Similarity=0.044  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC----eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD----DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+||+  +++|.+.++.+...|++|+++.++++..+.++ ++...    ...|..+.++..+.+.+...  +.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999998  79999999999999999999988743333333 33221    12344443233333333321  369


Q ss_pred             cEEEECCCch------------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          229 DIYFENVGGK------------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       229 d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      |+++.+.|..                              ..+.++..++.+|+++.+++..
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~  146 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG  146 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence            9999988731                              0133445566779988887644

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0041  Score=53.31  Aligned_cols=81  Identities=14%  Similarity=0.207  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|..++..+...|.+|+++++++++.+.+.+.+   +.. .  ..|..+.+++.+.+.+...  +.+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999887665554222   221 1  2344443233333333221  258


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |+++.+.|.
T Consensus        85 d~lv~~ag~   93 (241)
T PRK07454         85 DVLINNAGM   93 (241)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.10  E-value=0.0035  Score=54.28  Aligned_cols=81  Identities=20%  Similarity=0.346  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      .+.++||+||+|++|...++.+...|++|+.+.+++++.+.+.+++   +.. .  ..|..+.+++.+.+.++..  +.+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999999999877655443233   221 1  1344443233333333221  368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |+++.+.|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0082  Score=51.51  Aligned_cols=104  Identities=16%  Similarity=0.116  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHH---HhCCC-ee--EecCChhhHHHHHHHHC--CCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKN---KFGFD-DA--FNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~---~~g~~-~v--i~~~~~~~~~~~i~~~~--~~~  227 (347)
                      ++.+++|+|++|++|...++.+...|++|+.+.++.. +.+.+.+   ..+.. ..  .|..+.+++.+.+.+..  .++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999888776432 2222221   23321 11  23333323333333321  136


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +|++|.+.|..                          .++.+++.++..|+++.+++..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  142 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV  142 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence            89999988731                          0223444556678999887643

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.09  E-value=0.0031  Score=55.13  Aligned_cols=82  Identities=23%  Similarity=0.349  Sum_probs=57.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---CC------eeEecCChhhHHHH---HHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG---FD------DAFNYKKEPDLDAA---LKRC  223 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g---~~------~vi~~~~~~~~~~~---i~~~  223 (347)
                      -+|.+++|+|+++|+|.+.+..+...|++|+.+.++.++.+...+++.   ..      .+.|..+.++..+.   ..+.
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999988766653332   11      22344333132222   2233


Q ss_pred             CCCCccEEEECCCc
Q 019042          224 FPEGIDIYFENVGG  237 (347)
Q Consensus       224 ~~~~~d~vid~~g~  237 (347)
                      +.|++|+++++.|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence            33579999998874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.09  E-value=0.0044  Score=53.94  Aligned_cols=80  Identities=13%  Similarity=0.197  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKE---KVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|++++|+|+++  ++|.+.++.+...|++|+.+.+++.   ..+.+.++.|...  ..|..+.++..+.+.+...  +.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999986  8999999888889999998887642   2233332334322  2455554344444443322  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|+++.+.|
T Consensus        87 iDilVnnag   95 (260)
T PRK06603         87 FDFLLHGMA   95 (260)
T ss_pred             ccEEEEccc
Confidence            999999876

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0029  Score=54.88  Aligned_cols=79  Identities=15%  Similarity=0.159  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+..+ ++   +..   ...|..+.+++.+.+.+...  +++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH-HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999889999999998877654333 32   322   12344443234443443322  368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.+.|
T Consensus        85 d~vi~~ag   92 (258)
T PRK08628         85 DGLVNNAG   92 (258)
T ss_pred             CEEEECCc
Confidence            99999998

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.08  E-value=0.0047  Score=52.99  Aligned_cols=81  Identities=25%  Similarity=0.354  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++.+++|+|++|++|..+++.+...|+.|+...++.++.+.+...++.. .  ..|..+.+.+.+.+.+...  +++|.+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4679999999999999999999889999998888877766554344432 1  2333333233333332221  368999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.+.|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999873

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.07  E-value=0.0051  Score=53.25  Aligned_cols=80  Identities=23%  Similarity=0.306  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++.+.+.+...  +++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3579999999999999999988889999999999887655443232   322   12344443233333333321  268


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.+++
T Consensus        83 d~vi~~a~   90 (258)
T PRK12429         83 DILVNNAG   90 (258)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.06  E-value=0.0059  Score=52.51  Aligned_cols=81  Identities=25%  Similarity=0.328  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHH-HHHHH--HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKV-NLLKN--KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~-~~~~~--~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|++|++|...++.+...|++|++... +..+. +.+.+  ..+...   ..|..+.+++.+.+.+...  ++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999999999887543 33322 22220  234322   1344443233333333221  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|+++.+.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999974

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.06  E-value=0.0051  Score=52.70  Aligned_cols=80  Identities=23%  Similarity=0.302  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe-e--EecCChhhHHHHHHHHCC--CCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD-A--FNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +.+++|+|++|++|...++.+...|.+|+++.+++++.+.+.+.   .+... .  .|..+...+.+.+.+...  +.+|
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD   84 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            56899999999999999999988999999999988765544322   33321 1  344443234343433221  2589


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      .++.+.|.
T Consensus        85 ~vi~~ag~   92 (246)
T PRK05653         85 ILVNNAGI   92 (246)
T ss_pred             EEEECCCc
Confidence            99999864

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0053  Score=53.16  Aligned_cols=75  Identities=15%  Similarity=0.259  Sum_probs=52.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHCCCCccEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +.+++|+|++|++|..+++.+...|++|+++++++.+.+.+++.   .+..   ...|..+.    ..+.....+++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence            45899999999999999999999999999999987765554422   2221   12344443    22333323369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+.|
T Consensus        78 i~~ag   82 (257)
T PRK09291         78 LNNAG   82 (257)
T ss_pred             EECCC
Confidence            99987

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.05  E-value=0.0046  Score=54.26  Aligned_cols=82  Identities=12%  Similarity=0.174  Sum_probs=54.1

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCC--
Q 019042          155 PKKGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---EKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       155 ~~~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~---~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--  225 (347)
                      .-.+++++|+|++  +++|.+.++.+...|++|+.+.+++   ++.+.+.++++..  ...|..+.++..+.+.++..  
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            3357899999986  7999999999999999999887653   3344443345532  22344443244444443322  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +.+|+++.++|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            36899999886

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0059  Score=52.91  Aligned_cols=80  Identities=20%  Similarity=0.252  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC--e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD--D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +.+++|+|++|++|...+..+...|++|++++++.++.+.+.+.+...  +  ..|..+.+++.+.+.+...  +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999988889999999999887766554343211  1  2344443233333433321  358999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      +.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999974

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.03  E-value=0.0051  Score=54.07  Aligned_cols=80  Identities=18%  Similarity=0.243  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...++.+...|++|+++.++.++.+.+.+++   +.. .  ..|..+..++...+.+...  +++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999876654443232   322 1  2333333233333333221  368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.03  E-value=0.0011  Score=62.62  Aligned_cols=95  Identities=18%  Similarity=0.189  Sum_probs=65.1

Q ss_pred             hcCCCCCCEEE----EEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCC
Q 019042          152 LCSPKKGEYVY----VSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       152 ~~~~~~~~~vl----I~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      +.+.++|+.++    |+|++|++|.+++|+++..|++|+++.+...+....+ ..+.. .++|.+.. .+.+.+...+  
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~--  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY--  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH--
Confidence            45777888888    8998999999999999999999999887665433222 23333 35555443 3333333221  


Q ss_pred             CccEEEECCCchhHHHHHHhhccCCEEEEEccccc
Q 019042          227 GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                                 ..+..+++.|.++|+++.++....
T Consensus       104 -----------~~~~~~l~~l~~~griv~i~s~~~  127 (450)
T PRK08261        104 -----------EFFHPVLRSLAPCGRVVVLGRPPE  127 (450)
T ss_pred             -----------HHHHHHHHhccCCCEEEEEccccc
Confidence                       345667788888899998877543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.03  E-value=0.0043  Score=53.87  Aligned_cols=81  Identities=19%  Similarity=0.259  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe---eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD---AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      ++.++||+|++|++|...++.+...|++|+++.+++++.+.+.++   .+...   ..|..+.+.+.+.+.+..  .+.+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            467999999999999999999999999999999988655444323   34321   124444323333333221  1358


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.|.|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999998873

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.02  E-value=0.0062  Score=54.67  Aligned_cols=79  Identities=14%  Similarity=0.156  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCC--C--e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGF--D--D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~--~--~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      +.+++|+|+++++|...++.+...| ++|++++++.++.+.+.++++.  .  .  ..|..+.+++.+.+.++.  .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999998888899 8999999988876655435432  1  1  134444323333333332  2369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        83 D~lI~nAG   90 (314)
T TIGR01289        83 DALVCNAA   90 (314)
T ss_pred             CEEEECCC
Confidence            99999887

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.01  E-value=0.0081  Score=53.97  Aligned_cols=94  Identities=17%  Similarity=0.204  Sum_probs=61.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-EecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-FNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      +|+|+||+|-+|...+..+...|.+|++++++.++...+. ..+...+ .|..+.+++.+.+.     ++|+||.+++..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al~-----g~d~Vi~~~~~~   75 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSFK-----GVTAIIDASTSR   75 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHHC-----CCCEEEECCCCC
Confidence            6999999999999999999889999999999877655554 4454322 23333212333222     489999987531


Q ss_pred             -----h--------HHHHHHhhccCC--EEEEEccc
Q 019042          239 -----M--------LDAVLLNMRIHG--RIAVCGMI  259 (347)
Q Consensus       239 -----~--------~~~~~~~l~~~G--~~v~~g~~  259 (347)
                           .        ....++.++..|  +++.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                 0        123444444444  78877663

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.99  E-value=0.0087  Score=54.50  Aligned_cols=94  Identities=18%  Similarity=0.100  Sum_probs=66.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhC---C-CeeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFG---F-DDAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g---~-~~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      .+|+|+|+ |++|+.+++.+.+.| .+|++.+++.++.+.+. ...   . ...+|..+.+.+.+.+.     ++|+||+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn   74 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN   74 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence            47999996 999999999999888 69999999999888886 442   2 23456554323333333     2699999


Q ss_pred             CCCchhHHHHH-HhhccCCEEEEEccc
Q 019042          234 NVGGKMLDAVL-LNMRIHGRIAVCGMI  259 (347)
Q Consensus       234 ~~g~~~~~~~~-~~l~~~G~~v~~g~~  259 (347)
                      |.....-..++ .|++.+=.++.+...
T Consensus        75 ~~p~~~~~~i~ka~i~~gv~yvDts~~  101 (389)
T COG1748          75 AAPPFVDLTILKACIKTGVDYVDTSYY  101 (389)
T ss_pred             eCCchhhHHHHHHHHHhCCCEEEcccC
Confidence            99875333444 566666677766553

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.99  E-value=0.012  Score=52.74  Aligned_cols=100  Identities=20%  Similarity=0.261  Sum_probs=69.4

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....++++++||..|+  |.|..++.+++..+.  +|++++.+++..+.+++   ..|.+.+.....  |..+.+...  
T Consensus        74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~~--  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPEF--  147 (322)
T ss_pred             HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhccccc--
Confidence            3457889999999994  469999999998764  79999999887666653   345544322222  332222111  


Q ss_pred             CCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          226 EGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       226 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      +.+|+|+.+.+. .......+.|+++|+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            269999998775 3556778899999998764

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=96.99  E-value=0.0065  Score=49.15  Aligned_cols=80  Identities=15%  Similarity=0.177  Sum_probs=55.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC--Ce---eEecCChhhHHHHHHHHCC--CCccE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF--DD---AFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~---vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      ...++|+|+++++|.+..|.+...|++|.+.+.+.+..+.....+|.  +|   -.|.++..+....+++...  +.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            45789999999999999999999999999998776654444336665  32   2333443244444444322  37899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +++|.|-
T Consensus        94 lVncAGI  100 (256)
T KOG1200|consen   94 LVNCAGI  100 (256)
T ss_pred             EEEcCcc
Confidence            9999993

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.99  E-value=0.012  Score=51.02  Aligned_cols=101  Identities=15%  Similarity=0.110  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hCCC-eeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK-FGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~-~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++.++.++....... .++. ...|..+.   ...+.+....++|+||.+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~   92 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICA   92 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEEC
Confidence            357899999999999999998888899999999888765433211 1121 12343331   122222221258999988


Q ss_pred             CCch--------------hHHHHHHhhccC--CEEEEEcccc
Q 019042          235 VGGK--------------MLDAVLLNMRIH--GRIAVCGMIS  260 (347)
Q Consensus       235 ~g~~--------------~~~~~~~~l~~~--G~~v~~g~~~  260 (347)
                      .|..              .....++.++..  +++|.+++..
T Consensus        93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~  134 (251)
T PLN00141         93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL  134 (251)
T ss_pred             CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence            7641              123344444433  6888877643

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.99  E-value=0.004  Score=54.04  Aligned_cols=79  Identities=18%  Similarity=0.229  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.++||+||+|++|...++.+...|++|++++++ ++.+.+.+   +.+..   ...|..+.++....+.+...  +.+
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999877 33333321   23332   12344443233333333321  368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.+.|
T Consensus        93 d~li~~ag  100 (258)
T PRK06935         93 DILVNNAG  100 (258)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07069 short chain dehydrogenase; Validated

Probab=96.99  E-value=0.01  Score=51.06  Aligned_cols=76  Identities=16%  Similarity=0.295  Sum_probs=51.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHh----CCC----eeEecCChhhHHHHHHHHCC--CCcc
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKNKF----GFD----DAFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~~~----g~~----~vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++|+|++|++|...++.+...|++|+++.++ .++.+.+.+.+    +..    ...|..+.+.+.+.+.+...  +++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999998899999999987 55554443233    211    12344444244444433322  3689


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      +++.+.|
T Consensus        82 ~vi~~ag   88 (251)
T PRK07069         82 VLVNNAG   88 (251)
T ss_pred             EEEECCC
Confidence            9999987

>PRK04148 hypothetical protein; Provisional

Probab=96.98  E-value=0.0084  Score=45.97  Aligned_cols=86  Identities=14%  Similarity=0.093  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecC-ChhhHHHHHHHHCCCCccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYK-KEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~-~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      .++.++++.|. | .|...+..+...|.+|++++.+++..+.++ +.+...+.+.- +. ++  .+-    +++|++...
T Consensus        15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~y----~~a~liysi   84 (134)
T PRK04148         15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EIY----KNAKLIYSI   84 (134)
T ss_pred             ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HHH----hcCCEEEEe
Confidence            45678999995 6 887566666678999999999999888888 66664332210 11 11  111    147888877


Q ss_pred             CCch-hHHHHHHhhccCC
Q 019042          235 VGGK-MLDAVLLNMRIHG  251 (347)
Q Consensus       235 ~g~~-~~~~~~~~l~~~G  251 (347)
                      -... .....+++.+.-|
T Consensus        85 rpp~el~~~~~~la~~~~  102 (134)
T PRK04148         85 RPPRDLQPFILELAKKIN  102 (134)
T ss_pred             CCCHHHHHHHHHHHHHcC
Confidence            7653 4344444444433

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0052  Score=54.33  Aligned_cols=82  Identities=17%  Similarity=0.194  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH---------HHHHHHHHHh---CCCe---eEecCChhhHHHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---------EKVNLLKNKF---GFDD---AFNYKKEPDLDAAL  220 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~---------~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i  220 (347)
                      -++.+++|+|+++++|...++.+...|++|++++++.         ++.+.+.+++   +...   ..|..+.++..+.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            3578999999999999999999999999999887654         3333332233   3221   13444432444444


Q ss_pred             HHHCC--CCccEEEECCCc
Q 019042          221 KRCFP--EGIDIYFENVGG  237 (347)
Q Consensus       221 ~~~~~--~~~d~vid~~g~  237 (347)
                      .+...  +.+|++|.+.|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence            43321  369999999873

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.97  E-value=0.017  Score=48.35  Aligned_cols=103  Identities=17%  Similarity=0.184  Sum_probs=74.2

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---HhCCCeeEe-cCChhhHHHHHHHHCC
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKN---KFGFDDAFN-YKKEPDLDAALKRCFP  225 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~---~~g~~~vi~-~~~~~~~~~~i~~~~~  225 (347)
                      ........+||=+|  +++|..++.+|..+.  .+++.+..++++.+.+++   +.|.+..+. .... |..+.+.+...
T Consensus        54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~~  130 (219)
T COG4122          54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLLD  130 (219)
T ss_pred             HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhccC
Confidence            35666778899888  689999999999886  489999999998887774   346544222 2212 55666665434


Q ss_pred             CCccEEE-ECCCc---hhHHHHHHhhccCCEEEEEc
Q 019042          226 EGIDIYF-ENVGG---KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       226 ~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +.||+|| |+.-.   ..+..++++|++||.++.=.
T Consensus       131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         131 GSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            5799985 44433   37899999999999988543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.97  E-value=0.0058  Score=52.90  Aligned_cols=81  Identities=21%  Similarity=0.251  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...+..+...|++|+++.+++++.+.+.++   .+..   ...|..+..++...+.+...  +.+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999998888999999999987765444322   2321   12344443234433333321  368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |.+|.+.|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.011  Score=50.60  Aligned_cols=80  Identities=25%  Similarity=0.332  Sum_probs=51.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +.+++|+|++|++|...+..+...|++|+++ .++.++.+.+.+.+   +.. .  ..|..+.+++.+.+.+...  +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999998888889999998 88776654443232   221 1  1344443233333332211  258


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.0062  Score=52.77  Aligned_cols=80  Identities=14%  Similarity=0.166  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      .+.+++|+|++|++|...++.+...|++|+++.++. +..+.++ ..+.. ...|..+.+++.+.+.+...  +++|++|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            467999999999999999999999999998876543 3334444 33332 22344444244444443321  3689999


Q ss_pred             ECCCc
Q 019042          233 ENVGG  237 (347)
Q Consensus       233 d~~g~  237 (347)
                      .|.|.
T Consensus        85 ~~ag~   89 (255)
T PRK06463         85 NNAGI   89 (255)
T ss_pred             ECCCc
Confidence            98873

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.96  E-value=0.0054  Score=52.81  Aligned_cols=81  Identities=19%  Similarity=0.201  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC-ee--EecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD-DA--FNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~v--i~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      .+.+++|+||+|++|...+..+...|++|++++++.++...+.+.   .+.. ..  .|..+.+++.+.+.+...  +.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999998888899999999986654433212   2221 11  234343234443333321  258


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |.+|.+.|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999998864

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.014  Score=50.39  Aligned_cols=105  Identities=20%  Similarity=0.212  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHh---CCC-e--eEecCChhhHH---HHHHH----
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKNKF---GFD-D--AFNYKKEPDLD---AALKR----  222 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~---~~i~~----  222 (347)
                      ++.+++|+|++|++|.++++.+...|++|+++. ++.++.+.+.+++   +.. .  ..|..+.++..   +.+.+    
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            467999999999999999999999999998864 4444433322122   221 1  12332221222   22222    


Q ss_pred             HCC-CCccEEEECCCch-----------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          223 CFP-EGIDIYFENVGGK-----------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       223 ~~~-~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ..+ +++|+++.++|..           .               .+.++..++..|++|.+++...
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence            112 2699999988721           0               1235556667799999887543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.95  E-value=0.0052  Score=53.36  Aligned_cols=81  Identities=16%  Similarity=0.215  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSK--EKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga--~g~vG~~a~qla~~~G~~V~~~~~~~--~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      .+++++|+|+  ++++|.+.++.+...|++|++++++.  +..+.+.++++..   ...|..+.++..+.+.+...  ++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999998  79999999999999999999988653  3334444344431   22344443233333333221  46


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus        86 iD~li~nAG~   95 (256)
T PRK07889         86 LDGVVHSIGF   95 (256)
T ss_pred             CcEEEEcccc
Confidence            9999998863

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.0047  Score=53.42  Aligned_cols=75  Identities=17%  Similarity=0.230  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+|++|++|...++.+...|++|++++++.++    . ..+..   ...|..+.+++.+.+.....  +.+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999988754    1 22221   12344443234333333321  368999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+.|
T Consensus        80 i~~ag   84 (252)
T PRK07856         80 VNNAG   84 (252)
T ss_pred             EECCC
Confidence            99887

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.94  E-value=0.0053  Score=53.42  Aligned_cols=80  Identities=15%  Similarity=0.264  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHH----hCCC-e--eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNK----FGFD-D--AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~----~g~~-~--vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+||++++|...+..+...|++|+.+.+ ++++.+.+.++    .+.. .  ..|..+.+++.+.+.++..  +
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999988864 44443332212    2321 1  2344444244444443321  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      .+|+++.++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            6899999885

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.0057  Score=52.97  Aligned_cols=81  Identities=19%  Similarity=0.173  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHH---HhCCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKN---KFGFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|+++++|..+++.+...|++|+++.++.+ ..+.+.+   ..+.. .  ..|..+.+++.+.+.+...  +.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999987643 2222211   22322 1  2343343234443333221  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.+.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999983

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0071  Score=52.60  Aligned_cols=80  Identities=21%  Similarity=0.249  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCC---eeEecCChhhHHHHHHHHC--CCCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN--KFGFD---DAFNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      ++.+++|+|++|++|...++.+...|++|+++.++.+..+.+++  ..+..   ...|..+..++...+.+..  .+.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46799999999999999999999999999999988754333321  22322   1234444323333333322  13689


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.+.|
T Consensus        85 ~vi~~ag   91 (263)
T PRK08226         85 ILVNNAG   91 (263)
T ss_pred             EEEECCC
Confidence            9999888

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0077  Score=51.95  Aligned_cols=74  Identities=23%  Similarity=0.348  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ++++++|+||+|++|...++.+...|++|++++++. ++.+...  .+...  ..|..+.    +.+.+.. +.+|++|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~----~~~~~~~-~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKE----ESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCH----HHHHHhc-CCCCEEEE
Confidence            367999999999999999999999999999998876 2222111  11111  2344433    1222222 35999999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9973

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.92  E-value=0.0057  Score=53.01  Aligned_cols=81  Identities=21%  Similarity=0.304  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|++|++|...+..+...|++|+.++++.++.+.+.++   .+.. .  ..|..+.++..+.+.....  +.+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999887765544322   2322 1  2344444233333333221  368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |+++.+.|.
T Consensus        90 d~li~~ag~   98 (255)
T PRK06113         90 DILVNNAGG   98 (255)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.014  Score=51.68  Aligned_cols=105  Identities=19%  Similarity=0.194  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      -++.+++|+|++|++|...+..+.+.|++|+++.++.+ ..+.+.+   ..+...   ..|..+.+++.+.+.+...  +
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            34789999999999999999999889999999887643 2222221   223221   1333333233333333221  3


Q ss_pred             CccEEEECCCch---------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          227 GIDIYFENVGGK---------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       227 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      .+|++|.++|..                           ..+.+...+++.|++|.+++..
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~  184 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT  184 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            689999888731                           0123344556678999887644

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.92  E-value=0.018  Score=49.39  Aligned_cols=81  Identities=23%  Similarity=0.312  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHH---hCCC-eeE--ecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKNK---FGFD-DAF--NYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~-~vi--~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|++|++|...+..+...|++|+++.++.. +.+...+.   .+.. ..+  |..+.+++.+.+.+...  ++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3568999999999999999999999999977776544 22222212   2222 122  44443234343433322  25


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|.++.+.|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.91  E-value=0.02  Score=49.28  Aligned_cols=103  Identities=18%  Similarity=0.191  Sum_probs=63.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHH----HHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKV----NLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~----~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +.+++|+|++|++|...+.-+...|++|+.+.++ .++.    ..++ ..+.. .  ..|..+..++...+.+...  ++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999888899998877643 2222    2222 33332 1  2344433233333333221  36


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +|++|.+.|..                          ..+.+...++..|+++.+++...
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            89999999730                          02334555667789999887543

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.90  E-value=0.0031  Score=54.69  Aligned_cols=104  Identities=22%  Similarity=0.258  Sum_probs=75.3

Q ss_pred             hhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCC-e--e--EecCChh
Q 019042          143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFD-D--A--FNYKKEP  214 (347)
Q Consensus       143 ~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~--v--i~~~~~~  214 (347)
                      ..++..+.+..++++|+++|=+|  .|-|.+++..|+..|++|++++-|++..+.+++   +.|.. .  +  -|+.   
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~r---  132 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYR---  132 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccc---
Confidence            55666667778999999999999  468999999999999999999999998887774   23443 1  1  1222   


Q ss_pred             hHHHHHHHHCCCCccEEE-----ECCCc----hhHHHHHHhhccCCEEEEEccc
Q 019042          215 DLDAALKRCFPEGIDIYF-----ENVGG----KMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       215 ~~~~~i~~~~~~~~d~vi-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      ++       . +.||-|+     +..|.    ..+..+-++|+++|+++.-..+
T Consensus       133 d~-------~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         133 DF-------E-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             cc-------c-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence            11       1 1366664     34443    2678888899999999866543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.90  E-value=0.009  Score=52.10  Aligned_cols=81  Identities=21%  Similarity=0.240  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+|+++++|...+..+...|++|+++.+++++.+.+.+.+   +..   ...|..+.++..+.+.+...  +.+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4679999999999999999888889999999998887655443232   432   12344443233333333221  358


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999873

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.89  E-value=0.011  Score=46.75  Aligned_cols=99  Identities=21%  Similarity=0.249  Sum_probs=63.5

Q ss_pred             HHHhhhhc-CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC
Q 019042          146 YGGLYELC-SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       146 ~~~l~~~~-~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      +.++.+.. -.-.|++++|.| -|-+|.-.++.++.+|++|+++..++-+.-.+. .-|.. +.      .+.+.+.   
T Consensus        10 ~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~---   77 (162)
T PF00670_consen   10 VDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR---   77 (162)
T ss_dssp             HHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT---
T ss_pred             HHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh---
Confidence            33443332 345789999999 699999999999999999999999997755554 34432 22      2333332   


Q ss_pred             CCCccEEEECCCchh--HHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGGKM--LDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~  258 (347)
                        ..|++|.++|...  -..-+..|+.+-.+..+|.
T Consensus        78 --~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   78 --DADIFVTATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             --T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             --hCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence              3899999999853  3577788888888877775

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.88  E-value=0.014  Score=46.87  Aligned_cols=92  Identities=21%  Similarity=0.229  Sum_probs=62.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC--CeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF--DDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|.|+||+|-+|...++-|+.+|-.|++++++++|....+ ..-.  ..++      |....-..+.  ++|+||++.|.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Dif------d~~~~a~~l~--g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIF------DLTSLASDLA--GHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeeccccc------ChhhhHhhhc--CCceEEEeccC
Confidence            5889999999999999999999999999999999875433 2111  1222      2222112222  59999998874


Q ss_pred             h----------hHHHHHHhhccC--CEEEEEcccc
Q 019042          238 K----------MLDAVLLNMRIH--GRIAVCGMIS  260 (347)
Q Consensus       238 ~----------~~~~~~~~l~~~--G~~v~~g~~~  260 (347)
                      .          ..+..+..|+.-  -|++.+|...
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            2          234456667664  4777777643

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.87  E-value=0.0054  Score=51.29  Aligned_cols=112  Identities=20%  Similarity=0.231  Sum_probs=68.9

Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH---HhCCCee-Eec
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKN---KFGFDDA-FNY  210 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~---~~g~~~v-i~~  210 (347)
                      .++.+...|.  +.....+++|++||-+|  +|.|..++-+++..|.  +|+.+...++-.+.+++   .++...+ +..
T Consensus        54 ~is~P~~~a~--~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~  129 (209)
T PF01135_consen   54 TISAPSMVAR--MLEALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVV  129 (209)
T ss_dssp             EE--HHHHHH--HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEE
T ss_pred             echHHHHHHH--HHHHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEE
Confidence            3333444444  33556899999999999  5778999999988775  79999988875555543   3455332 212


Q ss_pred             CChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEc
Q 019042          211 KKEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       211 ~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g  257 (347)
                      .   |....+..  .+.||.|+-+.+-. .-...++.|+++|++|..-
T Consensus       130 g---dg~~g~~~--~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi  172 (209)
T PF01135_consen  130 G---DGSEGWPE--EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPI  172 (209)
T ss_dssp             S----GGGTTGG--G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEE
T ss_pred             c---chhhcccc--CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEE
Confidence            1   11111111  12699999877764 4577888999999999753

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.87  E-value=0.0064  Score=52.95  Aligned_cols=81  Identities=6%  Similarity=0.131  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhCCCe--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK---NKFGFDD--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga--~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~---~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+||  ++++|.+.++.+...|++|+.+.+.+...+.++   .+.+...  ..|..+.++..+.+.+...  ++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  569999999999999999998765533222222   1233322  2344443344444433322  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|+++.++|.
T Consensus        85 iD~lVnnAG~   94 (261)
T PRK08690         85 LDGLVHSIGF   94 (261)
T ss_pred             CcEEEECCcc
Confidence            9999999863

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.86  E-value=0.012  Score=55.00  Aligned_cols=138  Identities=17%  Similarity=0.182  Sum_probs=84.3

Q ss_pred             CCCceeeceEEEEecCCCCCCCCCCEEEe------c--------------cCcceeEeecCCCcceeccCCCCCcccccc
Q 019042           77 PGEPLSGYGVSKVLDSTHPNYKKDDLVWG------L--------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        77 ~G~e~~g~G~v~~vG~~v~~~~vGd~V~~------~--------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa  136 (347)
                      -|.|  .++.+..|+++..+.-+|+.-+.      +              +.|++++.++. . +..-  .+  ++    
T Consensus        90 ~~~~--a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~-vr~~--t~--i~----  157 (417)
T TIGR01035        90 TGES--AVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-R-VRTE--TD--IS----  157 (417)
T ss_pred             CchH--HHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-h-hhhh--cC--CC----
Confidence            4555  44477778888887666765431      0              35677666654 2 2220  01  11    


Q ss_pred             ccCCchhhHHHHh---hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          137 ILGMPGLTAYGGL---YELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       137 ~l~~~~~tA~~~l---~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                        ..+...++.++   .+..+..++++|+|+|+ |.+|..+++.++..| .+|+++.++.++.+.+.+.+|.. .++.. 
T Consensus       158 --~~~vSv~~~Av~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~-  232 (417)
T TIGR01035       158 --AGAVSISSAAVELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE-  232 (417)
T ss_pred             --CCCcCHHHHHHHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH-
Confidence              11112222222   12234467899999996 999999999999999 58999999988765343377763 33321 


Q ss_pred             hhhHHHHHHHHCCCCccEEEECCCch
Q 019042          213 EPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       213 ~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                        ++.+.+.     ++|+||+|++..
T Consensus       233 --~l~~~l~-----~aDvVi~aT~s~  251 (417)
T TIGR01035       233 --DLEEYLA-----EADIVISSTGAP  251 (417)
T ss_pred             --HHHHHHh-----hCCEEEECCCCC
Confidence              3333333     489999999863

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.86  E-value=0.016  Score=51.06  Aligned_cols=95  Identities=17%  Similarity=0.112  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ..+.+++|+|+ |++|.+++..++..| .+|+++.++.++.+.+.+.++....+.. .. +..+.+     ..+|+||+|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEEC
Confidence            45678999996 999999999999999 5999999999887766645543210111 10 111111     248999999


Q ss_pred             CCchhH------HHHHHhhccCCEEEEEcc
Q 019042          235 VGGKML------DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       235 ~g~~~~------~~~~~~l~~~G~~v~~g~  258 (347)
                      +.....      ......++++..++.+-.
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~~~v~DivY  222 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPGTIVYDMIY  222 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence            864321      112356677777776654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.86  E-value=0.0085  Score=52.28  Aligned_cols=80  Identities=14%  Similarity=0.230  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhCCC--eeEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKE---KVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|++++|+||++  ++|.+.++.+...|++|+.+.+++.   ..+.+..+.+..  ...|..+.+++.+.+.+...  +.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            478999999975  8999999999999999998877632   223332122321  12344444344444444322  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            899999987

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=96.86  E-value=0.013  Score=52.28  Aligned_cols=38  Identities=8%  Similarity=0.204  Sum_probs=32.1

Q ss_pred             CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCCHHHH
Q 019042          157 KGEYVYVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKEKV  195 (347)
Q Consensus       157 ~~~~vlI~ga--~g~vG~~a~qla~~~G~~V~~~~~~~~~~  195 (347)
                      .|++++|+|+  ++|+|.+.++.+...|++|++ .+...++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            5889999999  799999999999999999988 4443333

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.85  E-value=0.0076  Score=50.74  Aligned_cols=100  Identities=19%  Similarity=0.206  Sum_probs=67.1

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....++++++||-.|  .|.|..+..+++..+  .+|+++..+++-.+.+++.+   |...+ ..... |......  ..
T Consensus        70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~g-d~~~~~~--~~  143 (212)
T PRK13942         70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIVG-DGTLGYE--EN  143 (212)
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--cC
Confidence            456788999999998  467888888888775  59999999988777776433   33221 11111 2111110  11


Q ss_pred             CCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          226 EGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       226 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      +.||+|+-.... .......+.|+++|+++..
T Consensus       144 ~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        144 APYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            369998765443 5667788899999998875

>PRK06398 aldose dehydrogenase; Validated

Probab=96.84  E-value=0.0027  Score=55.25  Aligned_cols=75  Identities=19%  Similarity=0.185  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCC--CCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP--EGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--~~~d~vid~  234 (347)
                      +|.+++|+|++|++|...+..+...|++|+++.+++.+...+.     ....|..+..++.+.+.+...  +.+|++|.+
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4679999999999999999999999999999988764321110     112344443234443433321  368999998


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      .|
T Consensus        80 Ag   81 (258)
T PRK06398         80 AG   81 (258)
T ss_pred             CC
Confidence            87

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.84  E-value=0.0079  Score=51.79  Aligned_cols=80  Identities=18%  Similarity=0.222  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.++||+|++|++|...++.+...|++|++++++.++.+.+.+.+   +.. .  ..|..+.+++.+.+.....  +++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999998887655543222   221 1  2333333233333333221  358


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.+.|
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.83  E-value=0.009  Score=51.45  Aligned_cols=84  Identities=14%  Similarity=0.138  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC--ee--EecC--ChhhHHHHHHHHC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD--DA--FNYK--KEPDLDAALKRCF  224 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~--~v--i~~~--~~~~~~~~i~~~~  224 (347)
                      ...++.+++|+|++|++|...++.+...|++|++++++.++.+.+.+++   +..  .+  .|..  +..++.+.+..+.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            3457889999999999999999988889999999999887654443232   321  11  2322  2113333333222


Q ss_pred             C--CCccEEEECCCc
Q 019042          225 P--EGIDIYFENVGG  237 (347)
Q Consensus       225 ~--~~~d~vid~~g~  237 (347)
                      .  +.+|.+|.+++.
T Consensus        88 ~~~~~id~vi~~Ag~  102 (247)
T PRK08945         88 EQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHhCCCCEEEECCcc
Confidence            1  268999988763

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0085  Score=53.52  Aligned_cols=80  Identities=18%  Similarity=0.194  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH----------HHHHHHHH---HhCCC---eeEecCChhhHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----------EKVNLLKN---KFGFD---DAFNYKKEPDLDAAL  220 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~----------~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i  220 (347)
                      ++.+++|+|+++++|.+.++.+...|++|++++++.          ++.+.+.+   ..|..   ...|..+.++..+.+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            478999999999999999999999999999998762          23322221   23332   123444432444444


Q ss_pred             HHHCC--CCccEEEECC-C
Q 019042          221 KRCFP--EGIDIYFENV-G  236 (347)
Q Consensus       221 ~~~~~--~~~d~vid~~-g  236 (347)
                      .+...  +.+|++|.+. |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence            33322  3689999988 5

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.83  E-value=0.0081  Score=51.98  Aligned_cols=80  Identities=23%  Similarity=0.301  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE--KVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~--~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +|.+++|+|++|++|.+.++.+...|++|+.+.+...  ..+.++ ..+.. .  ..|..+.+++.+.+.+...  +++|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4679999999999999999999999999998865432  223333 33422 1  2333333234443433321  3689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.++|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99999873

>PLN02476 O-methyltransferase

Probab=96.80  E-value=0.023  Score=49.60  Aligned_cols=104  Identities=16%  Similarity=0.130  Sum_probs=72.1

Q ss_pred             hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC
Q 019042          150 YELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       150 ~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      ....+..+.++||=+|  .++|..++.+|+.+  +.+|+.+..+++..+.+++.   .|..+-+..... +..+.+.++.
T Consensus       111 ~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~  187 (278)
T PLN02476        111 AMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMI  187 (278)
T ss_pred             HHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHH
Confidence            3445667788999998  57899999999877  44899999999887777643   465433333222 4445554432


Q ss_pred             ----CCCccEEEECCCc----hhHHHHHHhhccCCEEEEE
Q 019042          225 ----PEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       225 ----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  256 (347)
                          .+.||.||=-...    ..+..++++|++||.++.=
T Consensus       188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence                2369998654443    2688899999999998753

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.80  E-value=0.02  Score=49.37  Aligned_cols=75  Identities=17%  Similarity=0.256  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+|++|++|...++.+...|++|+++.++.     .. ..+..   ...|..+.+++.+.+.+...  +.+|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467999999999999999999988999999999876     22 22221   12344443234443333221  358999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.+.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            999874

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.80  E-value=0.0055  Score=49.19  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=50.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC--HHHHHHHHHHh---CCC-ee--EecCChhhHHHHHHHHC--CCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGS--KEKVNLLKNKF---GFD-DA--FNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~--~~~~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~--~~~  227 (347)
                      ++++|+||++++|...++.+...|+ +|+.+.++  .++.+.+.+++   +.. .+  .|..+.+++...+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3799999999999999888888877 77888877  44444442233   431 12  23333324444444433  136


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.|.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999999883

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.028  Score=49.38  Aligned_cols=101  Identities=19%  Similarity=0.177  Sum_probs=64.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHC-CCCccE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCF-PEGIDI  230 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~-~~~~d~  230 (347)
                      +++++|+|+ |++|..++..+. .|++|+++++++++.+.+.+++   +..   ...|..+.+++.+.+.+.. .+++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357899997 799999988885 7999999999877655443233   321   1235444424444444331 136999


Q ss_pred             EEECCCch----h---------------HHHHHHhhccCCEEEEEcccc
Q 019042          231 YFENVGGK----M---------------LDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       231 vid~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +|.++|..    .               ++.+...++.+|+++.+++..
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence            99999831    1               233445566677777766543

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.016  Score=49.70  Aligned_cols=76  Identities=18%  Similarity=0.201  Sum_probs=52.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-C--eeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-D--DAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-~--~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .+++|+|++|++|...+..+...|++|+++++++++.+.+. +.+. .  ...|..+.+++.+.+.+.. ...|.++.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~d~~i~~a   79 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQLP-FIPELWIFNA   79 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHhcc-cCCCEEEEcC
Confidence            47999999999999988888889999999999988877665 3221 1  2345555434544444432 2357766666


Q ss_pred             C
Q 019042          236 G  236 (347)
Q Consensus       236 g  236 (347)
                      |
T Consensus        80 g   80 (240)
T PRK06101         80 G   80 (240)
T ss_pred             c
Confidence            5

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.78  E-value=0.0077  Score=52.43  Aligned_cols=80  Identities=15%  Similarity=0.268  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAA--SGAVGQLVGQFAKLVGCYVVGSAGS---KEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga--~g~vG~~a~qla~~~G~~V~~~~~~---~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||  ++++|.+.++.+...|++|+.+.+.   .++.+.+.++++..  ...|..+.++..+.+.+...  +.
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999996  5799999999998899999887543   33444343244532  22344444344444444332  47


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|+++.+.|
T Consensus        85 iD~lvnnAG   93 (260)
T PRK06997         85 LDGLVHSIG   93 (260)
T ss_pred             CcEEEEccc
Confidence            999999886

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.78  E-value=0.014  Score=54.30  Aligned_cols=74  Identities=19%  Similarity=0.215  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      -.+.+|+|.|+ |++|.+++..+...|+ +++++.++.++.+.+.++++...++.++   ++.+.+.     .+|+||.|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence            45789999996 9999999999999997 7999999988877666567622233321   3323332     38999999


Q ss_pred             CCch
Q 019042          235 VGGK  238 (347)
Q Consensus       235 ~g~~  238 (347)
                      ++.+
T Consensus       250 T~a~  253 (414)
T PRK13940        250 VNVL  253 (414)
T ss_pred             cCCC
Confidence            9985

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.77  E-value=0.01  Score=54.91  Aligned_cols=75  Identities=32%  Similarity=0.384  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-Cee--EecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-DDA--FNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~v--i~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+...+..+. ...  .|..+.    +.+.+.. +++|++|.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~----~~v~~~l-~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE----AALAELL-EKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH----HHHHHHh-CCCCEEEE
Confidence            478999999999999999999888999999999887655332211111 112  343333    1233222 35999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      +.|
T Consensus       252 nAG  254 (406)
T PRK07424        252 NHG  254 (406)
T ss_pred             CCC
Confidence            876

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.76  E-value=0.0094  Score=50.99  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=50.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHC--CCCcc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      ++++|+|++|++|...++.+...|++|+++.+ ++++.+...+++   +..   ...|..+..++.+.+.++.  .+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            37899999999999999999999999999887 444433322122   221   1234444323333333332  13689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        81 ~vi~~ag~   88 (242)
T TIGR01829        81 VLVNNAGI   88 (242)
T ss_pred             EEEECCCC
Confidence            99999873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.76  E-value=0.0087  Score=51.93  Aligned_cols=79  Identities=15%  Similarity=0.122  Sum_probs=52.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCC--Cee--EecCChhhHHHHHHHHCC--CC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK----FGF--DDA--FNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~----~g~--~~v--i~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +++++|+|++|++|...+..+...|++|+.++++.++.+.+.+.    .+.  .+.  .|..+.++....+.+...  ++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999887655443322    221  112  243443233333333221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|+++.+.|
T Consensus        82 id~vv~~ag   90 (259)
T PRK12384         82 VDLLVYNAG   90 (259)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0098  Score=52.01  Aligned_cols=78  Identities=19%  Similarity=0.198  Sum_probs=51.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +++|+|++|++|...++.+...|++|++++++.++.+.+.+.+   +.. .  ..|..+..++.+.+.....  +++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999988889999999999887655443222   322 1  1233333233333332211  368999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.+.|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999884

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0065  Score=51.79  Aligned_cols=74  Identities=23%  Similarity=0.173  Sum_probs=51.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-CeeEecCChhhHHHHHHHHCCC-CccEEEECC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-DDAFNYKKEPDLDAALKRCFPE-GIDIYFENV  235 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~  235 (347)
                      +.+++|+|++|++|...++.+...|.+|+++.++.++ .     +.. ....|..+..++.+.+.+.... ++|++|.+.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            5789999999999999999999999999999987654 1     111 1234544442344444443332 689999988


Q ss_pred             Cc
Q 019042          236 GG  237 (347)
Q Consensus       236 g~  237 (347)
                      |.
T Consensus        77 g~   78 (234)
T PRK07577         77 GI   78 (234)
T ss_pred             CC
Confidence            74

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.76  E-value=0.0089  Score=51.59  Aligned_cols=79  Identities=18%  Similarity=0.178  Sum_probs=53.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHC--CCCccE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCF--PEGIDI  230 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~  230 (347)
                      .++||+|++|++|...+..+...|++|++++++.++.+.+.+.+   +..   ...|..+.+++...+.++.  .+++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57999999999999999998889999999999887766554222   221   1234444323433333322  125899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +|.+.+.
T Consensus        82 vi~~a~~   88 (255)
T TIGR01963        82 LVNNAGI   88 (255)
T ss_pred             EEECCCC
Confidence            9988863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.0049  Score=53.55  Aligned_cols=76  Identities=21%  Similarity=0.263  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      +|.+++|+|++|++|...++.+...|++|++++++.++.  ..  -... ...|..+.++..+.+.++..  +++|++|.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   83 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH   83 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            478999999999999999999999999999999876531  11  0111 12344443233333322211  36899999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      +.|
T Consensus        84 ~ag   86 (260)
T PRK06523         84 VLG   86 (260)
T ss_pred             CCc
Confidence            887

>PRK09135 pteridine reductase; Provisional

Probab=96.72  E-value=0.012  Score=50.63  Aligned_cols=80  Identities=10%  Similarity=0.139  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHh---CC-C---eeEecCChhhHHHHHHHHC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKNKF---GF-D---DAFNYKKEPDLDAALKRCF--PE  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~~~---g~-~---~vi~~~~~~~~~~~i~~~~--~~  226 (347)
                      .+.+++|+|++|++|..++..+...|++|++++++. ++.+.+.+.+   +. .   ...|..+.+.+.+.+....  -+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999888999999999753 3333332121   11 1   1234444323333333221  13


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.+.|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            5899999987

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.017  Score=50.68  Aligned_cols=80  Identities=18%  Similarity=0.155  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCe-e--EecCChhhHHHHHHHHC--CCCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDD-A--FNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~-v--i~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      ..+++|+||+|++|...++.+...|++|++++++.++.+.+.+   ..+... .  .|..+.+++.+.+.+..  -+++|
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE   89 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4589999999999999999998899999999987765544331   223321 1  24444323333333321  13689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.++|.
T Consensus        90 ~vi~~Ag~   97 (274)
T PRK07775         90 VLVSGAGD   97 (274)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.70  E-value=0.0099  Score=51.20  Aligned_cols=81  Identities=14%  Similarity=0.185  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHH---HhCCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKN---KFGFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|++|++|...+..+...|++|++. .++.++.+.+.+   ..+.. .  ..|..+.+++...+.+...  ++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999998764 556555433321   23332 1  1343343234343433321  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.69  E-value=0.011  Score=47.74  Aligned_cols=99  Identities=21%  Similarity=0.199  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEec-CC---------------hhhHHHHHH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNY-KK---------------EPDLDAALK  221 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~-~~---------------~~~~~~~i~  221 (347)
                      .-+|+|+|+ |.+|+.|+.+++.+|++|+......++.+..+ ..++..+... ..               ...+...+.
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            368999995 99999999999999999999999998888877 7766433221 00               002333333


Q ss_pred             HHCCCCccEEEECC---Cch----hHHHHHHhhccCCEEEEEccc
Q 019042          222 RCFPEGIDIYFENV---GGK----MLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       222 ~~~~~~~d~vid~~---g~~----~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +... .+|++|-+.   +..    .-+..++.|+++..++.+..-
T Consensus        98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D  141 (168)
T PF01262_consen   98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD  141 (168)
T ss_dssp             HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred             HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence            3211 279988533   111    346778889988888888653

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK12743 oxidoreductase; Provisional

Probab=96.66  E-value=0.012  Score=50.93  Aligned_cols=80  Identities=16%  Similarity=0.249  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH---HhCCC-ee--EecCChhhHHHHHHHHCC--CCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKN---KFGFD-DA--FNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~---~~g~~-~v--i~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +++++|+|++|++|...++.+...|++|+.+.+ +.++.+.+.+   ..+.. +.  .|..+..++...+.++..  +.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999988764 4343333321   23432 22  344443233333333221  358


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.012  Score=51.67  Aligned_cols=80  Identities=23%  Similarity=0.324  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HH----HHHHHhCCC-e--eEecCChhhHHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-------VN----LLKNKFGFD-D--AFNYKKEPDLDAALKR  222 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-------~~----~~~~~~g~~-~--vi~~~~~~~~~~~i~~  222 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.+.       .+    .++ ..+.. .  ..|..+.+++.+.+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence            46799999999999999999998999999999986532       11    122 23332 1  2344443233333333


Q ss_pred             HCC--CCccEEEECCCc
Q 019042          223 CFP--EGIDIYFENVGG  237 (347)
Q Consensus       223 ~~~--~~~d~vid~~g~  237 (347)
                      ...  +.+|++|.++|.
T Consensus        84 ~~~~~g~id~li~~ag~  100 (273)
T PRK08278         84 AVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHhCCCCEEEECCCC
Confidence            211  368999998873

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.64  E-value=0.0097  Score=59.15  Aligned_cols=81  Identities=20%  Similarity=0.254  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC----eeEecCChhhHHHHHHHHC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD----DAFNYKKEPDLDAALKRCF--PE  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~----~vi~~~~~~~~~~~i~~~~--~~  226 (347)
                      .+++++|+|++|++|...++.+...|++|++++++.++.+.+.+.+    +..    ...|..+.+++.+.+.+..  -+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999887665543232    321    1234444324444444332  13


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|++|.++|.
T Consensus       493 ~iDilV~nAG~  503 (676)
T TIGR02632       493 GVDIVVNNAGI  503 (676)
T ss_pred             CCcEEEECCCC
Confidence            69999999983

>PRK08264 short chain dehydrogenase; Validated

Probab=96.63  E-value=0.013  Score=50.11  Aligned_cols=75  Identities=23%  Similarity=0.271  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCCCCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      .+.+++|+||+|++|...++.+...|+ +|+++.++.++.+.    .+.. .  ..|..+.+++.+.+...  +.+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence            467899999999999999999999999 99999988765432    2221 1  23444432333333322  2589999


Q ss_pred             ECCCc
Q 019042          233 ENVGG  237 (347)
Q Consensus       233 d~~g~  237 (347)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98875

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.61  E-value=0.016  Score=49.92  Aligned_cols=80  Identities=18%  Similarity=0.185  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHH---HCCCCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKR---CFPEGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~---~~~~~~d  229 (347)
                      ++.+++|+|++|++|...+..+...|++|+.+.+ +.++.+.+.+.++.. .  ..|..+.+++.+.+.+   ..+.++|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            3568999999999999999999889999987654 455544444345432 1  1344443233333333   2222489


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.+.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999875

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.57  E-value=0.016  Score=51.75  Aligned_cols=102  Identities=18%  Similarity=0.242  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC----Ce----eEecCChhh---HHHHHHHHCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF----DD----AFNYKKEPD---LDAALKRCFP  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~----~~----vi~~~~~~~---~~~~i~~~~~  225 (347)
                      .+.+++|+|+++|+|..++.-+...|++|+..+++.++.+.+.+++..    ..    .+|-.+...   +.+.+++. .
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~-~  112 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK-E  112 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-C
Confidence            467999999999999999999999999999999998776666644432    12    233333211   23333321 1


Q ss_pred             CCccEEEECCCch------------------------hHHHHHHhhccC--CEEEEEccc
Q 019042          226 EGIDIYFENVGGK------------------------MLDAVLLNMRIH--GRIAVCGMI  259 (347)
Q Consensus       226 ~~~d~vid~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~  259 (347)
                      ...|+.|.++|--                        ..+.++..|+..  +|+|.+++.
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~  172 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI  172 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence            2689999988820                        124455566655  799988764

>TIGR02415 23BDH acetoin reductases

Probab=96.57  E-value=0.014  Score=50.33  Aligned_cols=79  Identities=14%  Similarity=0.174  Sum_probs=52.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHCC--CCccE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      .+++|+|++|++|...++.+...|++|+.+.+++++.+.+.+.   .+.. .  ..|..+.+++.+.+.+...  +.+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3689999999999999999999999999999887655443322   2321 1  2344443233333333321  25899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +|.+.|.
T Consensus        81 vi~~ag~   87 (254)
T TIGR02415        81 MVNNAGV   87 (254)
T ss_pred             EEECCCc
Confidence            9998873

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05599 hypothetical protein; Provisional

Probab=96.57  E-value=0.014  Score=50.32  Aligned_cols=77  Identities=14%  Similarity=0.132  Sum_probs=50.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC--e--eEecCChhhHHHHHHHHCC--CCccE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD--D--AFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~--~--vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      +++|+|+++++|.+.+..+. .|++|+++.+++++.+.+.+++   |..  .  .+|..+.++..+.+.+...  +++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999988888776 4999999999888776554333   322  1  2344443233333333221  36899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      ++.+.|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9988873

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=96.55  E-value=0.047  Score=49.69  Aligned_cols=96  Identities=17%  Similarity=0.148  Sum_probs=65.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhCCCeeEecCChhhHHHHHH-------------
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLV--GCYVVGSA--GSKEKVNLLKNKFGFDDAFNYKKEPDLDAALK-------------  221 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~--~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~-------------  221 (347)
                      ++|.|.|++|++|..++.++++.  .++|++++  ++.+++....++++...+.-.++  ...+.++             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G   79 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG   79 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence            47999999999999999999876  56888886  34445544444888876544433  2222222             


Q ss_pred             -----HHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          222 -----RCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       222 -----~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                           ++... .+|+|+.++++ ..+.-.+..++.|-++.+.
T Consensus        80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA  121 (385)
T PRK05447         80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA  121 (385)
T ss_pred             hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence                 22222 58999999977 5777888888877776553

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.54  E-value=0.084  Score=40.26  Aligned_cols=92  Identities=17%  Similarity=0.206  Sum_probs=57.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCH--HHH-HHHHHHhCCCeeEecCChhhHHHHHH--------------
Q 019042          161 VYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSK--EKV-NLLKNKFGFDDAFNYKKEPDLDAALK--------------  221 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~--~~~-~~~~~~~g~~~vi~~~~~~~~~~~i~--------------  221 (347)
                      |.|.|++|.+|..++.+.++..  ++|++.+...  +++ +.++ +|....+.-.++  +..+.++              
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~--~~~~~l~~~~~~~~~~~~v~~   77 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADE--EAYEELKKALPSKGPGIEVLS   77 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSH--HHHHHHHHHHHHTTSSSEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCH--HHHHHHHHHhhhcCCCCEEEe
Confidence            5799999999999999999996  6887776433  333 3344 788776655443  2222222              


Q ss_pred             ------HHCC-CCccEEEECCCc-hhHHHHHHhhccCCEEEE
Q 019042          222 ------RCFP-EGIDIYFENVGG-KMLDAVLLNMRIHGRIAV  255 (347)
Q Consensus       222 ------~~~~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  255 (347)
                            ++.. ..+|+++.++.+ ..+.-.+..++.+-++.+
T Consensus        78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence                  2222 258888887755 677777788877655543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.54  E-value=0.0054  Score=53.47  Aligned_cols=76  Identities=14%  Similarity=0.181  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      ++.+++|+|++|++|.+.++.+...|++|+.++++.++.+.    .... ...|..+..++.+.+.+...  +.+|++|.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999877654321    1111 12344443234443433321  36899999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      +.|
T Consensus        84 ~Ag   86 (266)
T PRK06171         84 NAG   86 (266)
T ss_pred             CCc
Confidence            887

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.024  Score=49.12  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~  227 (347)
                      .+.+++|+|++|++|...++.+...|++|+++.+. .++.+.+.+.+   +.. +  ..|..+..++.+.+.+..  .++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999888899999887653 34433332122   332 1  234444323333333322  136


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.+.|
T Consensus        88 iD~vi~~ag   96 (258)
T PRK09134         88 ITLLVNNAS   96 (258)
T ss_pred             CCEEEECCc
Confidence            899999987

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.53  E-value=0.035  Score=48.53  Aligned_cols=96  Identities=19%  Similarity=0.117  Sum_probs=67.4

Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      -+||+....+..+....---.|.+|+|.|.+.-+|.-++.++...|++|+++.+...                     ++
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l  195 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM  195 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            356655555555544322347899999998666999999999999999998875421                     22


Q ss_pred             HHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccc
Q 019042          217 DAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       217 ~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      .+.+++     +|+||.++|.+ .+..  +.++++-.++.+|...
T Consensus       196 ~~~~~~-----ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        196 ASYLKD-----ADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHHhh-----CCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence            233332     89999999986 3333  4688888888888753

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.53  E-value=0.018  Score=48.13  Aligned_cols=101  Identities=15%  Similarity=0.157  Sum_probs=66.0

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....++++++||-.|  .|.|..++.+++..+  .+|++++.+++-.+.+++.   .+....+..... |..+.+..  .
T Consensus        66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~~--~  140 (205)
T PRK13944         66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLEK--H  140 (205)
T ss_pred             HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCcc--C
Confidence            446778899999998  467888888888764  5999999998866666533   333211111111 22211111  1


Q ss_pred             CCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          226 EGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       226 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      +.+|+|+-+... .......+.|+++|+++..
T Consensus       141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        141 APFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             CCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            369999876654 4556778899999999864

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=96.52  E-value=0.11  Score=44.50  Aligned_cols=164  Identities=18%  Similarity=0.204  Sum_probs=92.0

Q ss_pred             ChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHhCCCeeE--ecCChhhHHH---HHHHHCCCCccEEEECCCch
Q 019042          168 GAVGQLVGQFAKLVGCYVVGSAGSKEK----VNLLKNKFGFDDAF--NYKKEPDLDA---ALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       168 g~vG~~a~qla~~~G~~V~~~~~~~~~----~~~~~~~~g~~~vi--~~~~~~~~~~---~i~~~~~~~~d~vid~~g~~  238 (347)
                      +++|.+.++-+.+.|++|+++.++.++    .+.+.++.+.. ++  |..+.+++..   .+.+..++.+|+++.+.+..
T Consensus         6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~   84 (241)
T PF13561_consen    6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGIS   84 (241)
T ss_dssp             SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESC
T ss_pred             CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence            899999999999999999999999987    34444356653 33  3333323333   33333435799999876521


Q ss_pred             ------------------------------hHHHHHHhhccCCEEEEEcccccccCCCCccc-------------cchHH
Q 019042          239 ------------------------------MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGV-------------HNLMQ  275 (347)
Q Consensus       239 ------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-------------~~~~~  275 (347)
                                                    ..+.+...++++|+++.++.............             ....+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~e  164 (241)
T PF13561_consen   85 PPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKE  164 (241)
T ss_dssp             TGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHH
Confidence                                          12446667888999998876543221111000             00112


Q ss_pred             HHh-ccceeeeeEecccccchHHHH---HHHHHHHHcCCcccccceeeccccHHHHHHHhHcCC
Q 019042          276 VVG-KRIRMEGFLAGDFYHQYPKFL---ELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQ  335 (347)
Q Consensus       276 ~~~-~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~  335 (347)
                      +-. +++++-...-+.......+.+   +++.+.+.+   ..+..+....+|+.++...+.+..
T Consensus       165 l~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~---~~pl~r~~~~~evA~~v~fL~s~~  225 (241)
T PF13561_consen  165 LAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKK---RIPLGRLGTPEEVANAVLFLASDA  225 (241)
T ss_dssp             HGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHH---HSTTSSHBEHHHHHHHHHHHHSGG
T ss_pred             hccccCeeeeeecccceeccchhccccccchhhhhhh---hhccCCCcCHHHHHHHHHHHhCcc
Confidence            222 466665555443322212222   233333321   122222237889999999888754

...

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.51  E-value=0.025  Score=48.05  Aligned_cols=102  Identities=25%  Similarity=0.303  Sum_probs=72.3

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC---CeeEecCChhhHHHHHHHHCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGF---DDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ......+|++||=.+  +|.|-.+..+++..|. +|++++-+++-++.++++..-   .. +.+... |. +.+  ..++
T Consensus        45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-dA-e~L--Pf~D  117 (238)
T COG2226          45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-DA-ENL--PFPD  117 (238)
T ss_pred             HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-ch-hhC--CCCC
Confidence            334566899999887  6889999999999975 999999999988888754432   11 222111 11 111  1233


Q ss_pred             -CccEEEECCCc-------hhHHHHHHhhccCCEEEEEccc
Q 019042          227 -GIDIYFENVGG-------KMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       227 -~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                       .||++.-+.|-       ..+.+..+.|+|+|+++++...
T Consensus       118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~  158 (238)
T COG2226         118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS  158 (238)
T ss_pred             CccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence             68998776663       3788999999999999988764

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.51  E-value=0.046  Score=46.76  Aligned_cols=103  Identities=17%  Similarity=0.120  Sum_probs=70.4

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC-
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF-  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~-  224 (347)
                      ...+..++++||=.|  .+.|..++.+++..  +.+|+.+..+++..+.+++.   .|...-+..... +..+.+.++. 
T Consensus        62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHh
Confidence            445667788999998  57788888888876  35999999999887777643   344322332222 4555555442 


Q ss_pred             ---CCCccEEEECCCc----hhHHHHHHhhccCCEEEEE
Q 019042          225 ---PEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       225 ---~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  256 (347)
                         .+.||+||-....    ..+..+.+++++||.++.-
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence               2379999855432    3678889999999987753

>PLN00015 protochlorophyllide reductase

Probab=96.50  E-value=0.018  Score=51.58  Aligned_cols=75  Identities=15%  Similarity=0.147  Sum_probs=51.7

Q ss_pred             EEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCC--Ce----eEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          162 YVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGF--DD----AFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~--~~----vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      +|+|+++++|...++.+...| ++|++++++.++.+.+.++++.  ..    .+|..+.+++.+.+.++..  +.+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999998888899 8999999988776655435432  11    2455444234333433322  3689999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      .++|
T Consensus        81 nnAG   84 (308)
T PLN00015         81 CNAA   84 (308)
T ss_pred             ECCC
Confidence            9887

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.49  E-value=0.04  Score=45.40  Aligned_cols=98  Identities=16%  Similarity=0.117  Sum_probs=61.9

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCC-C
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPE-G  227 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~-~  227 (347)
                      ...+.+|++||..|+ | .|..+..+++..  ..+|++++.++..    . ..+... ..|..+. +..+.+.+.+++ +
T Consensus        27 ~~~i~~g~~VLDiG~-G-tG~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~   98 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-A-PGGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK   98 (188)
T ss_pred             hcccCCCCEEEEecC-C-CCHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence            456789999999995 4 344555555554  3489999988753    1 223321 1243333 444455555544 7


Q ss_pred             ccEEEECC-----C-------------chhHHHHHHhhccCCEEEEEc
Q 019042          228 IDIYFENV-----G-------------GKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       228 ~d~vid~~-----g-------------~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +|+|+...     |             ...+..+.++|+++|+++...
T Consensus        99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            99999531     2             135677888999999998754

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.019  Score=57.08  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=55.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +.+++|+||+|++|...+..+...|++|+++++++++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  +++|
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  450 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD  450 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            678999999999999999999889999999999988765554233   321 1  2344443234444443321  3689


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.+.|
T Consensus       451 ~li~~Ag  457 (657)
T PRK07201        451 YLVNNAG  457 (657)
T ss_pred             EEEECCC
Confidence            9999987

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.021  Score=49.28  Aligned_cols=81  Identities=17%  Similarity=0.170  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC-----
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF-----  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~-----  224 (347)
                      ++.+++|+|++|++|...++.+...|++|++. .++.++.+.+.+.+   +.. .  ..|..+.+++.+.+++..     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            35789999999999999999998899998775 56665543333232   221 1  234444324444444331     


Q ss_pred             --C-CCccEEEECCCc
Q 019042          225 --P-EGIDIYFENVGG  237 (347)
Q Consensus       225 --~-~~~d~vid~~g~  237 (347)
                        + +++|++|.+.|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence              1 258999998873

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.47  E-value=0.022  Score=49.45  Aligned_cols=81  Identities=20%  Similarity=0.190  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHH---HhCCC---eeEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKN---KFGFD---DAFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|++|++|...++.+...|++|+++.++. +..+.+.+   ..+..   ...|..+..+..+.+.....  ++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999988887743 33222221   22332   12344443233333332211  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|+++.+.|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.47  E-value=0.074  Score=46.59  Aligned_cols=95  Identities=13%  Similarity=0.127  Sum_probs=61.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ..++.+++|+|+ |++|.+++..+...|++|+++.++.++.+.+.+.+... .+...    .+.+    .....+|+||+
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~----~~~~----~~~~~~DivIn  184 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF----SMDE----LPLHRVDLIIN  184 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe----chhh----hcccCccEEEE
Confidence            345789999996 89999999888888999999999988766554344321 11111    1111    11125899999


Q ss_pred             CCCchh---H---HHHHHhhccCCEEEEEcc
Q 019042          234 NVGGKM---L---DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       234 ~~g~~~---~---~~~~~~l~~~G~~v~~g~  258 (347)
                      |++...   .   ......++++..++.+..
T Consensus       185 atp~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       185 ATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            997531   1   112345777777777755

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.46  E-value=0.042  Score=44.27  Aligned_cols=97  Identities=16%  Similarity=0.087  Sum_probs=63.7

Q ss_pred             cccCCchhhHHHHhhhhcCCCCCCEEEEEcCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChh
Q 019042          136 GILGMPGLTAYGGLYELCSPKKGEYVYVSAASGA-VGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEP  214 (347)
Q Consensus       136 a~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~-vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~  214 (347)
                      .-.|+....+...+.....--.|.+|+|.|+ |. +|..++..++..|++|+++.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence            3445555555555544433457899999997 65 699899999999999888886532                     


Q ss_pred             hHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          215 DLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       215 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ++.+.+.+     +|+||.+++...+ --...++++-.++.++.+.
T Consensus        80 ~l~~~l~~-----aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          80 NLKEHTKQ-----ADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             hHHHHHhh-----CCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence            22233332     8999999987432 2223467766777777643

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=96.46  E-value=0.013  Score=48.91  Aligned_cols=103  Identities=16%  Similarity=0.132  Sum_probs=70.0

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHC---
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCF---  224 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~---  224 (347)
                      .+..+..+||-+|  .++|+.++.+|+.+  +.+|+.+..++++.+.+++   ..|...-+..... +..+.+.++.   
T Consensus        41 ~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~~  117 (205)
T PF01596_consen   41 VRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELANDG  117 (205)
T ss_dssp             HHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHTT
T ss_pred             HHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhcc
Confidence            4445667999998  68899999999986  5799999999998877764   3354332333222 4444444432   


Q ss_pred             -CCCccEEE-ECCCc---hhHHHHHHhhccCCEEEEEcc
Q 019042          225 -PEGIDIYF-ENVGG---KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 -~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g~  258 (347)
                       .+.||+|| |+.-.   ..+..++++|+++|.++.=..
T Consensus       118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~  156 (205)
T PF01596_consen  118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNV  156 (205)
T ss_dssp             TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETT
T ss_pred             CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEccc
Confidence             23699985 55433   267889999999999885543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK05855 short chain dehydrogenase; Validated

Probab=96.45  E-value=0.015  Score=56.85  Aligned_cols=81  Identities=19%  Similarity=0.136  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      .+.+++|+||+|++|...++.+...|++|++++++.++.+.+.+.   .|.. .  ..|..+.+...+.+.+...  +.+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            467999999999999999999999999999999988766554322   2331 1  2344444233333433321  368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.++|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999874

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.45  E-value=0.045  Score=44.98  Aligned_cols=98  Identities=14%  Similarity=0.129  Sum_probs=64.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      .+.++.+|+-.|+  |.|..++.+++.. +++|++++.+++..+.+++   +.+... +..... +..+ +..  .+.+|
T Consensus        42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence            3455889999984  5677777777655 6799999999887666653   334433 222222 3322 111  23799


Q ss_pred             EEEECCCc---hhHHHHHHhhccCCEEEEEcc
Q 019042          230 IYFENVGG---KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       230 ~vid~~g~---~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+.....   ..+..+.+.|+++|+++.+-.
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~~  146 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPGGRFLALKG  146 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence            99975432   367788899999999997743

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=96.44  E-value=0.058  Score=46.36  Aligned_cols=102  Identities=12%  Similarity=0.086  Sum_probs=71.2

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHC-
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCF-  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~-  224 (347)
                      ...+..+.++||=+|  ..+|..++.+|+..  +.+|+.+..++++.+.+++   +.|..+-+..... +..+.+.++. 
T Consensus        73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~  149 (247)
T PLN02589         73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE  149 (247)
T ss_pred             HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence            344556667899998  68899999999886  5699999999987777653   3454333444333 5555555543 


Q ss_pred             ----CCCccEEEECCCc----hhHHHHHHhhccCCEEEE
Q 019042          225 ----PEGIDIYFENVGG----KMLDAVLLNMRIHGRIAV  255 (347)
Q Consensus       225 ----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  255 (347)
                          .+.||+||--...    ..+..++++|++||.++.
T Consensus       150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence                1479998654443    267888999999999774

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.42  E-value=0.065  Score=47.27  Aligned_cols=93  Identities=19%  Similarity=0.037  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC----CeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGF----DDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      .+.+|+|.|+ |+.|.+++..+...|+ +|+++.++.++.+.+.+.++.    ..+....   ++.+.+     ..+|+|
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV  196 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL  196 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence            4678999996 9999999999999998 899999998887766545432    1222111   222222     248999


Q ss_pred             EECCCch-----hHHHHHHhhccCCEEEEEcc
Q 019042          232 FENVGGK-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       232 id~~g~~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |+|+...     ........++++..+..+-.
T Consensus       197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY  228 (284)
T PRK12549        197 VHATPTGMAKHPGLPLPAELLRPGLWVADIVY  228 (284)
T ss_pred             EECCcCCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence            9996321     10111245666666665544

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.031  Score=47.94  Aligned_cols=77  Identities=14%  Similarity=0.156  Sum_probs=51.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC-ee--EecCChhhHHHHHHHHCCCCccEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD-DA--FNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~v--i~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      .+++|+||+|++|...++.+.+.|++|+++++++++.+.+.+.+    +.. +.  .|..+..++.+.+.+.. ..+|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence            47999999999999999999999999999999887655443222    111 11  23333323333333322 247999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +.+.|
T Consensus        81 v~~ag   85 (243)
T PRK07102         81 LIAVG   85 (243)
T ss_pred             EECCc
Confidence            98776

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.40  E-value=0.019  Score=54.80  Aligned_cols=73  Identities=15%  Similarity=0.111  Sum_probs=53.8

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      .+.+|++|+|+|. |..|++++.+++..|++|++.+..+.+.+.++ ++|... +...   ...+.+.     .+|+|+.
T Consensus         8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~~-~~~~---~~~~~l~-----~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVAT-VSTS---DAVQQIA-----DYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCEE-EcCc---chHhHhh-----cCCEEEE
Confidence            4557899999995 99999999999999999999997776666666 677632 2221   1112222     3799999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      +.|-
T Consensus        77 SpGi   80 (488)
T PRK03369         77 SPGF   80 (488)
T ss_pred             CCCC
Confidence            9885

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.38  E-value=0.04  Score=46.48  Aligned_cols=100  Identities=20%  Similarity=0.211  Sum_probs=65.6

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....++++++||-.|  .|.|..++.+++..+.  +|++++.+++-.+.+++.   .|.+.+ ..... |..+...  ..
T Consensus        71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v-~~~~~-d~~~~~~--~~  144 (215)
T TIGR00080        71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNV-IVIVG-DGTQGWE--PL  144 (215)
T ss_pred             HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCe-EEEEC-CcccCCc--cc
Confidence            446788999999998  4678888888887654  799999998877766533   343321 11111 2211111  11


Q ss_pred             CCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          226 EGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       226 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      +.||+|+-+... .......+.|+++|+++..
T Consensus       145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            269988755433 4566788899999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.35  E-value=0.02  Score=52.14  Aligned_cols=77  Identities=17%  Similarity=0.194  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC----C-eeEecCChhhHHHHHHHHCCCCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF----D-DAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +|.+|||+||+|.+|..+++.+...|.+|++++++........+.++.    . ...|..+.+++.+.+.+   .++|+|
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~v   79 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE---FKPEIV   79 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh---cCCCEE
Confidence            467999999999999999999999999999998766532222112221    1 11233333133333322   158999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+++
T Consensus        80 ih~A~   84 (349)
T TIGR02622        80 FHLAA   84 (349)
T ss_pred             EECCc
Confidence            99987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.33  E-value=0.1  Score=39.31  Aligned_cols=100  Identities=23%  Similarity=0.309  Sum_probs=66.4

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH---HhCCCe--eEecCChhhHHHHHHHHC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKN---KFGFDD--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~~  224 (347)
                      ....+.++++|+-.|.  |.|..+..+++..+ .+|++++.++...+.+++   .++...  ++..    +....+.. .
T Consensus        13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~~-~   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG----DAPEALED-S   85 (124)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec----cccccChh-h
Confidence            3346677889999984  45999999999874 699999999887777653   233322  2222    11111111 1


Q ss_pred             CCCccEEEECCCc----hhHHHHHHhhccCCEEEEEc
Q 019042          225 PEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       225 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+.+|+|+.....    +.++.+.+.|+++|+++...
T Consensus        86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            1369999876533    26788999999999998653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.32  E-value=0.028  Score=48.58  Aligned_cols=79  Identities=14%  Similarity=0.164  Sum_probs=50.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHCC--CCcc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      .+++|+|++|++|...+..+...|++|++++++. ++.+...+.   .+.. .  ..|..+..++.+.+.+...  +.+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999999988653 222222112   2321 1  2344443234443433322  3589


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99998873

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.32  E-value=0.03  Score=48.13  Aligned_cols=81  Identities=25%  Similarity=0.278  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHH---hCCC-ee--EecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNK---FGFD-DA--FNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~-~v--i~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|++|++|...+..+...|++|+++.+ ++++.+.+.+.   .+.. ..  .|..+.+.+.+.+.+...  +.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999988889999887654 34433333212   2321 11  233333233333333322  25


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.32  E-value=0.089  Score=48.39  Aligned_cols=95  Identities=22%  Similarity=0.263  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      -++.++||+|+ |-+|..++..+...|. +|++..|+.+|...+.+++|+. ++.++   ++.+.+.     .+|+||.+
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~-----~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALA-----EADVVISS  245 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhh-----hCCEEEEe
Confidence            46789999997 9999999999999996 8999999999877666689953 33332   3334443     38999999


Q ss_pred             CCch----hHHHHHHhhccCC--EEEEEcccc
Q 019042          235 VGGK----MLDAVLLNMRIHG--RIAVCGMIS  260 (347)
Q Consensus       235 ~g~~----~~~~~~~~l~~~G--~~v~~g~~~  260 (347)
                      ++.+    .-....+.++..-  -++.++.|.
T Consensus       246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         246 TSAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             cCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            9875    2233334444433  355666543

>PRK00811 spermidine synthase; Provisional

Probab=96.29  E-value=0.049  Score=48.01  Aligned_cols=96  Identities=9%  Similarity=0.063  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC-----C--CeeEecCChhhHHHHHHHHCCCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFG-----F--DDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g-----~--~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      +.++||++|  +|.|..+..+++..+. +|+++..+++-.+.+++.+.     .  +.-+..... |..+.+.. ..+.+
T Consensus        76 ~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~y  151 (283)
T PRK00811         76 NPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENSF  151 (283)
T ss_pred             CCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCcc
Confidence            467899999  4668888888887665 89999999988888874342     1  111111111 33344433 33479


Q ss_pred             cEEEECCCc-----------hhHHHHHHhhccCCEEEEE
Q 019042          229 DIYFENVGG-----------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       229 d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~  256 (347)
                      |+|+-....           +.+..+.+.|+++|.++.-
T Consensus       152 DvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        152 DVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             cEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            999864321           2356778899999999864

>PRK08309 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.28  Score=39.93  Aligned_cols=91  Identities=16%  Similarity=0.121  Sum_probs=57.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---e--eEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---D--AFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~--vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      +++|+|++ ++|...++.+...|++|+++++++++.+.+...++..   .  ..|..+.+++.+.+.....  +++|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            58999986 5555566666678999999999887766655334321   1  1366554355555554322  3689999


Q ss_pred             ECCCchhHHHHHHhhccCC
Q 019042          233 ENVGGKMLDAVLLNMRIHG  251 (347)
Q Consensus       233 d~~g~~~~~~~~~~l~~~G  251 (347)
                      +.+-...-.......+..|
T Consensus        81 ~~vh~~~~~~~~~~~~~~g   99 (177)
T PRK08309         81 AWIHSSAKDALSVVCRELD   99 (177)
T ss_pred             EeccccchhhHHHHHHHHc
Confidence            9887654455555555554

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.26  E-value=0.055  Score=45.49  Aligned_cols=102  Identities=14%  Similarity=0.135  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH------H-------------HHHHHHHHh---CCC-eeEecCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK------E-------------KVNLLKNKF---GFD-DAFNYKK  212 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~------~-------------~~~~~~~~~---g~~-~vi~~~~  212 (347)
                      +..+|+|.|. ||+|.+++..+...|. +++.++.+.      +             |.+.+++..   ... ++--.+.
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            4578999996 9999999999999998 666665321      1             222222111   111 1111111


Q ss_pred             hhhHHHHHHHHCCCCccEEEECCCc-h-hHHHHHHhhccCCEEEEEcccc
Q 019042          213 EPDLDAALKRCFPEGIDIYFENVGG-K-MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       213 ~~~~~~~i~~~~~~~~d~vid~~g~-~-~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      . -..+.+.++..+++|+|+||... . -...+..|.+.+=.++..+...
T Consensus       108 f-~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag  156 (263)
T COG1179         108 F-ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG  156 (263)
T ss_pred             h-hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence            1 12234555555689999999987 2 3344444666666666666543

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.24  E-value=0.21  Score=41.37  Aligned_cols=103  Identities=17%  Similarity=0.236  Sum_probs=64.8

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ....+.++++|+=.|  .|.|..++.+++.. +.+|++++.+++..+.+++   .++...+ ..... |..+.+..+.. 
T Consensus        34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v-~~~~~-d~~~~~~~~~~-  108 (196)
T PRK07402         34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNV-EVIEG-SAPECLAQLAP-  108 (196)
T ss_pred             HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCe-EEEEC-chHHHHhhCCC-
Confidence            445778889988887  45677777777664 5799999999987777663   2454321 11111 33333332222 


Q ss_pred             CccE-EEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDI-YFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~-vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+|. .++....  ..+..+.+.|+++|+++....
T Consensus       109 ~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        109 APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence            2344 4543322  467888899999999987744

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.22  E-value=0.04  Score=48.07  Aligned_cols=79  Identities=16%  Similarity=0.172  Sum_probs=48.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHhC----CC-e--eEecCChhhHH----HHHHHHC--
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKNKFG----FD-D--AFNYKKEPDLD----AALKRCF--  224 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~~~g----~~-~--vi~~~~~~~~~----~~i~~~~--  224 (347)
                      .+++|+||++++|...++.+...|++|+++.+. +++.+.+.+++.    .. .  ..|..+.+.+.    +.+....  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            478999999999999999999999999988653 444443332332    11 1  23443331221    1222211  


Q ss_pred             CCCccEEEECCCc
Q 019042          225 PEGIDIYFENVGG  237 (347)
Q Consensus       225 ~~~~d~vid~~g~  237 (347)
                      .+++|++|.++|.
T Consensus        82 ~g~iD~lv~nAG~   94 (267)
T TIGR02685        82 FGRCDVLVNNASA   94 (267)
T ss_pred             cCCceEEEECCcc
Confidence            1369999999873

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.036  Score=47.00  Aligned_cols=74  Identities=15%  Similarity=0.203  Sum_probs=51.2

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCC-ee--EecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          162 YVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF--GFD-DA--FNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~v--i~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|+|++|++|...++.+...|++|++++++.++.+.+.+.+  +.. +.  .|..+.+++.+.+.+.  +.+|++|.+.|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            58999999999999999899999999999877665544233  221 22  3444442444444432  35899999887


Q ss_pred             c
Q 019042          237 G  237 (347)
Q Consensus       237 ~  237 (347)
                      .
T Consensus        79 ~   79 (230)
T PRK07041         79 D   79 (230)
T ss_pred             C
Confidence            3

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.20  E-value=0.035  Score=47.12  Aligned_cols=102  Identities=19%  Similarity=0.253  Sum_probs=72.7

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ...++.+|++|+=.|  -|.|.+++.+|++.|-  +|+.....++..+.+++.+   |....+..... |..+.+-.   
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~~---  161 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGIDE---  161 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-cccccccc---
Confidence            457999999998877  4679999999998865  9999999999888777544   43332222222 33222211   


Q ss_pred             CCccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ..+|.+|=-...  ..+..+.+.|+++|.++.+..
T Consensus       162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence            168887655554  588999999999999998854

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.20  E-value=0.041  Score=48.71  Aligned_cols=96  Identities=17%  Similarity=0.108  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHhCC---C---eeEecCChhhHHHHHHHHCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSK---EKVNLLKNKFGF---D---DAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~---~~~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ++.+++|+|+ ||+|.+++..+...|++ |+++.++.   ++.+.+.+++..   .   ...+..+.    +.+.+.. .
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~----~~~~~~~-~  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDT----EKLKAEI-A  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhh----hHHHhhh-c
Confidence            5789999997 89999999888889995 99999885   454444324421   1   11222221    1222211 1


Q ss_pred             CccEEEECCCchh------HHH-HHHhhccCCEEEEEcc
Q 019042          227 GIDIYFENVGGKM------LDA-VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~~g~~~------~~~-~~~~l~~~G~~v~~g~  258 (347)
                      .+|++|+|+.-..      ... ....+.++..+..+-.
T Consensus       199 ~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  237 (289)
T PRK12548        199 SSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVY  237 (289)
T ss_pred             cCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecC
Confidence            3799999885211      000 1245666666666644

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=96.18  E-value=0.058  Score=47.06  Aligned_cols=105  Identities=11%  Similarity=0.143  Sum_probs=68.2

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCc
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      +....++.++.+||=+|+  |.|..+..+++..+++|++++.+++-.+.+++.......+..... |+.+.  ....+.+
T Consensus        44 ~l~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~~--~~~~~~F  118 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILKK--DFPENTF  118 (263)
T ss_pred             HHHhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-CcccC--CCCCCCe
Confidence            334568889999999984  456667778877789999999999887877743332111211111 22110  0112369


Q ss_pred             cEEEECC-----C--c--hhHHHHHHhhccCCEEEEEcc
Q 019042          229 DIYFENV-----G--G--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       229 d~vid~~-----g--~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |+|+...     .  .  ..+..+.+.|+|+|+++....
T Consensus       119 D~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        119 DMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9998621     1  1  267888899999999997654

>PLN02366 spermidine synthase

Probab=96.18  E-value=0.066  Score=47.67  Aligned_cols=98  Identities=16%  Similarity=0.114  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC------CeeEecCChhhHHHHHHHHCCCCc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGF------DDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      ...++||+.|+  |-|.++..++++-+. +|+++.-+++-.+.+++.+..      +.-+..... |..+-+++..++.+
T Consensus        90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y  166 (308)
T PLN02366         90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY  166 (308)
T ss_pred             CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence            45689999994  447778888887665 899999888767777733421      111111111 43344444333479


Q ss_pred             cEEEECCCc-----------hhHHHHHHhhccCCEEEEE
Q 019042          229 DIYFENVGG-----------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       229 d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~  256 (347)
                      |+||--...           +.++.+.++|+++|.++.-
T Consensus       167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            998754322           2467788899999999754

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.18  E-value=0.052  Score=50.26  Aligned_cols=91  Identities=18%  Similarity=0.173  Sum_probs=58.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-C-EEEEEeCCHHHHHHHHHHh-CC---CeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          161 VYVSAASGAVGQLVGQFAKLVG-C-YVVGSAGSKEKVNLLKNKF-GF---DDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G-~-~V~~~~~~~~~~~~~~~~~-g~---~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      |+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++ +.   ...+|..+.   . .+.++.. +.|+||+|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~---~-~l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP---E-SLAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH---H-HHHHHHT-TSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH---H-HHHHHHh-cCCEEEEC
Confidence            789998 999999999998875 4 8999999999977776332 22   123454443   2 2443332 37999999


Q ss_pred             CCch-hHHHHHHhhccCCEEEEEc
Q 019042          235 VGGK-MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       235 ~g~~-~~~~~~~~l~~~G~~v~~g  257 (347)
                      +|.. ...-+-.|++.+-+++...
T Consensus        75 ~gp~~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred             CccchhHHHHHHHHHhCCCeeccc
Confidence            9975 4445555778888888843

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.17  E-value=0.052  Score=43.01  Aligned_cols=94  Identities=22%  Similarity=0.212  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      .++.+++|+|+ |++|...++.+...| .+|++..++.++.+.+.++++... .....   +..+.+     +++|+|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence            45789999996 999999999988886 689999998887766553666421 01111   222221     35999999


Q ss_pred             CCCchhH-----HHHHHhhccCCEEEEEcc
Q 019042          234 NVGGKML-----DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       234 ~~g~~~~-----~~~~~~l~~~G~~v~~g~  258 (347)
                      |++....     ......++++..++.++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            9876421     112244677777777755

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.16  E-value=0.035  Score=47.49  Aligned_cols=79  Identities=24%  Similarity=0.300  Sum_probs=49.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHH---HhCCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKN---KFGFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ..+++|+|++|++|...++.+...|.+|+++.++.. ..+.+.+   ..+.. +  ..|..+.+++.+.+.+...  +++
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   85 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999888666543 2222221   22221 1  2344443234443333321  368


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |.+|.+.|
T Consensus        86 d~vi~~ag   93 (249)
T PRK12825         86 DILVNNAG   93 (249)
T ss_pred             CEEEECCc
Confidence            99999887

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.13  E-value=0.018  Score=50.71  Aligned_cols=148  Identities=20%  Similarity=0.205  Sum_probs=81.9

Q ss_pred             CCCCCCCEEEeccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHH
Q 019042           95 PNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLV  174 (347)
Q Consensus        95 ~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a  174 (347)
                      +.+++|++.+....|.+|-.-+.+. ++.++| +  ++|--..=+ +...+...|.+  -..+|++||=.|.  |.|.++
T Consensus       106 ~P~~vg~~~~I~P~w~~~~~~~~~~-~I~idP-g--~AFGTG~H~-TT~lcl~~l~~--~~~~g~~vLDvG~--GSGILa  176 (295)
T PF06325_consen  106 KPIRVGDRLVIVPSWEEYPEPPDEI-VIEIDP-G--MAFGTGHHP-TTRLCLELLEK--YVKPGKRVLDVGC--GSGILA  176 (295)
T ss_dssp             --EEECTTEEEEETT----SSTTSE-EEEEST-T--SSS-SSHCH-HHHHHHHHHHH--HSSTTSEEEEES---TTSHHH
T ss_pred             ccEEECCcEEEECCCcccCCCCCcE-EEEECC-C--CcccCCCCH-HHHHHHHHHHH--hccCCCEEEEeCC--cHHHHH
Confidence            4477899888888888883323333 677744 3  332111001 11223334433  3567899999984  556666


Q ss_pred             HHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCC-eeEecCChhhHHHHHHHHCCCCccEEEECCCch----hHHHHHH
Q 019042          175 GQFAKLVGC-YVVGSAGSKEKVNLLKNKF---GFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK----MLDAVLL  245 (347)
Q Consensus       175 ~qla~~~G~-~V~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~----~~~~~~~  245 (347)
                      +..++ +|+ +|++++-++.-.+.+++..   |.. .+.-.... +.       ..+.+|+|+-+.-..    ......+
T Consensus       177 iaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~~-------~~~~~dlvvANI~~~vL~~l~~~~~~  247 (295)
T PF06325_consen  177 IAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-DL-------VEGKFDLVVANILADVLLELAPDIAS  247 (295)
T ss_dssp             HHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-CT-------CCS-EEEEEEES-HHHHHHHHHHCHH
T ss_pred             HHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-cc-------ccccCCEEEECCCHHHHHHHHHHHHH
Confidence            65555 588 8999998887665555321   111 11111111 11       114699999888764    3445566


Q ss_pred             hhccCCEEEEEcccc
Q 019042          246 NMRIHGRIAVCGMIS  260 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~  260 (347)
                      +++++|.++..|...
T Consensus       248 ~l~~~G~lIlSGIl~  262 (295)
T PF06325_consen  248 LLKPGGYLILSGILE  262 (295)
T ss_dssp             HEEEEEEEEEEEEEG
T ss_pred             hhCCCCEEEEccccH
Confidence            899999999998754

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.13  E-value=0.076  Score=44.19  Aligned_cols=48  Identities=23%  Similarity=0.245  Sum_probs=41.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF  204 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~  204 (347)
                      -+|.+++|+|. |.+|..+++.+...|++|++.+++.++.+.+.+.+|+
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~   73 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGA   73 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCC
Confidence            35789999995 9999999999999999999999998887777645565

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.12  E-value=0.043  Score=46.80  Aligned_cols=70  Identities=20%  Similarity=0.297  Sum_probs=50.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHhCCCee-EecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE--KVNLLKNKFGFDDA-FNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      |+|+||+|.+|...++.+...+.+|.+.+|+..  ..+.++ ..|+..+ .|+.+.    +.+.+... ++|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~----~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDP----ESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-H----HHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCH----HHHHHHHc-CCceEEeecC
Confidence            789999999999999999998999999999864  345566 6787432 334333    23332222 5999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.11  E-value=0.029  Score=49.42  Aligned_cols=75  Identities=11%  Similarity=-0.047  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ++.+++|+|+ |+.|.+++.-+...|+ +|+++.|+.+|.+.+.++++... +.....   + +.+.... ..+|+||+|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~-~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---D-SGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---h-hhhhhcc-cCCCEEEEC
Confidence            5789999996 9999999999999998 79999999888777664554321 111111   0 1111111 248999999


Q ss_pred             CCc
Q 019042          235 VGG  237 (347)
Q Consensus       235 ~g~  237 (347)
                      +..
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            874

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.11  E-value=0.052  Score=48.92  Aligned_cols=76  Identities=13%  Similarity=0.114  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHhCCC--e--eEecCChhhHHHHHHHHCCCCccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKFGFD--D--AFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~g~~--~--vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      +|.+|||+||+|.+|...++.+...|  .+|++++++..+...+.+.+...  .  ..|..+.+++.+.+.     ++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-----~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-----GVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-----cCCE
Confidence            36789999999999999888887765  68998887765544333233221  1  124444312323222     4899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      ||.++|.
T Consensus        78 Vih~Ag~   84 (324)
T TIGR03589        78 VVHAAAL   84 (324)
T ss_pred             EEECccc
Confidence            9998873

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.10  E-value=0.042  Score=47.23  Aligned_cols=78  Identities=18%  Similarity=0.147  Sum_probs=48.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHH---HhCCC-ee--EecCChhhHHHHHHHHCC--CCcc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKN---KFGFD-DA--FNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~---~~g~~-~v--i~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++++|+|++|++|...++.+.+.|++|+++. +++++.+.+.+   ..+.. ..  .|..+..++.+.+.++..  +.+|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999987765 44444333221   22322 11  233333233333333321  3689


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.++|
T Consensus        83 ~li~~ag   89 (248)
T PRK06947         83 ALVNNAG   89 (248)
T ss_pred             EEEECCc
Confidence            9999887

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.09  E-value=0.045  Score=47.90  Aligned_cols=91  Identities=13%  Similarity=0.007  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCe----eEecCChhhHHHHHHHHCCC-Ccc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDD----AFNYKKEPDLDAALKRCFPE-GID  229 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~~~-~~d  229 (347)
                      .++++++|.|| ||.+.+++.-++..|+ +++++.|+.+|.+.+.+.++...    .....+.          ... .+|
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~----------~~~~~~d  192 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADL----------EGLEEAD  192 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccc----------ccccccC
Confidence            35799999996 9999999999999997 89999999999877775565321    1111111          001 389


Q ss_pred             EEEECCCch--h-----HHHHHHhhccCCEEEEEcc
Q 019042          230 IYFENVGGK--M-----LDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       230 ~vid~~g~~--~-----~~~~~~~l~~~G~~v~~g~  258 (347)
                      ++|+|+.-.  .     .-. ..++++.-.+..+-.
T Consensus       193 liINaTp~Gm~~~~~~~~~~-~~~l~~~~~v~D~vY  227 (283)
T COG0169         193 LLINATPVGMAGPEGDSPVP-AELLPKGAIVYDVVY  227 (283)
T ss_pred             EEEECCCCCCCCCCCCCCCc-HHhcCcCCEEEEecc
Confidence            999988632  1     111 456666666666654

>PLN03075 nicotianamine synthase; Provisional

Probab=96.09  E-value=0.063  Score=47.21  Aligned_cols=97  Identities=10%  Similarity=0.020  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCC----CeeEecCChhhHHHHHHHHCCCCccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGF----DDAFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      ++++|+-+| +|..++.++.+++.+  +.+++.++.+++..+.+++.+..    ..-+.+... |..+....  .++||+
T Consensus       123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl  198 (296)
T PLN03075        123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV  198 (296)
T ss_pred             CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence            778999999 688999888888765  55899999999988888744422    222333322 33221111  136999


Q ss_pred             EEECC------Cc--hhHHHHHHhhccCCEEEEEc
Q 019042          231 YFENV------GG--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       231 vid~~------g~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ||-.+      ..  ..+....+.|++||.++.-.
T Consensus       199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            98764      12  37889999999999988554

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.063  Score=45.31  Aligned_cols=76  Identities=13%  Similarity=0.195  Sum_probs=50.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee--EecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .+++|+|++|++|...+..+... .+|++++++.++.+.+.+.....++  .|..+..++.+.+...  +++|.+|.+.|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag   80 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG   80 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            57999999999999888877777 9999999998776655523322222  3333331233333221  25999999987


Q ss_pred             c
Q 019042          237 G  237 (347)
Q Consensus       237 ~  237 (347)
                      .
T Consensus        81 ~   81 (227)
T PRK08219         81 V   81 (227)
T ss_pred             c
Confidence            4

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.08  E-value=0.17  Score=36.43  Aligned_cols=86  Identities=19%  Similarity=0.177  Sum_probs=58.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC---CEEEEE-eCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVG---CYVVGS-AGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G---~~V~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +|.|+| .|.+|.+.+.-+...|   .+|+.+ .+++++.+.+.++++...+. .    +..+.+++     .|+||-|+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~----~~~~~~~~-----advvilav   69 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-D----DNEEAAQE-----ADVVILAV   69 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-E----EHHHHHHH-----TSEEEE-S
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-C----ChHHhhcc-----CCEEEEEE
Confidence            477888 5999999999999999   789955 99999888887577754221 1    23334433     79999999


Q ss_pred             CchhHHHHHHh---hccCCEEEEE
Q 019042          236 GGKMLDAVLLN---MRIHGRIAVC  256 (347)
Q Consensus       236 g~~~~~~~~~~---l~~~G~~v~~  256 (347)
                      -...+...++.   ..++..++++
T Consensus        70 ~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   70 KPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCEEEEe
Confidence            87655554443   4556666655

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.07  E-value=0.13  Score=45.15  Aligned_cols=107  Identities=17%  Similarity=0.191  Sum_probs=71.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CC---CeeEecCChhhH---HHHHHHHCCC-C
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF-GF---DDAFNYKKEPDL---DAALKRCFPE-G  227 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~-g~---~~vi~~~~~~~~---~~~i~~~~~~-~  227 (347)
                      ..+..|+|+|..+|.|..++.-+...|++|++.|-.++..+.++.+. ..   .-.+|..+++++   .+.+++..++ +
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            35678999999999999999999999999999997777666665222 11   123555554233   3344555554 6


Q ss_pred             ccEEEECCCch---------------------------hHHHHHHhhcc-CCEEEEEcccccc
Q 019042          228 IDIYFENVGGK---------------------------MLDAVLLNMRI-HGRIAVCGMISQY  262 (347)
Q Consensus       228 ~d~vid~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~~  262 (347)
                      .=-+++++|-.                           .....+.++++ .||+|.+++..+.
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence            66788888711                           12334445555 5999999987664

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.064  Score=46.05  Aligned_cols=80  Identities=16%  Similarity=0.175  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +.+++|+|++|++|...++.+...|++|+... +++++.+.+.+   ..+...   ..|..+...+.+.+.+...  +.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            45899999999999999988888999887765 44444333321   233321   2344443234444443322  368


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (248)
T PRK06123         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.07  E-value=0.049  Score=44.51  Aligned_cols=39  Identities=23%  Similarity=0.196  Sum_probs=32.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      +|.|.|+ |.+|...++++...|.+|+..+.+++.++..+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~   39 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERAR   39 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence            5889996 99999999988888999999999998766655

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.07  E-value=0.041  Score=49.17  Aligned_cols=81  Identities=19%  Similarity=0.190  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHC-CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCF-PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~-~~~~  228 (347)
                      ++.+++|+|+++++|...++.+...|++|++.+++. .+.+.+.+   ..|...   ..|..+.++..+.+.... .+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999887642 23222221   234321   123333312222222211 2469


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.++|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.07  E-value=0.093  Score=46.19  Aligned_cols=46  Identities=20%  Similarity=0.135  Sum_probs=38.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKF  202 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~  202 (347)
                      .++++++|.|+ ||.+.+++.-+...|+ +++++.++.+|.+.+.+.+
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            34789999996 9999999998888998 7999999988877665454

>PRK04457 spermidine synthase; Provisional

Probab=96.05  E-value=0.39  Score=41.80  Aligned_cols=97  Identities=10%  Similarity=0.137  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCCCCccEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      .++.+||++|.  |.|.++..+++.. +.+++++..+++-.+.+++.++..   .-+..... |..+.+.+. ++.+|+|
T Consensus        65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence            35678999994  5588888888877 569999999999888888555531   11111112 444444432 3469998


Q ss_pred             E-ECCC----------chhHHHHHHhhccCCEEEEE
Q 019042          232 F-ENVG----------GKMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       232 i-d~~g----------~~~~~~~~~~l~~~G~~v~~  256 (347)
                      + |...          .+.+..+.++|+++|.++.-
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            6 3221          13577888899999999863

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.05  E-value=0.056  Score=45.17  Aligned_cols=92  Identities=20%  Similarity=0.146  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .|.+|+|.|+ |.+|..-++.+...|++|++++.... ....+. +.|--..+. .   ++....  +  .++++||-+.
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~---~~~~~d--l--~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-R---CFDADI--L--EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-C---CCCHHH--h--CCcEEEEECC
Confidence            4679999996 99999999999999999999886543 233333 333211111 1   221111  1  2589999999


Q ss_pred             Cch-hHHHHHHhhccCCEEEEEcc
Q 019042          236 GGK-MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~-~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.. .-.......+..|..|....
T Consensus        78 ~d~~ln~~i~~~a~~~~ilvn~~d  101 (205)
T TIGR01470        78 DDEELNRRVAHAARARGVPVNVVD  101 (205)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEECC
Confidence            986 44445556667788776544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.03  E-value=0.048  Score=46.73  Aligned_cols=79  Identities=15%  Similarity=0.105  Sum_probs=50.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHH---HhCCC---eeEecCChhhHHHHHHHHC--CCCcc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKN---KFGFD---DAFNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      ++++|+|++|++|...+..+...|++|+++ .+++++.+....   ..+..   ...|..+.+++.+.+.+..  .+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            379999999999999999998899998875 455554332221   22321   1234444424444444432  23789


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.02  E-value=0.09  Score=43.53  Aligned_cols=87  Identities=15%  Similarity=0.133  Sum_probs=56.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch-
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-  238 (347)
                      +++|+|++|++|...+..+... .+|+.+.++...           ...|..+.+++.+.+.+.  +++|+++.+.|.. 
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~--~~id~lv~~ag~~~   67 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKV--GKVDAVVSAAGKVH   67 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhc--CCCCEEEECCCCCC
Confidence            6899999999998888877766 899998876431           123444432333333332  3589999888731 


Q ss_pred             -------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          239 -------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       239 -------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                                               ..+.+.+.++++|+++.++...
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~  114 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL  114 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence                                     1223334556778888877643

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.01  E-value=0.099  Score=45.93  Aligned_cols=151  Identities=21%  Similarity=0.205  Sum_probs=89.1

Q ss_pred             CCCCCCCEEEeccCcceeEeecCCCcceeccCCCCCccccccccCCchhhH--HHHhhhhcCCCCCCEEEEEcCCChHHH
Q 019042           95 PNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTA--YGGLYELCSPKKGEYVYVSAASGAVGQ  172 (347)
Q Consensus        95 ~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA--~~~l~~~~~~~~~~~vlI~ga~g~vG~  172 (347)
                      .-.++|++.+...+|.+|..-. +..++++|| +  ++|--   .....|+  ..+|.+  ..++|.+|+=.|.  |.|.
T Consensus       107 ~P~rig~~f~I~Psw~~~~~~~-~~~~i~lDP-G--lAFGT---G~HpTT~lcL~~Le~--~~~~g~~vlDvGc--GSGI  175 (300)
T COG2264         107 HPVRIGERFVIVPSWREYPEPS-DELNIELDP-G--LAFGT---GTHPTTSLCLEALEK--LLKKGKTVLDVGC--GSGI  175 (300)
T ss_pred             CcEEeeeeEEECCCCccCCCCC-CceEEEEcc-c--cccCC---CCChhHHHHHHHHHH--hhcCCCEEEEecC--ChhH
Confidence            4478899988888888875443 333778744 3  33311   1122333  334433  4558999999984  5576


Q ss_pred             HHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeE--ecCChhhHHHHHHHHCCCCccEEEECCCch----hHHHHHH
Q 019042          173 LVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAF--NYKKEPDLDAALKRCFPEGIDIYFENVGGK----MLDAVLL  245 (347)
Q Consensus       173 ~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi--~~~~~~~~~~~i~~~~~~~~d~vid~~g~~----~~~~~~~  245 (347)
                      +++-.++ +|+ +|++++-++...+.+++..-...+-  ......+.   ......+.+|+|+-++=..    ......+
T Consensus       176 LaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~---~~~~~~~~~DvIVANILA~vl~~La~~~~~  251 (300)
T COG2264         176 LAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLL---LEVPENGPFDVIVANILAEVLVELAPDIKR  251 (300)
T ss_pred             HHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccc---hhhcccCcccEEEehhhHHHHHHHHHHHHH
Confidence            6665544 677 7999999887666666322111110  00000011   1111223799999877322    5566778


Q ss_pred             hhccCCEEEEEcccc
Q 019042          246 NMRIHGRIAVCGMIS  260 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~  260 (347)
                      +++++|+++..|...
T Consensus       252 ~lkpgg~lIlSGIl~  266 (300)
T COG2264         252 LLKPGGRLILSGILE  266 (300)
T ss_pred             HcCCCceEEEEeehH
Confidence            999999999988743

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.01  E-value=0.078  Score=46.37  Aligned_cols=95  Identities=18%  Similarity=0.127  Sum_probs=67.4

Q ss_pred             ccCCchhhHHHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          137 ILGMPGLTAYGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      -+|++....+..|.. .++ -.|++|+|.|.+.-+|.-.+.++...|+.|+...+..                    . +
T Consensus       137 ~~PcTp~aii~lL~~-~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t--------------------~-~  194 (285)
T PRK14189        137 FRPCTPYGVMKMLES-IGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT--------------------R-D  194 (285)
T ss_pred             CcCCCHHHHHHHHHH-cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC--------------------C-C
Confidence            346555555555543 343 3799999999877889999999999999998754221                    1 3


Q ss_pred             HHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.+.+++     .|+|+-++|.+.+-.. +.++++-.++.+|..
T Consensus       195 l~~~~~~-----ADIVV~avG~~~~i~~-~~ik~gavVIDVGin  232 (285)
T PRK14189        195 LAAHTRQ-----ADIVVAAVGKRNVLTA-DMVKPGATVIDVGMN  232 (285)
T ss_pred             HHHHhhh-----CCEEEEcCCCcCccCH-HHcCCCCEEEEcccc
Confidence            3333433     8999999998644222 789999999999874

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.042  Score=47.58  Aligned_cols=81  Identities=16%  Similarity=0.179  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHH---HhCCC-e--eEecCChhhHHHHHHHHCC-
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS----KEKVNLLKN---KFGFD-D--AFNYKKEPDLDAALKRCFP-  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~----~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~-  225 (347)
                      .+.+++|+|++|++|...++.+...|++|++++++    .++.+.+.+   ..+.. .  ..|..+.++..+.+.+... 
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999899997766532    222222211   23432 1  2344443233333333221 


Q ss_pred             -CCccEEEECCCc
Q 019042          226 -EGIDIYFENVGG  237 (347)
Q Consensus       226 -~~~d~vid~~g~  237 (347)
                       +++|++|.+.|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence             368999999884

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.00  E-value=0.26  Score=44.17  Aligned_cols=40  Identities=18%  Similarity=0.037  Sum_probs=33.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      .+|.|+|+ |.+|...++.+...|.+|++.+.+++..+.++
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~   47 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALR   47 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            57999995 99999888888889999999999987655443

>PLN00016 RNA-binding protein; Provisional

Probab=95.99  E-value=0.071  Score=49.17  Aligned_cols=95  Identities=18%  Similarity=0.199  Sum_probs=61.0

Q ss_pred             CCEEEEE----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-----------HHHHhCCCeeEecCChhhHHHHHHH
Q 019042          158 GEYVYVS----AASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL-----------LKNKFGFDDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       158 ~~~vlI~----ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~-----------~~~~~g~~~vi~~~~~~~~~~~i~~  222 (347)
                      ..+|||+    ||+|.+|..++..+...|.+|++++++......           +. ..+... +..    |+.. +..
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~-v~~----D~~d-~~~  124 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKT-VWG----DPAD-VKS  124 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceE-EEe----cHHH-HHh
Confidence            4689999    999999999999998899999999987654221           11 223322 211    2222 222


Q ss_pred             HCCC-CccEEEECCCch--hHHHHHHhhccCC--EEEEEccc
Q 019042          223 CFPE-GIDIYFENVGGK--MLDAVLLNMRIHG--RIAVCGMI  259 (347)
Q Consensus       223 ~~~~-~~d~vid~~g~~--~~~~~~~~l~~~G--~~v~~g~~  259 (347)
                      .... ++|+|+++.+..  .....++.++..|  ++|.+++.
T Consensus       125 ~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        125 KVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             hhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            2222 699999998753  3445556555443  78877754

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.97  E-value=0.032  Score=46.38  Aligned_cols=98  Identities=13%  Similarity=0.049  Sum_probs=61.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ....++.+||-.|+  |.|..+..+++. |.+|++++.+++-.+.+++..   +... ++.... |+...   ..++.+|
T Consensus        26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~---~~~~~fD   97 (197)
T PRK11207         26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL---TFDGEYD   97 (197)
T ss_pred             cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC---CcCCCcC
Confidence            34556788999984  568888888875 889999999988666665222   2221 111111 22111   1123699


Q ss_pred             EEEECCCc---------hhHHHHHHhhccCCEEEEEcc
Q 019042          230 IYFENVGG---------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       230 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+.+..-         ..+....+.|+++|.++.+..
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~  135 (197)
T PRK11207         98 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA  135 (197)
T ss_pred             EEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence            99875431         256778889999999765543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.96  E-value=0.04  Score=48.58  Aligned_cols=95  Identities=11%  Similarity=0.083  Sum_probs=61.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC-CC-ccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP-EG-IDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~-~~-~d~vid~~g  236 (347)
                      +|+|+||+|.+|..+++.+...|.+|.++++++++..    ..+.. ...|+.+.+.+.+.++.... .+ +|.++-+.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999989999999999876532    22332 23566655344444432111 25 899987776


Q ss_pred             ch-----hHHHHHHhhccCC--EEEEEcc
Q 019042          237 GK-----MLDAVLLNMRIHG--RIAVCGM  258 (347)
Q Consensus       237 ~~-----~~~~~~~~l~~~G--~~v~~g~  258 (347)
                      ..     .....++.++..|  ++|.++.
T Consensus        77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            31     2334455555554  6777754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12827 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.052  Score=46.57  Aligned_cols=81  Identities=20%  Similarity=0.231  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC-
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG----SKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP-  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~----~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~-  225 (347)
                      ++.+++|+|++|++|...+..+...|++|+++.+    +.++.+.+.+++   +.. .  ..|..+.+.+.+.+.++.. 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999988889999988654    333333222122   322 1  2333333233333333221 


Q ss_pred             -CCccEEEECCCc
Q 019042          226 -EGIDIYFENVGG  237 (347)
Q Consensus       226 -~~~d~vid~~g~  237 (347)
                       +++|.+|.+.|.
T Consensus        85 ~~~~d~vi~~ag~   97 (249)
T PRK12827         85 FGRLDILVNNAGI   97 (249)
T ss_pred             hCCCCEEEECCCC
Confidence             368999999874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.93  E-value=0.035  Score=50.00  Aligned_cols=75  Identities=16%  Similarity=0.248  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC---Cee--EecCChhhHHHHHHHHCCCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF---DDA--FNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~---~~v--i~~~~~~~~~~~i~~~~~~~~  228 (347)
                      .+.++||+||+|.+|..++..+...|++|++++++..+.+.....+   +.   ...  .|..+.+++.+.+.     ++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~   78 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-----GC   78 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----CC
Confidence            4679999999999999999999999999988877655433222111   11   111  23333312333332     48


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |+||.+++
T Consensus        79 d~vih~A~   86 (325)
T PLN02989         79 ETVFHTAS   86 (325)
T ss_pred             CEEEEeCC
Confidence            99999887

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.91  E-value=0.06  Score=49.07  Aligned_cols=81  Identities=14%  Similarity=0.087  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCChHHHH--HHHHHHHCCCEEEEEeCCH--HH--------------HHHHHHHhCCC-eeE--ecCChh
Q 019042          156 KKGEYVYVSAASGAVGQL--VGQFAKLVGCYVVGSAGSK--EK--------------VNLLKNKFGFD-DAF--NYKKEP  214 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~--a~qla~~~G~~V~~~~~~~--~~--------------~~~~~~~~g~~-~vi--~~~~~~  214 (347)
                      ..++++||+|+++++|++  .++.+ ..|++|+++....  .+              .+.++ +.|.. ..+  |..+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence            346899999999999999  55666 8899988887322  11              12333 55643 223  333321


Q ss_pred             hHHHHHHHHCC--CCccEEEECCCch
Q 019042          215 DLDAALKRCFP--EGIDIYFENVGGK  238 (347)
Q Consensus       215 ~~~~~i~~~~~--~~~d~vid~~g~~  238 (347)
                      ...+.+.++..  |++|+++.+++..
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            33333333322  4699999999854

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.91  E-value=0.056  Score=46.82  Aligned_cols=79  Identities=14%  Similarity=0.147  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCC-----------HHHH----HHHHHHhCCC-e--eEecCChhhH
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS-----------KEKV----NLLKNKFGFD-D--AFNYKKEPDL  216 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~-----------~~~~----~~~~~~~g~~-~--vi~~~~~~~~  216 (347)
                      +|.+++|+|++  +++|...+..+...|++|++++++           .++.    +.++ +.|.. .  ..|..+.+++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence            57899999997  489999999999999999887532           1211    1122 33442 1  2344443244


Q ss_pred             HHHHHHHCC--CCccEEEECCC
Q 019042          217 DAALKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       217 ~~~i~~~~~--~~~d~vid~~g  236 (347)
                      .+.+.+...  +.+|++|.+.|
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag  105 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAA  105 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCC
Confidence            444443322  35899999887

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.91  E-value=0.065  Score=45.83  Aligned_cols=79  Identities=16%  Similarity=0.160  Sum_probs=49.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHhC---CC-e--eEecCChhhHHHHHHHHC--CCCcc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKNKFG---FD-D--AFNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~~~g---~~-~--vi~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      ++++|+|++|++|..+++.+...|++|+++.++.. ..+.....+.   .. .  ..|..+.+.+.+.+.+..  .+.+|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47999999999999999998888999999998743 1221211222   11 1  233333323333333322  13689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12824         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.89  E-value=0.11  Score=43.39  Aligned_cols=92  Identities=9%  Similarity=0.011  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .|.+|+|.|+ |.+|...+..+...|++|+++..... .+..+. .-+.   +.+... .+.+..  +  .++|+||-|+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~---i~~~~~-~~~~~~--l--~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK---IRWKQK-EFEPSD--I--VDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC---EEEEec-CCChhh--c--CCceEEEEcC
Confidence            4679999996 99999999888889999998875432 222221 1121   111111 111110  1  2589999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEcc
Q 019042          236 GGKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+.++..+...+..+.++....
T Consensus        79 ~d~elN~~i~~~a~~~~lvn~~d  101 (202)
T PRK06718         79 NDPRVNEQVKEDLPENALFNVIT  101 (202)
T ss_pred             CCHHHHHHHHHHHHhCCcEEECC
Confidence            98777776665555566665543

>PRK07023 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.055  Score=46.36  Aligned_cols=76  Identities=18%  Similarity=0.170  Sum_probs=49.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHH-----HCC-CCccE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKR-----CFP-EGIDI  230 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~-----~~~-~~~d~  230 (347)
                      +++|+|++|++|...++.+...|++|++++++.++ +... ..+..   ...|..+.+++.+.+.+     +.. +..|+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-SLAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-hhhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            69999999999999999998899999999887654 2222 33432   12444443234332322     111 25788


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +|.+.|.
T Consensus        81 ~v~~ag~   87 (243)
T PRK07023         81 LINNAGT   87 (243)
T ss_pred             EEEcCcc
Confidence            8888763

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.86  E-value=0.041  Score=51.01  Aligned_cols=106  Identities=19%  Similarity=0.149  Sum_probs=65.1

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHh-CCC-eeEecCChhhHHHHHHHHC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN------LLKNKF-GFD-DAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~------~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~  224 (347)
                      .+...+.+|+|+||+|.+|..++..+...|.+|++++++..+.+      ...... +.. ...|..+.+++.+.+... 
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-  133 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-  133 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-
Confidence            34456789999999999999999999889999999998765421      111011 222 123554442344444432 


Q ss_pred             CCCccEEEECCCch------h-------HHHHHHhhccC--CEEEEEccc
Q 019042          225 PEGIDIYFENVGGK------M-------LDAVLLNMRIH--GRIAVCGMI  259 (347)
Q Consensus       225 ~~~~d~vid~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~  259 (347)
                      +.++|+||.|.+..      .       ...+++.++..  +++|.++..
T Consensus       134 ~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        134 GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            11599999988631      1       12333444333  478877754

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.86  E-value=0.098  Score=46.77  Aligned_cols=89  Identities=17%  Similarity=0.249  Sum_probs=61.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .+|.|+| .|.+|...+..++..|.  +|++.++++++.+.++ +.|......  .  +..+.+     ..+|+||.|+.
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~--~--~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT--T--SAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec--C--CHHHHh-----cCCCEEEECCC
Confidence            5799999 59999999998888885  8999999998888887 777532111  1  222222     24899999997


Q ss_pred             chh----HHHHHHhhccCCEEEEEcc
Q 019042          237 GKM----LDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~~~----~~~~~~~l~~~G~~v~~g~  258 (347)
                      ...    +......++++..++.++.
T Consensus        76 ~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            643    2333345667777766665

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.85  E-value=0.11  Score=43.87  Aligned_cols=94  Identities=19%  Similarity=0.230  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      -+|.+||=.|+.|  |+++.-+| ..|++|++++-+++-.+.++ .-...  -.+||...  ..+.+... ++.||+|++
T Consensus        58 l~g~~vLDvGCGg--G~Lse~mA-r~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~--~~edl~~~-~~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCGG--GILSEPLA-RLGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA--TVEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCCc--cHhhHHHH-HCCCeeEEecCChHHHHHHH-Hhhhhccccccchhh--hHHHHHhc-CCCccEEEE
Confidence            3678899999644  45444444 47899999999999888876 22211  12556542  22233221 147999976


Q ss_pred             C-----CCc--hhHHHHHHhhccCCEEEEE
Q 019042          234 N-----VGG--KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       234 ~-----~g~--~~~~~~~~~l~~~G~~v~~  256 (347)
                      .     +..  ..+..+.++++|+|++...
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            3     333  3667788899999998754

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.83  E-value=0.072  Score=46.13  Aligned_cols=43  Identities=28%  Similarity=0.284  Sum_probs=33.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----CCCEEEEEeCCHHHHHHHHHHh
Q 019042          160 YVYVSAASGAVGQLVGQFAKL----VGCYVVGSAGSKEKVNLLKNKF  202 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~----~G~~V~~~~~~~~~~~~~~~~~  202 (347)
                      .++|+|+++++|...+..+..    .|++|+.+.++.++.+.+.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l   48 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI   48 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence            589999999999877765543    6999999999988766654343

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.82  E-value=0.14  Score=44.80  Aligned_cols=95  Identities=19%  Similarity=0.100  Sum_probs=66.9

Q ss_pred             ccCCchhhHHHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          137 ILGMPGLTAYGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      -+|++....+..|.. .++ -.|++|+|.|.+..+|.-++.++...|+.|++..+...                     +
T Consensus       136 ~~PcTp~avi~lL~~-~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~  193 (285)
T PRK14191        136 FVPATPMGVMRLLKH-YHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D  193 (285)
T ss_pred             CCCCcHHHHHHHHHH-hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence            346665555555543 344 36999999998779999999999999999987643221                     2


Q ss_pred             HHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.+.+++     +|+++-++|.+.+-. -+.++++..++.+|..
T Consensus       194 l~~~~~~-----ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~  231 (285)
T PRK14191        194 LSFYTQN-----ADIVCVGVGKPDLIK-ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHHHh-----CCEEEEecCCCCcCC-HHHcCCCcEEEEeecc
Confidence            3333332     899999999864422 3567999999999864

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.80  E-value=0.058  Score=42.75  Aligned_cols=81  Identities=21%  Similarity=0.233  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHhCCCeeEecCC---hhhHHHHHHHHCC--CCcc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-VNLLKNKFGFDDAFNYKK---EPDLDAALKRCFP--EGID  229 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-~~~~~~~~g~~~vi~~~~---~~~~~~~i~~~~~--~~~d  229 (347)
                      .+|-.-+|+|+.+++|.+++..+...|+.|+..+-..++ .+.++ ++|-.-+|...+   +.|....+.....  |..|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            456778999999999999999999999999988866554 35556 899866665432   1144444443333  2689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ..++|.|.
T Consensus        86 ~~vncagi   93 (260)
T KOG1199|consen   86 ALVNCAGI   93 (260)
T ss_pred             eeeeccce
Confidence            99999994

>PLN02244 tocopherol O-methyltransferase

Probab=95.79  E-value=0.078  Score=48.14  Aligned_cols=98  Identities=16%  Similarity=0.159  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      .++++||=+|  .|.|..+..+++..|++|++++.++...+.+++.   .+...-+..... |..+ + ....+.||+|+
T Consensus       117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~  191 (340)
T PLN02244        117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW  191 (340)
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence            6788999988  4678888889988899999999998876666521   232111111111 2111 0 01123699998


Q ss_pred             ECCCc-------hhHHHHHHhhccCCEEEEEcc
Q 019042          233 ENVGG-------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       233 d~~g~-------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .....       ..+..+.+.|++||++++...
T Consensus       192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            64331       267788899999999998654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.78  E-value=0.05  Score=48.89  Aligned_cols=38  Identities=24%  Similarity=0.308  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK  194 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~  194 (347)
                      .|.+|+|+||+|.+|...+..+...|.+|+++.++.++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTD   41 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            46899999999999999999888899999988887654

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.78  E-value=0.11  Score=45.48  Aligned_cols=91  Identities=12%  Similarity=0.033  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      +...+++++|.|+ ||.+.+++.-++..|+ +|+++.|+.++.+.+.+.++..          +...+.   ...+|+||
T Consensus       118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEE
Confidence            4445678999996 9999999999999998 7999999998877666355321          111111   12489999


Q ss_pred             ECCCchhH--------HHHHHhhccCCEEEEEcc
Q 019042          233 ENVGGKML--------DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       233 d~~g~~~~--------~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+.-...        ......+++...+..+-.
T Consensus       184 NaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY  217 (272)
T PRK12550        184 NVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVA  217 (272)
T ss_pred             ECCccccCCCCccccCCCCHHHcCCCCEEEEeec
Confidence            99852210        011234666666665544

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.75  E-value=0.06  Score=46.59  Aligned_cols=35  Identities=20%  Similarity=0.104  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      ++.+++|+||+  |++|...+..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            45789999997  489999888888889999999876

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.75  E-value=0.062  Score=42.78  Aligned_cols=43  Identities=21%  Similarity=0.243  Sum_probs=38.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      .|..|+++|+.-|+|+..++-+.+.|++|+++.+.++.+..+-
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV   48 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV   48 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence            5778999998779999999999999999999999998876665

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.75  E-value=0.11  Score=41.29  Aligned_cols=88  Identities=9%  Similarity=0.118  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|+|.|| |.+|..-++.+...|++|++++.  +..+.++ +++... ....   .+.+.  .+  .++|+|+-+++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp--~~~~~l~-~l~~i~-~~~~---~~~~~--dl--~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP--EICKEMK-ELPYIT-WKQK---TFSND--DI--KDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC--ccCHHHH-hccCcE-EEec---ccChh--cC--CCceEEEECCC
Confidence            4789999996 99999989888889999998853  3334444 444211 1111   22111  01  25899999999


Q ss_pred             chhHHHHHHhhccCCEEEEE
Q 019042          237 GKMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       237 ~~~~~~~~~~l~~~G~~v~~  256 (347)
                      .+..+..+...+..+.++..
T Consensus        80 d~e~N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         80 QHAVNMMVKQAAHDFQWVNV   99 (157)
T ss_pred             CHHHHHHHHHHHHHCCcEEE
Confidence            87666666655544444443

>PLN02686 cinnamoyl-CoA reductase

Probab=95.74  E-value=0.076  Score=48.78  Aligned_cols=44  Identities=16%  Similarity=0.127  Sum_probs=37.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      ..+++|||+||+|.+|..++..+...|++|+++.++.++.+.++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            45789999999999999999999999999998887766554443

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.73  E-value=0.096  Score=47.22  Aligned_cols=93  Identities=12%  Similarity=0.075  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHh----CCCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFA-KLVGC-YVVGSAGSKEKVNLLKNKF----GFDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla-~~~G~-~V~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ....+++|+|+ |+.|.+.+..+ ...++ +|.+..+++++.+.+.+++    +.. +..+.   ++.+.+.     ..|
T Consensus       125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD  194 (325)
T PRK08618        125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD  194 (325)
T ss_pred             CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence            34678999994 99998776554 44577 7888888888776555343    332 22232   4444443     389


Q ss_pred             EEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          230 IYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       230 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +|+.|+++...... ..+++|-+++.+|..
T Consensus       195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~  223 (325)
T PRK08618        195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSF  223 (325)
T ss_pred             EEEEccCCCCcchH-HhcCCCcEEEecCCC
Confidence            99999987533334 888999999999874

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.70  E-value=0.053  Score=46.49  Aligned_cols=105  Identities=16%  Similarity=0.226  Sum_probs=66.3

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHH-HHHHHHC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLD-AALKRCF  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~-~~i~~~~  224 (347)
                      ...++.||++|+=.|  .|.|.++..+++..|  .+|+....++++.+.+++.   .|....+..... |.. +.+.+-.
T Consensus        34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~  110 (247)
T PF08704_consen   34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEEL  110 (247)
T ss_dssp             HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-
T ss_pred             HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccc
Confidence            457999999998887  467888899998886  3999999999988777654   444322222111 221 1221111


Q ss_pred             CCCccEEEECCCc--hhHHHHHHhh-ccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG--KMLDAVLLNM-RIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~--~~~~~~~~~l-~~~G~~v~~g~  258 (347)
                      ...+|.||=-...  ..+..+.+.| +++|+++++..
T Consensus       111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            2358887554444  5899999999 89999998853

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.66  E-value=0.016  Score=42.54  Aligned_cols=86  Identities=19%  Similarity=0.286  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|.+|||.|+ |.+|..-++.+...|++|++++...   +..+   +.-.   .... .+.+.+     .++++|+-+.+
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~---~~~~-~~~~~l-----~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQ---LIRR-EFEEDL-----DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCE---EEES-S-GGGC-----TTESEEEE-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHH---HHhh-hHHHHH-----hhheEEEecCC
Confidence            4789999996 9999999999999999999999875   2222   2211   1111 331111     25999999998


Q ss_pred             chhHHH-HHHhhccCCEEEEEcc
Q 019042          237 GKMLDA-VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~~~~~~-~~~~l~~~G~~v~~g~  258 (347)
                      ...++. .....+..|.++....
T Consensus        70 d~~~n~~i~~~a~~~~i~vn~~D   92 (103)
T PF13241_consen   70 DPELNEAIYADARARGILVNVVD   92 (103)
T ss_dssp             -HHHHHHHHHHHHHTTSEEEETT
T ss_pred             CHHHHHHHHHHHhhCCEEEEECC
Confidence            865444 4445566899988865

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.64  E-value=0.082  Score=46.03  Aligned_cols=150  Identities=15%  Similarity=0.071  Sum_probs=94.3

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh----------hhHHHHHHHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE----------PDLDAALKRC  223 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~----------~~~~~~i~~~  223 (347)
                      ...++.++++.|+ |-.|++++-.++..|+-|+...-...+.+..+ ++|+...--.+++          ++|...-.++
T Consensus       160 gtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~  237 (356)
T COG3288         160 GTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL  237 (356)
T ss_pred             ccccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hcccccccccccccCCCccccCCHHHHHHHHHH
Confidence            4456678899996 99999999999999999999998888777777 7887432111110          2343332222


Q ss_pred             CC---CCccEEEECCC---ch----hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc--c
Q 019042          224 FP---EGIDIYFENVG---GK----MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD--F  291 (347)
Q Consensus       224 ~~---~~~d~vid~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~  291 (347)
                      ..   .++|+||-+.-   .+    .....+..|+||..+|.+....+.|-..   .........++.++.|...-.  .
T Consensus       238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~---t~pg~~v~~~gV~iig~~nlp~r~  314 (356)
T COG3288         238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCEL---TEPGKVVTKNGVKIIGYTNLPGRL  314 (356)
T ss_pred             HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCccc---ccCCeEEEeCCeEEEeecCcchhh
Confidence            22   26999998763   22    4467788999999999998766554322   112223334567777753211  1


Q ss_pred             ----ccchHHHHHHHHHHHHc
Q 019042          292 ----YHQYPKFLELVMPAIKE  308 (347)
Q Consensus       292 ----~~~~~~~~~~~~~~~~~  308 (347)
                          ...|.+.+-.+++++-+
T Consensus       315 a~~aS~LYa~Nl~~~l~ll~~  335 (356)
T COG3288         315 AAQASQLYATNLVNLLKLLCK  335 (356)
T ss_pred             hhhHHHHHHHHHHHHHHHHhc
Confidence                33445555555555543

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.63  E-value=0.18  Score=44.17  Aligned_cols=95  Identities=17%  Similarity=0.083  Sum_probs=68.0

Q ss_pred             ccCCchhhHHHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          137 ILGMPGLTAYGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      -.||+....+..+.. .++ -.|++++|.|-+.-+|.-.+.++...|+.|++..+...                     +
T Consensus       138 ~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~  195 (285)
T PRK10792        138 LRPCTPRGIMTLLER-YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------N  195 (285)
T ss_pred             CCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------C
Confidence            356665556656644 343 36999999998777999999999999999988864311                     3


Q ss_pred             HHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.+.+++     +|++|.++|.+.+-. -+.++++-.++.+|..
T Consensus       196 l~~~~~~-----ADIvi~avG~p~~v~-~~~vk~gavVIDvGin  233 (285)
T PRK10792        196 LRHHVRN-----ADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             HHHHHhh-----CCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence            3333332     899999999864422 2788999999999863

>PRK14982 acyl-ACP reductase; Provisional

Probab=95.61  E-value=0.076  Score=47.78  Aligned_cols=93  Identities=19%  Similarity=0.188  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKL-VGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~-~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      .+.+|+|+||+|.+|..+++.+.. .|. +++.+.++.++...+.++++...+.      ++.+.+.     .+|+|+.+
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~-----~aDiVv~~  222 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALP-----EADIVVWV  222 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHc-----cCCEEEEC
Confidence            578999999999999888888864 565 8999998888777766455422111      3332332     38999998


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          235 VGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       235 ~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ++. ..+..-...+++.-.++.++.+.
T Consensus       223 ts~~~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        223 ASMPKGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             CcCCcCCcCCHHHhCCCeEEEEecCCC
Confidence            886 33211223557777778887754

>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]

Probab=95.60  E-value=0.43  Score=37.89  Aligned_cols=121  Identities=15%  Similarity=0.071  Sum_probs=88.7

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                      -.|.+|....+|-.+. ..-..+.|-.|+=.|.  |.|-.+=.++++.  -.+++++..+.+-...+.+.+...+++|.+
T Consensus        26 VGaI~PsSs~lA~~M~-s~I~pesglpVlElGP--GTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gd  102 (194)
T COG3963          26 VGAILPSSSILARKMA-SVIDPESGLPVLELGP--GTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGD  102 (194)
T ss_pred             eeeecCCcHHHHHHHH-hccCcccCCeeEEEcC--CccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccc
Confidence            3566777777777666 3357778889999986  3454454555443  237999999998888887677777788877


Q ss_pred             ChhhHHHHHHHHCCCCccEEEECCCc---------hhHHHHHHhhccCCEEEEEcc
Q 019042          212 KEPDLDAALKRCFPEGIDIYFENVGG---------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .. ++...+.+..+..+|.||.+..-         +.++.+...++.+|.++.+..
T Consensus       103 a~-~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY  157 (194)
T COG3963         103 AF-DLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY  157 (194)
T ss_pred             hh-hHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence            76 66666776655589999998862         267888899999999998865

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.57  E-value=0.072  Score=45.32  Aligned_cols=77  Identities=21%  Similarity=0.247  Sum_probs=48.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHH---HhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKN---KFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++|+|++|++|...+..+...|++|+++.++. ++.+...+   ..|..   ...|..+..++.+.+.+...  +++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999988999999998764 32222211   33431   22344443233333333211  358999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      +.+.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998884

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.57  E-value=0.18  Score=43.76  Aligned_cols=97  Identities=18%  Similarity=0.207  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      .++.+||-.|  +|.|..+..+++. |.+|++++.+++..+.+++..   |...-+..... +..+ +.....+.+|+|+
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~  117 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL  117 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence            4567888888  5778888888875 889999999998887776332   32111111111 2222 2222234699998


Q ss_pred             ECCC-----c--hhHHHHHHhhccCCEEEEEc
Q 019042          233 ENVG-----G--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       233 d~~g-----~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ....     .  ..+..+.+.|+++|.++.+-
T Consensus       118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            5432     2  36788899999999998664

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.57  E-value=0.15  Score=47.93  Aligned_cols=44  Identities=20%  Similarity=0.370  Sum_probs=36.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV-NLLKNKFGF  204 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~-~~~~~~~g~  204 (347)
                      +|.|+||.|.+|.+.+..++..|.+|++.++++++. +.+. ++|.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence            589999789999999999999999999999888764 3444 6665

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=95.54  E-value=0.1  Score=44.93  Aligned_cols=81  Identities=23%  Similarity=0.261  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhC-----CC--eeEecCC-hhhHHHHHHHHCC-
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK--VNLLKNKFG-----FD--DAFNYKK-EPDLDAALKRCFP-  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~--~~~~~~~~g-----~~--~vi~~~~-~~~~~~~i~~~~~-  225 (347)
                      .+.+++|+|+++++|.+++..+...|++|+++.+..+.  .+.+.+...     ..  ...|..+ .......+..+.. 
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999888999998888876543  233331222     11  1145443 3233333333222 


Q ss_pred             -CCccEEEECCCc
Q 019042          226 -EGIDIYFENVGG  237 (347)
Q Consensus       226 -~~~d~vid~~g~  237 (347)
                       +++|+++.++|.
T Consensus        84 ~g~id~lvnnAg~   96 (251)
T COG1028          84 FGRIDILVNNAGI   96 (251)
T ss_pred             cCCCCEEEECCCC
Confidence             358999999884

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.09  Score=45.24  Aligned_cols=40  Identities=18%  Similarity=0.331  Sum_probs=33.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLL  198 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~  198 (347)
                      ++++|+|++|++|...++.+...|++|+++++++ ++.+.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~   42 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL   42 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH
Confidence            4799999999999999999988999999999876 444433

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.53  E-value=0.43  Score=35.56  Aligned_cols=91  Identities=20%  Similarity=0.128  Sum_probs=59.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch--
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK--  238 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~--  238 (347)
                      |+|.|. |.+|+..++.++..+.+|++++.++++.+.++ +.|. .++..+.  .-.+.+++..-..++.++-+.+.+  
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~-~~i~gd~--~~~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGV-EVIYGDA--TDPEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTS-EEEES-T--TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hccc-ccccccc--hhhhHHhhcCccccCEEEEccCCHHH
Confidence            678885 99999999999997779999999999999888 7774 3444332  112334443223689888888764  


Q ss_pred             hH--HHHHHhhccCCEEEEE
Q 019042          239 ML--DAVLLNMRIHGRIAVC  256 (347)
Q Consensus       239 ~~--~~~~~~l~~~G~~v~~  256 (347)
                      .+  ....+.+.+..+++..
T Consensus        76 n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   76 NLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHCCCCeEEEE
Confidence            22  2233334455666544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK01581 speE spermidine synthase; Validated

Probab=95.50  E-value=0.33  Score=43.98  Aligned_cols=98  Identities=12%  Similarity=0.064  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhC--------C--CeeEecCChhhHHHHHHHHC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFG--------F--DDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g--------~--~~vi~~~~~~~~~~~i~~~~  224 (347)
                      ....+|||.|  ||.|.++..+++..+ .+|+++.-+++-.+.++ .+.        +  +.-+...-. |..+.+.. +
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~  223 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P  223 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence            3456999999  567778888888655 49999999998888888 421        1  111111111 33343433 3


Q ss_pred             CCCccEEEECCCc------------hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG------------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~------------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+|+||--...            +.+..+.+.|+++|.++.-..
T Consensus       224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            3479998654321            146778889999999886643

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=95.46  E-value=0.084  Score=46.85  Aligned_cols=74  Identities=27%  Similarity=0.388  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhCC-C---eeE--ecCChhhHHHHHHHHCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK---VNLLKNKFGF-D---DAF--NYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~---~~~~~~~~g~-~---~vi--~~~~~~~~~~~i~~~~~~~  227 (347)
                      .+.+|+|+||+|=||...+..+...|++|.+++|+++.   .++++ ++.. .   .++  |-.+...|.+.+.     |
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence            56799999999999999999999999999999998875   33566 5542 2   122  1122224444543     4


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|.||-++.
T Consensus        79 cdgVfH~As   87 (327)
T KOG1502|consen   79 CDGVFHTAS   87 (327)
T ss_pred             CCEEEEeCc
Confidence            899988765

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.44  E-value=0.17  Score=46.18  Aligned_cols=77  Identities=22%  Similarity=0.263  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCC-eeE--ecCChhhHHHHHHHHCCCCccE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF--GFD-DAF--NYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~vi--~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      ..+.+|||+|++|.+|..+++.+...|.+|+++.++.++.+.+...+  +.. ..+  |..+.+.+.+.+    . ++|+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----~-~~d~   82 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAV----K-GCDG   82 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHH----c-CCCE
Confidence            34678999999999999999999989999999988776544333232  111 122  222221222222    2 4899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      ||.+++.
T Consensus        83 Vih~A~~   89 (353)
T PLN02896         83 VFHVAAS   89 (353)
T ss_pred             EEECCcc
Confidence            9988863

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.42  E-value=0.16  Score=44.84  Aligned_cols=94  Identities=18%  Similarity=0.167  Sum_probs=64.9

Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      -+|++....+..|....---.|++|+|+|-++.+|.-.+.++...|+.|++.. ++.+                      
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~----------------------  194 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD----------------------  194 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------
Confidence            35666555555554332224799999999989999999999999999999884 3321                      


Q ss_pred             HHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.+.++     ..|+|+-++|.+ .+...  .+++|..++.+|..
T Consensus       195 l~e~~~-----~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin  232 (296)
T PRK14188        195 LPAVCR-----RADILVAAVGRPEMVKGD--WIKPGATVIDVGIN  232 (296)
T ss_pred             HHHHHh-----cCCEEEEecCChhhcchh--eecCCCEEEEcCCc
Confidence            111121     278999999885 33333  38999999999874

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.40  E-value=0.29  Score=43.56  Aligned_cols=33  Identities=9%  Similarity=0.213  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEe
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSA  189 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~  189 (347)
                      .|++++|+|++  +|+|.+.++.+.+.|++|++..
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~   41 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGT   41 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence            57899999985  8999999999999999999865

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.39  E-value=0.13  Score=46.57  Aligned_cols=87  Identities=21%  Similarity=0.230  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|++|.|+| .|.+|...++.++..|++|++.+++.... ... .++..    +.   ++.+.+.+     .|+|+-+..
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~~---~l~ell~~-----aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----YR---PLEELLRE-----SDFVSLHVP  213 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----ec---CHHHHHhh-----CCEEEEeCC
Confidence            588999999 59999999999999999999998765432 222 44432    11   33333332     688877775


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      . +     .-...+..++++..++.++.
T Consensus       214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             CChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            3 1     11356677787777777654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.38  E-value=0.084  Score=44.83  Aligned_cols=74  Identities=15%  Similarity=0.205  Sum_probs=51.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      |||+||+|-+|..++..+.+.|..|+.+.++.............. ...|..+.+.+.+.+...   .+|.||.+++.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence            799999999999999999999999998888776544443122321 234555542444444433   58999998874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK00536 speE spermidine synthase; Provisional

Probab=95.35  E-value=0.072  Score=46.09  Aligned_cols=97  Identities=13%  Similarity=0.005  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEE-EC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYF-EN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vi-d~  234 (347)
                      ..++|||.|  ||=|-++-+++|+-. +|..+.-+++-.+.+++-+..- ..++.... .+...+.+...+.+|+|| |+
T Consensus        72 ~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIvDs  147 (262)
T PRK00536         72 ELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIICLQ  147 (262)
T ss_pred             CCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEEcC
Confidence            357999999  677888999999865 9999998888777777323320 11211111 111123333334699975 43


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEEc
Q 019042          235 VGG-KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       235 ~g~-~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .-. +.++.+.++|+++|.++.=+
T Consensus       148 ~~~~~fy~~~~~~L~~~Gi~v~Qs  171 (262)
T PRK00536        148 EPDIHKIDGLKRMLKEDGVFISVA  171 (262)
T ss_pred             CCChHHHHHHHHhcCCCcEEEECC
Confidence            444 46678888999999998643

>PRK08317 hypothetical protein; Provisional

Probab=95.33  E-value=0.14  Score=43.57  Aligned_cols=102  Identities=25%  Similarity=0.325  Sum_probs=67.1

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh-CCCeeEecCChhhHHHHHHHHCCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF-GFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ....+.++++||-.|+ | .|..+..+++..+  .++++++.+++..+.+++.. .....+..... +... + ....+.
T Consensus        13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~   87 (241)
T PRK08317         13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS   87 (241)
T ss_pred             HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence            4567888999999995 4 4889999998873  59999999998888887331 11111211111 2111 0 012236


Q ss_pred             ccEEEECC-----Cc--hhHHHHHHhhccCCEEEEEc
Q 019042          228 IDIYFENV-----GG--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       228 ~d~vid~~-----g~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +|+|+...     ..  ..+..+.++|+++|.++...
T Consensus        88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            89887532     22  37788999999999998765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.33  E-value=0.16  Score=41.57  Aligned_cols=76  Identities=17%  Similarity=0.196  Sum_probs=44.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH-------HHHHHHHHHhCCC-ee--EecCChhhHHHHHHHHCC--C
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK-------EKVNLLKNKFGFD-DA--FNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~-------~~~~~~~~~~g~~-~v--i~~~~~~~~~~~i~~~~~--~  226 (347)
                      +++|+|+.|++|+..++.+...|+ +++.+.++.       +..+.++ +.|.. .+  .|..+.+++.+.+.++..  +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            689999999999999998888876 899999882       1234444 44552 11  233333244444444332  2


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      .++-||-+.|
T Consensus        81 ~i~gVih~ag   90 (181)
T PF08659_consen   81 PIDGVIHAAG   90 (181)
T ss_dssp             -EEEEEE---
T ss_pred             Ccceeeeeee
Confidence            5677777766

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=95.28  E-value=0.12  Score=44.08  Aligned_cols=76  Identities=16%  Similarity=0.104  Sum_probs=47.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHC--CCCccEE
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCF--PEGIDIY  231 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  231 (347)
                      ++|+|++|++|...++.+...|++|++++++ +++.+.+.++   .+..   ...|..+.+++.+.+.+..  .+.+|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999888764 3333332212   2321   1234444323333333321  1358899


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +.+.|
T Consensus        81 i~~ag   85 (239)
T TIGR01831        81 VLNAG   85 (239)
T ss_pred             EECCC
Confidence            88876

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN02214 cinnamoyl-CoA reductase

Probab=95.27  E-value=0.13  Score=46.82  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=33.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK  194 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~  194 (347)
                      ++.+|+|+|++|.+|...+..+...|.+|++++++.++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            56789999999999999999999999999999987653

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=95.26  E-value=0.043  Score=49.25  Aligned_cols=71  Identities=20%  Similarity=0.168  Sum_probs=48.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|+|+|++|.+|...++.+...|.+|+++++++++...+. ..+... ..|..+.+++.+.+.     ++|+||.+++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~-----~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDPASLRKAVA-----GCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCHHHHHHHHh-----CCCEEEEece
Confidence            6899999999999999999999999999998766543332 333322 224443312222222     4899998875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.25  E-value=0.24  Score=38.57  Aligned_cols=94  Identities=14%  Similarity=0.057  Sum_probs=63.9

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +|+........+....---+|++|+|+|.+..+|.-++.++...|+.|+.+.+...                     ++.
T Consensus         8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~   66 (140)
T cd05212           8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQ   66 (140)
T ss_pred             cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHH
Confidence            44444444444433322236999999999999999999999999999998874321                     222


Q ss_pred             HHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcc
Q 019042          218 AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+++     +|+|+.++|...+ ---+.+++|-.++.+|.
T Consensus        67 ~~v~~-----ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~  101 (140)
T cd05212          67 SKVHD-----ADVVVVGSPKPEK-VPTEWIKPGATVINCSP  101 (140)
T ss_pred             HHHhh-----CCEEEEecCCCCc-cCHHHcCCCCEEEEcCC
Confidence            23332     7999999987532 12356899988887765

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.24  E-value=0.33  Score=42.14  Aligned_cols=97  Identities=13%  Similarity=0.169  Sum_probs=66.2

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ....+.++++||=+|+  |.|..+..+++.. +.+|++++.++.-.+.+++.+.....+..    |... +  ...+.+|
T Consensus        25 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~-~--~~~~~fD   95 (258)
T PRK01683         25 ARVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIAS-W--QPPQALD   95 (258)
T ss_pred             hhCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhc-c--CCCCCcc
Confidence            3346678899999984  5678888888876 57999999999888888744322222221    2211 1  1122689


Q ss_pred             EEEECCC-----c--hhHHHHHHhhccCCEEEEE
Q 019042          230 IYFENVG-----G--KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       230 ~vid~~g-----~--~~~~~~~~~l~~~G~~v~~  256 (347)
                      +|+....     .  ..+....+.|+++|.++..
T Consensus        96 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         96 LIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             EEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            9986544     1  2678888999999999875

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.21  E-value=0.13  Score=43.25  Aligned_cols=100  Identities=18%  Similarity=0.134  Sum_probs=62.9

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ....++++++||-.|+  |.|..+..+++.. .+|++++.+++..+.+++.+   +... ++.... +..+.+.  ..+.
T Consensus        72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~--~~~~  144 (212)
T PRK00312         72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHN-VSVRHG-DGWKGWP--AYAP  144 (212)
T ss_pred             HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCc-eEEEEC-CcccCCC--cCCC
Confidence            4467889999999984  4566666666654 48999999988776666433   3322 221111 2211111  1136


Q ss_pred             ccEEEECCCc-hhHHHHHHhhccCCEEEEEc
Q 019042          228 IDIYFENVGG-KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       228 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +|+|+..... .......+.|+++|+++..-
T Consensus       145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~  175 (212)
T PRK00312        145 FDRILVTAAAPEIPRALLEQLKEGGILVAPV  175 (212)
T ss_pred             cCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence            9998765443 45667788999999988653

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.20  E-value=0.68  Score=37.95  Aligned_cols=98  Identities=16%  Similarity=0.248  Sum_probs=64.0

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ....+.++++||=.|+  |.|..++.+++.. +.+|++++.+++..+.+++   .++... +..... +....    ..+
T Consensus        25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~-i~~~~~-d~~~~----~~~   96 (187)
T PRK08287         25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGN-IDIIPG-EAPIE----LPG   96 (187)
T ss_pred             HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCC-eEEEec-Cchhh----cCc
Confidence            4456778889998884  5588888888876 4699999999987777653   233322 111111 22111    123


Q ss_pred             CccEEEECCCc----hhHHHHHHhhccCCEEEEE
Q 019042          227 GIDIYFENVGG----KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       227 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  256 (347)
                      .+|+++.....    ..+..+.+.|+++|+++..
T Consensus        97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            69999864321    2667788999999998764

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.19  E-value=2.1  Score=38.01  Aligned_cols=55  Identities=25%  Similarity=0.242  Sum_probs=47.4

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCCee
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGFDDA  207 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~v  207 (347)
                      ...+.||.++||-.-+|..|...+.+++..|++++++..   +.+|+..++ .||+.-+
T Consensus        97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~-a~Gaeii  154 (362)
T KOG1252|consen   97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLR-ALGAEII  154 (362)
T ss_pred             cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHH-HcCCEEE
Confidence            368889999999999999999999999999999999875   456788888 9998543

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.18  E-value=0.24  Score=43.55  Aligned_cols=78  Identities=15%  Similarity=0.121  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -+|.+|+|.|+++-+|...++++...|++|+++.+...                     ++.+.+     ..+|++|.++
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---------------------~L~~~~-----~~aDIvI~At  210 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---------------------NLPELV-----KQADIIVGAV  210 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---------------------hHHHHh-----ccCCEEEEcc
Confidence            47899999997444999999999999998777765211                     111122     1389999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEcccc
Q 019042          236 GGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       236 g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      |.+.+ --.+.++++-.++.++...
T Consensus       211 G~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        211 GKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             CCCCc-CCHHHcCCCCEEEEEEEee
Confidence            86432 2235689998998888643

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.15  E-value=0.06  Score=48.81  Aligned_cols=36  Identities=17%  Similarity=0.230  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      ++.+|||+||+|.+|...++.+...|.+|+++++..
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~   40 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS   40 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence            467899999999999999999999999999988754

>PRK14967 putative methyltransferase; Provisional

Probab=95.13  E-value=0.69  Score=39.16  Aligned_cols=96  Identities=21%  Similarity=0.154  Sum_probs=63.0

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---hCCC-eeEecCChhhHHHHHHHHCCCC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNK---FGFD-DAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ..+.++++||-.|+ |. |..++.+++. ++ +|++++.++...+.+++.   .+.. .+++   . |+.+.+   ..+.
T Consensus        32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~---~-d~~~~~---~~~~  101 (223)
T PRK14967         32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR---G-DWARAV---EFRP  101 (223)
T ss_pred             cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE---C-chhhhc---cCCC
Confidence            46778899999984 44 8888888875 66 999999998877665532   3332 1222   2 433322   1237


Q ss_pred             ccEEEECCCc----------------------------hhHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGG----------------------------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~----------------------------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+|+.+..-                            ..+..+.+.|+++|+++.+..
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~  160 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQS  160 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9999975310                            134567789999999987643

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.12  E-value=0.042  Score=46.77  Aligned_cols=37  Identities=16%  Similarity=0.196  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      ++.+++|+|++|++|...+..+...|++|+++.++..
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~   40 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK   40 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            4678999999999999999999889999999987653

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=95.09  E-value=0.24  Score=45.26  Aligned_cols=118  Identities=18%  Similarity=0.114  Sum_probs=68.5

Q ss_pred             ccccCCchhhHHHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH------------------HH
Q 019042          135 TGILGMPGLTAYGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE------------------KV  195 (347)
Q Consensus       135 aa~l~~~~~tA~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~------------------~~  195 (347)
                      +..+.+.+++- .++.. .+. -+|.+|.|.| .|.+|+.+++.+...|++|++++.+..                  +.
T Consensus       185 aTg~Gv~~~~~-~a~~~-~g~~l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~  261 (411)
T COG0334         185 ATGYGVFYAIR-EALKA-LGDDLEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERR  261 (411)
T ss_pred             ccceehHHHHH-HHHHH-cCCCcCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhh
Confidence            44444444444 34433 343 4899999999 699999999999999999999987765                  44


Q ss_pred             HHHHHHhCCCeeEecCC-----h-----hhHHHHHHHHCC-C-CccEEEECCCchhHHHHHHhhccCCEEEEE
Q 019042          196 NLLKNKFGFDDAFNYKK-----E-----PDLDAALKRCFP-E-GIDIYFENVGGKMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       196 ~~~~~~~g~~~vi~~~~-----~-----~~~~~~i~~~~~-~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~  256 (347)
                      ..+.+.+|+..+ ...+     .     --+..+|..-+- . .+.+|.+.+..++-..+...+...|.++.-
T Consensus       262 ~~v~~~~ga~~i-~~~e~~~~~cDIl~PcA~~n~I~~~na~~l~ak~V~EgAN~P~t~eA~~i~~erGIl~~P  333 (411)
T COG0334         262 GSVAEYAGAEYI-TNEELLEVDCDILIPCALENVITEDNADQLKAKIVVEGANGPTTPEADEILLERGILVVP  333 (411)
T ss_pred             hhHHhhcCceEc-cccccccccCcEEcccccccccchhhHHHhhhcEEEeccCCCCCHHHHHHHHHCCCEEcC
Confidence            455534454322 1100     0     000111111100 1 356777777666556677777777766543

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.09  E-value=0.71  Score=40.90  Aligned_cols=40  Identities=23%  Similarity=0.147  Sum_probs=34.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      .+|.|+|+ |.+|...++.+...|.+|++.+.++++.+.++
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~   43 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAM   43 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            47999995 99999999999999999999999998776543

>PLN02427 UDP-apiose/xylose synthase

Probab=95.07  E-value=0.13  Score=47.66  Aligned_cols=75  Identities=15%  Similarity=0.065  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCC------Cee--EecCChhhHHHHHHHHCCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGF------DDA--FNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~------~~v--i~~~~~~~~~~~i~~~~~~  226 (347)
                      -+..+|||+||+|-+|..+++.+... |.+|++++++.++...+. ..+.      ...  .|..+.    +.+.+... 
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~----~~l~~~~~-   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHD----SRLEGLIK-   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCCh----HHHHHHhh-
Confidence            34568999999999999999888877 589999997766554443 2221      111  233332    12222222 


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|+||.+++
T Consensus        86 ~~d~ViHlAa   95 (386)
T PLN02427         86 MADLTINLAA   95 (386)
T ss_pred             cCCEEEEccc
Confidence            4899999886

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=95.07  E-value=0.27  Score=43.12  Aligned_cols=73  Identities=21%  Similarity=0.213  Sum_probs=46.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC----CCee--------EecCChhhHHHHHHHHCCC-
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFG----FDDA--------FNYKKEPDLDAALKRCFPE-  226 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g----~~~v--------i~~~~~~~~~~~i~~~~~~-  226 (347)
                      |||+||+|.+|...+.-+...+. +++++++++.++-.+++++.    ...+        -|..+    .+.+.+.... 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd----~~~l~~~~~~~   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD----KERLNRIFEEY   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH----HHHHHHHTT--
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC----HHHHHHHHhhc
Confidence            79999999999988888887776 89999999998877776662    1111        12322    2345555554 


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|+||.++.-
T Consensus        77 ~pdiVfHaAA~   87 (293)
T PF02719_consen   77 KPDIVFHAAAL   87 (293)
T ss_dssp             T-SEEEE----
T ss_pred             CCCEEEEChhc
Confidence            79999998873

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.06  E-value=0.12  Score=46.97  Aligned_cols=48  Identities=17%  Similarity=0.123  Sum_probs=38.6

Q ss_pred             hHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          144 TAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       144 tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      |||.-++....+ ++.+|+|+||+|-+|..++..+...|.+|+++++..
T Consensus         2 ~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~   49 (348)
T PRK15181          2 TAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS   49 (348)
T ss_pred             chhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            567666543333 457899999999999999999999999999998754

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=95.06  E-value=0.15  Score=38.10  Aligned_cols=96  Identities=18%  Similarity=0.181  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      |.+|+-.|+  |.|..++.+++....++++++-++...+.++..+   +...-++.... |+.+....+..+.+|+|+-+
T Consensus         1 g~~vlD~~~--G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n   77 (117)
T PF13659_consen    1 GDRVLDPGC--GSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN   77 (117)
T ss_dssp             TEEEEEETS--TTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred             CCEEEEcCc--chHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence            457777764  5666777777665579999999999888777433   22111222222 55444434444589999874


Q ss_pred             CCc---------------hhHHHHHHhhccCCEEEEE
Q 019042          235 VGG---------------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       235 ~g~---------------~~~~~~~~~l~~~G~~v~~  256 (347)
                      ..-               ..+..+.++|+++|.++.+
T Consensus        78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~  114 (117)
T PF13659_consen   78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI  114 (117)
T ss_dssp             -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            421               1367888999999998865

...

>PRK07574 formate dehydrogenase; Provisional

Probab=95.02  E-value=0.16  Score=46.64  Aligned_cols=89  Identities=13%  Similarity=0.101  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|+..++.++..|.+|++..++....+..+ .+|...   +.   ++.+.+.     ..|+|+-+..
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence            578999999 599999999999999999999998753323333 444321   11   3333332     2677777665


Q ss_pred             c-h----hH-HHHHHhhccCCEEEEEcc
Q 019042          237 G-K----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      . +    .+ ...+..|+++..+|.++-
T Consensus       258 lt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            3 1    11 345667777777766653

>PLN00203 glutamyl-tRNA reductase

Probab=95.01  E-value=0.28  Score=46.99  Aligned_cols=75  Identities=25%  Similarity=0.350  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .+.+|+|+|+ |.+|.+++..+...|+ +|+++.++.++.+.+.+.++... +.+...++..+.+.     .+|+||.|+
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al~-----~aDVVIsAT  337 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACAA-----EADVVFTST  337 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHHh-----cCCEEEEcc
Confidence            3679999996 9999999999999997 79999999988777764664221 11111113333332     489999998


Q ss_pred             Cch
Q 019042          236 GGK  238 (347)
Q Consensus       236 g~~  238 (347)
                      +..
T Consensus       338 ~s~  340 (519)
T PLN00203        338 SSE  340 (519)
T ss_pred             CCC
Confidence            763

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.99  E-value=0.25  Score=43.62  Aligned_cols=77  Identities=13%  Similarity=0.138  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK---EKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~---~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      ++.+++|+|+ ||.+.+++..+...|+ +++++.|+.   ++.+.+.+.++..  ..+..... +-...+.+.. ..+|+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~~-~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEAL-ASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhhc-ccCCE
Confidence            5679999996 8889887777777898 899999884   3554444355431  11111111 1011122111 25899


Q ss_pred             EEECCC
Q 019042          231 YFENVG  236 (347)
Q Consensus       231 vid~~g  236 (347)
                      |++|+.
T Consensus       200 vINaTp  205 (288)
T PRK12749        200 LTNGTK  205 (288)
T ss_pred             EEECCC
Confidence            999885

>TIGR00477 tehB tellurite resistance protein TehB

Probab=94.99  E-value=0.11  Score=43.12  Aligned_cols=97  Identities=11%  Similarity=0.060  Sum_probs=60.2

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ....++.+||-.|+  |.|..+..+++ .|.+|++++.++.-.+.+++.   .+..  +..... ++.. . .+ ++.+|
T Consensus        26 ~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~~-~~~fD   96 (195)
T TIGR00477        26 VKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-AL-NEDYD   96 (195)
T ss_pred             hccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-cc-cCCCC
Confidence            34455678999884  67888888886 588999999998766655421   2222  111111 2111 0 11 23699


Q ss_pred             EEEECCC-----c----hhHHHHHHhhccCCEEEEEcc
Q 019042          230 IYFENVG-----G----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       230 ~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+.+.-     .    ..+..+.+.|+++|.++++..
T Consensus        97 ~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~  134 (195)
T TIGR00477        97 FIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA  134 (195)
T ss_pred             EEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            9976421     1    367788889999999766544

Part of a tellurite-reducing operon tehA and tehB

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.99  E-value=0.35  Score=40.76  Aligned_cols=91  Identities=14%  Similarity=0.122  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      ++.+|||.|| |.++.-=+..+...|++|++++..-. .+..+. ..|.-..+. .   ++.+..  +  .++++||-|+
T Consensus        24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~~-r---~~~~~d--l--~g~~LViaAT   93 (223)
T PRK05562         24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLIK-G---NYDKEF--I--KDKHLIVIAT   93 (223)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEEe-C---CCChHH--h--CCCcEEEECC
Confidence            4678999996 99998888888889999999986542 222222 223222221 1   222211  1  2589999999


Q ss_pred             CchhHHHHHHhhc-cCCEEEEEc
Q 019042          236 GGKMLDAVLLNMR-IHGRIAVCG  257 (347)
Q Consensus       236 g~~~~~~~~~~l~-~~G~~v~~g  257 (347)
                      +...++..+...+ ..+.++...
T Consensus        94 dD~~vN~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         94 DDEKLNNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             CCHHHHHHHHHHHHHcCCeEEEc
Confidence            9876666665554 446666554

>PLN03139 formate dehydrogenase; Provisional

Probab=94.98  E-value=0.17  Score=46.60  Aligned_cols=89  Identities=25%  Similarity=0.243  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|+..++.++..|++|++..++....+... +.|+..+    .  ++.+.+.+     .|+|+-+..
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~~-----sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE----E--DLDAMLPK-----CDVVVINTP  264 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec----C--CHHHHHhh-----CCEEEEeCC
Confidence            588999999 599999999999999999999887643333333 4454211    1  33333332     688777665


Q ss_pred             c-h----hH-HHHHHhhccCCEEEEEcc
Q 019042          237 G-K----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      . +    .+ ...+..|+++..+|.++-
T Consensus       265 lt~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence            3 1    11 345667777777776653

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.96  E-value=0.19  Score=45.08  Aligned_cols=87  Identities=22%  Similarity=0.165  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|+++.|.| .|.||++.++.++..|.+|+...+++. .+..+ .+++.++       ++.+.+++     .|++.-+..
T Consensus       145 ~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~P  209 (324)
T COG1052         145 RGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHCP  209 (324)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeCC
Confidence            489999999 599999999999988999999998875 22222 4444432       33344443     788766554


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      . +     .-...+..|++++.+|.++-
T Consensus       210 lt~~T~hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         210 LTPETRHLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             CChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence            3 2     12456778899988887764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=94.96  E-value=0.083  Score=47.37  Aligned_cols=38  Identities=21%  Similarity=0.280  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK  194 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~  194 (347)
                      .+.+|||+||+|.+|...+..+...|.+|++++++.++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            36789999999999999999999999999998876543

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.96  E-value=0.12  Score=39.55  Aligned_cols=80  Identities=19%  Similarity=0.194  Sum_probs=50.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      -+|-|+|+ |-+|......++..|..|..+.+ +.+..+.+...++...+.+..+      .+     ...|++|=++.+
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------~~-----~~aDlv~iavpD   78 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE------IL-----RDADLVFIAVPD   78 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG------GG-----CC-SEEEE-S-C
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc------cc-----ccCCEEEEEech
Confidence            47999996 99999999999999999988864 4445566653445443333221      11     248999999998


Q ss_pred             hhHHHHHHhhccC
Q 019042          238 KMLDAVLLNMRIH  250 (347)
Q Consensus       238 ~~~~~~~~~l~~~  250 (347)
                      +.+...+..|...
T Consensus        79 daI~~va~~La~~   91 (127)
T PF10727_consen   79 DAIAEVAEQLAQY   91 (127)
T ss_dssp             CHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHh
Confidence            8887777777654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.93  E-value=0.39  Score=38.25  Aligned_cols=89  Identities=20%  Similarity=0.207  Sum_probs=61.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC------Cee----EecCChhhHHHHHHHHCCCCcc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF------DDA----FNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~------~~v----i~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      +|.|.|+ |..|.+.+..+...|.+|+.-.++++..+.++ +-+.      ...    +....  |+.+.++     +.|
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~-~~~~n~~~~~~~~l~~~i~~t~--dl~~a~~-----~ad   71 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEIN-ETRQNPKYLPGIKLPENIKATT--DLEEALE-----DAD   71 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHH-HHTSETTTSTTSBEETTEEEES--SHHHHHT-----T-S
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhCCCCCCCCCcccCccccccc--CHHHHhC-----ccc
Confidence            5889996 99999999999999999999999998888777 3222      111    11112  5555553     489


Q ss_pred             EEEECCCchhHHHHHHhhcc---CCEEEEEc
Q 019042          230 IYFENVGGKMLDAVLLNMRI---HGRIAVCG  257 (347)
Q Consensus       230 ~vid~~g~~~~~~~~~~l~~---~G~~v~~g  257 (347)
                      +++-++....++..++.+++   .+..+..-
T Consensus        72 ~IiiavPs~~~~~~~~~l~~~l~~~~~ii~~  102 (157)
T PF01210_consen   72 IIIIAVPSQAHREVLEQLAPYLKKGQIIISA  102 (157)
T ss_dssp             EEEE-S-GGGHHHHHHHHTTTSHTT-EEEET
T ss_pred             EEEecccHHHHHHHHHHHhhccCCCCEEEEe
Confidence            99999988777777777666   45555543

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.93  E-value=1.2  Score=39.44  Aligned_cols=40  Identities=25%  Similarity=0.208  Sum_probs=34.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      .+|.|+|+ |.+|...++.+...|.+|+..+.++++.+.++
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~   43 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAK   43 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            47999995 99999999998888999999999988766654

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.93  E-value=0.11  Score=46.44  Aligned_cols=87  Identities=14%  Similarity=0.105  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|+..++.++..|++|++..++.++.+      +.....  ... ++.+.+.     ..|+|+.+..
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~-----~aDvvv~~lP  199 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLS-----QTRVLINLLP  199 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHh-----cCCEEEECCC
Confidence            578999999 599999999999999999999887543211      111111  111 3444443     2788888776


Q ss_pred             c-h----h-HHHHHHhhccCCEEEEEcc
Q 019042          237 G-K----M-LDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~----~-~~~~~~~l~~~G~~v~~g~  258 (347)
                      . +    . -...++.|+++..+|.++-
T Consensus       200 lt~~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        200 NTPETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence            4 2    1 2346678888888887764

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=94.92  E-value=0.88  Score=40.07  Aligned_cols=56  Identities=25%  Similarity=0.273  Sum_probs=45.3

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCCeeEec
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGFDDAFNY  210 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~vi~~  210 (347)
                      ..+++|+ .+|=+.+|..|...+.+|+.+|++++++..   +.+|.+.++ .+|+.-++..
T Consensus        57 G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~-a~GAevi~t~  115 (300)
T COG0031          57 GLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLR-ALGAEVILTP  115 (300)
T ss_pred             CCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HcCCEEEEcC
Confidence            5688998 566677899999999999999999888764   678888888 9998644433

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.89  E-value=0.31  Score=41.03  Aligned_cols=98  Identities=15%  Similarity=0.120  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee--------------EecCChhhHHHHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA--------------FNYKKEPDLDAALK  221 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--------------i~~~~~~~~~~~i~  221 (347)
                      .++.+||+.|.  |.|.-++.+|. .|.+|++++.++.-.+.+.++.+....              ++.... |+.+.-.
T Consensus        33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~~~  108 (213)
T TIGR03840        33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG-DFFALTA  108 (213)
T ss_pred             CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc-cCCCCCc
Confidence            46779999984  67888888875 699999999999877765323332100              110000 1111000


Q ss_pred             HHCCCCccEEEECCC---------chhHHHHHHhhccCCEEEEEcc
Q 019042          222 RCFPEGIDIYFENVG---------GKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       222 ~~~~~~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      . ..+.+|.++|+..         ...+....++|+++|+++....
T Consensus       109 ~-~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       109 A-DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             c-cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            0 0125899999754         1267888999999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=94.88  E-value=0.33  Score=46.85  Aligned_cols=93  Identities=22%  Similarity=0.184  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++.+++|+|+ |++|.+++..+...|++|+++.++.++.+.+.+.++.. .+.+.   ++.+    ......|++++|+.
T Consensus       378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~---~~~~----~~~~~~diiINtT~  448 (529)
T PLN02520        378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLA---DLEN----FHPEEGMILANTTS  448 (529)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHh---Hhhh----hccccCeEEEeccc
Confidence            4678999997 89999999999999999999999888777666456532 23222   2211    11124789998775


Q ss_pred             chh---H---HHHHHhhccCCEEEEEcc
Q 019042          237 GKM---L---DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~~~---~---~~~~~~l~~~G~~v~~g~  258 (347)
                      -..   .   ......+++.+.++.+-.
T Consensus       449 vGm~~~~~~~pl~~~~l~~~~~v~D~vY  476 (529)
T PLN02520        449 VGMQPNVDETPISKHALKHYSLVFDAVY  476 (529)
T ss_pred             CCCCCCCCCCcccHhhCCCCCEEEEecc
Confidence            321   0   112345667777766654

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.87  E-value=0.16  Score=40.46  Aligned_cols=98  Identities=18%  Similarity=0.112  Sum_probs=57.7

Q ss_pred             cccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          136 GILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       136 a~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      .-+|++....+..|....---+|++|+|.|.+..+|.-+..++...|+.|+...+...                     +
T Consensus        14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~---------------------~   72 (160)
T PF02882_consen   14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK---------------------N   72 (160)
T ss_dssp             SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS---------------------S
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC---------------------c
Confidence            3445444445555544322347999999999889999999999999999988764421                     2


Q ss_pred             HHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.+.++     ..|+|+-++|.+.+-. -+.++++-.++.+|...
T Consensus        73 l~~~~~-----~ADIVVsa~G~~~~i~-~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   73 LQEITR-----RADIVVSAVGKPNLIK-ADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             HHHHHT-----TSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred             ccceee-----eccEEeeeeccccccc-cccccCCcEEEecCCcc
Confidence            222232     2799999998754322 24678888888888754

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=94.87  E-value=0.32  Score=40.55  Aligned_cols=33  Identities=18%  Similarity=0.240  Sum_probs=28.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGS  191 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~  191 (347)
                      +.+|+|.|+ |++|..+++.+...|. +++.++.+
T Consensus        21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            468999995 9999999999999998 78888765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=94.86  E-value=0.14  Score=47.37  Aligned_cols=76  Identities=18%  Similarity=0.262  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC----------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHH
Q 019042          157 KGEYVYVSAA----------------SGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL  220 (347)
Q Consensus       157 ~~~~vlI~ga----------------~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i  220 (347)
                      +|.+|+|+||                +|.+|.+.++.+...|++|+.+.++.+ .+  . ..+. ..++..+..++.+.+
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~-~~~~-~~~dv~~~~~~~~~v  261 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--T-PAGV-KRIDVESAQEMLDAV  261 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--C-CCCc-EEEccCCHHHHHHHH
Confidence            6889999999                566999999999999999999986642 11  1 1122 345655544666666


Q ss_pred             HHHCCCCccEEEECCCch
Q 019042          221 KRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       221 ~~~~~~~~d~vid~~g~~  238 (347)
                      .+.. +.+|++|.+++-.
T Consensus       262 ~~~~-~~~DilI~~Aav~  278 (399)
T PRK05579        262 LAAL-PQADIFIMAAAVA  278 (399)
T ss_pred             HHhc-CCCCEEEEccccc
Confidence            5543 3599999998853

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.85  E-value=0.26  Score=43.46  Aligned_cols=94  Identities=18%  Similarity=0.157  Sum_probs=65.6

Q ss_pred             ccCCchhhHHHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          137 ILGMPGLTAYGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      -+|++....+..|... ++ -.|++|.|+|.++-+|.-.+.++...|+.|++..+...                     +
T Consensus       138 ~~PcTp~aii~lL~~~-~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~  195 (301)
T PRK14194        138 LTPCTPSGCLRLLEDT-CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------D  195 (301)
T ss_pred             CCCCcHHHHHHHHHHh-CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------C
Confidence            3566655555555443 44 46999999998779999999999999999998864422                     1


Q ss_pred             HHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      ..+..+     ..|+|+-++|.+ .+...  .++++..++.+|..
T Consensus       196 l~e~~~-----~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin  233 (301)
T PRK14194        196 AKALCR-----QADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN  233 (301)
T ss_pred             HHHHHh-----cCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence            112222     278999999874 33333  38999999998864

>PLN00198 anthocyanidin reductase; Provisional

Probab=94.84  E-value=0.14  Score=46.31  Aligned_cols=36  Identities=17%  Similarity=0.141  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      +.+|||+||+|.+|...+..+...|++|++++++..
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~   44 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE   44 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            678999999999999999999999999988887654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=94.80  E-value=0.13  Score=46.70  Aligned_cols=34  Identities=18%  Similarity=0.269  Sum_probs=31.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      ++|||+||+|.+|...++.+...|.+|++++++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~   34 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRS   34 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence            3799999999999999999999999999998764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.78  E-value=0.38  Score=40.88  Aligned_cols=90  Identities=16%  Similarity=0.225  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEeCC----HHH--------HHHHHHHhCCCeeEecCChhhHHHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC---YVVGSAGS----KEK--------VNLLKNKFGFDDAFNYKKEPDLDAAL  220 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~---~V~~~~~~----~~~--------~~~~~~~~g~~~vi~~~~~~~~~~~i  220 (347)
                      -++.+++|.|+ |+.|..++..+...|+   +++++.++    .++        .++++ .++... .+   . ++.+.+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL   95 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence            45789999996 9999999999988897   48888887    333        23333 433211 11   1 333444


Q ss_pred             HHHCCCCccEEEECCCchhH-HHHHHhhccCCEEEEEc
Q 019042          221 KRCFPEGIDIYFENVGGKML-DAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       221 ~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  257 (347)
                      .     ++|++|.+++...+ ...++.++++..+..+.
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            2     38999999974332 35566677776665544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.78  E-value=0.048  Score=38.80  Aligned_cols=82  Identities=21%  Similarity=0.249  Sum_probs=53.3

Q ss_pred             ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEEECCCc-------h
Q 019042          168 GAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYFENVGG-------K  238 (347)
Q Consensus       168 g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-------~  238 (347)
                      .|.|..+..+++..+.+|++++.+++..+.+++......  ....+.. ++     ....+.+|+|+....-       .
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~   78 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA   78 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence            457888889988867799999999998888884443321  2222111 11     1112368999875432       2


Q ss_pred             hHHHHHHhhccCCEEEE
Q 019042          239 MLDAVLLNMRIHGRIAV  255 (347)
Q Consensus       239 ~~~~~~~~l~~~G~~v~  255 (347)
                      .+.++.+.|+++|+++.
T Consensus        79 ~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   79 ALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             HHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHcCcCeEEeC
Confidence            67889999999999874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=94.76  E-value=0.053  Score=46.59  Aligned_cols=67  Identities=15%  Similarity=0.137  Sum_probs=46.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      |+|+|++|-+|...++.++..|-+|++++|++.+.+..   ++.. +.+       .+.+.+....++|+||+-+|.+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~~-v~~-------~~~~~~~~~~~~DavINLAG~~   67 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN---LHPN-VTL-------WEGLADALTLGIDAVINLAGEP   67 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCcc-ccc-------cchhhhcccCCCCEEEECCCCc
Confidence            68999999999999999999999999999998764322   2221 111       1122222222599999998843

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.76  E-value=0.44  Score=41.72  Aligned_cols=94  Identities=22%  Similarity=0.146  Sum_probs=66.8

Q ss_pred             cCCchhhHHHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          138 LGMPGLTAYGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      +||+....+..|.. .++ -.|.+|+|.|.+.-+|.-++.++...++.|+...+...                     ++
T Consensus       138 ~PcTp~av~~lL~~-~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~l  195 (284)
T PRK14190        138 LPCTPHGILELLKE-YNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------NL  195 (284)
T ss_pred             CCCCHHHHHHHHHH-cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------hH
Confidence            46555555555543 343 47999999999999999999999999999987643211                     23


Q ss_pred             HHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          217 DAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       217 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      .+.+++     .|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus       196 ~~~~~~-----ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~  232 (284)
T PRK14190        196 AELTKQ-----ADILIVAVGKPKL-ITADMVKEGAVVIDVGVN  232 (284)
T ss_pred             HHHHHh-----CCEEEEecCCCCc-CCHHHcCCCCEEEEeecc
Confidence            333333     8999999988644 224567999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	347
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		1e-147
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		1e-141
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		1e-63
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		3e-56
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		8e-55
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		9e-55
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		1e-41
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		1e-41
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		2e-38
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		4e-35
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		7e-23
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		7e-23
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		8e-23
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		4e-10
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		6e-10
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		9e-08
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		9e-08
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		1e-07
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		5e-07
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		9e-07
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		2e-05
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		1e-04
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-04
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		7e-04
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		8e-04

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  519 bits (1336), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 249/343 (72%), Positives = 298/343 (86%), Gaps = 2/343 (0%)
Query: 5   EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMS 64
           E VSNKQVIL NYVTG+PKESDM+I   +I LKVPEGS D V++KNLYLSCDPYMR RM 
Sbjct: 3   EEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSND-VVVKNLYLSCDPYMRSRMR 61
Query: 65  KLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKI 124
           K++  S+V SF PG P++GYGV+KVL+S  P ++K DLVWG+T WEEYS+I   Q L KI
Sbjct: 62  KIEG-SYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120
Query: 125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
            D +VPLSYYTGILGMPG+TAY G +E+CSPKKGE V+VSAASGAVGQLVGQFAK++GCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180
Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           VVGSAGSKEKV+LLK+KFGFD+AFNYK+E DL AALKR FP+GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240
Query: 245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
           +NM+++GRIAVCGMISQYNLE+ EGVHNL  ++ KRIRMEGFL  D+YH YPK+LE+V+P
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300
Query: 305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            IK GK+VYVED+A GLE AP+ALVG+F+G+N+GKQ+V+V+ E
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  499 bits (1284), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 239/346 (69%), Positives = 287/346 (82%), Gaps = 6/346 (1%)
Query: 6   AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSK 65
             +NKQVIL +YV+GFP ESD    T ++ L+VPEG+ ++VL+KNLYLSCDPYMR RM K
Sbjct: 2   TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMRIRMGK 60
Query: 66  LDKPSFVA---SFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHL- 121
            D PS  A   ++ PG+P+ GYGVS++++S HP+YKK DL+WG+ +WEEYS+I    H  
Sbjct: 61  PD-PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAH 119
Query: 122 IKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV 181
            KI  T+VPLSYYTG+LGMPG+TAY G YE+CSPK+GE VYVSAASGAVGQLVGQ AK++
Sbjct: 120 FKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMM 179
Query: 182 GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD 241
           GCYVVGSAGSKEKV+LLK KFGFDDAFNYK+E DL AALKRCFP GIDIYFENVGGKMLD
Sbjct: 180 GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLD 239
Query: 242 AVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLEL 301
           AVL+NM +HGRIAVCGMISQYNLE  EGVHNL  ++ KR R++GF+  DFY +Y KFLE 
Sbjct: 240 AVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEF 299
Query: 302 VMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           V+P I+EGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVVA E
Sbjct: 300 VLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/337 (40%), Positives = 192/337 (56%), Gaps = 9/337 (2%)
Query: 9   NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK 68
           N+Q  L+   +G P       +   +     E ++  +L+KN YLS DP MRG M+  D 
Sbjct: 8   NRQYQLAQRPSGLPGRDTFSFVETPLG----EPAEGQILVKNEYLSLDPAMRGWMN--DA 61
Query: 69  PSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTN 128
            S++     GE +   GV KVL S HP ++  D V G    ++Y  I  P+   K+  + 
Sbjct: 62  RSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDY-FIGEPKGFYKVDPSR 120
Query: 129 VPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS 188
            PL  Y   LGM G+TAY  L ++  PK GE V +S A+GAVG + GQ A+L GC VVG 
Sbjct: 121 APLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGI 180
Query: 189 AGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMR 248
           AG  EK   L  + GFD A +YK E DL A LKR  P+GID++F+NVGG++LD VL  + 
Sbjct: 181 AGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIA 239
Query: 249 IHGRIAVCGMISQY-NLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIK 307
              RI +CG ISQY N E   G  N + ++  R RMEG +  D+  ++P+ L+ +   + 
Sbjct: 240 FKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLA 299
Query: 308 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           EGKL   EDI EGLE  P  L+ +F+G+N GK ++ V
Sbjct: 300 EGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score =  215 bits (547), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 197/349 (56%), Gaps = 28/349 (8%)
Query: 4   EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRM 63
           E  V  K   L  +  G P +SD ++ T    +++P      VLL+ L+LS DPYMR   
Sbjct: 3   EFMVKAKSWTLKKHFQGKPTQSDFELKT----VELPPLKNGEVLLEALFLSVDPYMRIAS 58
Query: 64  SKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIK 123
            +L +         G  + G  V++V++S +  +    +V   + W  +  I   + L K
Sbjct: 59  KRLKE---------GAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTH-FISDGKGLEK 108
Query: 124 ILDT---NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKL 180
           +L      +PLS   G +GMPGLTAY GL E+C  K GE V VSAA+GAVG +VGQ AKL
Sbjct: 109 LLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKL 168
Query: 181 VGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKML 240
            GC VVG+AGS EK+  LK + GFD AFNYK    L+ ALK+  P+G D YF+NVGG+ L
Sbjct: 169 KGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFL 227
Query: 241 DAVLLNMRIHGRIAVCGMISQYNL--EKPEGVHNLMQVVGKRIRMEGFLA----GDFYHQ 294
           + VL  M+  G+IA+CG IS YN   + P G  +   ++ K++R+EGF+     GD    
Sbjct: 228 NTVLSQMKDFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVRE- 285
Query: 295 YPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV 343
             K L  +M  + EGK+ Y E + +G E  P+A + +  G N+GK +V 
Sbjct: 286 --KALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score =  210 bits (535), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/342 (39%), Positives = 188/342 (54%), Gaps = 26/342 (7%)
Query: 9   NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK 68
            K   L  +  G+P  SD ++ T  +    P      VLL+ L+L+ DPYMR    +L +
Sbjct: 24  TKTWTLKKHFVGYPTNSDFELKTSEL----PPLKNGEVLLEALFLTVDPYMRVAAKRLKE 79
Query: 69  PSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDT- 127
                    G+ + G  V+KV++S +    K  +V     W  +S I   + L K+L   
Sbjct: 80  ---------GDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHS-ISDGKDLEKLLTEW 129
Query: 128 --NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
              +PLS   G +GMPGLTAY GL E+C  K GE V V+AA+GAVG +VGQ AKL GC V
Sbjct: 130 PDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 189
Query: 186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL 245
           VG+ GS EKV  L+ K GFD  FNYK    L+  LK+  P+G D YF+NVGG+  + V+ 
Sbjct: 190 VGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIG 248
Query: 246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQ-VVGKRIRMEGFLA----GDFYHQYPKFLE 300
            M+  GRIA+CG IS YN   P       + V+ + +RME F+     GD      K L+
Sbjct: 249 QMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALK 305
Query: 301 LVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
            ++  + EGK+ Y E I EG E  P+A +G+  G N+GK +V
Sbjct: 306 DLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 347

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score =  210 bits (535), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/342 (39%), Positives = 188/342 (54%), Gaps = 26/342 (7%)
Query: 9   NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK 68
            K   L  +  G+P  SD ++ T  +    P      VLL+ L+L+ DPYMR    +L +
Sbjct: 3   TKTWTLKKHFVGYPTNSDFELKTSEL----PPLKNGEVLLEALFLTVDPYMRVAAKRLKE 58
Query: 69  PSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDT- 127
                    G+ + G  V+KV++S +    K  +V     W  +S I   + L K+L   
Sbjct: 59  ---------GDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHS-ISDGKDLEKLLTEW 108
Query: 128 --NVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
              +PLS   G +GMPGLTAY GL E+C  K GE V V+AA+GAVG +VGQ AKL GC V
Sbjct: 109 PDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 168
Query: 186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLL 245
           VG+ GS EKV  L+ K GFD  FNYK    L+  LK+  P+G D YF+NVGG+  + V+ 
Sbjct: 169 VGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIG 227
Query: 246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQ-VVGKRIRMEGFLA----GDFYHQYPKFLE 300
            M+  GRIA+CG IS YN   P       + V+ + +RME F+     GD      K L+
Sbjct: 228 QMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALK 284
Query: 301 LVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
            ++  + EGK+ Y E I EG E  P+A +G+  G N+GK +V
Sbjct: 285 DLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 326

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 166/312 (53%), Gaps = 12/312 (3%)
Query: 46  VLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG 105
           V ++ LYLS DPYMR RM++     ++  +   + + G G+  + +S H N  K D V  
Sbjct: 45  VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTS 104
Query: 106 LTSWEEYSLIQSPQHLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELCSPKKG--EYV 161
                +  +I     L K+    V   LSY+ G +GMPGLT+  G+ E      G  + +
Sbjct: 105 FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTM 164
Query: 162 YVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL 220
            VS A+GA G + GQ    +GC  VVG  G+ EK  LL ++ GFD A NYKK+ ++   L
Sbjct: 165 VVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQL 223
Query: 221 KRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYN--LEKPEGVHNLMQVVG 278
           +   P G+D+YF+NVGG + D V+  M  +  I +CG ISQYN  +  P  +   ++ + 
Sbjct: 224 RESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQ 283
Query: 279 KR--IRMEGFLAGDFYHQY-PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQ 335
           K   I  E FL  ++  ++ P  L+L     KEGKL   E +  GLE   +A   + TG 
Sbjct: 284 KERNITRERFLVLNYKDKFEPGILQLSQ-WFKEGKLKIKETVINGLENMGAAFQSMMTGG 342
Query: 336 NVGKQLVVVAPE 347
           N+GKQ+V ++ E
Sbjct: 343 NIGKQIVCISEE 354

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 166/312 (53%), Gaps = 12/312 (3%)
Query: 46  VLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG 105
           V ++ LYLS DPYMR RM++     ++  +   + + G G+  + +S H N  K D V  
Sbjct: 40  VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTS 99
Query: 106 LTSWEEYSLIQSPQHLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELCSPKKG--EYV 161
                +  +I     L K+    V   LSY+ G +GMPGLT+  G+ E      G  + +
Sbjct: 100 FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTM 159
Query: 162 YVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL 220
            VS A+GA G + GQ    +GC  VVG  G+ EK  LL ++ GFD A NYKK+ ++   L
Sbjct: 160 VVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQL 218
Query: 221 KRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYN--LEKPEGVHNLMQVVG 278
           +   P G+D+YF+NVGG + D V+  M  +  I +CG ISQYN  +  P  +   ++ + 
Sbjct: 219 RESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQ 278
Query: 279 KR--IRMEGFLAGDFYHQY-PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQ 335
           K   I  E FL  ++  ++ P  L+L     KEGKL   E +  GLE   +A   + TG 
Sbjct: 279 KERNITRERFLVLNYKDKFEPGILQLSQ-WFKEGKLKIKETVINGLENMGAAFQSMMTGG 337
Query: 336 NVGKQLVVVAPE 347
           N+GKQ+V ++ E
Sbjct: 338 NIGKQIVCISEE 349

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 166/318 (52%), Gaps = 24/318 (7%)
Query: 46  VLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG 105
           V ++ LYLS DPYMR +M++     ++A +   +   G G+  V +S H    K D V  
Sbjct: 41  VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTS 100
Query: 106 L-TSWEEYSLIQ-------SPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYE--LCSP 155
               W+  +++         PQ    ++D +  LSY+ G +GMPGLT+  G+ E    S 
Sbjct: 101 FYWPWQTKAILDGNGLEKVDPQ----LVDGH--LSYFLGAIGMPGLTSLIGVQEKGHISA 154
Query: 156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEP 214
              + + VS A+GA G L GQ   L+GC  VVG  G++EK   L ++ GFD A NYK   
Sbjct: 155 GSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-G 213
Query: 215 DLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLM 274
           ++   L+   P G+D+YF+NVGG + +AV+  M  +  I +CG ISQY+ + P       
Sbjct: 214 NVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPP 273
Query: 275 QVVGKR----IRMEGFLAGDFYHQY-PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALV 329
            V   R    I  E F   ++  ++ P  L+L     KEGKL   E +A+GLE    A  
Sbjct: 274 AVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ-WFKEGKLKVKETMAKGLENMGVAFQ 332
Query: 330 GIFTGQNVGKQLVVVAPE 347
            + TG NVGKQ+V ++ +
Sbjct: 333 SMMTGGNVGKQIVCISED 350

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score =  145 bits (365), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 159/318 (50%), Gaps = 24/318 (7%)
Query: 46  VLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG 105
           V ++ LYLS DPY R + ++     ++A +   +   G G+  V +S H    K D V  
Sbjct: 51  VQVRTLYLSVDPYXRCKXNEDTGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTS 110
Query: 106 L-TSWEEYSLIQ-------SPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYE--LCSP 155
               W+  +++         PQ    ++D +  LSY+ G +G PGLT+  G+ E    S 
Sbjct: 111 FYWPWQTKAILDGNGLEKVDPQ----LVDGH--LSYFLGAIGXPGLTSLIGVQEKGHISA 164
Query: 156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEP 214
              +   VS A+GA G L GQ   L+GC  VVG  G++EK   L ++ GFD A NYK   
Sbjct: 165 GSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-G 223
Query: 215 DLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLM 274
           ++   L+   P G+D+YF+NVGG + + V+     +  I +CG ISQYN + P       
Sbjct: 224 NVAEQLREACPGGVDVYFDNVGGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPP 283
Query: 275 QVVGKR----IRMEGFLAGDFYHQY-PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALV 329
            V   R    I  E F   ++  ++ P  L+L     KEGKL   E +A+GLE    A  
Sbjct: 284 AVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ-WFKEGKLKVKETVAKGLENXGVAFQ 342
Query: 330 GIFTGQNVGKQLVVVAPE 347
              TG NVGKQ+V ++ +
Sbjct: 343 SXXTGGNVGKQIVCISED 360

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 40/336 (11%)
Query: 30  ITGSINLKVPEGSKDTVLLKNLYLSCDP----YMRGRMSKLDKPSFVASFNPGEPLSGYG 85
           +T S +  VP      +L++N ++  +     Y  GR     KP F   F         G
Sbjct: 19  VTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFE--------G 70
Query: 86  VSKVLD---STHPNYKKDDLVWGLT--SWEEYSLIQSPQHLIKILDTNVPLSYYTGILGM 140
           + +V+    S    Y     V  +   S+ EY+++  P  +   + +  P  Y T  L +
Sbjct: 71  IGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIATPVPSVKP-EYLT--LLV 125
Query: 141 PGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN 200
            G TAY  L EL    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S EK   LK+
Sbjct: 126 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 185
Query: 201 KFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
             G D   NYK EP +   LK+ +PEG+D+ +E+VGG M D  +  +   GR+ V G IS
Sbjct: 186 -LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS 243
Query: 261 QYNLEKPEGVHNL------MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV 314
            Y  + P G+  +       +++ K   ++GF    +  +Y   +  ++     G LV  
Sbjct: 244 GY--QTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCE 301
Query: 315 EDIAE--------GLEKAPSALVGIFTGQNVGKQLV 342
            D+ +        GLE    A+  ++ G+N GK +V
Sbjct: 302 VDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 337

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 40/336 (11%)
Query: 30  ITGSINLKVPEGSKDTVLLKNLYLSCDP----YMRGRMSKLDKPSFVASFNPGEPLSGYG 85
           +T S +  VP      +L++N ++  +     Y  GR     KP F   F         G
Sbjct: 48  VTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFE--------G 99
Query: 86  VSKVLD---STHPNYKKDDLVWGLT--SWEEYSLIQSPQHLIKILDTNVPLSYYTGILGM 140
           + +V+    S    Y     V  +   S+ EY+++  P  +   + +  P  Y T  L +
Sbjct: 100 IGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIATPVPSVKP-EYLT--LLV 154
Query: 141 PGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN 200
            G TAY  L EL    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S EK   LK+
Sbjct: 155 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 214
Query: 201 KFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
             G D   NYK EP +   LK+ +PEG+D+ +E+VGG M D  +  +   GR+ V G IS
Sbjct: 215 -LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS 272
Query: 261 QYNLEKPEGVHNL------MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV 314
            Y  + P G+  +       +++ K   ++GF    +  +Y   +  ++     G LV  
Sbjct: 273 GY--QTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCE 330
Query: 315 EDIAE--------GLEKAPSALVGIFTGQNVGKQLV 342
            D+ +        GLE    A+  ++ G+N GK +V
Sbjct: 331 VDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 366

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score =  104 bits (259), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 40/336 (11%)
Query: 30  ITGSINLKVPEGSKDTVLLKNLYLSCDP----YMRGRMSKLDKPSFVASFNPGEPLSGYG 85
           +T S +  VP      +L++N ++  +     Y  GR     KP F   F         G
Sbjct: 40  VTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFE--------G 91
Query: 86  VSKVLD---STHPNYKKDDLVWGLT--SWEEYSLIQSPQHLIKILDTNVPLSYYTGILGM 140
           + +V+    S    Y     V  +   S+ EY+++  P  +   + +  P  Y T  L +
Sbjct: 92  IGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIATPVPSVKP-EYLT--LLV 146
Query: 141 PGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN 200
            G TAY  L EL    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S EK   LK+
Sbjct: 147 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206
Query: 201 KFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
             G D   NYK EP +   LK+ +PEG+D+ +E+VGG M D  +  +   GR+ V G IS
Sbjct: 207 -LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS 264
Query: 261 QYNLEKPEGVHNL------MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV 314
            Y  + P G+  +       +++ K   ++GF    +  +Y   +  ++     G LV  
Sbjct: 265 GY--QTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCE 322
Query: 315 EDIAE--------GLEKAPSALVGIFTGQNVGKQLV 342
            D+ +        GLE    A+  ++ G+N GK +V
Sbjct: 323 VDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 20/232 (8%)
Query: 38  VPEGSKDTVLLKNLYLSC---DPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTH 94
           VP  S++ +L+KN Y      + Y R  +   +KP  +     G   SG  V+K    T 
Sbjct: 30  VPSISEEELLIKNKYTGVNYIESYFRKGIYPCEKPYVL-----GREASGTVVAKGKGVT- 83
Query: 95  PNYKKDDLVWGLT--SWEEYSLIQSPQHLIKI----LDTNVPLSYYTGILGMPGLTAYGG 148
            N++  D V  ++  ++ +YS I S   ++K+     D  + L Y  G+L +  LTA   
Sbjct: 84  -NFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL-YAAGLLQV--LTALSF 139
Query: 149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAF 208
             E    KKG+YV + AA+G VG ++ Q  K+ G + +  A + EK+ + K ++G +   
Sbjct: 140 TNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLI 198
Query: 209 NYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
           N  KE  L   LK    +G+D  F++VG    +  L  ++  G     G  S
Sbjct: 199 NASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 20/232 (8%)
Query: 35  NLKVPEGSKDTVLLKNLYLSCDP---YMR-GRMSKLDKPSFVASFNPGEPLSGYGVSKVL 90
           ++ VP      VL+K      +P   Y+R G  S+  KP  +  + PG  ++G  V + +
Sbjct: 49  DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KP--LLPYTPGSDVAG--VIEAV 102
Query: 91  DSTHPNYKKDDLVWGLTS----WEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAY 146
                 +KK D V+  ++    + EY+L  +  H +  L   +       I G+P  TAY
Sbjct: 103 GDNASAFKKGDRVFTSSTISGGYAEYAL--AADHTVYKLPEKLDFKQGAAI-GIPYFTAY 159
Query: 147 GGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL-LKNKFGFD 205
             L      K GE V V  ASG VG    Q A+  G  ++G+AG++E   + L+N  G  
Sbjct: 160 RALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN--GAH 217
Query: 206 DAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
           + FN+++   +D   K    +GIDI  E +    L   L  +   GR+ V G
Sbjct: 218 EVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
           LTA+  L+ + + + G+YV + A    VG    Q  ++ G   + +AGS++K+ + + K 
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 190
Query: 203 GFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQY 262
           G    FNYKKE   +A LK     G+++  + +GG   +  +  + + GR  + G++   
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 263 NLEKP 267
           ++  P
Sbjct: 251 DINGP 255

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
           LTA+  L+ + + + G+YV + A    VG    Q  ++ G   + +AGS++K+ + + K 
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206
Query: 203 GFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQY 262
           G    FNYKKE   +A LK     G+++  + +GG   +  +  + + GR  + G++   
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 263 NLEKP 267
           ++  P
Sbjct: 267 DINGP 271

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 119 QHLIKI-LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQF 177
           + LIK+  D ++   +  G++ + G+TA   L++    K G+YV + AA+G +G ++  +
Sbjct: 107 EKLIKVPKDLDLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPW 165
Query: 178 AKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG 237
           A+ +G  V+G+  ++EK    + K G     NY  +   +   +    +G+D+ ++++G 
Sbjct: 166 ARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224
Query: 238 KMLDAVLLNMRIHGRIAVCGMIS 260
             L   L  +R  G  A  G  S
Sbjct: 225 DTLQKSLDCLRPRGMCAAYGHAS 247

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAV 170
           E +L   P++L       +PL++         LTA+  + +    + G+ V V AA   V
Sbjct: 129 EANLAPKPKNLSFEEAAAIPLTF---------LTAWQMVVDKLGVRPGDDVLVMAAGSGV 179
Query: 171 GQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF-PEGID 229
                Q AKL G  V+ +AGS++K+   K   G D+  NY   PD    ++R    +G D
Sbjct: 180 SVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNY-THPDWPKEVRRLTGGKGAD 237
Query: 230 IYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG 289
              ++ G    + V+      GRIA+ G  S Y     EG      V  +++ + G    
Sbjct: 238 KVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMA 292
Query: 290 DFYHQYPKFLELVMPAIKEGKL 311
                +P     ++  ++EGKL
Sbjct: 293 SKSRLFP-----ILRFVEEGKL 309

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 144  TAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG 203
            TAY  L      + GE V + + SG VGQ     A   GC V  + GS EK   L+ +F 
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 204  FDDAFNYKKEPDL---DAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
              D   +    D       L+    +G+D+   ++  + L A +  +  HGR    G   
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFD 1773
Query: 261  QYNLEKPEGVHNL-MQVVGKRIRMEGFLAGDFYHQ----YPKFLELVMPAIKEGKLVYVE 315
              N       H L M V  K +   G L    + +    + +  EL+   I+EG +  ++
Sbjct: 1774 LSN------NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLK 1827
Query: 316  DIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
                   K  +A   +  G+++GK ++ V  E
Sbjct: 1828 CTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 24/199 (12%)
Query: 96  NYKKDDLVWGLT---SWEEYSLIQS------PQHLIKILDTNVPLSYYTGILGMPGLTAY 146
            Y   D V GL    ++ EY L+ +      P+    +    +P +++T          +
Sbjct: 106 GYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT---------VW 156
Query: 147 GGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD 206
             L++     +GE V +   +  +G    Q A+  G  V  +AGS  K    + + G   
Sbjct: 157 ANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKR 215
Query: 207 AFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEK 266
             NY+ E D  A +K    +G+DI  + +G    +  + ++   G +++   +     EK
Sbjct: 216 GINYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEK 274
Query: 267 PEGVHNLMQVVGKRIRMEG 285
                NL  +  KR+ + G
Sbjct: 275 ----VNLSPIXVKRLTVTG 289

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           GLTA+  L E    + G+ V V   +G V     Q AK  G  V+ ++ S+EK++     
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 202 FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQ 261
            G D   N  +E  ++         G D   E  GG  L   L  +   GRI+V G++  
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 262 YNLEKPEG 269
           + +  P G
Sbjct: 292 FEVSGPVG 299

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 62  RMSKLDKPSFVASFNPGEPL-SGY---GVSKVLDSTHPNYKKDDLVWGLTSWEEYS-LIQ 116
           R   +D P       P  PL  G+   G+ + L  +   Y+  D V    ++  ++ ++ 
Sbjct: 50  RQGNIDNP-------PKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVC 102
Query: 117 SPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQ 176
           +P   +  +  ++  S       M  +TAY  L+E+ + ++G  V V +A G VGQ V Q
Sbjct: 103 TPVEFVYKIPDDMSFSE-AAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQ 161
Query: 177 FAKLVGCYVVGSAGSKEKVNLLKNKFG--FDDAFNYKKEPDLDAALKRCFPEGIDIYFEN 234
               V    V    S  K   +K+     FD   +Y +E      +KR   EG+DI  + 
Sbjct: 162 LCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQE------VKRISAEGVDIVLDC 215
Query: 235 VGG 237
           + G
Sbjct: 216 LCG 218

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
            G+  LTA+  L E+     GE V + +A+G VG      AK++G  +  +AGS  K  +
Sbjct: 19  FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM 78
Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKML 240
           L ++ G +   + +     D  L+     G+D+   ++ G+ +
Sbjct: 79  L-SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAI 120

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKN 200
           LTAY  L +L   + GE + V +A+G VG    Q A+ +G   Y   S    + V L + 
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSRE 390
Query: 201 KFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
                   +++++      L      G+D+   ++ G+  DA L  +   GR    G   
Sbjct: 391 HLASSRTCDFEQQ-----FLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTD 445
Query: 261 QYNLEKPEGVH--------NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV 312
             +  +    H        + ++   +RI       G+  H+    +EL    + E   V
Sbjct: 446 VRDPVEVADAHPGVSYQAFDTVEAGPQRI-------GEMLHE---LVELFEGRVLEPLPV 495
Query: 313 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP 346
              D+     +AP AL  +   ++VGK ++ + P
Sbjct: 496 TAWDV----RQAPEALRHLSQARHVGKLVLTMPP 525

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	347
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	0.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-177
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-171
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-100
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-25
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	1e-24
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	1e-24
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-23
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	5e-23
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	5e-23
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-22
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-22
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-21
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	6e-20
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-19
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	4e-19
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	9e-19
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-18
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	2e-18
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	7e-18
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-17
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-15
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-15
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	1e-14
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	4e-14
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	8e-14
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-12
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-12
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	3e-11
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	3e-11
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	5e-11
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	4e-10
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	4e-10
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	1e-09
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	1e-09
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-09
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	3e-09
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-08
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-08
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-08
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	9e-08
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-07
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-07
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-06
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	2e-06
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	4e-04

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  552 bits (1424), Expect = 0.0
 Identities = 235/345 (68%), Positives = 282/345 (81%), Gaps = 4/345 (1%)

Query: 6   AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSK 65
             +NKQVIL +YV+GFP ESD    T ++ L+VPEG+   VL+KNLYLSCDPYMR RM K
Sbjct: 2   TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNS-VLVKNLYLSCDPYMRIRMGK 60

Query: 66  LDK--PSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLI-QSPQHLI 122
            D    +   ++ PG+P+ GYGVS++++S HP+YKK DL+WG+ +WEEYS+I        
Sbjct: 61  PDPSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHF 120

Query: 123 KILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG 182
           KI  T+VPLSYYTG+LGMPG+TAY G YE+CSPK+GE VYVSAASGAVGQLVGQ AK++G
Sbjct: 121 KIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMG 180

Query: 183 CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDA 242
           CYVVGSAGSKEKV+LLK KFGFDDAFNYK+E DL AALKRCFP GIDIYFENVGGKMLDA
Sbjct: 181 CYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDA 240

Query: 243 VLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
           VL+NM +HGRIAVCGMISQYNLE  EGVHNL  ++ KR R++GF+  DFY +Y KFLE V
Sbjct: 241 VLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFV 300

Query: 303 MPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           +P I+EGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVVA E
Sbjct: 301 LPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  493 bits (1273), Expect = e-177
 Identities = 131/343 (38%), Positives = 190/343 (55%), Gaps = 18/343 (5%)

Query: 4   EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRM 63
           E  V  K   L  +  G P +SD ++ T  +    P      VLL+ L+LS DPYMR   
Sbjct: 3   EFMVKAKSWTLKKHFQGKPTQSDFELKTVEL----PPLKNGEVLLEALFLSVDPYMRIAS 58

Query: 64  SKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLI--QSPQHL 121
            +            G  + G  V++V++S +  +    +V   + W  + +   +  + L
Sbjct: 59  KR---------LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKL 109

Query: 122 IKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV 181
           +      +PLS   G +GMPGLTAY GL E+C  K GE V VSAA+GAVG +VGQ AKL 
Sbjct: 110 LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK 169

Query: 182 GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD 241
           GC VVG+AGS EK+  LK + GFD AFNYK    L+ ALK+  P+G D YF+NVGG+ L+
Sbjct: 170 GCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLN 228

Query: 242 AVLLNMRIHGRIAVCGMISQYNL-EKPEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFL 299
            VL  M+  G+IA+CG IS YN  ++     +   ++ K++R+EGF+   +      K L
Sbjct: 229 TVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKAL 288

Query: 300 ELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
             +M  + EGK+ Y E + +G E  P+A + +  G N+GK +V
Sbjct: 289 RDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  480 bits (1238), Expect = e-171
 Identities = 114/358 (31%), Positives = 180/358 (50%), Gaps = 17/358 (4%)

Query: 2   AGEEAVSNKQVILSN--YVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYM 59
           A   A+  ++V+L++     G P   + ++    +   + EG    V ++ LYLS DPYM
Sbjct: 2   AAAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYM 58

Query: 60  RGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTS-WEEYSLIQSP 118
           R RM++     ++  +   + + G G+  + +S H N  K D V      W+   ++   
Sbjct: 59  RCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVIL-DG 117

Query: 119 QHLIKILD--TNVPLSYYTGILGMPGLTAYGGLYELCSPKKG--EYVYVSAASGAVGQLV 174
             L K+     +  LSY+ G +GMPGLT+  G+ E      G  + + VS A+GA G + 
Sbjct: 118 NSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVA 177

Query: 175 GQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFE 233
           GQ    +GC  VVG  G+ EK  LL ++ GFD A NYKK+ ++   L+   P G+D+YF+
Sbjct: 178 GQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFD 236

Query: 234 NVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGV----HNLMQVVGKRIRMEGFLAG 289
           NVGG + D V+  M  +  I +CG ISQYN + P               + I  E FL  
Sbjct: 237 NVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVL 296

Query: 290 DFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
           ++  ++   +  +    KEGKL   E +  GLE   +A   + TG N+GKQ+V ++ E
Sbjct: 297 NYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  299 bits (769), Expect = e-100
 Identities = 91/356 (25%), Positives = 149/356 (41%), Gaps = 35/356 (9%)

Query: 8   SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDP----YMRGRM 63
             ++++++     F  E+            VP      +L++N ++  +     Y  GR 
Sbjct: 23  MMQKLVVTRLSPNFR-EAVTLSRD----CPVPLPGDGDLLVRNRFVGVNASDINYSAGRY 77

Query: 64  SKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLT--SWEEYSLIQSPQHL 121
                PS    F+ G    G  V  +  S    Y     V  +   S+ EY+++      
Sbjct: 78  D----PSVKPPFDIGFEGIG-EVVALGLSASARYTVGQAVAYMAPGSFAEYTVV-PASIA 131

Query: 122 IKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV 181
             +         Y   L + G TAY  L EL    +G+ V V+AA+G  GQ   Q +K  
Sbjct: 132 TPVPS---VKPEYLT-LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA 187

Query: 182 GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD 241
            C+V+G+  S EK   LK   G D   NYK E  +   LK+ +PEG+D+ +E+VGG M D
Sbjct: 188 KCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFD 245

Query: 242 AVLLNMRIHGRIAVCGMISQYN----LEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK 297
             +  +   GR+ V G IS Y     L   +      +++ K   ++GF    +  +Y  
Sbjct: 246 LAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQA 305

Query: 298 FLELVMPAIKEGKLVYVEDIA--------EGLEKAPSALVGIFTGQNVGKQLVVVA 345
            +  ++     G LV   D+          GLE    A+  ++ G+N GK +V + 
Sbjct: 306 AMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  103 bits (260), Expect = 2e-25
 Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 15/210 (7%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
            LTA   ++++   +  +   ++A +  + +L+   AK  G   + +    E++ LLK  
Sbjct: 150 PLTAIA-MFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-D 207

Query: 202 FGFDDAFNYKKEPDLDAALKR-CFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
            G     N  K PD +A L+     E   I+ + V G +  A+   M    R  + G + 
Sbjct: 208 IGAAHVLNE-KAPDFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLD 266

Query: 261 QYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP----KFLELVMPAIKEGKLVYVED 316
                    +    Q++ +   +EGF   ++  Q+       +        +G+      
Sbjct: 267 ----PDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVT 322

Query: 317 IAEGLEKAPSALVGIFTGQNVGKQLVVVAP 346
               L +A  A V     +  GK  V + P
Sbjct: 323 AVVPLAEA-IAWVPAELTKPNGK--VFIRP 349

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  101 bits (255), Expect = 1e-24
 Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 11/207 (5%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
            T +  L+++    +GE V +   +  +G    Q A+  G  V  +AGS  K    + + 
Sbjct: 153 FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL 211

Query: 203 GFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQY 262
           G     NY+ E D  A +K    +G+DI  + +G    +  + ++   G +++   +   
Sbjct: 212 GAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGGA 270

Query: 263 NLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP-----KFLELVMPAIKEGKLVYVEDI 317
                E V NL  ++ KR+ + G        +         L  V P ++ G +  V   
Sbjct: 271 ---VAEKV-NLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326

Query: 318 AEGLEKAPSALVGIFTGQNVGKQLVVV 344
               E    A   +  G +VGK ++ V
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVMLTV 353

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  101 bits (255), Expect = 1e-24
 Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 13/209 (6%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           + +  LTA+  + +    + G+ V V AA   V     Q AKL G  V+ +AGS++K+  
Sbjct: 147 IPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR 206

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFP-EGIDIYFENVGGKMLDAVLLNMRIHGRIAVC 256
            K   G D+  NY   PD    ++R    +G D   ++ G    + V+      GRIA+ 
Sbjct: 207 AK-ALGADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIA 264

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVED 316
           G  S Y             V  +++ + G             L  ++  ++EGKL  V  
Sbjct: 265 GASSGYEGTL-----PFAHVFYRQLSILGSTMAS-----KSRLFPILRFVEEGKLKPVVG 314

Query: 317 IAEGLEKAPSALVGIFTGQNVGKQLVVVA 345
               LE A      +   +  GK ++ V 
Sbjct: 315 QVLPLEAAAEGHRLLEERRVFGKVVLQVG 343

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 98.1 bits (245), Expect = 3e-23
 Identities = 43/252 (17%), Positives = 92/252 (36%), Gaps = 18/252 (7%)

Query: 102 LVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYTG-ILGMPGLTAYGGLYELCSPKKGEY 160
              GL +W   ++  S + LI++      +   +   LG+   TAY  L +    + G+ 
Sbjct: 115 ANAGLGTWRTEAVF-SEEALIQVPSD---IPLQSAATLGVNPCTAYRMLMDFEQLQPGDS 170

Query: 161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLD 217
           V  +A++  VGQ V Q A  +G   +     +  +  L +     G +     ++    +
Sbjct: 171 VIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPE 230

Query: 218 AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV 277
                       +    VGGK    +L  +   G +   G +++  +        +  ++
Sbjct: 231 MKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVAS-----VSLLI 285

Query: 278 GKRIRMEGFLAGDFYHQYP-----KFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIF 332
            K +++ GF    +   +      + +  +   I+ G+L         L+   SAL    
Sbjct: 286 FKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASM 345

Query: 333 TGQNVGKQLVVV 344
                 KQ++ +
Sbjct: 346 KPFISSKQILTM 357

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 98.3 bits (245), Expect = 5e-23
 Identities = 47/230 (20%), Positives = 75/230 (32%), Gaps = 31/230 (13%)

Query: 138 LGMPGLTAYGGLYELCS--PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV 195
            G+   TAY  L        K+G+ V +  ASG +G    QFA   G   +    S +K 
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266

Query: 196 NLLKNKFGFDDAFNYKKE----------------PDLDAALKRCF-PEGIDIYFENVGGK 238
            + +   G +   +   E                      ++     E IDI FE+ G +
Sbjct: 267 EICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE 325

Query: 239 MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 298
              A +   R  G I  C   S Y  E          +     R+ G    ++       
Sbjct: 326 TFGASVFVTRKGGTITTCASTSGYMHEYD-----NRYLWMSLKRIIGSHFANYRE----- 375

Query: 299 LELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQ-LVVVAPE 347
                  I +G++         LE    A   +    + GK  ++ +APE
Sbjct: 376 AWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCLAPE 425

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 98.4 bits (245), Expect = 5e-23
 Identities = 48/230 (20%), Positives = 74/230 (32%), Gaps = 31/230 (13%)

Query: 138 LGMPGLTAYGGLYELCSP--KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV 195
             +   TAY  L        K+G+ V +  ASG +G    QF K  G   V    S +K 
Sbjct: 199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE 258

Query: 196 NLLKNKFGFDDAFNYKKEPDLDAALKRCFP-----------------EGIDIYFENVGGK 238
             ++   G D   N  +    D                            DI FE+ G  
Sbjct: 259 AAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV 317

Query: 239 MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 298
                ++  R  G +  CG  S Y         +   +  K  ++ G    +      + 
Sbjct: 318 TFGLSVIVARRGGTVVTCGSSSGYLHT-----FDNRYLWMKLKKIVGSHGAN-----HEE 367

Query: 299 LELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV-APE 347
            +      + G +V        L +A  A   + T + VGK  V+  APE
Sbjct: 368 QQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMAPE 417

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 95.8 bits (239), Expect = 2e-22
 Identities = 55/208 (26%), Positives = 83/208 (39%), Gaps = 17/208 (8%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L   GLTA+  L E    + G+ V V    G V     Q AK  G  V+ ++ S+EK++ 
Sbjct: 170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDR 228

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFP-EGIDIYFENVGGKMLDAVLLNMRIHGRIAVC 256
                G D   N   E D    +       G D   E  GG  L   L  +   GRI+V 
Sbjct: 229 AF-ALGADHGINRL-EEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVI 286

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVED 316
           G++  + +  P     +  ++ K   ++G   G         LE ++ A+    L  V D
Sbjct: 287 GVLEGFEVSGP-----VGPLLLKSPVVQGISVGHRRA-----LEDLVGAVDRLGLKPVID 336

Query: 317 IAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           +     + P AL  +  G   GK  VV+
Sbjct: 337 MRYKFTEVPEALAHLDRGP-FGK--VVI 361

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 95.0 bits (237), Expect = 2e-22
 Identities = 49/227 (21%), Positives = 85/227 (37%), Gaps = 21/227 (9%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
             M  +TAY  L+E+ + ++G  V V +A G VGQ V Q    V    V    S  K   
Sbjct: 123 FPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEA 182

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
           +K+       F+     D    +KR   EG+DI  + + G      L  ++  G   + G
Sbjct: 183 IKD--SVTHLFDR--NADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYG 238

Query: 258 MISQYNLEKPEGVH-----------NLMQVVGKRIRMEGFLAGDFYHQYPK------FLE 300
             +    E                 N +++  +   + GF   +   +  +       +E
Sbjct: 239 SSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVE 298

Query: 301 LVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            ++    + K+  V D    LE+   A+  I    N+GK ++ V   
Sbjct: 299 KLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 93.6 bits (233), Expect = 1e-21
 Identities = 53/311 (17%), Positives = 95/311 (30%), Gaps = 42/311 (13%)

Query: 68  KPSFVASFNPGEPLS--GYGVSKVLDSTHPN---YKKDDLV----WGLTSWEEYSLIQSP 118
           KP+    F   EP +  G      +     N    +  D V        +W  ++L  + 
Sbjct: 60  KPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALG-ND 118

Query: 119 QHLIKILDTNVPLSYYT--GI-------LGMPGLTAYGGLYELCSPKKGE-YVYVSAASG 168
              IK+ +     +     G+       + +  LTAY  L        G+ +   +  + 
Sbjct: 119 DDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTS 178

Query: 169 AVGQLVGQFAKLVGCYVVGSAGSK----EKVNLLKNKFGFDDAFNYKKE--PDLDAALK- 221
           AVG+   Q  KL+    +     +    E V  LK + G        +    +    +K 
Sbjct: 179 AVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSREFGPTIKE 237

Query: 222 --RCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGK 279
             +       +    VGGK    +   +  +G +   G +S                + K
Sbjct: 238 WIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS-----FQPVTIPTSLYIFK 292

Query: 280 RIRMEGFLAGDFYHQYP----KFLELVMPAIKEGKLVYVEDIA---EGLEKAPSALVGIF 332
                GF   +            L  ++   +EGKL   + I    +G +          
Sbjct: 293 NFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGV 352

Query: 333 TGQNVGKQLVV 343
                GKQL+ 
Sbjct: 353 ANSKDGKQLIT 363

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 93.0 bits (232), Expect = 1e-21
 Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 16/214 (7%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L     T Y         + GE V V  A+G +G    Q AK +G  V+           
Sbjct: 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF 199

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKR-CFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVC 256
           +K   G D     ++      A++      G+D+  + +GG   D  +  +   GR+ V 
Sbjct: 200 VK-SVGADIVLPLEE--GWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVV 256

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFL----ELVMPAIKEGKLV 312
           G  +      P     + +++ +   + G   G+F   +  +L      +   + EG   
Sbjct: 257 GFAAG---GIPT--IKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRP 311

Query: 313 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP 346
            V      L +   AL     G+  GK  +V+ P
Sbjct: 312 PVSARI-PLSEGRQALQDFADGKVYGK--MVLVP 342

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 88.4 bits (220), Expect = 6e-20
 Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 12/210 (5%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           +G+P  TAY  L      K GE V V  ASG VG    Q A+  G  ++G+AG++E   +
Sbjct: 151 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 210

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKR-CFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVC 256
           +  + G  + FN+++  +    +K+    +GIDI  E +    L   L  +   GR+ V 
Sbjct: 211 VL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 268

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK-FLELVMPAIKEGKLVYVE 315
           G      +       N    + K   + G        +  + +   +   ++ G L  V 
Sbjct: 269 GSRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVI 321

Query: 316 DIAEGLEKAPSALVGIF-TGQNVGKQLVVV 344
                LEK   A   I       GK ++++
Sbjct: 322 GSQYPLEKVAEAHENIIHGSGATGKMILLL 351

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 61/286 (21%), Positives = 121/286 (42%), Gaps = 26/286 (9%)

Query: 73  ASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTS---WEEYSLIQSPQHLIKILDTNV 129
           AS   G   SG  V+++      ++K  D    L       +Y  +     L+ I +   
Sbjct: 79  ASNILGLEASG-HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPE-GLLMPIPEG-- 134

Query: 130 PLSYYTGILGMP--GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVG 187
            L+       +P   LTA+  L+ + + + G+YV + A    VG    Q  ++ G   + 
Sbjct: 135 -LTLTQA-AAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV 192

Query: 188 SAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF-PEGIDIYFENVGGKMLDAVLLN 246
           +AGS++K+ + + K G    FNYKKE D   A  +     G+++  + +GG   +  +  
Sbjct: 193 TAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNC 250

Query: 247 MRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP-----KFLEL 301
           + + GR  + G++   ++  P       +++ KR  +   L     ++Y       F E 
Sbjct: 251 LALDGRWVLYGLMGGGDINGP----LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQ 306

Query: 302 VMPAI---KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           ++P        +L+ V D    + +   A   +   +N+GK ++ +
Sbjct: 307 ILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 85.7 bits (213), Expect = 4e-19
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 6/153 (3%)

Query: 111 EYSLIQSPQHLIKILD--TNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASG 168
           +YS I S   ++K+    ++  L  Y   L +  LTA     E    KKG+YV + AA+G
Sbjct: 101 QYSKISSQGPVMKLPKGTSDEELKLYAAGL-LQVLTALSFTNEAYHVKKGDYVLLFAAAG 159

Query: 169 AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF-PEG 227
            VG ++ Q  K+ G + +  A + EK+ + K ++G +   N  KE D+   + +    +G
Sbjct: 160 GVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKG 217

Query: 228 IDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
           +D  F++VG    +  L  ++  G     G  S
Sbjct: 218 VDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 84.6 bits (210), Expect = 9e-19
 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 3/120 (2%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           G+TA   L++    K G+YV + AA+G +G ++  +A+ +G  V+G+  ++EK    + K
Sbjct: 130 GMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-K 188

Query: 202 FGFDDAFNYKKEPDLDAALKRCFP-EGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
            G     NY  + D    ++     +G+D+ ++++G   L   L  +R  G  A  G  S
Sbjct: 189 LGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 27/218 (12%), Positives = 83/218 (38%), Gaps = 17/218 (7%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           + +  LTA+    E  + ++ + + V+A   A+G L  Q ++++   ++    + +    
Sbjct: 125 MYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE 184

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKR-CFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVC 256
           L  + G     +      L   +       G D   +++GG   + +  ++R +G     
Sbjct: 185 LL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTI 242

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP-----KFLELVMPAIKEGKL 311
           G++S       +     + V   ++    F    +  +       +    ++  ++  +L
Sbjct: 243 GLLS-----GIQVNWAEI-VTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQL 296

Query: 312 VYVEDIAE--GLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            +++ +     L    +A+  + + +    ++ + + E
Sbjct: 297 RFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE 333

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 3/122 (2%)

Query: 140 MPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK 199
           + GLT    L +    K GE +   AA+G VG L  Q+AK +G  ++G+  S EK    K
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182

Query: 200 NKFGFDDAFNYKKEPDLDAALKRCFP-EGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGM 258
              G  +  +Y  E D+   +      +   + ++ VG       L ++   G +   G 
Sbjct: 183 -ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240

Query: 259 IS 260
            S
Sbjct: 241 AS 242

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 82.3 bits (204), Expect = 7e-18
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           GLT Y  L +    K  E     AA+G VG +  Q+AK +G  ++G+ G+ +K      K
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-K 183

Query: 202 FGFDDAFNYKKEPDLDAALKRCFP-EGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
            G     NY++E DL   LK     + + + +++VG    +  L  ++  G +   G  S
Sbjct: 184 AGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS 242

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 42/219 (19%), Positives = 79/219 (36%), Gaps = 24/219 (10%)

Query: 140 MPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK 199
           +  +TA+ GL +    + G+ V +    G VG +  Q A   G  V  +A     +  ++
Sbjct: 133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDLEYVR 191

Query: 200 NKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI 259
              G       ++  D  A       +G D+ ++ +GG +LDA    ++  G +  C   
Sbjct: 192 -DLGATPIDASREPEDYAAEHTA--GQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGW 248

Query: 260 SQYNLEKPEGVHNLMQVVGKRIRMEG------FLAGDFYHQYPKFLELVMPAIKEGKL-V 312
                    G H L  +  K+    G       LA +    + + L      ++ GKL  
Sbjct: 249 ---------GTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAP 299

Query: 313 YVEDIAEGLEKAPSALVGIF----TGQNVGKQLVVVAPE 347
            ++     + +  SA   +       +  GK  + V   
Sbjct: 300 RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGH 338

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 75.9 bits (187), Expect = 1e-15
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 30/231 (12%)

Query: 138 LGMPGLTAYGGLYEL------------CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYV 185
           L     TA   +  L             +  K  YV V   S A   +  Q  +L G   
Sbjct: 133 LPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIP 192

Query: 186 VGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG----KMLD 241
           + +  S    +L K   G ++ F+Y + P+L   ++      +    + +          
Sbjct: 193 IATC-SPHNFDLAK-SRGAEEVFDY-RAPNLAQTIRTYTKNNLRYALDCITNVESTTFCF 249

Query: 242 AVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLM---QVVGKRIRMEGFLAGDFYHQY--- 295
           A +   R  G         ++   +     +      + G+              +    
Sbjct: 250 AAIG--RAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQF 307

Query: 296 -PKFLELVMPAIKEGKL--VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV 343
                 +    +++G+L    +  +  G +     +  +  G+  G++LVV
Sbjct: 308 GEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVV 358

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 75.0 bits (184), Expect = 3e-15
 Identities = 35/183 (19%), Positives = 61/183 (33%), Gaps = 17/183 (9%)

Query: 140 MPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK 199
           +  LTA G + E    +    +  +AA+  +GQ++ Q     G  +V     +E+ +LLK
Sbjct: 155 VNPLTALG-MVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK 213

Query: 200 NKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI 259
              G     N      +    +     G  I F+  GG  L   +L              
Sbjct: 214 -AQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREY 272

Query: 260 SQYNLEKPEGVH----------NLMQVVGKRIRMEGFLAGDFYHQYP-----KFLELVMP 304
           S+Y     + V+             +  G    M G+L   F  +          + V+ 
Sbjct: 273 SRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVA 332

Query: 305 AIK 307
            +K
Sbjct: 333 ELK 335

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 19/211 (9%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
             +  LTAY  L +    + GE V V AA+GA+G    Q A+ +G  V+ +A   EK+ L
Sbjct: 107 FPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 165

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
                G ++A  Y + P+   A       G+D+  E V GK ++  L  +   GR+   G
Sbjct: 166 PL-ALGAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK----FLELVMPAIKEGKLVY 313
                  E        ++++ + + + GF       +        L  ++P +   +L  
Sbjct: 219 AAEG---EVAPI--PPLRLMRRNLAVLGF-WLTPLLREGALVEEALGFLLPRL-GRELRP 271

Query: 314 VEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
           V        +A +A   +    + GK +V +
Sbjct: 272 VVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 71.1 bits (175), Expect = 4e-14
 Identities = 52/207 (25%), Positives = 76/207 (36%), Gaps = 22/207 (10%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L   GLTA   L      K+G+ V + A +G VG L  Q AK  G  V+ +A SK     
Sbjct: 134 LPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAF 191

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
           LK   G +   NY +E  L A         +D   + VGG +    +  ++  G I    
Sbjct: 192 LK-ALGAEQCINYHEEDFLLAI-----STPVDAVIDLVGGDVGIQSIDCLKETGCIV--- 242

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDI 317
                ++        +     K  R  G L         + L  +   + E KL      
Sbjct: 243 -----SVPTITAGRVIEVAKQKHRRAFGLLK----QFNIEELHYLGKLVSEDKLRIEISR 293

Query: 318 AEGLEKAPSALVGIFTGQNVGKQLVVV 344
              L +A +A   + TG   GK  +V 
Sbjct: 294 IFQLSEAVTAHELLETGHVRGK--LVF 318

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 70.9 bits (174), Expect = 8e-14
 Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 20/220 (9%)

Query: 138 LGMPGLTAYGGLYEL----CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE 193
           L    LTA+  + ++         G+ V +  ASG VG    Q  K    +V     S++
Sbjct: 160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQD 218

Query: 194 KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL--LNMRIHG 251
              L++ K G DD  +YK    ++  LK    +  D   +NVGG         L      
Sbjct: 219 ASELVR-KLGADDVIDYKSG-SVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWSGA 274

Query: 252 RIAVCGMISQYNLEKPEGVHNLMQVVG--KRIRMEGFLAGDFYHQY-----PKFLELVMP 304
                      N+++      ++Q         ++ F  G  Y           L+ +  
Sbjct: 275 TYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAE 334

Query: 305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV 344
            +  GK+  V +      K P A + +  G   GK   V+
Sbjct: 335 LVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGK--TVI 372

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 10/120 (8%)

Query: 142 GLTAYGGLYE------LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV 195
           G+TAY  L++        +  +G+ + +   +G VG +  Q AK  G  V+ +A   E +
Sbjct: 129 GITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI 188

Query: 196 NLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM-LDAVLLNMRIHGRIA 254
              K K G D   N+K+   L    K    E +D  F      M  D ++  ++  G IA
Sbjct: 189 EWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIA 245

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 20/238 (8%)

Query: 111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAV 170
           EY ++      +  L   +        L   G+T Y  + +  S    + + V  A G +
Sbjct: 128 EYVIV-PHYKYMYKLR-RLNAVE-AAPLTCSGITTYRAVRKA-SLDPTKTLLVVGAGGGL 183

Query: 171 GQLVGQFAK-LVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGID 229
           G +  Q AK + G  ++G    +E V   K + G D   N   +  L    +    +G+D
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASMQDPLAEIRRITESKGVD 242

Query: 230 IYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLA 288
              +     K L      +   G+  + G+         +  ++   +    I+  G L 
Sbjct: 243 AVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG------ADLHYHAPLITLSEIQFVGSLV 296

Query: 289 GDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP 346
           G+    +   + L     + GK+  +      LE+A  A+  +   + +G+   V+ P
Sbjct: 297 GN-QSDFLGIMRLA----EAGKVKPMITKTMKLEEANEAIDNLENFKAIGR--QVLIP 347

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 10/124 (8%)

Query: 139 GMP--GLTAYGGLYEL-----CSPKKGEYVYVSAASGAVGQLVGQFAK-LVGCYVVGSAG 190
            +P   +TA+   ++        P     + +   +G VG +  Q A+      V+ +A 
Sbjct: 146 ALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS 205

Query: 191 SKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIH 250
             E    +K   G     ++  +P               ++      K    +   +   
Sbjct: 206 RPETQEWVK-SLGAHHVIDH-SKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ 263

Query: 251 GRIA 254
           GR  
Sbjct: 264 GRFC 267

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 62.7 bits (153), Expect = 3e-11
 Identities = 70/299 (23%), Positives = 114/299 (38%), Gaps = 64/299 (21%)

Query: 77  PGEPLSGYGVSKVLDSTHPNYKKDDLV----WGL--TSW---EEYSLIQSPQHLIKILDT 127
           PG  L+G     V+ S HP +++ D V    + +  T +    EY+ +   + L+ +   
Sbjct: 64  PGIDLAG----VVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHG-EWLVPLPKG 118

Query: 128 NVPLS-YYTGILGMPGLTAYGG---LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC 183
              L+      +G  G TA      L E     +   V V+ A+G VG L        G 
Sbjct: 119 ---LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY 175

Query: 184 YVVGSAGSKEKVNLLKNKFG------FDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG 237
            V  S G   + + L+   G       +D    +  P LD   K+ +   +D     VGG
Sbjct: 176 TVEASTGKAAEHDYLR-VLGAKEVLAREDVMAERIRP-LD---KQRWAAAVD----PVGG 226

Query: 238 KMLDAVLLNMRIHGRIAVCGMISQYNLE-----------KPEGVHNLMQVVGKRIRMEGF 286
           + L  VL  MR  G +AV G+     +               G+ ++   +  R+R+   
Sbjct: 227 RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWER 286

Query: 287 LAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA 345
           LAGD     P    +             ++I   L + P AL  I  G+  G+ +V +A
Sbjct: 287 LAGDL---KPDLERI------------AQEI--SLAELPQALKRILRGELRGRTVVRLA 328

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 63.0 bits (153), Expect = 5e-11
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 12/128 (9%)

Query: 129  VPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS 188
            VP+ Y          TAY  L      + GE V + + SG VGQ     A   GC V  +
Sbjct: 1648 VPIVY---------TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTT 1698

Query: 189  AGSKEKVNLLKNKF-GFDDA-FNYKKEPDL-DAALKRCFPEGIDIYFENVGGKMLDAVLL 245
             GS EK   L+ +F   D+  F   ++       L+    +G+D+   ++  + L A + 
Sbjct: 1699 VGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVR 1758

Query: 246  NMRIHGRI 253
             +  HGR 
Sbjct: 1759 CLAQHGRF 1766

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 42/226 (18%), Positives = 75/226 (33%), Gaps = 26/226 (11%)

Query: 111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAV 170
            + ++     ++K+      L     +    G TAY    E      G+ V +  A G +
Sbjct: 151 SHIVLDPETDVLKV-SEKDDLDV-LAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPL 207

Query: 171 GQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFN---YKKEPDLDAALKRCFPE 226
           G      A+ +G   V+  AGS  ++ L + + G D   N      E    A +      
Sbjct: 208 GLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRETSVEERRKAIMDITHGR 266

Query: 227 GIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEG 285
           G D   E  G  + L      +R  G  +V G+      + P        +V K    +G
Sbjct: 267 GADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP---QDPVPFKVYEWLVLKNATFKG 323

Query: 286 FLAGDFYHQYPKFLELVMPAIKEGKL---------VYVEDIAEGLE 322
               D  H + K + +                   + +++  + LE
Sbjct: 324 IWVSDTSH-FVKTVSITS----RNYQLLSKLITHRLPLKEANKALE 364

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
           LTA+  L E+     GE V + +A+G VG      AK++G  +  +AGS  K  +L  + 
Sbjct: 24  LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL 82

Query: 203 GFDDAFN 209
           G +   +
Sbjct: 83  GVEYVGD 89

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 60/296 (20%), Positives = 108/296 (36%), Gaps = 62/296 (20%)

Query: 77  PGEPLSGYGVSKVLDSTHPNYKKDDLV----WGL--TSW---EEYSLIQSPQHLIKILDT 127
            G   +G     V+ S  P + + D V    + L  +      EY+ +     L+ +   
Sbjct: 65  LGIDAAG----TVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPG-DWLVPLPQN 119

Query: 128 NVPLS-YYTGILGMPGLTA---YGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC 183
              LS     + G  G TA      L +     +   V V+ A+G VG +        G 
Sbjct: 120 ---LSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY 176

Query: 184 YVVGSAGSKEKVNLLKNKFG------FDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG 237
            VV S G++E  + LK + G       +D ++   +  L    K+ +   +D     VGG
Sbjct: 177 DVVASTGNREAADYLK-QLGASEVISREDVYDGTLKA-LS---KQQWQGAVD----PVGG 227

Query: 238 KMLDAVLLNMRIHGRIAVCGMISQYNLE-----------KPEGVHNLMQVVGKRIRMEGF 286
           K L ++L  ++  G +AV G+     +               G+ ++   +  R  +   
Sbjct: 228 KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWER 287

Query: 287 LAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
           ++ D      + L +V   +              LE+ P AL  I   +  G+ +V
Sbjct: 288 MSSDLKP--DQLLTIVDREV-------------SLEETPGALKDILQNRIQGRVIV 328

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 63/289 (21%), Positives = 95/289 (32%), Gaps = 51/289 (17%)

Query: 77  PGEPLSGYGVSKVLDSTHPNYKKDDLV----WGL--TSW---EEYSLIQSPQHLIKILDT 127
           PG   +G     V  S  P +     V    WG+    W    E + ++    L+  L  
Sbjct: 61  PGIDFAG----TVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKG-DWLVA-LPA 114

Query: 128 NVPLSYYTGILGMPGLTAYGGLYELCS---PKKGEYVYVSAASGAVGQLVGQFAKLVGCY 184
            +       I+G  G TA   +  L       +   V V+ ASG VG         +G  
Sbjct: 115 GLSSRN-AMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQ 173

Query: 185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVL 244
           V   +G +     LK   G +   +  +  +     K+ +   ID     VG K+L  VL
Sbjct: 174 VAAVSGRESTHGYLK-SLGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLAKVL 228

Query: 245 LNMRIHGRIAVCGMISQYNLE-----------KPEGVHNLMQVVGKRIRMEGFLAGDFYH 293
             M   G +A CG+   + L            + +GV ++M    +R      L  D   
Sbjct: 229 AQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDL-- 286

Query: 294 QYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 342
               F                 +I   L  AP     I   Q  G+ LV
Sbjct: 287 -PESFYAQA-----------ATEI--TLADAPKFADAIINNQVQGRTLV 321

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 47/243 (19%), Positives = 101/243 (41%), Gaps = 29/243 (11%)

Query: 111 EYSLIQSPQHLIKILDTNVPLSYYT--GILGMPGLTAYGGLYE-LCSPKKGEYVYVSAAS 167
           E+    S + +IK+   ++          L   G+TAY  + +   +   G YV +    
Sbjct: 139 EFMRT-SHRSVIKLPK-DISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV- 195

Query: 168 GAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE 226
           G +G +  Q  K++    V+     +EK+ L + + G D   + +++P +   ++     
Sbjct: 196 GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDARRDP-VKQVMELTRGR 253

Query: 227 GIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVH-NLMQVVGKRIRME 284
           G+++  + VG    +D     +   GR+ + G            +    ++V+   +  E
Sbjct: 254 GVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY--------GGELRFPTIRVISSEVSFE 305

Query: 285 GFLAGDFYHQYPKFLELVMPAIKEGKL-VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV 343
           G L G+ Y +  + + L      +GK+ V V+     L++    L  +  G+ +G+   V
Sbjct: 306 GSLVGN-YVELHELVTLA----LQGKVRVEVDIH--KLDEINDVLERLEKGEVLGR--AV 356

Query: 344 VAP 346
           + P
Sbjct: 357 LIP 359

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 34/198 (17%), Positives = 73/198 (36%), Gaps = 16/198 (8%)

Query: 155 PKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKE 213
            + G+ V +    G +G       K  G   V+ S  S+ + NL K + G D   +  KE
Sbjct: 211 IRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE 268

Query: 214 PDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL 273
             ++A L      G  ++ E  G   L    +   I     +   ++       +     
Sbjct: 269 NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTG 328

Query: 274 MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY----VEDIAEGLEKAPSALV 329
                +R ++ G      +  +P+ + L+   +   K++     +E+I E +++  +   
Sbjct: 329 EVFQVRRAQIVGSQGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKRLQT--- 385

Query: 330 GIFTGQNVGKQLVVVAPE 347
                +++ K  V +  E
Sbjct: 386 ----DKSLVK--VTMLNE 397

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 23/185 (12%)

Query: 154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK 212
            P  G+ V ++ A G +G L    AK  G   V+ S  S  +  L K K G D   N  +
Sbjct: 164 GPISGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFE 221

Query: 213 EPDLDAALKRCFPEGIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVH 271
           E  +   +      G+D++ E  G  K L+  L  +   GR+++ G+           + 
Sbjct: 222 EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL-----YPGKVTID 276

Query: 272 NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL----------VYVEDIAEGL 321
               ++ K + + G      +  +     L    ++ GKL             +   E  
Sbjct: 277 FNNLIIFKALTIYGITGRHLWETWYTVSRL----LQSGKLNLDPIITHKYKGFDKYEEAF 332

Query: 322 EKAPS 326
           E   +
Sbjct: 333 ELMRA 337

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 47/228 (20%), Positives = 78/228 (34%), Gaps = 56/228 (24%)

Query: 143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF 202
           LTAY  L +L   + GE + V +A+G VG    Q A+ +G  V  +A   +         
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-----WQAV 385

Query: 203 GFDDA--FNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
                   + +        L      G+D+   ++ G+  DA L  +   GR        
Sbjct: 386 ELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRF------- 438

Query: 261 QYNLEKPEGVHNLMQVVGKR-----IRMEGFLAG------DFYHQYPK----FLELVMPA 305
              LE           +GK      + +     G      D     P+     L  ++  
Sbjct: 439 ---LE-----------LGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVEL 484

Query: 306 IKEGKL------VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE 347
            +   L       +  D+ +    AP AL  +   ++VGK LV+  P 
Sbjct: 485 FEGRVLEPLPVTAW--DVRQ----APEALRHLSQARHVGK-LVLTMPP 525

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 31/204 (15%), Positives = 59/204 (28%), Gaps = 16/204 (7%)

Query: 140 MPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK 199
            P LTA+    E     K   V +    GAV  L+ Q     G  V     +     L  
Sbjct: 126 CPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDL-VSASLSQALAA 182

Query: 200 NKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI 259
            K G    +    +            +     F+ V  +   A++ +++ +G I      
Sbjct: 183 -KRGVRHLYREPSQ----------VTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDR 231

Query: 260 SQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAE 319
               ++           +      +     D+     +  E ++  I +GK+        
Sbjct: 232 IPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQ-GEALLTLIAQGKMEIAAPDIF 290

Query: 320 GLEKAPSALVGIFTGQNVGKQLVV 343
             E+   AL      +     L +
Sbjct: 291 RFEQMIEALDHSEQTKLKTV-LTL 313

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 52.2 bits (126), Expect = 9e-08
 Identities = 27/182 (14%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEP 214
             G+ V ++ A G +G +     +  G   ++ S  +  ++   +  +  D   N  +E 
Sbjct: 163 VSGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPLEE- 218

Query: 215 DLDAALKRCFPEGIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL 273
           DL   ++R    G+++  E  G    +   L+ +   G   + G+        P      
Sbjct: 219 DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGI-----PSDPIRFDLA 273

Query: 274 MQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL---------VYVEDIAEGLEKA 324
            ++V + I   G      +  + +   L    +  G++         + +    E     
Sbjct: 274 GELVMRGITAFGIAGRRLWQTWMQGTAL----VYSGRVDLSPLLTHRLPLSRYREAFGLL 329

Query: 325 PS 326
            S
Sbjct: 330 AS 331

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 29/189 (15%)

Query: 151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFN 209
           +L   K G  V +    G +G L  Q A+L G   V+ S     K  L + + G     +
Sbjct: 176 DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVD 233

Query: 210 YKKEPDLDAALKR---CFPEGIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLE 265
                D+  A+       P G+D+  E  G  + +       +  G + + G+     L 
Sbjct: 234 PSAG-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGV-----LP 287

Query: 266 KPEGVH-NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL---------VYVE 315
           + E V      ++ + +R+ G         + +  +L    +  G +         + ++
Sbjct: 288 QGEKVEIEPFDILFRELRVLGSFINP--FVHRRAADL----VATGAIEIDRMISRRISLD 341

Query: 316 DIAEGLEKA 324
           +  + +   
Sbjct: 342 EAPDVISNP 350

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 37/200 (18%), Positives = 65/200 (32%), Gaps = 19/200 (9%)

Query: 155 PKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKE 213
             + + V +  A G +G L  Q A  +G   V     S EK+ L K  FG    FN  + 
Sbjct: 158 GCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM 215

Query: 214 PDLDAALKRCFPEGIDIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHN 272
                           +  E  G  + ++  +     H ++A+ G + Q   +       
Sbjct: 216 SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQ---DLHLTSAT 272

Query: 273 LMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAE------GLEKAPS 326
             +++ K + + G           +  E     + E KL     +          E    
Sbjct: 273 FGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKL----SLEPLIAHRGSFESFAQ 328

Query: 327 ALVGIFTGQNVGKQLVVVAP 346
           A+  I      GK  V++ P
Sbjct: 329 AVRDIARNAMPGK--VLLIP 346

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 44/237 (18%), Positives = 87/237 (36%), Gaps = 23/237 (9%)

Query: 111 EYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSP-KKGEYVYVSAASGA 169
           EY ++ S +HL+ I   ++       +    GLT Y  +  +      G    V    G 
Sbjct: 127 EYMIVDSARHLVPI--GDLDPVAAAPLTD-AGLTPYHAISRVLPLLGPGSTAVVIGV-GG 182

Query: 170 VGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGI 228
           +G +  Q  + V    V+      +++ L + + G D A         DA  +    +G 
Sbjct: 183 LGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSGAGA-ADAIRELTGGQGA 240

Query: 229 DIYFENVG-GKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFL 287
              F+ VG    +D     + + G I+V G+ +               ++     +    
Sbjct: 241 TAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHA------GAHAKVGFFMIPFGASVVTPY 294

Query: 288 AGDFYHQYPKFLELVMPAIKEGKL-VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV 343
            G    +  + + L     + G+L ++ E     L++ P+A   +  G   G+ +VV
Sbjct: 295 WGT-RSELMEVVALA----RAGRLDIHTETF--TLDEGPAAYRRLREGSIRGRGVVV 344

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 22/192 (11%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           G+T Y  L    +   G +V +S A+G +G L  Q+AK +G  V+G  G + K  L +  
Sbjct: 155 GITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S 212

Query: 202 FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM-LDAVLLNMRIHGRIAVCGMIS 260
            G +   ++ KE D+  A+ +    G          +  ++A    +R +G   + GM  
Sbjct: 213 IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM-- 270

Query: 261 QYNLEKPEGVHNLMQVVGKRIRMEGFLAG---------DFYHQYPKFLELVMPAIKEGKL 311
                  +   ++   V K I + G   G         DF+ +      LV   IK   L
Sbjct: 271 ---PAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARG-----LVKSPIKVVGL 322

Query: 312 VYVEDIAEGLEK 323
             + +I E +EK
Sbjct: 323 STLPEIYEKMEK 334

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 42/194 (21%), Positives = 69/194 (35%), Gaps = 30/194 (15%)

Query: 142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK 201
           G+T Y  L      K GE+V +    G +G +  Q+AK +G  VV      EK+ L K +
Sbjct: 150 GVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E 206

Query: 202 FGFDDAFNYKKEPDLDAALKRCFPEGID-IYFENVGGKMLDAVLLNMRIHGRIAVCGMIS 260
            G D   N  KE D    +K     G+       V      +   ++R  G   + G+  
Sbjct: 207 LGADLVVNPLKE-DAAKFMKEKVG-GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGL-- 262

Query: 261 QYNLEKPEGVH--NLMQVVGKRIRMEGFLAG---------DFYHQYPKFLELVMPAIKEG 309
                 P       +   V   I++ G + G          F  +       V   I+  
Sbjct: 263 ------PPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAE-----GKVKTIIEVQ 311

Query: 310 KLVYVEDIAEGLEK 323
            L  + ++ + + K
Sbjct: 312 PLEKINEVFDRMLK 325

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	347
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.91
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.91
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.83
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.8
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.8
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.58
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.53
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.43
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.41
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.23
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.2
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.18
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.1
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.06
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.05
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.04
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.03
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.03
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.01
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.99
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.98
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.95
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.94
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.93
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.92
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.91
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.91
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.91
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.91
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.91
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.9
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.89
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.89
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.89
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.89
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.89
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.88
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.88
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.88
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.87
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.86
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.85
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.84
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.84
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.84
1spx_A	278	Short-chain reductase family member (5L265); paral	97.84
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.84
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.84
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.84
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.83
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.82
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.81
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.81
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.79
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.79
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.79
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.79
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.78
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.77
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.77
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.76
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.75
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.75
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.75
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.74
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.74
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.74
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.74
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.73
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.73
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.73
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.73
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.72
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.72
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.71
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.71
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.7
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.7
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.7
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.7
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.7
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.7
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.69
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.69
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.69
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.69
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.69
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.69
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.69
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.69
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.69
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.68
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.68
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.68
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.68
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.68
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.68
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.67
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.67
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.67
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.67
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.67
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.67
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.67
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.67
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.66
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.66
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.66
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.66
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.66
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.64
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.64
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.64
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.64
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.64
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.64
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.63
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.63
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.63
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.62
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.62
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.62
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.62
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.62
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.61
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.61
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.61
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.6
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.6
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.59
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.58
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.58
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.57
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.57
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.57
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.57
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.57
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.57
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.56
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.56
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.56
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.56
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.55
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.55
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.55
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.55
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.55
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.55
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.54
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.54
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.54
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.54
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.53
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.53
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.52
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.51
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.5
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.5
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.48
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.48
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.48
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.47
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.47
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.46
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.46
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.46
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.46
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.46
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.45
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.44
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.44
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.44
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.43
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.43
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.43
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.43
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.43
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.42
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.42
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.41
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.41
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.4
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.4
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.39
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.39
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.39
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.38
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.37
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.37
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.37
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.36
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.36
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.36
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.35
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.34
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.34
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.34
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.33
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.32
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.32
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.31
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.31
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.31
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.3
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.3
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.3
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.29
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.29
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.26
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.26
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.26
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.25
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.25
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.24
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.22
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.21
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.21
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.2
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.2
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.18
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.18
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.17
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.16
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.16
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.14
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.14
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.12
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.1
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.1
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.1
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.09
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.09
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.07
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.07
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.07
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.06
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.06
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.03
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	97.02
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.99
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.98
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.98
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.97
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.96
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.96
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.95
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.95
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.95
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.94
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.94
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.94
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.93
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.93
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.9
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.9
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.9
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.88
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.88
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.88
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.88
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.87
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.87
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.85
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.85
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.85
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.84
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.83
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.82
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.81
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.81
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.8
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.8
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.79
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.78
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.76
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.76
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.75
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.75
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.73
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.72
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.71
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.69
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.68
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.67
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.66
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.65
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.65
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.64
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.63
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.63
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.63
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.62
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.61
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.6
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.6
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.59
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.57
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.57
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.56
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.56
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.56
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.56
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.56
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.55
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.55
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.55
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.54
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.54
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.53
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.51
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.51
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.49
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.49
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.47
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.46
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.46
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.46
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.45
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.45
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.45
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.44
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.43
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.42
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.41
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.41
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.41
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.4
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.39
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.38
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.38
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.38
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	96.36
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.36
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.35
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.35
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.29
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.28
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.27
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.27
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.26
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.26
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.25
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.25
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.24
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.24
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.23
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.23
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.23
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.21
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.21
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.21
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.18
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.18
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.17
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.16
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.15
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.11
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	96.08
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.08
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.08
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.08
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.06
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.05
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.05
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.05
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.04
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.02
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.02
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	96.01
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.0
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.99
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.99
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.98
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.98
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.95
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.95
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.95
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.95
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.93
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.92
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.91
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.9
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.9
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	95.89
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.89
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	95.83
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.83
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.83
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.82
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.82
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.82
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.82
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.82
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.82
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.8
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.8
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.8
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.79
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.79
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	95.77
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.76
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.75
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	95.74
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.74
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.74
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	95.73
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.73
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.72
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	95.71
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.71
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.7
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	95.7
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	95.69
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	95.68
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.68
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.68
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.67
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	95.65
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.65
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.63
2o07_A	304	Spermidine synthase; structural genomics, structur	95.62
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.61
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.61
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.6
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.59

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=9.4e-55  Score=395.03  Aligned_cols=321  Identities=22%  Similarity=0.283  Sum_probs=279.8

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ||.+|||+++.++  |+|  +.++++  ++|.|.| ++ +||+|||.++|||++|++.+.|.+.....+|.++|||+  +
T Consensus        25 ~p~~MkA~~~~~~--g~~--~~l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~--~   94 (353)
T 4dup_A           25 LPQEMRFVDLKSF--GGP--DVMVIG--KRPLPVA-GE-GEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLEL--S   94 (353)
T ss_dssp             CCSSEEEEEESSS--SSG--GGEEEE--EECCCCC-CT-TEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEE--E
T ss_pred             CChheeEEEEccC--CCc--cceEEE--eccCCCC-CC-CEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccccc--E
Confidence            6788999999998  777  345555  4677766 77 99999999999999999998886654455689999994  5


Q ss_pred             eEEEEecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYV  161 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~v  161 (347)
                      |+|+++|+++++|++||+|+++   |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++|
T Consensus        95 G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~V  171 (353)
T 4dup_A           95 GEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQ-ILPF-PKGYDAV-KAAALPETFFTVWANLFQMAGLTEGESV  171 (353)
T ss_dssp             EEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTCCHH-HHHTSHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             EEEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHH-cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEE
Confidence            5999999999999999999986   8999999999999 9999 9995554 5888999999999999888999999999


Q ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHH
Q 019042          162 YVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD  241 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~  241 (347)
                      ||+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.+.+.+++++|++|||+|++.+.
T Consensus       172 lV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~~~~  249 (353)
T 4dup_A          172 LIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFE  249 (353)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHSSCEEEEEESCCGGGHH
T ss_pred             EEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEeCCch-HHHHHHHHHhCCCceEEEECCCHHHHH
Confidence            99998999999999999999999999999999999999 9999999999887 899999988844899999999999999


Q ss_pred             HHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccccc-----chHHHHHHHHHHHHcCCcccccc
Q 019042          242 AVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYH-----QYPKFLELVMPAIKEGKLVYVED  316 (347)
Q Consensus       242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~  316 (347)
                      .++++++++|+++.+|...+.    .....+...++.+++++.|+....+..     ...+.++++++++++|++++.++
T Consensus       250 ~~~~~l~~~G~iv~~g~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~  325 (353)
T 4dup_A          250 RNIASLAKDGCLSIIAFLGGA----VAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIH  325 (353)
T ss_dssp             HHHHTEEEEEEEEECCCTTCS----EEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEE
T ss_pred             HHHHHhccCCEEEEEEecCCC----cccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcc
Confidence            999999999999999975432    111256677888999999988765421     12234788999999999999999


Q ss_pred             eeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          317 IAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       317 ~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++|+++++++|++.+.+++..||+||++
T Consensus       326 ~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          326 KVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             EEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             eEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999999999999999999975

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.2e-54  Score=391.90  Aligned_cols=324  Identities=19%  Similarity=0.219  Sum_probs=279.1

Q ss_pred             CccccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCc
Q 019042            1 MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEP   80 (347)
Q Consensus         1 ~~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e   80 (347)
                      |...+|.+|||+++.++  |.|  +.++++  ++|.|.| ++ +||+|||+++|||++|++...|.+.  ..+|+++|||
T Consensus         1 M~~~~p~~mka~~~~~~--g~~--~~l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~~--~~~P~i~G~e   70 (334)
T 3qwb_A            1 MKCTIPEQQKVILIDEI--GGY--DVIKYE--DYPVPSI-SE-EELLIKNKYTGVNYIESYFRKGIYP--CEKPYVLGRE   70 (334)
T ss_dssp             ----CCSEEEEEEESSS--SSG--GGEEEE--EEECCCC-CT-TEEEEEEEEEECCTTHHHHHHTSSC--CCSSEECCSE
T ss_pred             CCCCCchheEEEEEecC--CCC--ceeEEE--eccCCCC-CC-CEEEEEEEEEecCHHHHHHHCCCCC--CCCCCccccc
Confidence            66668899999999998  776  345554  4667766 77 9999999999999999988887543  3568999999


Q ss_pred             eeeceEEEEecCCCCCCCCCCEEEec--cCcceeEeec-CCCcceeccCCCCCcccc---ccccCCchhhHHHHhhhhcC
Q 019042           81 LSGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEYSLIQ-SPQHLIKILDTNVPLSYY---TGILGMPGLTAYGGLYELCS  154 (347)
Q Consensus        81 ~~g~G~v~~vG~~v~~~~vGd~V~~~--g~~~~~~~~~-~~~~~~~i~P~~~~~~~~---aa~l~~~~~tA~~~l~~~~~  154 (347)
                      +  +|+|+++|+++++|++||+|+++  |+|+||++++ ++. ++++ |++++.. +   +|++++.++|||+++.+..+
T Consensus        71 ~--~G~V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~-~~~~-P~~~~~~-~~~~aa~~~~~~~ta~~~l~~~~~  145 (334)
T 3qwb_A           71 A--SGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGP-VMKL-PKGTSDE-ELKLYAAGLLQVLTALSFTNEAYH  145 (334)
T ss_dssp             E--EEEEEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSS-EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             e--EEEEEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcce-EEEC-CCCCCHH-HhhhhhhhhhHHHHHHHHHHHhcc
Confidence            5  45999999999999999999975  8999999999 888 9999 9996554 5   67889999999999988789


Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFE  233 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid  233 (347)
                      +++|++|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++. ++.+.+.+.+++ ++|++||
T Consensus       146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~D~vid  223 (334)
T 3qwb_A          146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFD  223 (334)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCceEEEE
Confidence            999999999999999999999999999999999999999999999 9999999999887 899999999877 8999999


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc---ccchHHHHHHHHHHHHcCC
Q 019042          234 NVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF---YHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       234 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~  310 (347)
                      |+|...+..++++++++|+++.+|...+.     ....+...++.+++++.++....+   +..+.+.++++++++++|+
T Consensus       224 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  298 (334)
T 3qwb_A          224 SVGKDTFEISLAALKRKGVFVSFGNASGL-----IPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKK  298 (334)
T ss_dssp             CCGGGGHHHHHHHEEEEEEEEECCCTTCC-----CCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTS
T ss_pred             CCChHHHHHHHHHhccCCEEEEEcCCCCC-----CCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCC
Confidence            99999999999999999999999975432     223455566778999988765544   3344566789999999999


Q ss_pred             cccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          311 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       311 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      +++.++++|+++++++||+.+.+++..||+|+++++
T Consensus       299 l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          299 LNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             SCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             ccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            999999999999999999999999999999999863

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.8e-54  Score=390.28  Aligned_cols=318  Identities=17%  Similarity=0.178  Sum_probs=271.6

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            4 EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         4 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      .+|.+|||+++.++  ++|+  .++++  ++|.|+| ++ +||+|||+++|||++|++...|.+.....+|.++|||++ 
T Consensus        17 ~~p~~MkA~~~~~~--g~~~--~l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~-   87 (342)
T 4eye_A           17 QGPGSMKAIQAQSL--SGPE--GLVYT--DVETPGA-GP-NVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETA-   87 (342)
T ss_dssp             -CCCEEEEEEECSS--SGGG--GEEEE--EEECCCC-CT-TCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEE-
T ss_pred             cCCcceEEEEEecC--CCCc--eeEEE--eCCCCCC-CC-CEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEE-
Confidence            46789999999998  7773  45555  4666766 77 999999999999999999888865444567999999955 


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                       |+|+++|++++ |++||+|+++   |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++
T Consensus        88 -G~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~  162 (342)
T 4eye_A           88 -GVVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSN-ILPT-PPQLDDA-EAVALIANYHTMYFAYARRGQLRAGET  162 (342)
T ss_dssp             -EEEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGG-EEEC-CTTSCHH-HHHHHTTHHHHHHHHHHTTSCCCTTCE
T ss_pred             -EEEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHH-eEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCE
Confidence             59999999999 9999999986   7999999999999 9999 9995554 588999999999999988899999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchh
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKM  239 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~  239 (347)
                      |||+|++|++|++++|+|++.|++|+++++++++++.++ ++|++.++|++ . ++.+.+++.+++ ++|++|||+|++.
T Consensus       163 VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvvid~~g~~~  239 (342)
T 4eye_A          163 VLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLE-E-GWAKAVREATGGAGVDMVVDPIGGPA  239 (342)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEESS-T-THHHHHHHHTTTSCEEEEEESCC--C
T ss_pred             EEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEecCc-h-hHHHHHHHHhCCCCceEEEECCchhH
Confidence            999999999999999999999999999999999999999 99999999998 5 899999999987 9999999999999


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc----ccchHHHHHHHHHHHHcCCccccc
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF----YHQYPKFLELVMPAIKEGKLVYVE  315 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~  315 (347)
                      +..++++++++|+++.+|...+.     ....+...++.+++++.|+....+    ++...+.++++.+++++| +++.+
T Consensus       240 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i  313 (342)
T 4eye_A          240 FDDAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPV  313 (342)
T ss_dssp             HHHHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCE
T ss_pred             HHHHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCc
Confidence            99999999999999999875432     122344456778999999876543    444567899999999999 99999


Q ss_pred             ceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          316 DIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       316 ~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +++|+++++++||+.+.+++..||+||++
T Consensus       314 ~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          314 SARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             EEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999999999999999999873

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=3.4e-54  Score=392.79  Aligned_cols=313  Identities=21%  Similarity=0.257  Sum_probs=274.6

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            4 EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         4 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      .|+.+|||++++++   +|  +.+++++  +|.|.| ++ +||||||+++|||++|++.+.|.+.....+|.++|||+  
T Consensus        23 ~m~~~mkA~~~~~~---~~--~~l~~~e--~p~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~--   91 (363)
T 3uog_A           23 MMSKWMQEWSTETV---AP--HDLKLAE--RPVPEA-GE-HDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDM--   91 (363)
T ss_dssp             CCCSEEEEEEBSCT---TT--TCCEEEE--EECCCC-CT-TEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEE--
T ss_pred             cCchhhEEEEEccC---CC--CCcEEEe--eeCCCC-CC-CEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccce--
Confidence            35667999999876   33  3466665  566656 77 99999999999999999988876544456799999995  


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec---------------------------cCcceeEeecCCCcceeccCCCCCcccccc
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL---------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~---------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa  136 (347)
                      +|+|+++|+++++|++||+|++.                           |+|+||++++++. ++++ |++++.. ++|
T Consensus        92 ~G~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa  168 (363)
T 3uog_A           92 SGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGW-FVAA-PKSLDAA-EAS  168 (363)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGG-EEEC-CTTSCHH-HHH
T ss_pred             EEEEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHH-eEEC-CCCCCHH-HHh
Confidence            55999999999999999999975                           8899999999999 9999 9995554 688


Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      +++++++|||+++.+.+++++|++|||+| +|++|++++|+|+..|++|++++++++++++++ ++|+++++|.+.. ++
T Consensus       169 ~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~  245 (363)
T 3uog_A          169 TLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGADHGINRLEE-DW  245 (363)
T ss_dssp             TTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CH
T ss_pred             hcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcCCCEEEcCCcc-cH
Confidence            89999999999998789999999999999 699999999999999999999999999999999 9999999996545 89


Q ss_pred             HHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccch
Q 019042          217 DAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY  295 (347)
Q Consensus       217 ~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  295 (347)
                      .+.+++++++ ++|++|||+|.+.+..++++++++|+++.+|.....     ....+...++.+++++.|+....     
T Consensus       246 ~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----  315 (363)
T 3uog_A          246 VERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGF-----EVSGPVGPLLLKSPVVQGISVGH-----  315 (363)
T ss_dssp             HHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSC-----EECCBTTHHHHTCCEEEECCCCC-----
T ss_pred             HHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCc-----ccCcCHHHHHhCCcEEEEEecCC-----
Confidence            9999999987 999999999988999999999999999999986432     12345667788999999987665     


Q ss_pred             HHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          296 PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       296 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .+.++++++++++|++++.++++|+++++++||+.+.+++ .||+||+|
T Consensus       316 ~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          316 RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            6889999999999999999999999999999999999998 89999986

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.2e-53  Score=386.03  Aligned_cols=321  Identities=14%  Similarity=0.207  Sum_probs=270.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      |+|+|||+++.++  |.|. +.  ++..++|.|.| ++ +||+|||+++|||++|++.+.|.+.....+|.++|||+  +
T Consensus         1 M~~~mka~~~~~~--g~p~-~~--l~~~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~--~   71 (340)
T 3gms_A            1 MSLHGKLIQFHKF--GNPK-DV--LQVEYKNIEPL-KD-NEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEG--V   71 (340)
T ss_dssp             -CCEEEEEEESSC--SCHH-HH--EEEEEEECCCC-CT-TEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCC--E
T ss_pred             CCcccEEEEEecC--CCch-he--EEEEecCCCCC-CC-CEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcce--E
Confidence            5678999999998  7762 22  44445677766 77 99999999999999999999886654457799999995  4


Q ss_pred             eEEEEecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYV  161 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~v  161 (347)
                      |+|+++|++++++++||+|+++   |+|+||++++++. ++++ |++++.. ++|++++.++|||+++.+.+++++|++|
T Consensus        72 G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~v-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~V  148 (340)
T 3gms_A           72 GIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADF-VVPI-PDSIDDF-TAAQMYINPLTAWVTCTETLNLQRNDVL  148 (340)
T ss_dssp             EEEEEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTSSHHHHHHHHHHHTTSCCCTTCEE
T ss_pred             EEEEEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHH-eEEC-CCCCCHH-HHhhhcchHHHHHHHHHHhcccCCCCEE
Confidence            5999999999999999999976   8999999999999 9999 9995554 6888999999999999888999999999


Q ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhH
Q 019042          162 YVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKML  240 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~  240 (347)
                      ||+|++|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++. ++.+.+.+.+++ ++|++|||+|+...
T Consensus       149 lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~  226 (340)
T 3gms_A          149 LVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDG  226 (340)
T ss_dssp             EESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCHHHH
T ss_pred             EEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEEEECCCChhH
Confidence            99999889999999999999999999999999999999 8999999999887 899999999987 99999999999877


Q ss_pred             HHHHHhhccCCEEEEEcccccccCCCCccccchHHHH-hccceeeeeEeccc-----ccchHHHHHHHHHHHHcCCccc-
Q 019042          241 DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV-GKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKEGKLVY-  313 (347)
Q Consensus       241 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~-  313 (347)
                      ..++++++++|+++.+|...+.       ..+...+. ..++++..+....+     +....+.++++++++++|++++ 
T Consensus       227 ~~~~~~l~~~G~iv~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  299 (340)
T 3gms_A          227 NELAFSLRPNGHFLTIGLLSGI-------QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFM  299 (340)
T ss_dssp             HHHHHTEEEEEEEEECCCTTSC-------CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHhcCCCEEEEEeecCCC-------CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccc
Confidence            7888999999999999985432       11222222 23455444433222     2334678999999999999997 


Q ss_pred             ccceeeccccHHHHHHHhHcCCC-cceEEEEeCC
Q 019042          314 VEDIAEGLEKAPSALVGIFTGQN-VGKQLVVVAP  346 (347)
Q Consensus       314 ~~~~~~~~~~~~~a~~~~~~~~~-~gkivi~~~~  346 (347)
                      .++++|+++++++||+.+.+++. .||+++++.+
T Consensus       300 ~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          300 KVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             CEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             cccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            58889999999999999999885 5999999865

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=3e-52  Score=376.58  Aligned_cols=325  Identities=40%  Similarity=0.672  Sum_probs=277.9

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee--c
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG--Y   84 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g--~   84 (347)
                      ++||||++++.+.|.|+++.+++++  +|.|+| ++ +||||||++++||++|++.+.+..  .+.+|.++|||+++  +
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~d~~~~~~~~--~~~~p~~~G~e~g~~~~   79 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVE--TPLGEP-AE-GQILVKNEYLSLDPAMRGWMNDAR--SYIPPVGIGEVMRALGV   79 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEE--EECCCC-CT-TCEEEEEEEEECCTHHHHHHSCSC--CSSCCCCTTSBCCCEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEe--ccCCCC-CC-CEEEEEEEEEEeCHHHHhhhhccc--ccCCCCCCCcccCCceE
Confidence            5689999998656766667777776  556656 77 999999999999999988776532  34568889998653  4


Q ss_pred             eEEEEecCCCCCCCCCCEEEeccCcceeEeecCCCcceeccCCCCCccccc--cccCCchhhHHHHhhhhcCCCCCCEEE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPLSYYT--GILGMPGLTAYGGLYELCSPKKGEYVY  162 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~~~~~~~a--a~l~~~~~tA~~~l~~~~~~~~~~~vl  162 (347)
                      |+|++  +++++|++||||++.|+|+||++++++. ++++ |++++.. ++  |+++++++|||+++.+.+++++|++||
T Consensus        80 G~V~~--~~v~~~~vGdrV~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~~a~a~l~~~~~tA~~al~~~~~~~~g~~vl  154 (336)
T 4b7c_A           80 GKVLV--SKHPGFQAGDYVNGALGVQDYFIGEPKG-FYKV-DPSRAPL-PRYLSALGMTGMTAYFALLDVGQPKNGETVV  154 (336)
T ss_dssp             EEEEE--ECSTTCCTTCEEEEECCSBSEEEECCTT-CEEE-CTTTSCG-GGGGTTTSHHHHHHHHHHHHTTCCCTTCEEE
T ss_pred             EEEEe--cCCCCCCCCCEEeccCCceEEEEechHH-eEEc-CCCCCch-HHHhhhcccHHHHHHHHHHHhcCCCCCCEEE
Confidence            57766  5689999999999999999999999999 9999 9985332 33  889999999999998889999999999


Q ss_pred             EEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHH
Q 019042          163 VSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLL-KNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD  241 (347)
Q Consensus       163 I~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~  241 (347)
                      |+|++|++|++++|+++..|++|+++++++++++.+ + ++|+++++|+++. ++.+.+.+.+++++|++|||+|++.+.
T Consensus       155 I~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~  232 (336)
T 4b7c_A          155 ISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE-ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILD  232 (336)
T ss_dssp             ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESSCHHHHH
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHhcCCCceEEEECCCcchHH
Confidence            999999999999999999999999999999999999 6 9999999999887 899999998866899999999999999


Q ss_pred             HHHHhhccCCEEEEEcccccccCC-CCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeec
Q 019042          242 AVLLNMRIHGRIAVCGMISQYNLE-KPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEG  320 (347)
Q Consensus       242 ~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  320 (347)
                      .++++++++|+++.+|........ ......+...++.+++++.|+....+....++.++++++++++|++++.+..+++
T Consensus       233 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  312 (336)
T 4b7c_A          233 TVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEG  312 (336)
T ss_dssp             HHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEEC
T ss_pred             HHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecC
Confidence            999999999999999986532110 0112345667788999999998776655567899999999999999999888899


Q ss_pred             cccHHHHHHHhHcCCCcceEEEEe
Q 019042          321 LEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       321 ~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++++++||+.+.+++..||+||++
T Consensus       313 l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          313 LETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999999999999999999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=9.7e-53  Score=380.91  Aligned_cols=314  Identities=19%  Similarity=0.195  Sum_probs=266.6

Q ss_pred             cccceEEEeeccCC---CCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            7 VSNKQVILSNYVTG---FPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         7 ~~~~a~~~~~~~~~---~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      |+|||++++++  |   .|  +.+++++  +|.|.| ++ +||+|||.+++||++|++...+.   ...+|.++|||+  
T Consensus         1 m~MkA~~~~~~--G~~~~~--~~l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~--   67 (346)
T 3fbg_A            1 MSLKAIGFEQP--FKLSDG--NLFKTFN--LDIPEP-KV-HEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDA--   67 (346)
T ss_dssp             -CEEEEEBSSC--CCGGGC--CCCEEEE--ECCCCC-CT-TEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCE--
T ss_pred             CCcEEEEEEec--cccCCC--ceeEecc--ccCCCC-CC-CEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCcc--
Confidence            67999999998  6   44  4555555  666666 77 99999999999999999888774   346799999995  


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCC-
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPK-  156 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~-  156 (347)
                      +|+|+++|+++++|++||+|++.      |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+..+++ 
T Consensus        68 ~G~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~  144 (346)
T 3fbg_A           68 IGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERL-VAKA-PKNISAE-QAVSLPLTGITAYETLFDVFGISR  144 (346)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGG-EEEC-CSSSCHH-HHTTSHHHHHHHHHHHHTTSCCCS
T ss_pred             EEEEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHH-eEEC-CCCCCHH-HhhhcchhHHHHHHHHHHhcCCcc
Confidence            45999999999999999999984      7999999999999 9999 9995554 68889999999999998888998 


Q ss_pred             -----CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          157 -----KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       157 -----~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                           +|++|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++  ++.+.+++..++++|++
T Consensus       145 ~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~Dvv  221 (346)
T 3fbg_A          145 NRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYV  221 (346)
T ss_dssp             SHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCEEEE
T ss_pred             ccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCccEE
Confidence                 9999999988999999999999999999999999999999999 899999999875  78888888844489999


Q ss_pred             EECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-------ccchHHHHHHHH
Q 019042          232 FENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-------YHQYPKFLELVM  303 (347)
Q Consensus       232 id~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~  303 (347)
                      |||+|+. .+..++++++++|+++.++...        ...+...+..+++++.++.....       .....+.+++++
T Consensus       222 ~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (346)
T 3fbg_A          222 FCTFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDIT  293 (346)
T ss_dssp             EESSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHH
T ss_pred             EECCCchHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHH
Confidence            9999984 6799999999999999887522        12344556678888888654321       223357899999


Q ss_pred             HHHHcCCcccccceee---ccccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          304 PAIKEGKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       304 ~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      +++++|++++.++++|   +++++++||+.+.+++..||+|++++++
T Consensus       294 ~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~  340 (346)
T 3fbg_A          294 NKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEG  340 (346)
T ss_dssp             HHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC---
T ss_pred             HHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCc
Confidence            9999999999998887   8999999999999999999999998753

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=8.5e-53  Score=378.21  Aligned_cols=315  Identities=20%  Similarity=0.246  Sum_probs=272.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  |+|  +.+++++  +|.|.| ++ +||+|||+++|||++|++...|.+.. ..+|.++|||+  +|+|+
T Consensus         2 MkA~~~~~~--g~~--~~l~~~~--~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~--~G~V~   70 (325)
T 3jyn_A            2 AKRIQFSTV--GGP--EVLEYVD--FEPEAP-GP-QAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEG--AGVVE   70 (325)
T ss_dssp             EEEEEBSSC--SSG--GGCEEEE--ECCCCC-CT-TEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCE--EEEEE
T ss_pred             cEEEEEecC--CCc--ceeEEee--cCCCCC-CC-CEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCcee--EEEEE
Confidence            699999998  887  4455554  666666 77 99999999999999999988875532 35689999994  55999


Q ss_pred             EecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042           89 VLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                      ++|+++++|++||+|++.    |+|+||++++++. ++++ |++++.. ++|+++..++|||+++.+.+++++|++|||+
T Consensus        71 ~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~  147 (325)
T 3jyn_A           71 AVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEAN-LVKL-ADSVSFE-QAAALMLKGLTVQYLLRQTYQVKPGEIILFH  147 (325)
T ss_dssp             EECTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEES
T ss_pred             EECCCCCCCCCCCEEEEecCCCccccceEEecHHH-eEEC-CCCCCHH-HHhhhhhhHHHHHHHHHHhcCCCCCCEEEEE
Confidence            999999999999999874    7999999999999 9999 9995554 6888999999999999888899999999999


Q ss_pred             cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHH
Q 019042          165 AASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAV  243 (347)
Q Consensus       165 ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~  243 (347)
                      |++|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++. ++.+.+.+.+++ ++|++|||+|++.+..+
T Consensus       148 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~  225 (325)
T 3jyn_A          148 AAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTS  225 (325)
T ss_dssp             STTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESSCGGGHHHH
T ss_pred             cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECCChHHHHHH
Confidence            99999999999999999999999999999999999 9999999999887 899999999987 89999999999999999


Q ss_pred             HHhhccCCEEEEEcccccccCCCCccccchHHHHhc-cceeeeeEeccc---ccchHHHHHHHHHHHHcCCcccccceee
Q 019042          244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGK-RIRMEGFLAGDF---YHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       244 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      +++++++|+++.+|...+.     ....+...+..+ ++++.+.....+   +..+.+.++++++++++|++++.++++|
T Consensus       226 ~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  300 (325)
T 3jyn_A          226 LDSVAPRGLVVSFGNASGP-----VSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQY  300 (325)
T ss_dssp             HTTEEEEEEEEECCCTTCC-----CCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEE
T ss_pred             HHHhcCCCEEEEEecCCCC-----CCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEE
Confidence            9999999999999976432     123455555555 566655443332   4556677889999999999999999999


Q ss_pred             ccccHHHHHHHhHcCCCcceEEEEe
Q 019042          320 GLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       320 ~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +++++++||+.+.+++..||+||.+
T Consensus       301 ~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          301 ALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             EGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             cHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999999999999999999999863

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=4.4e-52  Score=381.01  Aligned_cols=319  Identities=18%  Similarity=0.223  Sum_probs=270.8

Q ss_pred             CccccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCc
Q 019042            1 MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEP   80 (347)
Q Consensus         1 ~~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e   80 (347)
                      |+..||++|||+++.++  +.|    +++++  +|.|.| ++ +||||||+++|||++|++.+.|... ...+|.++|||
T Consensus         1 ~~~~~~~tmkA~v~~~~--~~~----l~~~~--~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE   69 (378)
T 3uko_A            1 ATQGQVITCKAAVAYEP--NKP----LVIED--VQVAPP-QA-GEVRIKILYTALCHTDAYTWSGKDP-EGLFPCILGHE   69 (378)
T ss_dssp             CCTTSCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCE
T ss_pred             CCcccceeeEEEEEecC--CCc----cEEEE--ecCCCC-CC-CeEEEEEEEeecCHHHHHHhcCCCC-CCCCCccCCcc
Confidence            45678999999999888  665    56655  566655 77 9999999999999999999887642 34679999999


Q ss_pred             eeeceEEEEecCCCCCCCCCCEEEec----------------------------------------------------cC
Q 019042           81 LSGYGVSKVLDSTHPNYKKDDLVWGL----------------------------------------------------TS  108 (347)
Q Consensus        81 ~~g~G~v~~vG~~v~~~~vGd~V~~~----------------------------------------------------g~  108 (347)
                      +  +|+|+++|++|++|++||||++.                                                    |+
T Consensus        70 ~--~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~  147 (378)
T 3uko_A           70 A--AGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTST  147 (378)
T ss_dssp             E--EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCC
T ss_pred             c--eEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcc
Confidence            5  55999999999999999999842                                                    48


Q ss_pred             cceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEE
Q 019042          109 WEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVG  187 (347)
Q Consensus       109 ~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~  187 (347)
                      |+||++++++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|++
T Consensus       148 ~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~  223 (378)
T 3uko_A          148 FSQYTVVHDVS-VAKI-DPTAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIG  223 (378)
T ss_dssp             SBSEEEEEGGG-EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEE
T ss_pred             eEeEEEechhh-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE
Confidence            99999999999 9999 9996554 688899999999999988899999999999997 9999999999999999 8999


Q ss_pred             EeCCHHHHHHHHHHhCCCeeEecC--ChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEccccccc
Q 019042          188 SAGSKEKVNLLKNKFGFDDAFNYK--KEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYN  263 (347)
Q Consensus       188 ~~~~~~~~~~~~~~~g~~~vi~~~--~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  263 (347)
                      ++++++|+++++ ++|+++++|++  +. ++.+.+++++++++|++|||+|+ ..+..++++++++ |+++.+|..... 
T Consensus       224 ~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~-  300 (378)
T 3uko_A          224 IDIDSKKYETAK-KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-  300 (378)
T ss_dssp             ECSCTTHHHHHH-TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT-
T ss_pred             EcCCHHHHHHHH-HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCC-
Confidence            999999999999 99999999987  44 89999999998899999999998 6899999999996 999999975421 


Q ss_pred             CCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEE
Q 019042          264 LEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQL  341 (347)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkiv  341 (347)
                         .....+...++ +++++.|+....+.  ..+.++++++++++|+++  +.++++|+|+++++||+.+.+++.. |+|
T Consensus       301 ---~~~~~~~~~~~-~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvv  373 (378)
T 3uko_A          301 ---QEISTRPFQLV-TGRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCV  373 (378)
T ss_dssp             ---CCEEECTHHHH-TTCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEE
T ss_pred             ---CccccCHHHHh-cCcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEE
Confidence               11223344444 38888888665432  257899999999999987  4588999999999999999888765 999


Q ss_pred             EEeCC
Q 019042          342 VVVAP  346 (347)
Q Consensus       342 i~~~~  346 (347)
                      |++++
T Consensus       374 i~~~~  378 (378)
T 3uko_A          374 LDTSK  378 (378)
T ss_dssp             EETTC
T ss_pred             EecCC
Confidence            99864

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=8.8e-53  Score=381.63  Aligned_cols=324  Identities=21%  Similarity=0.241  Sum_probs=263.5

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      +|+|||++++++  |.|+  .++++  +.|.|.| ++ +||+|||.+++||++|++.+.|.+.....+|.++|||+  +|
T Consensus         1 sm~mka~~~~~~--g~~~--~l~~~--~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~--~G   70 (349)
T 4a27_A            1 SMEMRAVVLAGF--GGLN--KLRLF--RKAMPEP-QD-GELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFEC--SG   70 (349)
T ss_dssp             CCCEEEEEECSS--SSGG--GEEEE--EECCCCC-CT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEE--EE
T ss_pred             CceeEEEEEccC--CCcc--eeEEE--ecCCCCC-CC-CEEEEEEEEEecCHHHHHHhCCCcCCCCCCCcccccee--EE
Confidence            378999999998  7773  35554  4667766 77 99999999999999999998886654557799999995  45


Q ss_pred             EEEEecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEE
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVY  162 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vl  162 (347)
                      +|+++|+++++|++||+|+++   |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++|+
T Consensus        71 ~V~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl  147 (349)
T 4a27_A           71 IVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEF-VYKI-PDDMSFS-EAAAFPMNFVTAYVMLFEVANLREGMSVL  147 (349)
T ss_dssp             EEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             EEEEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHH-eEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence            999999999999999999986   7999999999999 9999 9995554 68889999999999998889999999999


Q ss_pred             EEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHH
Q 019042          163 VSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD  241 (347)
Q Consensus       163 I~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~  241 (347)
                      |+|++|++|++++|+|+..| ++|++++ ++++.+.++  +|+++++| .+. ++.+.+++++++++|++|||+|++.+.
T Consensus       148 V~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~~  222 (349)
T 4a27_A          148 VHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLDCLCGDNTG  222 (349)
T ss_dssp             ESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEEECC-----
T ss_pred             EEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEECCCchhHH
Confidence            99999999999999999995 5899988 556667664  89999999 555 899999999877999999999998789


Q ss_pred             HHHHhhccCCEEEEEcccccccCCC-----------CccccchHHHHhccceeeeeEeccc------ccchHHHHHHHHH
Q 019042          242 AVLLNMRIHGRIAVCGMISQYNLEK-----------PEGVHNLMQVVGKRIRMEGFLAGDF------YHQYPKFLELVMP  304 (347)
Q Consensus       242 ~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~  304 (347)
                      .++++++++|+++.+|.........           .....+...++.+++++.++....+      ....++.++++++
T Consensus       223 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  302 (349)
T 4a27_A          223 KGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIG  302 (349)
T ss_dssp             --CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHH
Confidence            9999999999999999753211000           0112455667778899998876443      1234788999999


Q ss_pred             HHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       305 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      ++++|++++.++++|+++++++|++.+.+++..||+||+++++
T Consensus       303 l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          303 LYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             HHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            9999999999999999999999999999999999999999763

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2.8e-52  Score=377.34  Aligned_cols=313  Identities=16%  Similarity=0.246  Sum_probs=266.8

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC-CcccCCCCCCceee
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP-SFVASFNPGEPLSG   83 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~-~~~~p~v~G~e~~g   83 (347)
                      +|.+|||+++.++  +.|    ++++  ++|.|.| ++ +||||||.+++||++|++.+.+.... ...+|.++|||+  
T Consensus         4 ~~~~mka~~~~~~--~~~----l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~--   71 (343)
T 3gaz_A            4 TTPTMIAAVVEEA--NGP----FVLR--KLARPQP-AP-GQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDL--   71 (343)
T ss_dssp             --CEEEEEEECST--TCC----EEEE--EEECCCC-CT-TEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEE--
T ss_pred             CchhheEEEEecC--CCc----eEEE--eccCCCC-CC-CEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcce--
Confidence            4678999999888  665    4555  4666766 77 99999999999999999988875422 245789999994  


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec--------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCC
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL--------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSP  155 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~--------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~  155 (347)
                      +|+|+++|+++++|++||+|+++        |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++
T Consensus        72 ~G~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~  148 (343)
T 3gaz_A           72 AGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARL-LASK-PAALTMR-QASVLPLVFITAWEGLVDRAQV  148 (343)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHTTTTCC
T ss_pred             EEEEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHH-eeeC-CCCCCHH-HHHHhhhhHHHHHHHHHHhcCC
Confidence            55999999999999999999875        7899999999999 9999 9995554 6888999999999999788999


Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~  234 (347)
                      ++|++|||+||+|++|++++|+|+..|++|+++ .++++++.++ ++|++. +| ++. ++.+.+.+.+++ ++|++|||
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~-~lGa~~-i~-~~~-~~~~~~~~~~~~~g~D~vid~  223 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR-DLGATP-ID-ASR-EPEDYAAEHTAGQGFDLVYDT  223 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH-HHTSEE-EE-TTS-CHHHHHHHHHTTSCEEEEEES
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH-HcCCCE-ec-cCC-CHHHHHHHHhcCCCceEEEEC
Confidence            999999999999999999999999999999999 7889999998 999988 77 554 888899988887 89999999


Q ss_pred             CCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc------ccchHHHHHHHHHHHHc
Q 019042          235 VGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF------YHQYPKFLELVMPAIKE  308 (347)
Q Consensus       235 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~  308 (347)
                      +|++.+..++++++++|+++.+|...         ..+...+..+++++.++.....      +....+.++++++++++
T Consensus       224 ~g~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  294 (343)
T 3gaz_A          224 LGGPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQT  294 (343)
T ss_dssp             SCTHHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHC
Confidence            99999999999999999999998743         2345667778999988754321      22345789999999999


Q ss_pred             CCcccccc-eeeccccHHHHHHHhHcCCC----cceEEEEeCC
Q 019042          309 GKLVYVED-IAEGLEKAPSALVGIFTGQN----VGKQLVVVAP  346 (347)
Q Consensus       309 g~~~~~~~-~~~~~~~~~~a~~~~~~~~~----~gkivi~~~~  346 (347)
                      |++++.++ ++|+++++++|++.+.+++.    +||+|++++-
T Consensus       295 g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          295 GKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             TCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             CCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence            99999998 79999999999999998764    6899999864

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.1e-52  Score=378.64  Aligned_cols=322  Identities=22%  Similarity=0.263  Sum_probs=270.0

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            4 EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         4 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      .+|.+|||+++.++  |.|  +.++++  ++|.|.| ++ +||+|||.++|||++|++...|.+.....+|.++|||++ 
T Consensus        18 ~~~~~Mka~~~~~~--g~~--~~l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~-   88 (354)
T 2j8z_A           18 LYFQSMLAVHFDKP--GGP--ENLYVK--EVAKPSP-GE-GEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEAS-   88 (354)
T ss_dssp             ---CEEEEEEESSC--SSG--GGEEEE--EEECCCC-CT-TEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEE-
T ss_pred             cchhheeEEEEccC--CCc--cceEEe--ecCCCCC-CC-CeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeE-
Confidence            46788999999888  766  345554  4666766 77 999999999999999998888754333346899999954 


Q ss_pred             ceEEEEecCCC-CCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCC
Q 019042           84 YGVSKVLDSTH-PNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGE  159 (347)
Q Consensus        84 ~G~v~~vG~~v-~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  159 (347)
                       |+|+++|++| ++|++||+|+++   |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|+
T Consensus        89 -G~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~ls~~-~aa~l~~~~~tA~~al~~~~~~~~g~  164 (354)
T 2j8z_A           89 -GHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGL-LMPI-PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQAGD  164 (354)
T ss_dssp             -EEEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTCCHH-HHTTSHHHHHHHHHHHTTTSCCCTTC
T ss_pred             -EEEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHH-cEEC-CCCCCHH-HHHhccchHHHHHHHHHHhcCCCCCC
Confidence             5999999999 999999999987   8999999999999 9999 9995554 58889999999999998778999999


Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCch
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGK  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~  238 (347)
                      +|+|+||+|++|++++|+++..|++|+++++++++++.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|+.
T Consensus       165 ~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~G~~  242 (354)
T 2j8z_A          165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGS  242 (354)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCGG
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-HHHHHHHHHhcCCCceEEEECCCch
Confidence            9999999999999999999999999999999999999998 9999999999886 888889888876 899999999999


Q ss_pred             hHHHHHHhhccCCEEEEEcccccccCCCCccccch-HHHHhccceeeeeEecccccch-----HHHHHHHHHHHHcC---
Q 019042          239 MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL-MQVVGKRIRMEGFLAGDFYHQY-----PKFLELVMPAIKEG---  309 (347)
Q Consensus       239 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~g---  309 (347)
                      .+..++++++++|+++.+|...+.     ....+. ..++.+++++.|+........+     .+.++++++++++|   
T Consensus       243 ~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  317 (354)
T 2j8z_A          243 YWEKNVNCLALDGRWVLYGLMGGG-----DINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQ  317 (354)
T ss_dssp             GHHHHHHHEEEEEEEEECCCTTCS-----CCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---C
T ss_pred             HHHHHHHhccCCCEEEEEeccCCC-----ccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCc
Confidence            999999999999999999975432     112445 5677899999998665432111     22345688899999   


Q ss_pred             CcccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          310 KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       310 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      ++++.++++|+++++++||+.+.+++..||+|++++
T Consensus       318 ~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          318 RLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             CCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             cccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            999999999999999999999998888899999885

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.7e-52  Score=375.24  Aligned_cols=318  Identities=24%  Similarity=0.320  Sum_probs=270.1

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      +.+|||+++.++  +.|  +.++++ .++|.|.| ++ +||+|||.++|||++|++...|.+.....+|.++|||++  |
T Consensus        27 ~~~Mka~~~~~~--g~~--~~l~~~-~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~--G   97 (351)
T 1yb5_A           27 QKLMRAVRVFEF--GGP--EVLKLR-SDIAVPIP-KD-HQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVA--G   97 (351)
T ss_dssp             -CEEEEEEESSC--SSG--GGEEEE-EEEECCCC-CT-TEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEE--E
T ss_pred             cceEEEEEEccC--CCc--ceeEEe-eecCCCCC-CC-CEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeE--E
Confidence            346899999887  766  345551 34677766 77 999999999999999998887754333457899999954  5


Q ss_pred             EEEEecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEE
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYV  161 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~v  161 (347)
                      +|+++|+++++|++||+|++.    |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++|
T Consensus        98 ~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~l~~~-~aA~l~~~~~ta~~al~~~~~~~~g~~v  174 (351)
T 1yb5_A           98 VIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEKLDFK-QGAAIGIPYFTAYRALIHSACVKAGESV  174 (351)
T ss_dssp             EEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTTHHHHHHHHHHHHTTSCCCTTCEE
T ss_pred             EEEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHH-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCCCCcCEE
Confidence            999999999999999999985    8999999999999 9999 9995554 5888999999999999877899999999


Q ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhH
Q 019042          162 YVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKML  240 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~  240 (347)
                      +|+|++|++|++++|+++..|++|+++++++++++.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|...+
T Consensus       175 lV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~G~~~~  252 (351)
T 1yb5_A          175 LVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNL  252 (351)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST-THHHHHHHHHCTTCEEEEEESCHHHHH
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEEEECCChHHH
Confidence            99999999999999999999999999999999999998 9999999999886 888888888776 89999999999888


Q ss_pred             HHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccccceee
Q 019042          241 DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVEDIAE  319 (347)
Q Consensus       241 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (347)
                      ..++++++++|+++.+|....       ...+...++.+++++.|+....+ +..+.+.++.+.+++++|++++.++++|
T Consensus       253 ~~~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~  325 (351)
T 1yb5_A          253 SKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQY  325 (351)
T ss_dssp             HHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred             HHHHHhccCCCEEEEEecCCC-------CccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceEE
Confidence            999999999999999986321       22345567788999998865432 3445667788888999999999999999


Q ss_pred             ccccHHHHHHH-hHcCCCcceEEEEe
Q 019042          320 GLEKAPSALVG-IFTGQNVGKQLVVV  344 (347)
Q Consensus       320 ~~~~~~~a~~~-~~~~~~~gkivi~~  344 (347)
                      +++++++|++. +.+++..||+|+++
T Consensus       326 ~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          326 PLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             EGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             cHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999999998 56667789999974

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=1.4e-51  Score=372.74  Aligned_cols=307  Identities=20%  Similarity=0.226  Sum_probs=266.7

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      +|||++++++  +.|    +++++  +|.|+| ++ +||+|||++++||++|++.+.|.+.....+|.++|||+  +|+|
T Consensus         2 ~MkA~~~~~~--g~~----l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~--~G~V   69 (340)
T 3s2e_A            2 MMKAAVVRAF--GAP----LTIDE--VPVPQP-GP-GQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEG--VGYV   69 (340)
T ss_dssp             EEEEEEBCST--TSC----CEEEE--EECCCC-CT-TCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEE--EEEE
T ss_pred             ceEEEEEecC--CCC----CEEEE--ccCCCC-CC-CeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcc--eEEE
Confidence            4799999887  655    45654  666666 77 99999999999999999999886544456799999995  5599


Q ss_pred             EEecCCCCCCCCCCEEE-e------------------------------ccCcceeEeecCCCcceeccCCCCCcccccc
Q 019042           88 KVLDSTHPNYKKDDLVW-G------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~-~------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa  136 (347)
                      +++|+++++|++||+|+ .                              .|+|+||++++++. ++++ |++++.. ++|
T Consensus        70 ~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa  146 (340)
T 3s2e_A           70 SAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNY-VGLL-PDKVGFV-EIA  146 (340)
T ss_dssp             EEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTTSCHH-HHG
T ss_pred             EEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHH-EEEC-CCCCCHH-Hhh
Confidence            99999999999999994 2                              28999999999999 9999 9995554 688


Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      ++++.+.|||+++ +..++++|++|||+|+ |++|++++|+|++.|++|++++++++++++++ ++|+++++|+++. ++
T Consensus       147 ~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~  222 (340)
T 3s2e_A          147 PILCAGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RLGAEVAVNARDT-DP  222 (340)
T ss_dssp             GGGTHHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CH
T ss_pred             cccchhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CH
Confidence            9999999999999 5579999999999996 99999999999999999999999999999999 9999999999887 88


Q ss_pred             HHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccch
Q 019042          217 DAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY  295 (347)
Q Consensus       217 ~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  295 (347)
                      .+.+++ +.+++|++||++|+ +.++.++++++++|+++.+|....      ....+...++.+++++.|+....     
T Consensus       223 ~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----  290 (340)
T 3s2e_A          223 AAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVLKGITIRGSIVGT-----  290 (340)
T ss_dssp             HHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHHTTCEEEECCSCC-----
T ss_pred             HHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHhCCeEEEEEecCC-----
Confidence            888887 43489999999986 689999999999999999987542      12345667788999999987665     


Q ss_pred             HHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          296 PKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       296 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      .+.++++++++++|++++.+ ..++++++++||+.+.+++..||+||++++
T Consensus       291 ~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          291 RSDLQESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHHHHHHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            68899999999999999865 467999999999999999999999999864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.5e-52  Score=374.46  Aligned_cols=308  Identities=24%  Similarity=0.235  Sum_probs=257.7

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCC----CCCcccCCCCCC
Q 019042            4 EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD----KPSFVASFNPGE   79 (347)
Q Consensus         4 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~----~~~~~~p~v~G~   79 (347)
                      +.|++|||+++.++  |.|  +.++++  ++|.|.| ++ +||+|||.++|||++|++.+.|..    .....+|.++||
T Consensus         2 ~~m~~Mka~~~~~~--g~~--~~l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~   73 (321)
T 3tqh_A            2 NAMKEMKAIQFDQF--GPP--KVLKLV--DTPTPEY-RK-NQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGY   73 (321)
T ss_dssp             ---CEEEEEEESSS--CSG--GGEEEE--EEECCCC-CT-TCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCC
T ss_pred             CccccceEEEEccC--CCc--ceeEEE--ecCCCCC-CC-CEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccc
Confidence            45779999999998  777  345554  4666766 77 999999999999999998887721    012456899999


Q ss_pred             ceeeceEEEEecCCCCCCCCCCEEEec-------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhh
Q 019042           80 PLSGYGVSKVLDSTHPNYKKDDLVWGL-------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYEL  152 (347)
Q Consensus        80 e~~g~G~v~~vG~~v~~~~vGd~V~~~-------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~  152 (347)
                      |+  +|+|+++|+++++|++||+|+++       |+|+||++++++. ++++ |++++.. ++|+++++++|||+++ +.
T Consensus        74 E~--~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~  147 (321)
T 3tqh_A           74 DF--SGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDT-IIQK-LEKLSFL-QAASLPTAGLTALQAL-NQ  147 (321)
T ss_dssp             EE--EEEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGG-EEEC-CTTSCHH-HHHHSHHHHHHHHHHH-HH
T ss_pred             ee--EEEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHH-hccC-CCCCCHH-HHhhhhhHHHHHHHHH-Hh
Confidence            94  55999999999999999999875       7899999999999 9999 9995554 6888999999999999 77


Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh-HHHHHHHHCCCCccEE
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD-LDAALKRCFPEGIDIY  231 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~i~~~~~~~~d~v  231 (347)
                      +++++|++|+|+||+|++|++++|+|+..|++|++++ +++++++++ ++|+++++|+++. + +.+.+     .++|++
T Consensus       148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~-----~g~D~v  219 (321)
T 3tqh_A          148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAIS-----TPVDAV  219 (321)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH-HHTCSEEEETTTS-CHHHHCC-----SCEEEE
T ss_pred             cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH-HcCCCEEEeCCCc-chhhhhc-----cCCCEE
Confidence            8999999999999899999999999999999999998 556688998 9999999999876 5 54443     369999


Q ss_pred             EECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCc
Q 019042          232 FENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL  311 (347)
Q Consensus       232 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  311 (347)
                      |||+|++.+..++++++++|+++.+|.....        ........+++++.++...    ...+.++++++++++|++
T Consensus       220 ~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~g~l  287 (321)
T 3tqh_A          220 IDLVGGDVGIQSIDCLKETGCIVSVPTITAG--------RVIEVAKQKHRRAFGLLKQ----FNIEELHYLGKLVSEDKL  287 (321)
T ss_dssp             EESSCHHHHHHHGGGEEEEEEEEECCSTTHH--------HHHHHHHHTTCEEECCCCC----CCHHHHHHHHHHHHTTSS
T ss_pred             EECCCcHHHHHHHHhccCCCEEEEeCCCCch--------hhhhhhhhcceEEEEEecC----CCHHHHHHHHHHHHCCCc
Confidence            9999998779999999999999999764321        1223455678888875322    226789999999999999


Q ss_pred             ccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          312 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       312 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      ++.++++|+++++++||+.+.+++..||+|++++
T Consensus       288 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          288 RIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             CCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             ccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            9999999999999999999999999999999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.8e-52  Score=377.30  Aligned_cols=318  Identities=14%  Similarity=0.123  Sum_probs=268.7

Q ss_pred             cccccceEEEeeccCCC-CCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            5 EAVSNKQVILSNYVTGF-PKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~-p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      +||+|||++++++  +. .+|..+++++  +|.|.| ++ +||+|||.+++||++|++.+.|.... ..+|.++|||  +
T Consensus        19 ~m~~MkA~~~~~~--~~~~~~~~l~~~~--~p~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E--~   89 (363)
T 4dvj_A           19 YFQSMKAVGYNKP--APITDDASLLDIE--LPKPAP-AG-HDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYD--A   89 (363)
T ss_dssp             CCCEEEEEEBSSC--CCTTSTTSSEEEE--EECCCC-CT-TEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCC--E
T ss_pred             hhheeEEEEEecc--CCCCCCceEEEee--cCCCCC-CC-CEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccce--e
Confidence            4789999999887  42 2235566655  666666 77 99999999999999999888875432 4678999999  5


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCC-
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPK-  156 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~-  156 (347)
                      +|+|+++|++|++|++||+|++.      |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+..+++ 
T Consensus        90 ~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~  166 (363)
T 4dvj_A           90 AGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERI-VGRK-PKTLDWA-EAAALPLTSITAWEAFFDRLDVNK  166 (363)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGG-CEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCTTS
T ss_pred             EEEEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHH-eeEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCcCc
Confidence            56999999999999999999975      7999999999999 9999 9995554 68889999999999998888888 


Q ss_pred             ----CCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          157 ----KGEYVYVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       157 ----~~~~vlI~ga~g~vG~~a~qla~~-~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                          +|++|||+||+|++|++++|+|++ .|++|++++++++++++++ ++|+++++|+++  ++.+.++++.++++|++
T Consensus       167 ~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~Dvv  243 (363)
T 4dvj_A          167 PVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFV  243 (363)
T ss_dssp             CCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCEEEE
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCceEE
Confidence                899999999999999999999998 5889999999999999999 999999999875  78888888855599999


Q ss_pred             EECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-------ccchHHHHHHHH
Q 019042          232 FENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-------YHQYPKFLELVM  303 (347)
Q Consensus       232 id~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~  303 (347)
                      |||+|+. .+..++++++++|+++.++...         ..+...+..+++++.++.....       .....+.+++++
T Consensus       244 id~~g~~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (363)
T 4dvj_A          244 FSTTHTDKHAAEIADLIAPQGRFCLIDDPS---------AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVS  314 (363)
T ss_dssp             EECSCHHHHHHHHHHHSCTTCEEEECSCCS---------SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHH
T ss_pred             EECCCchhhHHHHHHHhcCCCEEEEECCCC---------ccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHH
Confidence            9999984 8899999999999999986531         2345556678888887654321       112257899999


Q ss_pred             HHHHcCCcccccceee---ccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          304 PAIKEGKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       304 ~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      +++++|++++.++.++   +++++++|++.+.+++..||+||++..
T Consensus       315 ~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~  360 (363)
T 4dvj_A          315 RLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG  360 (363)
T ss_dssp             HHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred             HHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence            9999999999888776   999999999999999999999999853

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=4e-51  Score=371.12  Aligned_cols=306  Identities=17%  Similarity=0.182  Sum_probs=264.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++...  + +  ..++++  |.|.|+| +| +||||||.++|||++|++.+.|.+  ...+|.++|||++  |+|+
T Consensus         1 MKA~v~~~~--~-~--~~~~l~--e~~~P~~-~p-~eVLVkv~a~gic~~D~~~~~G~~--~~~~p~i~GhE~a--G~V~   67 (348)
T 4eez_A            1 MKAAVVRHN--P-D--GYADLV--EKELRAI-KP-NEALLDMEYCGVCHTDLHVAAGDF--GNKAGTVLGHEGI--GIVK   67 (348)
T ss_dssp             CEEEEECSS--C-C--SSEEEE--ECCCCCC-CT-TEEEEEEEEEECCHHHHHHHTTTT--CCCTTCBCCSEEE--EEEE
T ss_pred             CeEEEEEcC--C-C--CcEEEE--EeECCCC-CC-CEEEEEEEEEEECHHHHHHhcCCC--CCCCCcccceeEE--EEEE
Confidence            799999654  2 2  224454  4677766 77 999999999999999999988854  3467999999954  5999


Q ss_pred             EecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      ++|++|+++++||||+..                               |+|+||+.++++. ++++ |++++.. ++|+
T Consensus        68 ~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~-~~~i-P~~~~~~-~aa~  144 (348)
T 4eez_A           68 EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADY-AVKV-PDGLDPI-EASS  144 (348)
T ss_dssp             EECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-SCBC-CTTSCHH-HHHH
T ss_pred             EECceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccc-eeec-CCCCCHH-HHhh
Confidence            999999999999999742                               7899999999999 9999 9995554 6899


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDL  216 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  216 (347)
                      ++++++|||+++. ..++++|++|+|+|+ |++|.+++|+|++. |++|++++++++|+++++ ++|+++++|+++. ++
T Consensus       145 l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~Ga~~~i~~~~~-~~  220 (348)
T 4eez_A          145 ITCAGVTTYKAIK-VSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIGADVTINSGDV-NP  220 (348)
T ss_dssp             HHHHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTTCSEEEEC-CC-CH
T ss_pred             cccceeeEEeeec-ccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcCCeEEEeCCCC-CH
Confidence            9999999999994 579999999999996 99999999999976 679999999999999999 9999999999987 99


Q ss_pred             HHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccc
Q 019042          217 DAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ  294 (347)
Q Consensus       217 ~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  294 (347)
                      .+.+++++++ ++|.++|++++ ..+..++++++++|+++.+|.+..      ....+...++.+++++.|+....    
T Consensus       221 ~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~----  290 (348)
T 4eez_A          221 VDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------EMTLSVPTVVFDGVEVAGSLVGT----  290 (348)
T ss_dssp             HHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------EEEECHHHHHHSCCEEEECCSCC----
T ss_pred             HHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCC------CCccCHHHHHhCCeEEEEEecCC----
Confidence            9999999988 99999999987 689999999999999999987532      23456777888999999987665    


Q ss_pred             hHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          295 YPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       295 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                       +++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+||+|+.
T Consensus       291 -~~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          291 -RLDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             -HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             -HHHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence             67899999999999999765 688999999999999999999999999964

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.5e-51  Score=371.45  Aligned_cols=318  Identities=19%  Similarity=0.246  Sum_probs=267.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCC-CCC-cccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLD-KPS-FVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~-~~~-~~~p~v~G~e~~g~G~   86 (347)
                      |||+++.++  |.|  +.+++  .++|.|.| ++ +||+|||.++|||++|++...|.+ ... ..+|.++|||+  +|+
T Consensus         2 Mka~~~~~~--g~~--~~l~~--~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~--~G~   71 (333)
T 1wly_A            2 VMAAVIHKK--GGP--DNFVW--EEVKVGSP-GP-GQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEA--AAV   71 (333)
T ss_dssp             CEEEEESSC--SSG--GGEEE--EECCCCCC-CT-TEEEEEEEEEEECHHHHHHHC----------CCEECCCEE--EEE
T ss_pred             cEEEEEccc--CCc--ceeEE--EeccCCCC-CC-CeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCcccccee--EEE
Confidence            699999888  766  34455  45777766 77 999999999999999999887743 111 34689999995  459


Q ss_pred             EEEecCCCCCCCCCCEEEe----ccCcceeEeecCCCcceeccCCCCCcccc--ccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           87 SKVLDSTHPNYKKDDLVWG----LTSWEEYSLIQSPQHLIKILDTNVPLSYY--TGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~----~g~~~~~~~~~~~~~~~~i~P~~~~~~~~--aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                      |+++|+++++|++||+|++    .|+|+||++++++. ++++ |++++.. +  +|+++.+++|||+++.+.+++++|++
T Consensus        72 V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  148 (333)
T 1wly_A           72 VEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEK-LIKV-PKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKVKPGDY  148 (333)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGG-CEEC-CTTCCCC-HHHHHHHHHHHHHHHHHHHTTSCCCTTCE
T ss_pred             EEEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHH-cEeC-CCCCChH-HhCccchhhhHHHHHHHHHHhhCCCCCCE
Confidence            9999999999999999976    48999999999999 9999 9996554 6  79999999999999987789999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchh
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKM  239 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~  239 (347)
                      |+|+|++|++|++++|+++..|++|+++++++++++.++ ++|++.++|+++. ++.+.+.+.+.+ ++|++|||+|+..
T Consensus       149 vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~vi~~~g~~~  226 (333)
T 1wly_A          149 VLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDT  226 (333)
T ss_dssp             EEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEECSCTTT
T ss_pred             EEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeEEEECCcHHH
Confidence            999999999999999999999999999999999999998 8999999998876 888888887765 8999999999999


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCCCccccchH-HHHhcc--ceeeeeEeccc--ccchHHHHHHHHHHHHcCCcccc
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLM-QVVGKR--IRMEGFLAGDF--YHQYPKFLELVMPAIKEGKLVYV  314 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~g~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~  314 (347)
                      +..++++++++|+++.+|...+.     ....+.. .++.++  +++.|+....+  +..+.+.++++++++++|++++.
T Consensus       227 ~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  301 (333)
T 1wly_A          227 LQKSLDCLRPRGMCAAYGHASGV-----ADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSS  301 (333)
T ss_dssp             HHHHHHTEEEEEEEEECCCTTCC-----CCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred             HHHHHHhhccCCEEEEEecCCCC-----cCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCC
Confidence            99999999999999999875421     1123444 566788  88888754221  23335689999999999999999


Q ss_pred             cceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          315 EDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       315 ~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      ++++|+++++++|++.+.+++..||+|+++++
T Consensus       302 i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          302 VAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             EEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             cceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            99999999999999999998888999999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=5.1e-51  Score=371.58  Aligned_cols=328  Identities=25%  Similarity=0.382  Sum_probs=273.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ++.+|||+++.++  |.+-++.+++. .++|.|.| ++ +||+|||.++|||++|++.+.|.+.....+|+++|||+  +
T Consensus        20 ~~~~MkA~~~~~~--g~~~~~~l~~~-~~~p~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~--~   92 (362)
T 2c0c_A           20 FQSMMQKLVVTRL--SPNFREAVTLS-RDCPVPLP-GD-GDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEG--I   92 (362)
T ss_dssp             HCCEEEEEEECSC--CSSHHHHEEEE-EEEECCCC-CT-TEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEE--E
T ss_pred             chhhceEEEEeec--CCCccceeEEE-eecCCCCC-CC-CeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCcee--E
Confidence            4567999999887  54311224440 45677766 77 99999999999999999988875533346789999995  4


Q ss_pred             eEEEEecCCCC-CCCCCCEEEec--cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEE
Q 019042           85 GVSKVLDSTHP-NYKKDDLVWGL--TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYV  161 (347)
Q Consensus        85 G~v~~vG~~v~-~~~vGd~V~~~--g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~v  161 (347)
                      |+|+++|++|+ +|++||+|+++  |+|+||++++++. ++++ |++  .. ++|+++.+++|||+++.+.+++++|++|
T Consensus        93 G~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~~-P~~--~~-~aaal~~~~~ta~~al~~~~~~~~g~~V  167 (362)
T 2c0c_A           93 GEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASI-ATPV-PSV--KP-EYLTLLVSGTTAYISLKELGGLSEGKKV  167 (362)
T ss_dssp             EEEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGG-CEEC-SSS--CH-HHHTTTTHHHHHHHHHHHHTCCCTTCEE
T ss_pred             EEEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHH-eEEC-CCC--ch-HhhcccchHHHHHHHHHHhcCCCCCCEE
Confidence            59999999999 99999999986  8999999999999 9999 986  33 6889999999999999888899999999


Q ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHH
Q 019042          162 YVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD  241 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~  241 (347)
                      ||+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.+++.+++++|++|||+|...+.
T Consensus       168 lV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~  245 (362)
T 2c0c_A          168 LVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFD  245 (362)
T ss_dssp             EETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEEECSCTHHHH
T ss_pred             EEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEEECCCHHHHH
Confidence            99999999999999999999999999999999999999 8999999999876 888888888755899999999998999


Q ss_pred             HHHHhhccCCEEEEEcccccccCCCC---cc-ccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccc-
Q 019042          242 AVLLNMRIHGRIAVCGMISQYNLEKP---EG-VHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVED-  316 (347)
Q Consensus       242 ~~~~~l~~~G~~v~~g~~~~~~~~~~---~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-  316 (347)
                      .++++++++|+++.+|..........   .. ......++.+++++.|+....+.....+.++++++++++|++++.+. 
T Consensus       246 ~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~  325 (362)
T 2c0c_A          246 LAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDL  325 (362)
T ss_dssp             HHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEEC
T ss_pred             HHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeecc
Confidence            99999999999999998653211000   00 01124567789999998766554445778999999999999988654 


Q ss_pred             -------eeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          317 -------IAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       317 -------~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                             ..++++++++|++.+.+++..||+|+++++
T Consensus       326 ~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          326 GDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             STTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             ccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence                   567999999999999988888999999864

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-50  Score=370.96  Aligned_cols=312  Identities=19%  Similarity=0.230  Sum_probs=265.6

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      +|+|||++++++  +.+    +++++  +|.|.| ++ +||+|||+++|||++|++.+.|.+.  ..+|+++|||  ++|
T Consensus         4 ~~~mka~~~~~~--g~~----l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE--~~G   69 (371)
T 1f8f_A            4 LKDIIAAVTPCK--GAD----FELQA--LKIRQP-QG-DEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHE--GSG   69 (371)
T ss_dssp             CEEEEEEEBCST--TCC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCE--EEE
T ss_pred             cccceEEEEcCC--CCC----eEEEE--ecCCCC-CC-CEEEEEEEEeecCchhHHHHcCCCC--CCCCcccCcc--cce
Confidence            567999999887  544    45654  566656 77 9999999999999999998887542  3568999999  455


Q ss_pred             EEEEecCCCCCCCCCCEEEe----------------------------------------------------ccCcceeE
Q 019042           86 VSKVLDSTHPNYKKDDLVWG----------------------------------------------------LTSWEEYS  113 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~----------------------------------------------------~g~~~~~~  113 (347)
                      +|+++|++|++|++||+|++                                                    .|+|+||+
T Consensus        70 ~V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~  149 (371)
T 1f8f_A           70 IIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYA  149 (371)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEE
T ss_pred             EEEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeE
Confidence            99999999999999999985                                                    17899999


Q ss_pred             eecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH
Q 019042          114 LIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK  192 (347)
Q Consensus       114 ~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~  192 (347)
                      +++++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++
T Consensus       150 ~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~  225 (371)
T 1f8f_A          150 LSRENN-TVKV-TKDVPIE-LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE  225 (371)
T ss_dssp             EEEGGG-EEEE-CTTSCGG-GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH
T ss_pred             Eechhh-eEEC-CCCCCHH-HHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCH
Confidence            999999 9999 9996554 688899999999999977789999999999995 9999999999999999 799999999


Q ss_pred             HHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCcccc
Q 019042          193 EKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVH  271 (347)
Q Consensus       193 ~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  271 (347)
                      +++++++ ++|+++++|+++. ++.+.+++.+++++|++||++|. ..+..++++++++|+++.+|.....    .....
T Consensus       226 ~~~~~a~-~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~  299 (371)
T 1f8f_A          226 SRLELAK-QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQF  299 (371)
T ss_dssp             HHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCC
T ss_pred             HHHHHHH-HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC----Ccccc
Confidence            9999999 9999999999876 88899998887789999999998 6889999999999999999875421    11234


Q ss_pred             chHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCccc--ccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          272 NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       272 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      +...++.+++++.|+....+  ...+.++++++++++|++++  .+++ |+++++++|++.+.+++. +|+||+++
T Consensus       300 ~~~~~~~~~~~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          300 DVNDLLLGGKTILGVVEGSG--SPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             CHHHHHHTTCEEEECSGGGS--CHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             CHHHHHhCCCEEEEeCCCCC--chHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            55667788999998865432  12577999999999999985  4677 999999999999988775 79999874

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=9.9e-52  Score=375.85  Aligned_cols=321  Identities=18%  Similarity=0.237  Sum_probs=263.0

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            4 EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         4 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      .|+.+|||+++.++  |.|. +.+++  .++|.|.| ++ +||+|||.++|||++|++.+.|.+.....+|.++|||+  
T Consensus        22 ~m~~~mka~~~~~~--g~~~-~~l~~--~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~--   92 (357)
T 1zsy_A           22 SMPARVRALVYGHH--GDPA-KVVEL--KNLELAAV-RG-SDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEG--   92 (357)
T ss_dssp             CCCCCEEEEEESSS--SCHH-HHEEE--EEECCCCC-CT-TEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCC--
T ss_pred             hCchhhEEEEEecC--CCcc-ceEEE--eeccCCCC-CC-CEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceE--
Confidence            46778999999887  6652 12344  45677766 77 99999999999999999988875433334689999995  


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCC
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGE  159 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  159 (347)
                      +|+|+++|+++++|++||+|++.    |+|+||++++++. ++++ |++++.. ++|++++.++|||+++.+.+++++|+
T Consensus        93 ~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~Aa~l~~~~~ta~~~l~~~~~~~~g~  169 (357)
T 1zsy_A           93 VAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEA-LIQV-PSDIPLQ-SAATLGVNPCTAYRMLMDFEQLQPGD  169 (357)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGG-EEEE-CSSSCHH-HHHHTTSHHHHHHHHHHHSSCCCTTC
T ss_pred             EEEEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHH-cEEC-CCCCCHH-HHhhhcccHHHHHHHHHHHhccCCCC
Confidence            45999999999999999999976    8999999999999 9999 9995554 68889999999999998778999999


Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC--CccEEEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----EKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE--GIDIYFE  233 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~----~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~--~~d~vid  233 (347)
                      +|||+|++|++|++++|+|+..|++++++++++    +++++++ ++|+++++|+++.  ..+.+.+.+.+  ++|++||
T Consensus       170 ~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~--~~~~~~~~~~~~~~~Dvvid  246 (357)
T 1zsy_A          170 SVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK-SLGAEHVITEEEL--RRPEMKNFFKDMPQPRLALN  246 (357)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH-HTTCSEEEEHHHH--HSGGGGGTTSSSCCCSEEEE
T ss_pred             EEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH-hcCCcEEEecCcc--hHHHHHHHHhCCCCceEEEE
Confidence            999999999999999999999999988887543    3567888 9999999987532  22345555554  5999999


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-----ccchHHHHHHHHHHHHc
Q 019042          234 NVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKE  308 (347)
Q Consensus       234 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~  308 (347)
                      |+|+.....++++++++|+++.+|.....     ....+...++.+++++.|+....+     +...++.++++++++++
T Consensus       247 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~  321 (357)
T 1zsy_A          247 CVGGKSSTELLRQLARGGTMVTYGGMAKQ-----PVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRR  321 (357)
T ss_dssp             SSCHHHHHHHHTTSCTTCEEEECCCCTTC-----CBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHhhCCCCEEEEEecCCCC-----CCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHc
Confidence            99997777899999999999999864321     123345567779999999876543     22345678999999999


Q ss_pred             CCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          309 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       309 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      |++++.+.++|+++++++|++.+.+++..||+|+++
T Consensus       322 g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          322 GQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             TSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             CCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            999998888999999999999999888889999975

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.6e-50  Score=370.19  Aligned_cols=312  Identities=18%  Similarity=0.213  Sum_probs=262.1

Q ss_pred             cccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCcee
Q 019042            3 GEEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLS   82 (347)
Q Consensus         3 ~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~   82 (347)
                      ...||+|||+++.++  +.+    +++++  +|.|.| ++ +||||||++++||++|++.+.|...  ..+|.++|||++
T Consensus         4 ~~~p~~mka~~~~~~--g~~----l~~~~--~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~   71 (373)
T 1p0f_A            4 AGKDITCKAAVAWEP--HKP----LSLET--ITVAPP-KA-HEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAV   71 (373)
T ss_dssp             TTSCEEEEEEEBSST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEE
T ss_pred             cCCcceeEEEEEEcC--CCC----eeEEE--eeCCCC-CC-CeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCce
Confidence            456889999999887  544    45654  566656 77 9999999999999999998887442  456999999954


Q ss_pred             eceEEEEecCCCCCCCCCCEEEec---------------------------------------------------cCcce
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEE  111 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~  111 (347)
                        |+|+++|++|++|++||||++.                                                   |+|+|
T Consensus        72 --G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~ae  149 (373)
T 1p0f_A           72 --GVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTE  149 (373)
T ss_dssp             --EEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBS
T ss_pred             --EEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCcccee
Confidence              5999999999999999999853                                                   78999


Q ss_pred             eEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeC
Q 019042          112 YSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAG  190 (347)
Q Consensus       112 ~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~  190 (347)
                      |++++++. ++++ |++++.  ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++
T Consensus       150 y~~v~~~~-~~~i-P~~l~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~  224 (373)
T 1p0f_A          150 YTVVADIA-VAKI-DPKAPL--ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGT  224 (373)
T ss_dssp             EEEEETTS-EEEE-CTTCCG--GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS
T ss_pred             EEEEchhh-EEEC-CCCCCh--hhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            99999999 9999 999555  477788899999999877789999999999995 9999999999999999 8999999


Q ss_pred             CHHHHHHHHHHhCCCeeEecCC--hhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCC
Q 019042          191 SKEKVNLLKNKFGFDDAFNYKK--EPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEK  266 (347)
Q Consensus       191 ~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  266 (347)
                      +++++++++ ++|+++++|+++  . ++.+.+++++++++|++|||+|. +.+..++++++++ |+++.+|.....    
T Consensus       225 ~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----  298 (373)
T 1p0f_A          225 HKDKFPKAI-ELGATECLNPKDYDK-PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----  298 (373)
T ss_dssp             CGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----
T ss_pred             CHHHHHHHH-HcCCcEEEecccccc-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCC----
Confidence            999999999 999999999874  3 78889999887789999999998 6899999999999 999999875421    


Q ss_pred             CccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          267 PEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .....+...++.++ ++.|+....+.   .+.++++++++++|+++  +.++++|+++++++|++.+.+++. +|+||++
T Consensus       299 ~~~~~~~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          299 ERLPLDPLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             CCEEECTHHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             CccccCHHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            11233445566677 88887654321   25688999999999987  467889999999999999987764 7999875

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=5.2e-51  Score=369.28  Aligned_cols=311  Identities=23%  Similarity=0.289  Sum_probs=267.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +.|  +.+++  .++|.|.| ++ +||+|||++++||++|++...|.+.....+|.++|||+  +|+|+
T Consensus         1 Mka~~~~~~--g~~--~~l~~--~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~--~G~V~   70 (343)
T 2eih_A            1 MRAVVMRAR--GGP--EVLEV--ADLPVPEP-GP-KEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADG--SGVVD   70 (343)
T ss_dssp             CEEEEECSS--SSG--GGEEE--EECCCCCC-CT-TEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEE--EEEEE
T ss_pred             CeEEEEecC--CCC--ceEEE--EecCCCCC-CC-CEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccce--EEEEE
Confidence            689999888  666  23444  45777766 77 99999999999999999988875432235789999995  45999


Q ss_pred             EecCCCCCCCCCCEEE-------e--------------------c---cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVW-------G--------------------L---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~-------~--------------------~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      ++|+++++|++||+|+       +                    +   |+|+||++++++. ++++ |++++.. ++|++
T Consensus        71 ~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l  147 (343)
T 2eih_A           71 AVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEAN-LAPK-PKNLSFE-EAAAI  147 (343)
T ss_dssp             EECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHHHS
T ss_pred             EECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHH-eEEC-CCCCCHH-HHhhc
Confidence            9999999999999999       4                    3   7899999999999 9999 9995544 57779


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                      +.++.|||+++.+.+++++|++|||+|++|++|++++|++++.|++|+++++++++++.++ ++|+++++|+++. ++.+
T Consensus       148 ~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~  225 (343)
T 2eih_A          148 PLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYTHP-DWPK  225 (343)
T ss_dssp             HHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTST-THHH
T ss_pred             hhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEcCCcc-cHHH
Confidence            9999999999977679999999999999999999999999999999999999999999998 8999999999876 8888


Q ss_pred             HHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHH
Q 019042          219 ALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK  297 (347)
Q Consensus       219 ~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  297 (347)
                      .+.+.+++ ++|++||++|.+.+..++++++++|+++.+|.....     ....+...++.+++++.|+....     .+
T Consensus       226 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~-----~~  295 (343)
T 2eih_A          226 EVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMAS-----KS  295 (343)
T ss_dssp             HHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSCC-----GG
T ss_pred             HHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCcc-----HH
Confidence            89888876 899999999988999999999999999999875432     11244556778899998875433     56


Q ss_pred             HHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          298 FLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       298 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .++++++++++|++++.++++|+++++++||+.+.+++..||+|+++
T Consensus       296 ~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          296 RLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             GHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            78999999999999999999999999999999999888889999986

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=9.8e-52  Score=377.19  Aligned_cols=321  Identities=17%  Similarity=0.208  Sum_probs=263.1

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCC-CCCCCeEEEEEEEeecChhccccccCCCCCCcccC---------C
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVP-EGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVAS---------F   75 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~-~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p---------~   75 (347)
                      ||+|||++++++  |.|. +.+++++  +|.|.| .++ +||+|||+++|||++|++.+.|.+.....+|         .
T Consensus         1 ~~~mka~~~~~~--g~~~-~~l~~~~--~~~P~p~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~   74 (364)
T 1gu7_A            1 MITAQAVLYTQH--GEPK-DVLFTQS--FEIDDDNLAP-NEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAA   74 (364)
T ss_dssp             CEEEEEEEESSC--SCHH-HHCEEEE--EEECTTSCCT-TEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBE
T ss_pred             CceEEEEEeccC--CCch-heeEEee--ccCCCCCCCC-CeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCccc
Confidence            678999999887  6541 2245655  555555 137 9999999999999999998887543223346         8


Q ss_pred             CCCCceeeceEEEEecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCC-----------CCCccccccccCC
Q 019042           76 NPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDT-----------NVPLSYYTGILGM  140 (347)
Q Consensus        76 v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~-----------~~~~~~~aa~l~~  140 (347)
                      ++|||+  +|+|+++|+++++|++||+|++.    |+|+||++++++. ++++ |+           +++.. ++|++++
T Consensus        75 i~G~E~--~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~~~~~~~~~~~~-~aa~l~~  149 (364)
T 1gu7_A           75 PCGNEG--LFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNPAQSKANGKPNGLTIN-QGATISV  149 (364)
T ss_dssp             ECCSCC--EEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCHHHHHHTTCSCCCCHH-HHHTCTT
T ss_pred             ccCcee--EEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHH-eEEc-CCccccccccccCCCCHH-HHhhccc
Confidence            999995  45999999999999999999976    8999999999999 9999 98           75554 6888999


Q ss_pred             chhhHHHHhhhhcCCCCC-CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHhCCCeeEecCC---
Q 019042          141 PGLTAYGGLYELCSPKKG-EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK----VNLLKNKFGFDDAFNYKK---  212 (347)
Q Consensus       141 ~~~tA~~~l~~~~~~~~~-~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~----~~~~~~~~g~~~vi~~~~---  212 (347)
                      +++|||+++.+.+++++| ++|||+|++|++|++++|+|+.+|++|++++++.++    .+.++ ++|+++++|+++   
T Consensus       150 ~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~  228 (364)
T 1gu7_A          150 NPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNS  228 (364)
T ss_dssp             HHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHHC
T ss_pred             cHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccch
Confidence            999999999876799999 999999999999999999999999999999866543    57787 999999999875   


Q ss_pred             hhhHHHHHHHHC--CC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEec
Q 019042          213 EPDLDAALKRCF--PE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG  289 (347)
Q Consensus       213 ~~~~~~~i~~~~--~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  289 (347)
                      . ++.+.+++++  ++ ++|++|||+|+.....++++++++|+++.+|.....     ....+...++.+++++.|+...
T Consensus       229 ~-~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~  302 (364)
T 1gu7_A          229 R-EFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTSAGFWVT  302 (364)
T ss_dssp             G-GGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEEEECCHH
T ss_pred             H-HHHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCC-----CcccCHHHHhhcCcEEEEEchh
Confidence            4 7888888887  44 899999999997666889999999999999875421     1234455677799999998665


Q ss_pred             cc----ccchHHHHHHHHHHHHcCCcccccceeeccc---cHHHHHHHhHcCCCcceEEEEe
Q 019042          290 DF----YHQYPKFLELVMPAIKEGKLVYVEDIAEGLE---KAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       290 ~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .+    +....+.++++++++++|++++.+..+++++   ++.+||+.+.+++..||+|+++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          303 ELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            43    2223577999999999999998777777664   9999999999888889999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=2.9e-52  Score=378.31  Aligned_cols=319  Identities=18%  Similarity=0.192  Sum_probs=265.7

Q ss_pred             cccccceEEEe--eccCC-CCCCCCeEEEee-------cccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccC
Q 019042            5 EAVSNKQVILS--NYVTG-FPKESDMKIITG-------SINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVAS   74 (347)
Q Consensus         5 ~~~~~~a~~~~--~~~~~-~p~~~~~~~~~~-------~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p   74 (347)
                      |+.+|||++++  ++  + .|  +.+++++.       ++|.|.| ++ +||+|||++++||++|++.+.|.+.....+|
T Consensus         7 ~p~~mka~~~~~~~~--~~~~--~~l~~~~~~~~~~~~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p   80 (349)
T 3pi7_A            7 IPSEMKALLLVGDGY--TKTP--SGSALEAMEPYLEQGRIAVPAP-GP-SQVLIKVNLASINPSDVAFIKGQYGQPRVKG   80 (349)
T ss_dssp             CCSEEEEEEECSCBS--CSSC--CCSCCCCSTTTEEEEEEECCCC-CT-TEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred             CchhheEEEEEcccc--CCCc--ccceEEEeecccccccCCCCCC-CC-CeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence            46789999998  54  3 23  34444432       1277766 77 9999999999999999999988654445679


Q ss_pred             CCCCCceeeceEEEEecCCC-CCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHH
Q 019042           75 FNPGEPLSGYGVSKVLDSTH-PNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYG  147 (347)
Q Consensus        75 ~v~G~e~~g~G~v~~vG~~v-~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~  147 (347)
                      .++|||+  +|+|+++|++| ++|++||+|++.      |+|+||++++++. ++++ |++++.. ++|++++.++|||+
T Consensus        81 ~v~G~E~--~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~  155 (349)
T 3pi7_A           81 RPAGFEG--VGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAA-CIPL-LDTVRDE-DGAAMIVNPLTAIA  155 (349)
T ss_dssp             SBCCSEE--EEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGG-EEEC-CTTCCC---GGGSSHHHHHHHH
T ss_pred             CCccceE--EEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHH-eEEC-CCCCCHH-HHhhccccHHHHHH
Confidence            9999995  45999999999 999999999964      7999999999999 9999 9996555 68899999999997


Q ss_pred             HhhhhcCCCCC-CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC
Q 019042          148 GLYELCSPKKG-EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       148 ~l~~~~~~~~~-~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ++ +.++ ++| ++|+|+||+|++|++++|+|++.|++|+++++++++++.++ ++|+++++|+++. ++.+.+++.+++
T Consensus       156 ~~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~v~~~~~~  231 (349)
T 3pi7_A          156 MF-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVMKA  231 (349)
T ss_dssp             HH-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEEEETTST-THHHHHHHHHHH
T ss_pred             HH-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCcH-HHHHHHHHHhcC
Confidence            66 4456 666 79999999999999999999999999999999999999999 9999999999887 899999998876


Q ss_pred             -CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccch-HHHHhccceeeeeEeccc----ccchHHHHH
Q 019042          227 -GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL-MQVVGKRIRMEGFLAGDF----YHQYPKFLE  300 (347)
Q Consensus       227 -~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~----~~~~~~~~~  300 (347)
                       ++|++|||+|+..+..++++++++|+++.+|.....     ....+. ..++.+++++.|+....+    +....+.++
T Consensus       232 ~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (349)
T 3pi7_A          232 EQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPD-----ATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAIL  306 (349)
T ss_dssp             HCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCS-----CCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHH
T ss_pred             CCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCC-----CCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHH
Confidence             899999999998889999999999999999975432     123444 677889999999877654    233467889


Q ss_pred             HHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          301 LVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       301 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++++++++|++++.++++|+++++++||+. .+++..||+||++
T Consensus       307 ~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          307 EAQKRFSDGRWSTDVTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             HC-CTTTTSSCCC-CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             HHHHHHHcCCcccccceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            999999999999999999999999999994 4555779999974

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=2.6e-50  Score=369.12  Aligned_cols=310  Identities=18%  Similarity=0.221  Sum_probs=262.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      .||+|||+++.++  +.+    +++++  +|.|.| ++ +||+|||++++||++|++.+.|.  ....+|.++|||+  +
T Consensus         5 ~p~~mka~~~~~~--g~~----l~~~~--~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~--~~~~~P~v~GhE~--~   70 (376)
T 1e3i_A            5 KVIKCKAAIAWKT--GSP----LCIEE--IEVSPP-KA-CEVRIQVIATCVCPTDINATDPK--KKALFPVVLGHEC--A   70 (376)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHTTCTT--SCCCSSBCCCCEE--E
T ss_pred             CChheeEEEEecC--CCC----eEEEE--eeCCCC-CC-CeEEEEEeEEeEchhhHHHhcCC--CCCCCCcccCccc--c
Confidence            4789999999887  544    46655  566655 77 99999999999999999988874  2245799999994  5


Q ss_pred             eEEEEecCCCCCCCCCCEEEec-------------------------------------------------------cCc
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL-------------------------------------------------------TSW  109 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~-------------------------------------------------------g~~  109 (347)
                      |+|+++|++|+++++||||++.                                                       |+|
T Consensus        71 G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~  150 (376)
T 1e3i_A           71 GIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSF  150 (376)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCS
T ss_pred             EEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccc
Confidence            5999999999999999999852                                                       789


Q ss_pred             ceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEE
Q 019042          110 EEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGS  188 (347)
Q Consensus       110 ~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~  188 (347)
                      +||++++++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++
T Consensus       151 aey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~  226 (376)
T 1e3i_A          151 SQYTVVSEAN-LARV-DDEANLE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAI  226 (376)
T ss_dssp             BSEEEEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEE
T ss_pred             eeEEEecccc-EEEC-CCCCCHH-HhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            9999999999 9999 9995554 688899999999999877789999999999995 9999999999999999 89999


Q ss_pred             eCCHHHHHHHHHHhCCCeeEecCC--hhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccC
Q 019042          189 AGSKEKVNLLKNKFGFDDAFNYKK--EPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNL  264 (347)
Q Consensus       189 ~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~  264 (347)
                      +++++++++++ ++|+++++|+++  . ++.+.+++++++++|++|||+|. +.+..++++++++ |+++.+|...    
T Consensus       227 ~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~----  300 (376)
T 1e3i_A          227 DINGEKFPKAK-ALGATDCLNPRELDK-PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV----  300 (376)
T ss_dssp             CSCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS----
T ss_pred             cCCHHHHHHHH-HhCCcEEEccccccc-hHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCC----
Confidence            99999999999 999999999874  3 78888888887789999999997 6889999999999 9999998732    


Q ss_pred             CCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEE
Q 019042          265 EKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLV  342 (347)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi  342 (347)
                        .....+...++.++ ++.|+....+  ...+.++++++++++|+++  +.++++|+|+++++|++.+.+++ .+|+||
T Consensus       301 --~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi  374 (376)
T 1e3i_A          301 --DEMTIPTVDVILGR-SINGTFFGGW--KSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTIL  374 (376)
T ss_dssp             --SEEEEEHHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEE
T ss_pred             --CccccCHHHhhccC-eEEEEecCCC--CcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEE
Confidence              11234555666677 8888765432  1257899999999999987  46788999999999999998876 479999


Q ss_pred             Ee
Q 019042          343 VV  344 (347)
Q Consensus       343 ~~  344 (347)
                      ++
T Consensus       375 ~~  376 (376)
T 1e3i_A          375 TF  376 (376)
T ss_dssp             EC
T ss_pred             eC
Confidence            75

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=4.8e-50  Score=365.00  Aligned_cols=336  Identities=34%  Similarity=0.551  Sum_probs=272.8

Q ss_pred             ccccccccceEEEe-ecc-CCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCC----CCCCcccCC
Q 019042            2 AGEEAVSNKQVILS-NYV-TGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL----DKPSFVASF   75 (347)
Q Consensus         2 ~~~~~~~~~a~~~~-~~~-~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~----~~~~~~~p~   75 (347)
                      +..||++|||+++. ++. .|.|.++.+++++  +|.|.|.++ +||+|||+++|||++|++.+.+.    +.....+|.
T Consensus         2 ~~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~--~~~P~~~~~-~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~   78 (357)
T 2zb4_A            2 AAAAAMIVQRVVLNSRPGKNGNPVAENFRMEE--VYLPDNINE-GQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQ   78 (357)
T ss_dssp             ----CCEEEEEEECCCCCTTSCCCGGGEEEEE--EECCSCCCT-TEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTS
T ss_pred             CCcccccceEEEEeccCCCCCCCCcCceEEEe--ecCCCCCCC-CeEEEEEEEEecCHHHHhhccccccccccCCCCCCc
Confidence            45689999999994 430 2445335566665  566655366 99999999999999998766641    211235688


Q ss_pred             CCCCceeeceEEEEecCCCCCCCCCCEEEec-cCcceeEeecCCCcceeccCCCC---CccccccccCCchhhHHHHhhh
Q 019042           76 NPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEEYSLIQSPQHLIKILDTNV---PLSYYTGILGMPGLTAYGGLYE  151 (347)
Q Consensus        76 v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~-g~~~~~~~~~~~~~~~~i~P~~~---~~~~~aa~l~~~~~tA~~~l~~  151 (347)
                      ++|||+  +|+|++  +++++|++||+|++. |+|+||++++++. ++++ |+++   +.++++|+++.+++|||+++.+
T Consensus        79 v~G~E~--~G~V~~--~~v~~~~vGdrV~~~~G~~aey~~v~~~~-~~~i-P~~~~~~~~~~~~a~l~~~~~ta~~al~~  152 (357)
T 2zb4_A           79 VVDGGG--IGIIEE--SKHTNLTKGDFVTSFYWPWQTKVILDGNS-LEKV-DPQLVDGHLSYFLGAIGMPGLTSLIGIQE  152 (357)
T ss_dssp             BCEEEE--EEEEEE--ECSTTCCTTCEEEEEEEESBSEEEEEGGG-CEEC-CGGGGTTCGGGGGTTTSHHHHHHHHHHHH
T ss_pred             cccccE--EEEEEe--cCCCCCCCCCEEEecCCCcEEEEEEchHH-ceec-CcccccCchhHHHHhcccHHHHHHHHHHH
Confidence            999994  459999  889999999999987 7999999999999 9999 9995   1254678999999999999977


Q ss_pred             hcCCCCC--CEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCc
Q 019042          152 LCSPKKG--EYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       152 ~~~~~~~--~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      .+++++|  ++|+|+|++|++|++++|+++..|+ +|+++++++++++.+++++|++.++|+.+. ++.+.+.+.+.+++
T Consensus       153 ~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~  231 (357)
T 2zb4_A          153 KGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGV  231 (357)
T ss_dssp             HSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTS-CHHHHHHHHCTTCE
T ss_pred             hcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCch-HHHHHHHHhcCCCC
Confidence            7899999  9999999999999999999999999 999999999999998834999999999876 88888888886689


Q ss_pred             cEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCcccc----chHHHHhccceeeeeEecccccchHHHHHHHHH
Q 019042          229 DIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVH----NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP  304 (347)
Q Consensus       229 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  304 (347)
                      |++|||+|+..+..++++++++|+++.+|.........+....    ....++.+++++.++....+.....+.++++++
T Consensus       232 d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  311 (357)
T 2zb4_A          232 DVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQ  311 (357)
T ss_dssp             EEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHH
Confidence            9999999998999999999999999999986542111110000    024567789999998765554555788999999


Q ss_pred             HHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          305 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       305 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      ++++|++++.+..+|+++++++||+.+.+++..||+|++++++
T Consensus       312 l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  354 (357)
T 2zb4_A          312 WFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE  354 (357)
T ss_dssp             HHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred             HHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence            9999999988878899999999999999988889999998753

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=4.4e-51  Score=370.46  Aligned_cols=304  Identities=17%  Similarity=0.153  Sum_probs=258.2

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      |.|+|||+++.++  +.+    +++++  +|.|.| ++ +||+|||+++|||++|++.+.+.... ..+|.++|||++  
T Consensus         1 M~m~mka~~~~~~--~~~----l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~--   67 (348)
T 3two_A            1 MRVQSKGFAIFSK--DEH----FKPHD--FSRHAV-GP-RDVLIDILYAGICHSDIHSAYSEWKE-GIYPMIPGHEIA--   67 (348)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEEECHHHHHHHTTSSSC-CCSSBCCCCCEE--
T ss_pred             CceEEEEEEEccC--CCC----CeEEE--eeCCCC-CC-CeEEEEEEEeeecccchhhhcCCCCC-CCCCeecCccee--
Confidence            5689999999887  544    56655  566655 77 99999999999999999988875432 467999999954  


Q ss_pred             eEEEEecCCCCCCCCCCEEEec----------------------------------------cCcceeEeecCCCcceec
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL----------------------------------------TSWEEYSLIQSPQHLIKI  124 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~----------------------------------------g~~~~~~~~~~~~~~~~i  124 (347)
                      |+|+++|++|++|++||+|+..                                        |+|+||++++++. ++++
T Consensus        68 G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~i  146 (348)
T 3two_A           68 GIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENY-VISV  146 (348)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGG-CEEC
T ss_pred             EEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhh-EEEC
Confidence            5999999999999999999752                                        8999999999999 9999


Q ss_pred             cCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Q 019042          125 LDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF  204 (347)
Q Consensus       125 ~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~  204 (347)
                       |++++.. ++|++++++.|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|++++++++++++++ ++|+
T Consensus       147 -P~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa  221 (348)
T 3two_A          147 -DKNAPLE-KVAPLLCAGITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGV  221 (348)
T ss_dssp             -CTTSCHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HTTC
T ss_pred             -CCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCC
Confidence             9996554 688999999999999965 69999999999996 99999999999999999999999999999999 9999


Q ss_pred             CeeEecCChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHH-hccce
Q 019042          205 DDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV-GKRIR  282 (347)
Q Consensus       205 ~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~  282 (347)
                      ++++ .+.. ++    .    .++|++|||+|+. .+..++++++++|+++.+|.....    +....+...++ .++++
T Consensus       222 ~~v~-~~~~-~~----~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~~  287 (348)
T 3two_A          222 KHFY-TDPK-QC----K----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE----VAPVLSVFDFIHLGNRK  287 (348)
T ss_dssp             SEEE-SSGG-GC----C----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG----GCCEEEHHHHHHTCSCE
T ss_pred             Ceec-CCHH-HH----h----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC----CcccCCHHHHHhhCCeE
Confidence            9888 3221 21    1    1699999999996 999999999999999999875411    11124556666 89999


Q ss_pred             eeeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          283 MEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       283 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      +.|+....     .+.++++++++++|++++.+ ++|+++++++||+.+.+++..||+||+++++
T Consensus       288 i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          288 VYGSLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             EEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             EEEEecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            99987765     57799999999999999865 6899999999999999999999999999753

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.2e-50  Score=367.21  Aligned_cols=304  Identities=19%  Similarity=0.208  Sum_probs=263.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC-CcccCCCCCCceeeceEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP-SFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~-~~~~p~v~G~e~~g~G~v   87 (347)
                      |||++++++  +.|    +++++  +|.|+| ++ +||+|||++++||++|++.+.+.... ...+|.++|||+  +|+|
T Consensus         1 MkA~~~~~~--g~~----l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~--~G~V   68 (345)
T 3jv7_A            1 MKAVQYTEI--GSE----PVVVD--IPTPTP-GP-GEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEG--VGTV   68 (345)
T ss_dssp             CEEEEECST--TSC----CEEEE--CCCCCC-CT-TCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEE--EEEE
T ss_pred             CeEEEEcCC--CCc----eEEEE--ecCCCC-CC-CeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCccc--EEEE
Confidence            699999888  665    45554  677766 77 99999999999999999988875432 246789999994  5599


Q ss_pred             EEecCCCCCCCCCCEEEe-----------------------------------ccCcceeEeec-CCCcceeccCCCCCc
Q 019042           88 KVLDSTHPNYKKDDLVWG-----------------------------------LTSWEEYSLIQ-SPQHLIKILDTNVPL  131 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~-----------------------------------~g~~~~~~~~~-~~~~~~~i~P~~~~~  131 (347)
                      +++|+++++|++||+|++                                   .|+|+||++++ ++. ++++ |+ ++.
T Consensus        69 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~-~~~~-p~-~~~  145 (345)
T 3jv7_A           69 AELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARH-LVPI-GD-LDP  145 (345)
T ss_dssp             EEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGG-EEEC-TT-CCH
T ss_pred             EEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhc-eEeC-CC-CCH
Confidence            999999999999999986                                   37899999999 777 9999 98 666


Q ss_pred             cccccccCCchhhHHHHhhh-hcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEe
Q 019042          132 SYYTGILGMPGLTAYGGLYE-LCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFN  209 (347)
Q Consensus       132 ~~~aa~l~~~~~tA~~~l~~-~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~  209 (347)
                      . ++|+++++++|||+++.+ ...+++|++|+|+|+ |++|++++|+|++. |++|++++++++++++++ ++|+++++|
T Consensus       146 ~-~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lGa~~~i~  222 (345)
T 3jv7_A          146 V-AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVK  222 (345)
T ss_dssp             H-HHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTTCSEEEE
T ss_pred             H-HhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEc
Confidence            5 688999999999999977 458999999999997 99999999999999 679999999999999999 999999999


Q ss_pred             cCChhhHHHHHHHHCCC-CccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeE
Q 019042          210 YKKEPDLDAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFL  287 (347)
Q Consensus       210 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  287 (347)
                      +++  ++.+.+++++++ ++|++|||+|+. .++.++++++++|+++.+|.....     ....+. .++.+++++.++.
T Consensus       223 ~~~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~-~~~~~~~~i~g~~  294 (345)
T 3jv7_A          223 SGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-----HAKVGF-FMIPFGASVVTPY  294 (345)
T ss_dssp             CST--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-----CEEEST-TTSCTTCEEECCC
T ss_pred             CCC--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----CCCcCH-HHHhCCCEEEEEe
Confidence            875  788899999887 999999999995 999999999999999999976432     112333 5667899999887


Q ss_pred             ecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          288 AGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ...     .+.++++++++++|++++ ++++|+++++++||+.+.+++..||+||++
T Consensus       295 ~~~-----~~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          295 WGT-----RSELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             SCC-----HHHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             cCC-----HHHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            665     688999999999999998 558899999999999999999999999864

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=2.6e-50  Score=368.06  Aligned_cols=320  Identities=13%  Similarity=0.153  Sum_probs=257.5

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ||.+|||+++.++       ..++++ .++|.|.| ++ +||+|||++++||++|++.+.+.    ..+|.++|||+  +
T Consensus         8 ~p~~mkA~v~~~~-------~~l~~~-~~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~----~~~p~v~G~e~--~   71 (371)
T 3gqv_A            8 PPPQQTALTVNDH-------DEVTVW-NAAPCPML-PR-DQVYVRVEAVAINPSDTSMRGQF----ATPWAFLGTDY--A   71 (371)
T ss_dssp             CCSCEEEEEECTT-------SCEEEE-EEECCCCC-CT-TSEEEEEEEEECCGGGGC---------CCTTSCCCSEE--E
T ss_pred             CchhceeEEEcCC-------CceEEe-ccCCCCCC-CC-CEEEEEEEEEEcCHHHHHHhhcC----CCCCccCcccc--E
Confidence            4568999999766       335555 14667766 77 99999999999999999887662    34689999995  5


Q ss_pred             eEEEEecCCCCCCCCCCEEEec-----------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhh-
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL-----------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYEL-  152 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~-----------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~-  152 (347)
                      |+|+++|++|++|++||||++.           |+|+||++++++. ++++ |++++.. ++|++++++.|||+++.+. 
T Consensus        72 G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~  148 (371)
T 3gqv_A           72 GTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRV-WAKI-PKGLSFE-QAAALPAGISTAGLAMKLLG  148 (371)
T ss_dssp             EEEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTC-EEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhh-eEEC-CCCCCHH-HHhhhhhhHHHHHHHHHhhc
Confidence            5999999999999999999975           7999999999999 9999 9995554 5888899999999999776 


Q ss_pred             cCC-----------CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHH
Q 019042          153 CSP-----------KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALK  221 (347)
Q Consensus       153 ~~~-----------~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~  221 (347)
                      .++           ++|++|||+|++|++|++++|+|+..|++|++++ +++++++++ ++|+++++|+++. ++.+.++
T Consensus       149 ~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi~~~~~-~~~~~v~  225 (371)
T 3gqv_A          149 LPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYRAP-NLAQTIR  225 (371)
T ss_dssp             CCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTST-THHHHHH
T ss_pred             cCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-HcCCcEEEECCCc-hHHHHHH
Confidence            443           8999999999989999999999999999999997 788889999 9999999999987 9999999


Q ss_pred             HHCCCCccEEEECCCc-hhHHHHHHhh-ccCCEEEEEcccccccCCC---CccccchHHHHhccceeeeeEeccc----c
Q 019042          222 RCFPEGIDIYFENVGG-KMLDAVLLNM-RIHGRIAVCGMISQYNLEK---PEGVHNLMQVVGKRIRMEGFLAGDF----Y  292 (347)
Q Consensus       222 ~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~----~  292 (347)
                      +++++++|++|||+|+ ..+..+++++ +++|+++.+|.........   .........++.+++++.|+.....    .
T Consensus       226 ~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~  305 (371)
T 3gqv_A          226 TYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEER  305 (371)
T ss_dssp             HHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHH
T ss_pred             HHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHH
Confidence            9998889999999998 6899999999 5999999998644211000   0111123456678888888754332    1


Q ss_pred             cchHHHHHHHHHHHHcCCcccccce--eeccccHHHHHHHhHcCCCcc-eEEEEeCC
Q 019042          293 HQYPKFLELVMPAIKEGKLVYVEDI--AEGLEKAPSALVGIFTGQNVG-KQLVVVAP  346 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~a~~~~~~~~~~g-kivi~~~~  346 (347)
                      +...+.++++++++++|++++....  .|+++++++||+.+.+++..| |+|+++++
T Consensus       306 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          306 QFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            1234456789999999999987544  479999999999999998887 77887765

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.2e-51  Score=369.61  Aligned_cols=305  Identities=18%  Similarity=0.235  Sum_probs=258.6

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCC-CCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCcee
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKV-PEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLS   82 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~-~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~   82 (347)
                      +++|||++++++  +.+    ++++  ++|.|. | ++ +||+|||.++|||++|++.+.|.+..  ...+|.++|||+ 
T Consensus        13 ~~~mka~~~~~~--g~~----l~~~--~~p~P~~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~-   81 (359)
T 1h2b_A           13 VERLKAARLHEY--NKP----LRIE--DVDYPRLE-GR-FDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHEN-   81 (359)
T ss_dssp             ----CEEEESST--TSC----CEEE--CCCCCCCB-TT-BCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCE-
T ss_pred             hhhceEEEEecC--CCC----cEEE--EccCCCCC-CC-CEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCc-
Confidence            678999999887  544    4554  577776 5 77 99999999999999999988874320  125689999995 


Q ss_pred             eceEEEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcc
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLS  132 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~  132 (347)
                       +|+|+++|++|++|++||+|+++                              |+|+||++++++. ++++ |++++..
T Consensus        82 -~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~i-P~~~~~~  158 (359)
T 1h2b_A           82 -VGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKDISRE  158 (359)
T ss_dssp             -EEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTTCCHH
T ss_pred             -eEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHh-EEEC-CCCCCHH
Confidence             55999999999999999999753                              7899999999999 9999 9995554


Q ss_pred             cccc---ccCCchhhHHHHhhhh-cCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCee
Q 019042          133 YYTG---ILGMPGLTAYGGLYEL-CSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDA  207 (347)
Q Consensus       133 ~~aa---~l~~~~~tA~~~l~~~-~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~v  207 (347)
                       ++|   ++++++.|||+++.+. +++++|++|||+|+ |++|++++|+|+++ |++|++++++++++++++ ++|++++
T Consensus       159 -~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v  235 (359)
T 1h2b_A          159 -KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHV  235 (359)
T ss_dssp             -HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEE
T ss_pred             -HHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCEE
Confidence             466   7889999999999765 79999999999998 99999999999999 999999999999999999 9999999


Q ss_pred             EecCChhhHHHHHHHHCCC-CccEEEECCCch---hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhcccee
Q 019042          208 FNYKKEPDLDAALKRCFPE-GIDIYFENVGGK---MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRM  283 (347)
Q Consensus       208 i~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                      +|+++  ++.+.+++++++ ++|++|||+|+.   .+..++++  ++|+++.+|....     +  ..+...++.+++++
T Consensus       236 i~~~~--~~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-----~--~~~~~~~~~~~~~i  304 (359)
T 1h2b_A          236 VDARR--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-----L--RFPTIRVISSEVSF  304 (359)
T ss_dssp             EETTS--CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-----C--CCCHHHHHHTTCEE
T ss_pred             Eeccc--hHHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-----C--CCCHHHHHhCCcEE
Confidence            99886  377788888877 899999999986   78888877  9999999987532     1  34555677899999


Q ss_pred             eeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          284 EGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       284 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .|+....     .+.++++++++++|++++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus       305 ~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          305 EGSLVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             EECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EEecCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            9876544     67899999999999999988 8999999999999999988889999974

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=7.5e-52  Score=372.16  Aligned_cols=310  Identities=18%  Similarity=0.184  Sum_probs=263.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  |.|+    .++..++|.|.| ++ +||+|||++++||++|++.+.|.......+|.++|||+  +|+|+
T Consensus         1 MkA~~~~~~--g~~~----~l~~~~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~--~G~V~   70 (324)
T 3nx4_A            1 MQALILEQQ--DGKT----LASVQHLEESQL-PA-GDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDF--AGTVH   70 (324)
T ss_dssp             CEEEEEEES--SSSE----EEEEEECCGGGS-CC-CSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEE--EEEEE
T ss_pred             CceEEEecC--CCCc----eeeEeecCCCCC-CC-CEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCcccccee--EEEEE
Confidence            699999999  8773    455566777866 77 99999999999999999998886644456799999995  45999


Q ss_pred             EecCCCCCCCCCCEEEe---------ccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhh--hcCCCC
Q 019042           89 VLDSTHPNYKKDDLVWG---------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYE--LCSPKK  157 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~---------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~  157 (347)
                      ++|  +++|++||+|++         .|+|+||++++++. ++++ |++++.. ++|+++..++|||.++..  ..++++
T Consensus        71 ~~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~  145 (324)
T 3nx4_A           71 ASE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDW-LVAL-PAGLSSR-NAMIIGTAGFTAMLCVMALEDAGIRP  145 (324)
T ss_dssp             EES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred             EeC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHH-cEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhhcccCC
Confidence            998  688999999995         38999999999999 9999 9995554 688999999999998863  345666


Q ss_pred             --CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          158 --GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       158 --~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                        |+ |||+|++|++|++++|+|++.|++|++++++++++++++ ++|+++++|+++. +.   +++++++++|++|||+
T Consensus       146 ~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~---~~~~~~~~~d~v~d~~  219 (324)
T 3nx4_A          146 QDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRILSRDEF-AE---SRPLEKQLWAGAIDTV  219 (324)
T ss_dssp             GGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEEEGGGS-SC---CCSSCCCCEEEEEESS
T ss_pred             CCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecCCH-HH---HHhhcCCCccEEEECC
Confidence              45 999999999999999999999999999999999999999 9999999998764 33   5555656899999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccc
Q 019042          236 GGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYV  314 (347)
Q Consensus       236 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~  314 (347)
                      |++.+..++++++++|+++.+|.....     ....+...++.+++++.|+....+ +....+.++++.+++++|++++.
T Consensus       220 g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  294 (324)
T 3nx4_A          220 GDKVLAKVLAQMNYGGCVAACGLAGGF-----ALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA  294 (324)
T ss_dssp             CHHHHHHHHHTEEEEEEEEECCCTTCS-----EEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred             CcHHHHHHHHHHhcCCEEEEEecCCCC-----CCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC
Confidence            999999999999999999999976432     123456677889999999875443 33445778999999999999987


Q ss_pred             cceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          315 EDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       315 ~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                       +++|+++++++||+.+.+++..||+|++++
T Consensus       295 -~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          295 -ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             -EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             -ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence             889999999999999999999999999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=8.1e-51  Score=371.13  Aligned_cols=310  Identities=17%  Similarity=0.193  Sum_probs=262.7

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            4 EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         4 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      .||++|||++++++  +     .++++  ++|.|.| ++ +||+|||.+++||++|++.+.|.+  ...+|.++|||  +
T Consensus        19 ~~p~~mkA~v~~~~--~-----~l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~--~~~~p~v~G~e--~   83 (370)
T 4ej6_A           19 YFQSMMKAVRLESV--G-----NISVR--NVGIPEP-GP-DDLLVKVEACGICGTDRHLLHGEF--PSTPPVTLGHE--F   83 (370)
T ss_dssp             --CCEEEEEEEEET--T-----EEEEE--EEECCCC-CT-TEEEEEEEEEECCHHHHHHHTTSS--CCCSSEECCCS--E
T ss_pred             ccchheEEEEEecC--C-----ceEEE--EccCCCC-CC-CeEEEEEEEEeecHHHHHHHcCCC--CCCCCeecCcc--e
Confidence            46788999999887  2     24554  4666766 77 999999999999999999988854  34668999999  5


Q ss_pred             ceEEEEecCCCCCCCCCCEEEe------------------------------ccCcceeEeecCCCcceeccCCCCCccc
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSY  133 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~  133 (347)
                      +|+|+++|+++++|++||+|++                              .|+|+||++++++. ++++ |+++  ++
T Consensus        84 ~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~~--~~  159 (370)
T 4ej6_A           84 CGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQ-AFEI-PLTL--DP  159 (370)
T ss_dssp             EEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTTS--CT
T ss_pred             EEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhh-EEEC-CCCC--CH
Confidence            5599999999999999999986                              37999999999999 9999 9994  44


Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      +.|+++.++.+||+++ +.+++++|++|||+|+ |++|++++|+|+++|+ +|++++++++++++++ ++|+++++|+++
T Consensus       160 ~~aal~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~  236 (370)
T 4ej6_A          160 VHGAFCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSA  236 (370)
T ss_dssp             TGGGGHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTS
T ss_pred             HHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEECCCC
Confidence            4455888999999999 6689999999999997 9999999999999999 9999999999999999 999999999988


Q ss_pred             hhhHHHHHHH---HCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEe
Q 019042          213 EPDLDAALKR---CFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLA  288 (347)
Q Consensus       213 ~~~~~~~i~~---~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  288 (347)
                      . ++.+.+++   ++++++|++|||+|. ..+..++++++++|+++.+|.....    .....+...++.+++++.|+..
T Consensus       237 ~-~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~  311 (370)
T 4ej6_A          237 G-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFDILFRELRVLGSFI  311 (370)
T ss_dssp             S-CHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHHHHHTTCEEEECCS
T ss_pred             c-CHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCC----CccccCHHHHHhCCcEEEEecc
Confidence            7 89899988   776799999999996 6899999999999999999975431    1234567778889999999865


Q ss_pred             cccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCC-CcceEEEEeCC
Q 019042          289 GDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQ-NVGKQLVVVAP  346 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkivi~~~~  346 (347)
                      ..      +.++++++++++|+++  +.++++|+++++++|++.+.+++ ..+|+++++++
T Consensus       312 ~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          312 NP------FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             CT------TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             Ch------HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence            43      3478999999999994  56889999999999999998877 45799888754

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=4.3e-50  Score=367.44  Aligned_cols=312  Identities=18%  Similarity=0.219  Sum_probs=262.8

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      +||+|||+++.++  +.+    +++++  +|.|.| ++ +||+|||.+++||++|++.+.|...  ..+|.++|||+  +
T Consensus         5 ~~~~mkA~~~~~~--g~~----l~~~~--~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~--~   70 (374)
T 2jhf_A            5 KVIKCKAAVLWEE--KKP----FSIEE--VEVAPP-KA-HEVRIKMVATGICRSDDHVVSGTLV--TPLPVIAGHEA--A   70 (374)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHHTSSC--CCSSBCCCCSE--E
T ss_pred             CceeEEEEEEecC--CCc----eEEEE--ccCCCC-CC-CeEEEEEeEEeechhhHHHHcCCCC--CCCCcccCcCc--e
Confidence            5789999999887  544    56655  566656 77 9999999999999999998887542  23799999995  5


Q ss_pred             eEEEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYS  113 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~  113 (347)
                      |+|+++|++|++|++||||++.                                                   |+|+||+
T Consensus        71 G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~  150 (374)
T 2jhf_A           71 GIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYT  150 (374)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEE
T ss_pred             EEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEE
Confidence            5999999999999999999852                                                   7899999


Q ss_pred             eecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH
Q 019042          114 LIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK  192 (347)
Q Consensus       114 ~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~  192 (347)
                      +++++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++
T Consensus       151 ~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~  226 (374)
T 2jhf_A          151 VVDEIS-VAKI-DAASPLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK  226 (374)
T ss_dssp             EEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             EEchHH-eEEC-CCCCCHH-HhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence            999999 9999 9995554 688899999999999877789999999999995 9999999999999999 899999999


Q ss_pred             HHHHHHHHHhCCCeeEecCC--hhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCc
Q 019042          193 EKVNLLKNKFGFDDAFNYKK--EPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPE  268 (347)
Q Consensus       193 ~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~  268 (347)
                      ++++.++ ++|+++++|+++  . ++.+.+++++++++|++|||+|. ..+..++++++++ |+++.+|.....    ..
T Consensus       227 ~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~  300 (374)
T 2jhf_A          227 DKFAKAK-EVGATECVNPQDYKK-PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS----QN  300 (374)
T ss_dssp             GGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTT----CC
T ss_pred             HHHHHHH-HhCCceEecccccch-hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCC----Cc
Confidence            9999999 999999999874  3 68888988887789999999997 6889999999999 999999875421    11


Q ss_pred             cccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          269 GVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ...+...++.++ ++.|+....+.  ..+.++++++++++|+++  +.++++|+++++++|++.+.+++. +|+||+|
T Consensus       301 ~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          301 LSMNPMLLLSGR-TWKGAIFGGFK--SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             EEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cccCHHHHhcCC-eEEEeccCCCC--hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            233455566677 88887654321  257899999999999987  467889999999999999988764 6999975

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-50  Score=364.60  Aligned_cols=315  Identities=18%  Similarity=0.168  Sum_probs=266.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  |.|  +.++++  ++|.|.| ++ +||+|||.+++||++|++...|.+. ...+|.++|||+  +|+|+
T Consensus         2 Mka~~~~~~--g~~--~~l~~~--~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~--~G~V~   70 (327)
T 1qor_A            2 ATRIEFHKH--GGP--EVLQAV--EFTPADP-AE-NEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEA--AGIVS   70 (327)
T ss_dssp             CEEEEBSSC--CSG--GGCEEE--ECCCCCC-CT-TEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCE--EEEEE
T ss_pred             cEEEEEcCC--CCh--hheEEe--ccCCCCC-CC-CEEEEEEEEEecCHHHHHHhCCCCC-CCCCCCCCCcee--EEEEE
Confidence            699999887  766  345555  4677766 77 9999999999999999998887542 234689999995  45999


Q ss_pred             EecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042           89 VLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                      ++|+++++|++||+|...    |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++|+|+
T Consensus        71 ~vG~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~  147 (327)
T 1qor_A           71 KVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFH  147 (327)
T ss_dssp             EECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEES
T ss_pred             EECCCCCCCCCCCEEEECCCCCceeeeEEEecHHH-cEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEE
Confidence            999999999999999643    8999999999999 9999 9995554 5789999999999999877899999999999


Q ss_pred             cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHH
Q 019042          165 AASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAV  243 (347)
Q Consensus       165 ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~  243 (347)
                      ||+|++|++++|+++..|++|+++++++++++.++ ++|++.++|+++. ++.+.+.+.+.+ ++|++|||+|.+.+..+
T Consensus       148 Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~  225 (327)
T 1qor_A          148 AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERS  225 (327)
T ss_dssp             STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHH
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECCchHHHHHH
Confidence            99999999999999999999999999999999998 8999999998876 888888888866 89999999998899999


Q ss_pred             HHhhccCCEEEEEcccccccCCCCccccchHHHHhc-cceeeeeEeccc---ccchHHHHHHHHHHHHcCCcccccc--e
Q 019042          244 LLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGK-RIRMEGFLAGDF---YHQYPKFLELVMPAIKEGKLVYVED--I  317 (347)
Q Consensus       244 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~--~  317 (347)
                      +++++++|+++.+|...+.     ....+...++.+ ++++.+.....+   +....+.++++++++++|++++.++  +
T Consensus       226 ~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  300 (327)
T 1qor_A          226 LDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQ  300 (327)
T ss_dssp             HHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGG
T ss_pred             HHHhcCCCEEEEEecCCCC-----CCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCc
Confidence            9999999999999975432     122445556666 777765543222   2224677899999999999999888  8


Q ss_pred             eeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          318 AEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       318 ~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +|+++++++|++.+.+++..||+|+++
T Consensus       301 ~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          301 KYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             EEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             EEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999999999999988899999864

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=4.2e-50  Score=367.51  Aligned_cols=314  Identities=21%  Similarity=0.250  Sum_probs=263.9

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            4 EEAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         4 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      ..||+|||+++.++  +.+    +++++  +|.|.| ++ +||+|||+++|||++|++.+.|... ...+|.++|||+  
T Consensus         2 ~~p~~mkA~~~~~~--~~~----l~~~~--~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~--   68 (373)
T 2fzw_A            2 NEVIKCKAAVAWEA--GKP----LSIEE--IEVAPP-KA-HEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLG--   68 (373)
T ss_dssp             CCCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCEE--
T ss_pred             CCccceEEEEEecC--CCC----cEEEE--eeCCCC-CC-CEEEEEEEEEEEchhhHHHhcCCCC-CCCCCccccccc--
Confidence            35789999999887  544    56655  556655 77 9999999999999999998887542 235699999995  


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec---------------------------------------------------cCccee
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEY  112 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~  112 (347)
                      +|+|+++|++|++|++||||++.                                                   |+|+||
T Consensus        69 ~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey  148 (373)
T 2fzw_A           69 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEY  148 (373)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSE
T ss_pred             cEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeE
Confidence            45999999999999999999853                                                   789999


Q ss_pred             EeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC
Q 019042          113 SLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGS  191 (347)
Q Consensus       113 ~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~  191 (347)
                      ++++++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|++++++
T Consensus       149 ~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~  224 (373)
T 2fzw_A          149 TVVADIS-VAKI-DPLAPLD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN  224 (373)
T ss_dssp             EEEEGGG-EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC
T ss_pred             EEEchhh-eEEC-CCCCCHH-HHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            9999999 9999 9995554 688899999999999877789999999999995 9999999999999999 89999999


Q ss_pred             HHHHHHHHHHhCCCeeEecCC--hhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCC
Q 019042          192 KEKVNLLKNKFGFDDAFNYKK--EPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKP  267 (347)
Q Consensus       192 ~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~  267 (347)
                      ++++++++ ++|+++++|+++  . ++.+.+++++++++|++|||+|. ..+..++++++++ |+++.+|.....    .
T Consensus       225 ~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~  298 (373)
T 2fzw_A          225 KDKFARAK-EFGATECINPQDFSK-PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG----E  298 (373)
T ss_dssp             GGGHHHHH-HHTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----C
T ss_pred             HHHHHHHH-HcCCceEeccccccc-cHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCC----c
Confidence            99999999 999999999874  3 68888998887789999999998 6889999999999 999999875421    1


Q ss_pred             ccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          268 EGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       268 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ....+...++.++ ++.|+....+  ...+.++++++++++|+++  +.++++|+++++++||+.+.+++. +|+||++
T Consensus       299 ~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          299 EIATRPFQLVTGR-TWKGTAFGGW--KSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             CEEECTHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             eeeeCHHHHhcCC-EEEEeccCCC--CcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            1233445566677 8888765432  1257899999999999987  567889999999999999988775 6999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=6.7e-50  Score=361.27  Aligned_cols=306  Identities=21%  Similarity=0.223  Sum_probs=263.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +.+    ++++  ++|.|.| ++ +||+|||.++|||++|++.+.|.+.....+|.++|||+  +|+|+
T Consensus         1 Mka~~~~~~--g~~----l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~--~G~V~   68 (339)
T 1rjw_A            1 MKAAVVEQF--KEP----LKIK--EVEKPTI-SY-GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEG--VGIVE   68 (339)
T ss_dssp             CEEEEBSST--TSC----CEEE--ECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCE--EEEEE
T ss_pred             CeEEEEcCC--CCC----cEEE--EeeCCCC-CC-CEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccc--eEEEE
Confidence            689999887  544    4554  5777766 77 99999999999999999888775432345699999995  45999


Q ss_pred             EecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      ++|++|++|++||+|+.                               .|+|+||++++++. ++++ |++++.. ++|+
T Consensus        69 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~  145 (339)
T 1rjw_A           69 EVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDNLSFE-EAAP  145 (339)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTTSCHH-HHGG
T ss_pred             EECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHH-EEEC-CCCCCHH-Hhhh
Confidence            99999999999999974                               27899999999999 9999 9995554 5889


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +++++.|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++. ++.
T Consensus       146 l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~d~~~~-~~~  221 (339)
T 1rjw_A          146 IFCAGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE-DAA  221 (339)
T ss_dssp             GGTHHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS-CHH
T ss_pred             hhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEecCCCc-cHH
Confidence            99999999999966 48999999999998 88999999999999999999999999999999 8999999998876 888


Q ss_pred             HHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchH
Q 019042          218 AALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP  296 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  296 (347)
                      +.+.+.+ +++|++||++|. ..+..++++++++|+++.+|.....      ...+...++.+++++.|+....     .
T Consensus       222 ~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~  289 (339)
T 1rjw_A          222 KFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE------MPIPIFDTVLNGIKIIGSIVGT-----R  289 (339)
T ss_dssp             HHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE------EEEEHHHHHHTTCEEEECCSCC-----H
T ss_pred             HHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC------CccCHHHHHhCCcEEEEeccCC-----H
Confidence            8888777 579999999998 7899999999999999999875421      2345566778999999876544     5


Q ss_pred             HHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          297 KFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       297 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      +.++++++++++|++++. .++|+++++++|++.+.+++..||+|+++++
T Consensus       290 ~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          290 KDLQEALQFAAEGKVKTI-IEVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             HHHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHHHHHHHcCCCCcc-EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            789999999999999886 4689999999999999998888999999876

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-50  Score=364.09  Aligned_cols=313  Identities=20%  Similarity=0.212  Sum_probs=266.4

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ||.+|||++++++  +.+    +++++  +|.|.| ++ +||+|||+++|||++|++.+.|.+.....+|.++|||+  +
T Consensus         2 ~p~~mka~~~~~~--g~~----l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~--~   69 (347)
T 2hcy_A            2 IPETQKGVIFYES--HGK----LEYKD--IPVPKP-KA-NELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEG--A   69 (347)
T ss_dssp             CCSEEEEEEESST--TCC----CEEEE--EECCCC-CT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEE--E
T ss_pred             CCcccEEEEEeCC--CCC----CEEEE--eeCCCC-CC-CEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccc--e
Confidence            6788999999887  543    56654  666766 77 99999999999999999888875432345689999995  4


Q ss_pred             eEEEEecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCccc
Q 019042           85 GVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPLSY  133 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~  133 (347)
                      |+|+++|++|++|++||||++                               .|+|+||++++++. ++++ |++++.. 
T Consensus        70 G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-  146 (347)
T 2hcy_A           70 GVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQ-AAHI-PQGTDLA-  146 (347)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTT-SEEE-CTTCCHH-
T ss_pred             EEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEecccc-EEEC-CCCCCHH-
Confidence            599999999999999999974                               27899999999999 9999 9995554 


Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      ++|++++.++|||+++.+ .++++|++|||+|++|++|++++|+++..|++|+++++++++++.++ ++|++.++|+.+.
T Consensus       147 ~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~  224 (347)
T 2hcy_A          147 QVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFIDFTKE  224 (347)
T ss_dssp             HHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCCEEEETTTC
T ss_pred             HHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCceEEecCcc
Confidence            588999999999999965 58999999999999999999999999999999999999999989998 8999988998732


Q ss_pred             hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccc
Q 019042          214 PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY  292 (347)
Q Consensus       214 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  292 (347)
                      +++.+.+.+.+.+++|++||++|. ..+..++++++++|+++.+|...+.     ....+...++.+++++.|+....  
T Consensus       225 ~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~--  297 (347)
T 2hcy_A          225 KDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGA-----KCCSDVFNQVVKSISIVGSYVGN--  297 (347)
T ss_dssp             SCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTC-----EEEEEHHHHHHTTCEEEECCCCC--
T ss_pred             HhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCC-----CCCCCHHHHhhCCcEEEEccCCC--
Confidence            278888888775589999999998 7889999999999999999875421     12345566778999999876554  


Q ss_pred             cchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          293 HQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                         .+.++++++++++|++++. .++|+++++++||+.+.+++..||+|++++
T Consensus       298 ---~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          298 ---RADTREALDFFARGLVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             ---HHHHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             ---HHHHHHHHHHHHhCCCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence               5789999999999999986 468999999999999999888899999876

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.3e-50  Score=367.41  Aligned_cols=309  Identities=19%  Similarity=0.195  Sum_probs=258.5

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccC-CCC-CCcccCCCCCCcee
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSK-LDK-PSFVASFNPGEPLS   82 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~-~~~-~~~~~p~v~G~e~~   82 (347)
                      ||++|||++++++  +.    .+++++  +|.|.| ++ +||+|||.+++||++|++.+.| .+. ....+|.++|||+ 
T Consensus         1 ~m~~mka~~~~~~--g~----~l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~-   69 (348)
T 2d8a_A            1 MSEKMVAIMKTKP--GY----GAELVE--VDVPKP-GP-GEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEV-   69 (348)
T ss_dssp             --CEEEEEEECSS--SS----SCEEEE--EECCCC-CT-TEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEE-
T ss_pred             CCCcceEEEEECC--CC----CEEEEE--CCCCCC-Cc-CEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccc-
Confidence            6788999999887  42    255554  666766 77 9999999999999999998877 221 1135689999994 


Q ss_pred             eceEEEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcc
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLS  132 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~  132 (347)
                       +|+|+++|++|++|++||||++.                              |+|+||++++++. ++++ |++++..
T Consensus        70 -~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~  146 (348)
T 2d8a_A           70 -AGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQN-IWKN-PKSIPPE  146 (348)
T ss_dssp             -EEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGG-EEEC-CTTSCHH
T ss_pred             -eEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHH-eEEC-CCCCCHH
Confidence             55999999999999999999864                              7899999999999 9999 9995443


Q ss_pred             ccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          133 YYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       133 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                       ++|++ .++.|||+++ +..++ +|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++ ++|+++++|++
T Consensus       147 -~aa~~-~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~  220 (348)
T 2d8a_A          147 -YATLQ-EPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPF  220 (348)
T ss_dssp             -HHTTH-HHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEEECTT
T ss_pred             -HHHhh-hHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCC
Confidence             45555 5888999999 56788 9999999998 9999999999999999 9999999999999999 99999999998


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccch-HHHHhccceeeeeEe
Q 019042          212 KEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL-MQVVGKRIRMEGFLA  288 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~  288 (347)
                      +. ++.+.+.+++++ ++|++|||+|. ..+..++++++++|+++.+|.....      ...+. ..++.+++++.|+..
T Consensus       221 ~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~~i~g~~~  293 (348)
T 2d8a_A          221 EE-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK------VTIDFNNLIIFKALTIYGITG  293 (348)
T ss_dssp             TS-CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHTTTTTCEEEECCC
T ss_pred             Cc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------cccCchHHHHhCCcEEEEecC
Confidence            76 889999999877 89999999998 7889999999999999999875421      23344 567788999988754


Q ss_pred             cccccchHHHHHHHHHHHHcCCc--ccccceeec-cccHHHHHHHhHcCCCcceEEEEeC
Q 019042          289 GDFYHQYPKFLELVMPAIKEGKL--VYVEDIAEG-LEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~-~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      ..    ..+.++++++++++|++  ++.++++|+ ++++++|++.+.+ ...||+|++++
T Consensus       294 ~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          294 RH----LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             CC----SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             CC----cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            32    15778999999999995  577888999 9999999999977 56899999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-50  Score=367.28  Aligned_cols=311  Identities=18%  Similarity=0.214  Sum_probs=262.5

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccc-cccCCCCCCcccCCCCCCceee
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRG-RMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~-~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      .||+|||+++.++  +.|    +++++  +|.|.| ++ +||+|||.+++||++|++ .+.|...  ..+|.++|||  +
T Consensus         5 ~~~~mka~~~~~~--~~~----l~~~~--~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE--~   70 (374)
T 1cdo_A            5 KVIKCKAAVAWEA--NKP----LVIEE--IEVDVP-HA-NEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHE--G   70 (374)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCC--E
T ss_pred             CcceeEEEEEecC--CCC----eEEEE--eeCCCC-CC-CEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCcc--c
Confidence            4788999999887  554    46654  566656 77 999999999999999998 7777432  4568999999  4


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec---------------------------------------------------cCccee
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEY  112 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~  112 (347)
                      +|+|+++|++|++|++||||++.                                                   |+|+||
T Consensus        71 ~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey  150 (374)
T 1cdo_A           71 AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY  150 (374)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSE
T ss_pred             eEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeE
Confidence            55999999999999999999853                                                   789999


Q ss_pred             EeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC
Q 019042          113 SLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGS  191 (347)
Q Consensus       113 ~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~  191 (347)
                      ++++++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|++++++
T Consensus       151 ~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~  226 (374)
T 1cdo_A          151 TVVNQIA-VAKI-DPSAPLD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLN  226 (374)
T ss_dssp             EEEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred             EEEchhh-eEEC-CCCCCHH-HHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            9999999 9999 9996554 688899999999999877789999999999995 9999999999999999 89999999


Q ss_pred             HHHHHHHHHHhCCCeeEecCC--hhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCC
Q 019042          192 KEKVNLLKNKFGFDDAFNYKK--EPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKP  267 (347)
Q Consensus       192 ~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~  267 (347)
                      ++++++++ ++|+++++|+++  . ++.+.+++.+++++|++||++|. ..+..++++++++ |+++.+|.....     
T Consensus       227 ~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~-----  299 (374)
T 1cdo_A          227 PDKFEKAK-VFGATDFVNPNDHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-----  299 (374)
T ss_dssp             GGGHHHHH-HTTCCEEECGGGCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSS-----
T ss_pred             HHHHHHHH-HhCCceEEeccccch-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCC-----
Confidence            99999999 999999999874  3 68888888887789999999997 6889999999999 999999875421     


Q ss_pred             ccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          268 EGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       268 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ....+...++.++ ++.|+....+.  ..+.++++++++++|+++  +.++++|+++++++||+.+.+++. +|+||+|
T Consensus       300 ~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          300 DVATRPIQLIAGR-TWKGSMFGGFK--GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             CEEECHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CcccCHHHHhcCC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            1223445566677 88887654321  257899999999999987  567889999999999999988775 6999975

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=6.8e-50  Score=362.70  Aligned_cols=310  Identities=18%  Similarity=0.149  Sum_probs=256.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  |     .  ++..|+|.|++++| +||||||+++|||++|++.+.+..  ...+|+++|||++  |+|+
T Consensus         1 MkAvv~~~~--g-----~--l~v~e~p~P~~~~~-~eVlVkv~a~gi~~sD~~~~~g~~--~~~~P~i~G~E~~--G~V~   66 (346)
T 4a2c_A            1 MKSVVNDTD--G-----I--VRVAESVIPEIKHQ-DEVRVKIASSGLCGSDLPRIFKNG--AHYYPITLGHEFS--GYID   66 (346)
T ss_dssp             CEEEEECSS--S-----C--EEEEECCCCCCCST-TEEEEEEEEEECCTTHHHHHHSSC--SSSSSBCCCCEEE--EEEE
T ss_pred             CCEEEEecC--C-----C--EEEEEEeCCCCCCc-CEEEEEEEEEEECHHHHHHHcCCC--CCCCCccccEEEE--EEEE
Confidence            799999876  3     2  44455788875477 999999999999999998887743  3567999999954  5999


Q ss_pred             EecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGIL  138 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l  138 (347)
                      ++|++|+++++||+|++.                              |+|+||++++++. ++++ |++++.. ++|.+
T Consensus        67 ~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~aa~l  143 (346)
T 4a2c_A           67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKN-VFAL-PTDMPIE-DGAFI  143 (346)
T ss_dssp             EECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGG-EEEC-CTTSCGG-GGGGH
T ss_pred             EECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchhe-EEEC-CCCCCHH-HHHhc
Confidence            999999999999999752                              7899999999999 9999 9995543 34444


Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                       ....++++++ ...++++|++|+|+|+ |++|++++|+|+++|+ .+++++++++|+++++ ++|+++++|+++. ++.
T Consensus       144 -~~~~~~~~~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~-~~~  218 (346)
T 4a2c_A          144 -EPITVGLHAF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM-SAP  218 (346)
T ss_dssp             -HHHHHHHHHH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHH
T ss_pred             -hHHHHHHHHH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCeEEEeCCCC-CHH
Confidence             4445555555 6689999999999996 9999999999999999 5678888999999999 9999999999987 888


Q ss_pred             HHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccch
Q 019042          218 AALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQY  295 (347)
Q Consensus       218 ~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  295 (347)
                      +.++.++++ ++|+++|++|. ..++.++++++++|+++.+|.....   ......+...++.|++++.|+.........
T Consensus       219 ~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~  295 (346)
T 4a2c_A          219 QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQD---LHLTSATFGKILRKELTVIGSWMNYSSPWP  295 (346)
T ss_dssp             HHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSC---EEECHHHHHHHHHHTCEEEECCTTCCSSTT
T ss_pred             HHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCC---ccccccCHHHHhhceeEEEEEeccccCcch
Confidence            888888876 89999999997 6889999999999999999975432   111233455677899999998654433333


Q ss_pred             HHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEE
Q 019042          296 PKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  343 (347)
Q Consensus       296 ~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~  343 (347)
                      .+.++++++++++|+++  +.++++|+|+++++|++.+.+++..||+||+
T Consensus       296 ~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          296 GQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             CHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEE
Confidence            57799999999999885  5688999999999999999999999999986

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.8e-49  Score=359.70  Aligned_cols=338  Identities=67%  Similarity=1.180  Sum_probs=273.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCC---cccCCCCCCce
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPS---FVASFNPGEPL   81 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~---~~~p~v~G~e~   81 (347)
                      |+++||+++++....++|+...+++++.++|.|.|+++ +||||||.++|+|+.|+. ..+.....   ..+|+++|||+
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~-~eVlVkv~a~g~~~~~~~-~~g~~~~~~~~~~~p~v~G~e~   78 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMRI-RMGKPDPSTAALAQAYTPGQPI   78 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSS-SCEEEEECEEECCTTHHH-HHBC---------CCCCTTSBC
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCC-CEEEEEEEEecCCHHHHh-hcccCCCCccccCCCcCCCCee
Confidence            67789999999886566631157777445666653477 999999999999998753 33322111   24689999996


Q ss_pred             eeceEEEE--ecCCCCCCCCCCEEEeccCcceeEeecCCC-cceeccCC-CCCccccccccCCchhhHHHHhhhhcCCCC
Q 019042           82 SGYGVSKV--LDSTHPNYKKDDLVWGLTSWEEYSLIQSPQ-HLIKILDT-NVPLSYYTGILGMPGLTAYGGLYELCSPKK  157 (347)
Q Consensus        82 ~g~G~v~~--vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~-~~~~i~P~-~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  157 (347)
                      +|  ++.+  ||+++++|++||+|+++|+|+||++++++. .++++ |+ ++++++++|+++++++|||+++.+.+++++
T Consensus        79 ~G--~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~  155 (345)
T 2j3h_A           79 QG--YGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKE  155 (345)
T ss_dssp             EE--EEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCT
T ss_pred             ec--ceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeec-CCCCCCHHHHHHhccccHHHHHHHHHHHhCCCC
Confidence            55  7777  999999999999999999999999998654 38899 85 545665678999999999999977789999


Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      |++|||+|++|++|++++|+++..|++|+++++++++++.+++++|+++++|+.+.+++.+.+.+.+++++|++|||+|.
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~  235 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGG  235 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCH
Confidence            99999999999999999999999999999999999999988746999989998753267778888776689999999999


Q ss_pred             hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccce
Q 019042          238 KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDI  317 (347)
Q Consensus       238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  317 (347)
                      ..+..++++++++|+++.+|.....+........+...++.+++++.|+....+.....+.++++++++++|++++.++.
T Consensus       236 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~  315 (345)
T 2j3h_A          236 KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV  315 (345)
T ss_dssp             HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred             HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccc
Confidence            88999999999999999998765321111112334556777899999876655444556789999999999999988888


Q ss_pred             eeccccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          318 AEGLEKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       318 ~~~~~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      +|+++++++||+.+.+++..||+|+.++++
T Consensus       316 ~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             EESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             cCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence            899999999999999999999999998764

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=4.1e-50  Score=366.24  Aligned_cols=312  Identities=14%  Similarity=0.071  Sum_probs=257.9

Q ss_pred             CccccccccceEEEeeccCCCCCCCCeEEEeecccCC--------CCCCCCCeEEEEEEEeecChhccccccCCC--CCC
Q 019042            1 MAGEEAVSNKQVILSNYVTGFPKESDMKIITGSINLK--------VPEGSKDTVLLKNLYLSCDPYMRGRMSKLD--KPS   70 (347)
Q Consensus         1 ~~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p--------~~~~~~~evlikv~~~~i~~~d~~~~~~~~--~~~   70 (347)
                      |+..|+++|||+++..+       +.++++  ++|.|        .| ++ +||||||+++|||++|++.+.+..  ...
T Consensus         1 m~~~~~~~mka~~~~~~-------~~l~~~--~~~~P~~~~~~~~~~-~~-~eVlVkv~a~gi~~~D~~~~~~~~~~~~~   69 (363)
T 3m6i_A            1 MASSASKTNIGVFTNPQ-------HDLWIS--EASPSLESVQKGEEL-KE-GEVTVAVRSTGICGSDVHFWKHGCIGPMI   69 (363)
T ss_dssp             ----CCSCCEEEEECTT-------CCEEEE--ECSSCHHHHHHTCSC-CT-TEEEEEEEEEECCHHHHHHHHHSBSSSCB
T ss_pred             CCCCCcccceeEEEeCC-------CcEEEE--EecCCccccccCCCc-CC-CeEEEEEeEEeecHhhHHHHcCCCCCCcc
Confidence            77778999999999654       335555  46777        66 77 999999999999999998776322  112


Q ss_pred             cccCCCCCCceeeceEEEEecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCC
Q 019042           71 FVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQ  119 (347)
Q Consensus        71 ~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~  119 (347)
                      ..+|.++|||  ++|+|+++|++|++|++||||++                               .|+|+||++++++.
T Consensus        70 ~~~p~v~G~E--~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~  147 (363)
T 3m6i_A           70 VECDHVLGHE--SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVW  147 (363)
T ss_dssp             CCSCEECCCE--EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGG
T ss_pred             CCCCcccCcc--eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhh
Confidence            3568999999  55699999999999999999985                               37899999999999


Q ss_pred             cceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHH
Q 019042          120 HLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLL  198 (347)
Q Consensus       120 ~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~  198 (347)
                       ++++ |+ ++.. ++|.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |+++++++++++++
T Consensus       148 -~~~i-P~-~s~~-~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  220 (363)
T 3m6i_A          148 -CHKI-GN-MSYE-NGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA  220 (363)
T ss_dssp             -EEEC-TT-CCHH-HHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred             -EEEC-CC-CCHH-HHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence             9999 99 7665 45555 6889999999 6689999999999997 99999999999999996 99999999999999


Q ss_pred             HHHhCCCeeEecC----ChhhHHHHHHHHCCC-CccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccc
Q 019042          199 KNKFGFDDAFNYK----KEPDLDAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHN  272 (347)
Q Consensus       199 ~~~~g~~~vi~~~----~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  272 (347)
                      + ++ +++++++.    +..++.+.+++.+++ ++|++|||+|+. .+..++++++++|+++.+|.....      ...+
T Consensus       221 ~-~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~  292 (363)
T 3m6i_A          221 K-EI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNE------IQIP  292 (363)
T ss_dssp             H-HH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSC------CCCC
T ss_pred             H-Hh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCC------cccc
Confidence            9 88 76666654    223788999999977 999999999985 889999999999999999875321      2345


Q ss_pred             hHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCc--ccccceeeccccHHHHHHHhHcC-CCcceEEEEeCC
Q 019042          273 LMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL--VYVEDIAEGLEKAPSALVGIFTG-QNVGKQLVVVAP  346 (347)
Q Consensus       273 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~-~~~gkivi~~~~  346 (347)
                      ...++.+++++.++...      .+.++++++++++|++  ++.++++|+++++++||+.+.++ ...+|+||++++
T Consensus       293 ~~~~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          293 FMRASVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             HHHHHHHTCEEEECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             HHHHHhcCcEEEEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            66778889999887643      3568889999999999  56688999999999999999988 578899999864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.9e-50  Score=378.09  Aligned_cols=320  Identities=19%  Similarity=0.151  Sum_probs=266.2

Q ss_pred             cccccccceEEEeeccCC----------CCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhcccccc--------
Q 019042            3 GEEAVSNKQVILSNYVTG----------FPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMS--------   64 (347)
Q Consensus         3 ~~~~~~~~a~~~~~~~~~----------~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~--------   64 (347)
                      ..+|.+|||+++.++  +          .|. +.+++++  +|.|.| ++ +||+|||+++|||++|++...        
T Consensus        19 ~~~p~tmkA~v~~~~--~~~~~~~~~~~~~~-~~l~~~e--~p~P~~-~~-~eVlVrV~a~gic~sD~~~~~~~~~~~~~   91 (447)
T 4a0s_A           19 APVPDTYLALHLRAE--DADMFKGVADKDVR-KSLRLGE--VPMPEL-AP-DEVLVAVMASSINYNTVWSAMFEPIPTFH   91 (447)
T ss_dssp             SCCCSEEEEEEEEGG--GTTTTTTCSSCCHH-HHCEEEE--EECCCC-CT-TEEEEEEEEEECCHHHHHHHTTCSSCHHH
T ss_pred             cCCChhheeeeeecc--ccccccccccCCCC-CCceEEe--ccCCCC-CC-CeEEEEEEEEEECcHHhhhhccCcccchh
Confidence            457889999999998  4          111 2355554  666766 77 999999999999999974321        


Q ss_pred             --------CCCCCCcccC-CCCCCceeeceEEEEecCCCCCCCCCCEEEe------------------------------
Q 019042           65 --------KLDKPSFVAS-FNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG------------------------------  105 (347)
Q Consensus        65 --------~~~~~~~~~p-~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~------------------------------  105 (347)
                              +.+.....+| .++|||+  +|+|+++|++|++|++||+|++                              
T Consensus        92 ~~~~~~~~g~~~~~~~~P~~v~GhE~--~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~  169 (447)
T 4a0s_A           92 FLKQNARQGGWATRHDQPYHVLGSDC--SGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETN  169 (447)
T ss_dssp             HHHHHHTTCGGGGGGCCSEEECCSCE--EEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSS
T ss_pred             hhhhhcccCccccccCCCCcccccce--eEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCC
Confidence                    1111112345 6999995  4599999999999999999986                              


Q ss_pred             ccCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhh--cCCCCCCEEEEEcCCChHHHHHHHHHHHCCC
Q 019042          106 LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYEL--CSPKKGEYVYVSAASGAVGQLVGQFAKLVGC  183 (347)
Q Consensus       106 ~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~  183 (347)
                      .|+|+||++++++. ++++ |++++.. ++|+++..++|||+++...  +++++|++|||+|++|++|++++|+|++.|+
T Consensus       170 ~G~~aey~~v~~~~-~~~i-P~~ls~~-~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga  246 (447)
T 4a0s_A          170 FGGLAEYGVVRASQ-LLPK-PAHLTWE-EAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG  246 (447)
T ss_dssp             SCSSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred             CCceeeeeecCHHH-cEEC-CCCCCHH-HHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence            48999999999999 9999 9995554 5788888999999999643  8999999999999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHhCCCeeEecCChhh------------------HHHHHHHHCCCCccEEEECCCchhHHHHHH
Q 019042          184 YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD------------------LDAALKRCFPEGIDIYFENVGGKMLDAVLL  245 (347)
Q Consensus       184 ~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~------------------~~~~i~~~~~~~~d~vid~~g~~~~~~~~~  245 (347)
                      +|+++++++++++.++ ++|+++++|+.+. +                  +.+.+++.+++++|++|||+|...+..+++
T Consensus       247 ~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~  324 (447)
T 4a0s_A          247 IPVAVVSSAQKEAAVR-ALGCDLVINRAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVI  324 (447)
T ss_dssp             EEEEEESSHHHHHHHH-HTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHH
T ss_pred             EEEEEeCCHHHHHHHH-hcCCCEEEecccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHH
Confidence            9999999999999998 9999999987643 3                  367788878448999999999989999999


Q ss_pred             hhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHH
Q 019042          246 NMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAP  325 (347)
Q Consensus       246 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  325 (347)
                      +++++|+++.+|...+.     ....+...++.+++++.|+....     .+.+.++++++++|++++.++++|++++++
T Consensus       325 ~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~  394 (447)
T 4a0s_A          325 VARRGGTVVTCGSSSGY-----LHTFDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAA  394 (447)
T ss_dssp             HSCTTCEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHH
T ss_pred             HHhcCCEEEEEecCCCc-----ccccCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHH
Confidence            99999999999975431     22345667778889999887655     466788999999999999999999999999


Q ss_pred             HHHHHhHcCCCcceEEEEeCC
Q 019042          326 SALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       326 ~a~~~~~~~~~~gkivi~~~~  346 (347)
                      +||+.+.+++..||+||.+.+
T Consensus       395 ~A~~~~~~~~~~GKvvv~~~~  415 (447)
T 4a0s_A          395 EACRVVQTSRQVGKVAVLCMA  415 (447)
T ss_dssp             HHHHHHHTTCCSSEEEEESSC
T ss_pred             HHHHHHhcCCCceEEEEEeCC
Confidence            999999999999999998854

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=1.5e-50  Score=379.17  Aligned_cols=321  Identities=18%  Similarity=0.167  Sum_probs=267.2

Q ss_pred             ccccccceEEEeeccC----------CCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC-----
Q 019042            4 EEAVSNKQVILSNYVT----------GFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK-----   68 (347)
Q Consensus         4 ~~~~~~~a~~~~~~~~----------~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~-----   68 (347)
                      .+|.+|||+++.++..          +.|. +.++++  ++|.|.| ++ +||||||.++|||++|++...+...     
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~-~~l~~~--e~p~P~~-~~-~eVlVkV~a~gic~sD~~~~~~~~~~~~~~  100 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPR-KSIHLD--DVPVPEL-GP-GEALVAVMASSVNYNSVHTSIFEPLSTFGF  100 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHH-HHCEEE--EECCCCC-CT-TEEEEEEEEEEECHHHHHHHTTCSSCSHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCC-CCcEEE--EccCCCC-CC-CeEEEEEEEEEecchhhhhhhcCcccchhh
Confidence            3578999999998611          1111 234554  4667766 77 9999999999999999765332100     


Q ss_pred             -----------CCcccC-CCCCCceeeceEEEEecCCCCCCCCCCEEEe------------------------------c
Q 019042           69 -----------PSFVAS-FNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG------------------------------L  106 (347)
Q Consensus        69 -----------~~~~~p-~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~------------------------------~  106 (347)
                                 ....+| .++|||  ++|+|+++|++|++|++||+|++                              .
T Consensus       101 ~~~~g~~~~~~~~~~~P~~v~GhE--~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~  178 (456)
T 3krt_A          101 LERYGRVSDLAKRHDLPYHVIGSD--LAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNF  178 (456)
T ss_dssp             HHHHHTSCHHHHTTCCSEEECCSC--CEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSS
T ss_pred             hhhccccccccccCCCCcccccce--eEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCC
Confidence                       012345 699999  55699999999999999999986                              3


Q ss_pred             cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhh--cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE
Q 019042          107 TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYEL--CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCY  184 (347)
Q Consensus       107 g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~  184 (347)
                      |+|+||++++++. ++++ |++++.. ++|+++..+.|||+++...  +++++|++|+|+|++|++|++++|+|+..|++
T Consensus       179 G~~aey~~v~~~~-~~~~-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~  255 (456)
T 3krt_A          179 GGLAEIALVKSNQ-LMPK-PDHLSWE-EAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGAN  255 (456)
T ss_dssp             CSSBSEEEEEGGG-EEEC-CTTSCHH-HHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE
T ss_pred             CcccceEEechHH-eeEC-CCCCCHH-HHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe
Confidence            8999999999999 9999 9995554 5778888999999999654  78999999999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHhCCCeeEecCChhh-----------------HHHHHHHHCCC-CccEEEECCCchhHHHHHHh
Q 019042          185 VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD-----------------LDAALKRCFPE-GIDIYFENVGGKMLDAVLLN  246 (347)
Q Consensus       185 V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-----------------~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~  246 (347)
                      |++++++++++++++ ++|+++++|+.+. +                 +.+.+++++++ ++|++|||+|++.+..++++
T Consensus       256 vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~  333 (456)
T 3krt_A          256 PICVVSSPQKAEICR-AMGAEAIIDRNAE-GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFV  333 (456)
T ss_dssp             EEEEESSHHHHHHHH-HHTCCEEEETTTT-TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHH
T ss_pred             EEEEECCHHHHHHHH-hhCCcEEEecCcC-cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHH
Confidence            999999999999999 9999999998764 3                 34788888887 99999999999999999999


Q ss_pred             hccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHH
Q 019042          247 MRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPS  326 (347)
Q Consensus       247 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  326 (347)
                      ++++|+++.+|...+.     ....+...++.+++++.|+....     .+.+.++++++++|++++.++++|+|+++++
T Consensus       334 l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~e  403 (456)
T 3krt_A          334 TRKGGTITTCASTSGY-----MHEYDNRYLWMSLKRIIGSHFAN-----YREAWEANRLIAKGRIHPTLSKVYSLEDTGQ  403 (456)
T ss_dssp             EEEEEEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHH
T ss_pred             hhCCcEEEEEecCCCc-----ccccCHHHHHhcCeEEEEeccCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHH
Confidence            9999999999976432     22345667778889999887665     3556789999999999999999999999999


Q ss_pred             HHHHhHcCCCcceEEEEeCC
Q 019042          327 ALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       327 a~~~~~~~~~~gkivi~~~~  346 (347)
                      |++.+.+++..||+||.+.+
T Consensus       404 A~~~l~~~~~~GKvvv~~~~  423 (456)
T 3krt_A          404 AAYDVHRNLHQGKVGVLCLA  423 (456)
T ss_dssp             HHHHHHTTCSSSEEEEESSC
T ss_pred             HHHHHHhCCCCCcEEEEeCC
Confidence            99999999999999998854

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=2e-49  Score=360.47  Aligned_cols=309  Identities=17%  Similarity=0.140  Sum_probs=256.7

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCcee
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLS   82 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~   82 (347)
                      -+|+|||+++.++       ..+++  .++|.|.| ++ +||+|||.++|||++|++.+.+....  ...+|.++|||+ 
T Consensus         4 ~~~~mka~~~~~~-------~~l~~--~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~-   71 (356)
T 1pl8_A            4 AKPNNLSLVVHGP-------GDLRL--ENYPIPEP-GP-NEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEA-   71 (356)
T ss_dssp             CCCCCEEEEEEET-------TEEEE--EECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEE-
T ss_pred             cccCceEEEEecC-------CcEEE--EEccCCCC-CC-CeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccce-
Confidence            3577999999875       22444  45777766 77 99999999999999999877642111  124689999995 


Q ss_pred             eceEEEEecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCc
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPL  131 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~  131 (347)
                       +|+|+++|++|++|++||||++                               .|+|+||++++++. ++++ |++++.
T Consensus        72 -~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~l~~  148 (356)
T 1pl8_A           72 -SGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDNVTF  148 (356)
T ss_dssp             -EEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTSCH
T ss_pred             -EEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHH-EEEC-cCCCCH
Confidence             4599999999999999999985                               37899999999999 9999 999544


Q ss_pred             cccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEec
Q 019042          132 SYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNY  210 (347)
Q Consensus       132 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~  210 (347)
                        +.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+++|+ +|++++++++++++++ ++|+++++|+
T Consensus       149 --~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~  223 (356)
T 1pl8_A          149 --EEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQI  223 (356)
T ss_dssp             --HHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred             --HHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcC
Confidence              4344556889999999 6689999999999996 9999999999999999 9999999999999999 9999999998


Q ss_pred             C---ChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeee
Q 019042          211 K---KEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGF  286 (347)
Q Consensus       211 ~---~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  286 (347)
                      +   .. ++.+.+.+.+++++|++||++|.. .+..++++++++|+++.+|....      ....+...++.+++++.|+
T Consensus       224 ~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~  296 (356)
T 1pl8_A          224 SKESPQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGV  296 (356)
T ss_dssp             SSCCHH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEEC
T ss_pred             cccccc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHhcceEEEEe
Confidence            7   34 778888887766799999999984 78999999999999999986321      1234556677899999887


Q ss_pred             EecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCCCcceEEEEeCCC
Q 019042          287 LAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAPE  347 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~~  347 (347)
                      ...      .+.++++++++++|+++  +.++++|+++++++||+.+.++ ..||+||+++++
T Consensus       297 ~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~  352 (356)
T 1pl8_A          297 FRY------CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS  352 (356)
T ss_dssp             CSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred             ccc------HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence            543      24588899999999964  6678899999999999999988 889999999653

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-49  Score=359.82  Aligned_cols=309  Identities=18%  Similarity=0.146  Sum_probs=254.8

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCC-CC-CCcccCCCCCCcee
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL-DK-PSFVASFNPGEPLS   82 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~-~~-~~~~~p~v~G~e~~   82 (347)
                      |+++|||++++++       +.++++  ++|.|.| ++ +||+|||++++||++|++.+.+. .. ....+|.++|||+ 
T Consensus         1 m~~~mka~~~~~~-------~~l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~-   68 (352)
T 1e3j_A            1 MASDNLSAVLYKQ-------NDLRLE--QRPIPEP-KE-DEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEA-   68 (352)
T ss_dssp             ---CCEEEEEEET-------TEEEEE--ECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEE-
T ss_pred             CcccCEEEEEEcC-------CcEEEE--EecCCCC-CC-CeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccc-
Confidence            5678999999876       234444  5777766 77 99999999999999999877632 21 1224689999994 


Q ss_pred             eceEEEEecCCCCCCCCCCEEEe-------------------------------ccCcceeEeecCCCcceeccCCCCCc
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEYSLIQSPQHLIKILDTNVPL  131 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~~  131 (347)
                       +|+|+++|++|++|++||+|++                               .|+|+||++++++. ++++ |+++  
T Consensus        69 -~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~~--  143 (352)
T 1e3j_A           69 -SGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDNV--  143 (352)
T ss_dssp             -EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTS--
T ss_pred             -eEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHH-eEEC-cCCC--
Confidence             5599999999999999999985                               37899999999999 9999 9994  


Q ss_pred             cccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          132 SYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       132 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                      +++.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+++|++|++++++++++++++ ++|+++++|++
T Consensus       144 ~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~  220 (352)
T 1e3j_A          144 SLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVD  220 (352)
T ss_dssp             CHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECC
T ss_pred             CHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCc
Confidence            444444556889999999 6689999999999996 99999999999999999999999999999999 99999999987


Q ss_pred             C-hhhHHHHHHHHCC---C-CccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeee
Q 019042          212 K-EPDLDAALKRCFP---E-GIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEG  285 (347)
Q Consensus       212 ~-~~~~~~~i~~~~~---~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  285 (347)
                      + . ++.+.+.+.++   + ++|++||++|.. .+..++++++++|+++.+|....      ....+...++.+++++.|
T Consensus       221 ~~~-~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g  293 (352)
T 1e3j_A          221 PAK-EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKS  293 (352)
T ss_dssp             TTT-SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEE
T ss_pred             ccc-cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHHHHHhcCcEEEE
Confidence            4 5 77778887775   4 899999999984 78999999999999999987321      123445677788999988


Q ss_pred             eEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHHHHHhHcCC-CcceEEEEeCC
Q 019042          286 FLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQ-NVGKQLVVVAP  346 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkivi~~~~  346 (347)
                      +...      .+.++++++++++|+++  +.++++|+++++++|++.+.+++ ..||+|++++.
T Consensus       294 ~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          294 VFRY------CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             CCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             eccc------hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            7543      24588899999999864  66788999999999999999888 68999999863

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=4e-51  Score=365.81  Aligned_cols=300  Identities=16%  Similarity=0.153  Sum_probs=236.8

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      |.+|||+++++    .|  +.++++  ++|.|.| ++ +||+|||++++||++|++.+.+.+. ...+|.++|||++  |
T Consensus         2 M~tMka~~~~~----~~--~~l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~--G   68 (315)
T 3goh_A            2 MEQHQVWAYQT----KT--HSVTLN--SVDIPAL-AA-DDILVQNQAIGINPVDWKFIKANPI-NWSNGHVPGVDGA--G   68 (315)
T ss_dssp             CCEEEEEEEET----TT--TEEEEE--EEECCCC-CT-TEEEEEEEEEEECHHHHHHHHHCTT-CCCTTCCCCSEEE--E
T ss_pred             CcceEEEEEeC----CC--CeeEEE--ecCCCCC-CC-CEEEEEEEEEecCHHHHHHHcCCCC-cCCCCCEeeeeeE--E
Confidence            56799999975    22  334554  4667766 77 9999999999999999998887543 2467999999954  5


Q ss_pred             EEEEecCCCCCCCCCCEEEec------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCC
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGE  159 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  159 (347)
                      +|+++|+++++|++||||+++      |+|+||++++++. ++++ |++++.. ++|+++++++|||+++ +.+++++|+
T Consensus        69 ~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~~g~  144 (315)
T 3goh_A           69 VIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDR-VMTL-PDNLSFE-RAAALPCPLLTAWQAF-EKIPLTKQR  144 (315)
T ss_dssp             EEEEECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTS-EEEC-CTTSCHH-HHHTSHHHHHHHHHHH-TTSCCCSCC
T ss_pred             EEEEeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHH-hccC-cCCCCHH-HHhhCccHHHHHHHHH-hhcCCCCCC
Confidence            999999999999999999984      8999999999999 9999 9995554 5788999999999999 779999999


Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchh
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM  239 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  239 (347)
                      +|||+|+ |++|++++|+|+..|++|++++ +++++++++ ++|++++++     | .+.+    ++++|++|||+|++.
T Consensus       145 ~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~-----d-~~~v----~~g~Dvv~d~~g~~~  211 (315)
T 3goh_A          145 EVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KRGVRHLYR-----E-PSQV----TQKYFAIFDAVNSQN  211 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HHTEEEEES-----S-GGGC----CSCEEEEECC-----
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-HcCCCEEEc-----C-HHHh----CCCccEEEECCCchh
Confidence            9999999 9999999999999999999999 888999999 999998884     2 1222    448999999999987


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc-----ccc---chHHHHHHHHHHHHcCCc
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD-----FYH---QYPKFLELVMPAIKEGKL  311 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~---~~~~~~~~~~~~~~~g~~  311 (347)
                      +..++++++++|+++.++.....         .....+.+++.+.......     .+.   ...+.++++++++++|++
T Consensus       212 ~~~~~~~l~~~G~~v~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  282 (315)
T 3goh_A          212 AAALVPSLKANGHIICIQDRIPA---------PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKM  282 (315)
T ss_dssp             --TTGGGEEEEEEEEEECCC-------------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHhcCCCEEEEEeCCCCc---------cccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCc
Confidence            78899999999999999753211         1112223344444333211     111   334578999999999999


Q ss_pred             ccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          312 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       312 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      ++.++++|+++++++||+.+.  +..||+|+++++
T Consensus       283 ~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          283 EIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             CCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             ccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            999999999999999999998  667899999875

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.1e-49  Score=368.07  Aligned_cols=315  Identities=16%  Similarity=0.123  Sum_probs=264.4

Q ss_pred             cccceEEEeeccCCCCCCCCe---------------------EEEeecccCCCCCCCCCeEEEEEEEeecChhccccccC
Q 019042            7 VSNKQVILSNYVTGFPKESDM---------------------KIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSK   65 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~---------------------~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~   65 (347)
                      |+|||+++.++  +.|.++..                     .++..++|.|.++++ +||+|||.+++||++|++.+.+
T Consensus         1 ~~m~a~~~~~~--~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~-~eVlVkv~a~gi~~~D~~~~~g   77 (404)
T 3ip1_A            1 MSLRAVRLHAK--WDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKP-TEIIIKVKACGICGSDVHMAQT   77 (404)
T ss_dssp             -CEEEEEEEEE--ECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCST-TEEEEEEEEEECCHHHHHHHCB
T ss_pred             CcceEEEecCC--CCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCc-CEEEEEEeEeeeCHHHHHHhcC
Confidence            57899999988  77753322                     456666788872388 9999999999999999988875


Q ss_pred             CC------CCCcccCCCCCCceeeceEEEEecCCC------CCCCCCCEEEe----------------------------
Q 019042           66 LD------KPSFVASFNPGEPLSGYGVSKVLDSTH------PNYKKDDLVWG----------------------------  105 (347)
Q Consensus        66 ~~------~~~~~~p~v~G~e~~g~G~v~~vG~~v------~~~~vGd~V~~----------------------------  105 (347)
                      ..      .....+|.++|||  ++|+|+++|++|      ++|++||+|++                            
T Consensus        78 ~~~~~~~~~~~~~~P~i~G~E--~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~  155 (404)
T 3ip1_A           78 DEEGYILYPGLTGFPVTLGHE--FSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF  155 (404)
T ss_dssp             CTTSBBSCCSCBCSSEECCCE--EEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT
T ss_pred             CCCccccccccCCCCcccCcc--ceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCC
Confidence            32      1123568999999  555999999999      89999999996                            


Q ss_pred             --ccCcceeEeecCCCcceeccCCCCCc-----cccccccCCchhhHHHHhhhh-cCCCCCCEEEEEcCCChHHHHHHHH
Q 019042          106 --LTSWEEYSLIQSPQHLIKILDTNVPL-----SYYTGILGMPGLTAYGGLYEL-CSPKKGEYVYVSAASGAVGQLVGQF  177 (347)
Q Consensus       106 --~g~~~~~~~~~~~~~~~~i~P~~~~~-----~~~aa~l~~~~~tA~~~l~~~-~~~~~~~~vlI~ga~g~vG~~a~ql  177 (347)
                        .|+|+||++++++. ++++ |++++.     ..++|+++.++.|||+++... +++++|++|||+|+ |++|++++|+
T Consensus       156 ~~~G~~aey~~v~~~~-~~~i-P~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiql  232 (404)
T 3ip1_A          156 NVDGAFAEYVKVDAKY-AWSL-RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAI  232 (404)
T ss_dssp             TBCCSSBSEEEEEGGG-EEEC-GGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHH
T ss_pred             CCCCCCcceEEechHH-eEec-cccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHH
Confidence              37999999999999 9999 998542     235889999999999999654 48999999999997 9999999999


Q ss_pred             HHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCch--hHHHHHHhh----cc
Q 019042          178 AKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGK--MLDAVLLNM----RI  249 (347)
Q Consensus       178 a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--~~~~~~~~l----~~  249 (347)
                      |+..|+ +|++++++++++++++ ++|+++++|+++. ++.+.+++++++ ++|++|||+|+.  .+..+.+++    ++
T Consensus       233 ak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~  310 (404)
T 3ip1_A          233 LKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGI  310 (404)
T ss_dssp             HHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCC
T ss_pred             HHHcCCCEEEEECCCHHHHHHHH-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCC
Confidence            999999 9999999999999999 9999999999887 999999999988 999999999986  777777888    99


Q ss_pred             CCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--cccceeeccccHHHH
Q 019042          250 HGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--YVEDIAEGLEKAPSA  327 (347)
Q Consensus       250 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a  327 (347)
                      +|+++.+|....      ....+...++.+++++.|+.....    .+.++++++++++| ++  +.++++|+++++++|
T Consensus       311 ~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A  379 (404)
T 3ip1_A          311 NATVAIVARADA------KIPLTGEVFQVRRAQIVGSQGHSG----HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEY  379 (404)
T ss_dssp             CCEEEECSCCCS------CEEECHHHHHHTTCEEEECCCCCS----TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHH
T ss_pred             CcEEEEeCCCCC------CCcccHHHHhccceEEEEecCCCc----hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHH
Confidence            999999998542      124567778889999998865331    35688999999999 65  568899999999999


Q ss_pred             HHHhHcCCCcceEEEEeCC
Q 019042          328 LVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       328 ~~~~~~~~~~gkivi~~~~  346 (347)
                      |+.+.    .||+||++++
T Consensus       380 ~~~~~----~GKvvl~~~~  394 (404)
T 3ip1_A          380 IKRLQ----TDKSLVKVTM  394 (404)
T ss_dssp             HHHTT----TCTTCSCEEE
T ss_pred             HHHHh----CCcEEEecCC
Confidence            99987    5788887754

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.6e-49  Score=361.63  Aligned_cols=307  Identities=17%  Similarity=0.170  Sum_probs=263.2

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      ..+|||++++++  +.    .+++++  +|.|.| ++ +||||||.++|||++|++.+.|.+. ...+|.++|||  ++|
T Consensus        15 ~~~mka~~~~~~--g~----~l~~~~--~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~G~~~-~~~~P~v~GhE--~~G   81 (380)
T 1vj0_A           15 GLKAHAMVLEKF--NQ----PLVYKE--FEISDI-PR-GSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHE--GAG   81 (380)
T ss_dssp             CEEEEEEEBCST--TS----CCEEEE--EEECCC-CT-TCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCE--EEE
T ss_pred             hhheEEEEEecC--CC----CeEEEE--ccCCCC-CC-CEEEEEEeEEeecccchHHhcCCCC-CCCCCcccCcC--cEE
Confidence            357999999887  42    356655  566656 77 9999999999999999998887432 23578999999  455


Q ss_pred             EEEEecCCCC------CCCCCCEEEe---------------------------------------ccCcceeEee-cCCC
Q 019042           86 VSKVLDSTHP------NYKKDDLVWG---------------------------------------LTSWEEYSLI-QSPQ  119 (347)
Q Consensus        86 ~v~~vG~~v~------~~~vGd~V~~---------------------------------------~g~~~~~~~~-~~~~  119 (347)
                      +|+++| +|+      +|++||+|++                                       .|+|+||+++ +++.
T Consensus        82 ~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~  160 (380)
T 1vj0_A           82 RVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD  160 (380)
T ss_dssp             EEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCC
T ss_pred             EEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccce
Confidence            999999 999      9999999986                                       3789999999 9998


Q ss_pred             cceeccCCCCCcccc-ccccCCchhhHHHHhhhhcC-CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Q 019042          120 HLIKILDTNVPLSYY-TGILGMPGLTAYGGLYELCS-PKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVN  196 (347)
Q Consensus       120 ~~~~i~P~~~~~~~~-aa~l~~~~~tA~~~l~~~~~-~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~  196 (347)
                       ++++ |+++  +++ .|++..++.|||+++. ..+ +++|++|||+| +|++|++++|+|+.+|+ +|+++++++++++
T Consensus       161 -~~~i-P~~l--~~~~~Aa~~~~~~ta~~al~-~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  234 (380)
T 1vj0_A          161 -VLKV-SEKD--DLDVLAMAMCSGATAYHAFD-EYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLK  234 (380)
T ss_dssp             -EEEE-CTTS--CHHHHHHHTTHHHHHHHHHH-TCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred             -EEEC-CCCC--ChHHhHhhhcHHHHHHHHHH-hcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHH
Confidence             9999 9994  444 6777779999999994 578 99999999999 79999999999999995 9999999999999


Q ss_pred             HHHHHhCCCeeEecC---ChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc-cccCCCCccc
Q 019042          197 LLKNKFGFDDAFNYK---KEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS-QYNLEKPEGV  270 (347)
Q Consensus       197 ~~~~~~g~~~vi~~~---~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~  270 (347)
                      +++ ++|+++++|++   +. ++.+.+++.+++ ++|++|||+|. ..+..++++++++|+++.+|... ..     ...
T Consensus       235 ~~~-~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~  307 (380)
T 1vj0_A          235 LAE-EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD-----PVP  307 (380)
T ss_dssp             HHH-HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC-----CEE
T ss_pred             HHH-HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC-----Cee
Confidence            999 99999999987   55 888899999887 89999999997 68999999999999999998754 21     123


Q ss_pred             cchHH-HHhccceeeeeEecccccchHHHHHHHHHHHHc--CCcccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          271 HNLMQ-VVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKE--GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       271 ~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      .+... ++.+++++.|+....     .+.++++++++++  |++++.++++|+++++++|++.+.+++.. |+||+++
T Consensus       308 ~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          308 FKVYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             ECHHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             EchHHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            45555 778999999986654     6789999999999  99998899999999999999999988878 9999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.6e-49  Score=357.71  Aligned_cols=307  Identities=16%  Similarity=0.129  Sum_probs=257.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccc-cccCCCCCCcccCCCCCCceeeceEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRG-RMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~-~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      |||++++++  +.     ++++  ++|.|+| ++ +||+|||++++||++|++ ...|...  ..+|.++|||+  +|+|
T Consensus         1 MkA~~~~~~--~~-----~~~~--e~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~p~v~G~E~--~G~V   65 (352)
T 3fpc_A            1 MKGFAMLSI--GK-----VGWI--EKEKPAP-GP-FDAIVRPLAVAPCTSDIHTVFEGAIG--ERHNMILGHEA--VGEV   65 (352)
T ss_dssp             CEEEEEEET--TE-----EEEE--ECCCCCC-CT-TCEEEEEEEEECCHHHHHHHHSCTTC--CCSSEECCCEE--EEEE
T ss_pred             CeEEEEccC--CC-----ceEE--eCCCCCC-CC-CeEEEEeCEEeEcccchHHHhCCCCC--CCCCcccCCcc--eEEE
Confidence            699999887  43     3454  5777766 77 999999999999999998 4466442  35689999994  5599


Q ss_pred             EEecCCCCCCCCCCEEEe---------------------------------ccCcceeEeecCC--CcceeccCCCCCcc
Q 019042           88 KVLDSTHPNYKKDDLVWG---------------------------------LTSWEEYSLIQSP--QHLIKILDTNVPLS  132 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~---------------------------------~g~~~~~~~~~~~--~~~~~i~P~~~~~~  132 (347)
                      +++|+++++|++||+|+.                                 .|+|+||+++++.  . ++++ |++++..
T Consensus        66 ~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~-~~~i-P~~~~~~  143 (352)
T 3fpc_A           66 VEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMN-LAHL-PKEIPLE  143 (352)
T ss_dssp             EEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHH-CEEC-CTTSCHH
T ss_pred             EEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCe-EEEC-CCCCCHH
Confidence            999999999999999984                                 3789999999976  6 9999 9995554


Q ss_pred             ccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          133 YYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       133 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                       ++|+++.++.|||+++ +.+++++|++|||+|+ |++|++++|+|++.|+ +|++++++++++++++ ++|+++++|++
T Consensus       144 -~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~  219 (352)
T 3fpc_A          144 -AAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EYGATDIINYK  219 (352)
T ss_dssp             -HHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HHTCCEEECGG
T ss_pred             -HHhhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEEcCC
Confidence             5788889999999999 6689999999999995 9999999999999999 8999999999999999 99999999998


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccc--hHHHHhccceeeeeE
Q 019042          212 KEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHN--LMQVVGKRIRMEGFL  287 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~  287 (347)
                      +. ++.+.+++++++ ++|++|||+|+ +.+..++++++++|+++.+|......    .....  ......+++++.++.
T Consensus       220 ~~-~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~----~~~~~~~~~~~~~~~~~i~g~~  294 (352)
T 3fpc_A          220 NG-DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGD----NIDIPRSEWGVGMGHKHIHGGL  294 (352)
T ss_dssp             GS-CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCS----EEEEETTTTGGGTBCEEEEEBC
T ss_pred             Cc-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCC----ceecchhHhhhhccccEEEEee
Confidence            87 899999999988 89999999998 68999999999999999999754210    01111  112234677777765


Q ss_pred             ecccccchHHHHHHHHHHHHcCCcccc--cceeec-cccHHHHHHHhHcCCC-cceEEEEeC
Q 019042          288 AGDFYHQYPKFLELVMPAIKEGKLVYV--EDIAEG-LEKAPSALVGIFTGQN-VGKQLVVVA  345 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~~~~~~a~~~~~~~~~-~gkivi~~~  345 (347)
                      ...    ..+.++++++++++|++++.  ++++|+ ++++++||+.+.+++. .+|+||+++
T Consensus       295 ~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          295 CPG----GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             CCC----HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             ccC----chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            422    15679999999999999874  788998 9999999999998764 489999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=3.7e-50  Score=365.91  Aligned_cols=309  Identities=15%  Similarity=0.059  Sum_probs=259.0

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ||++|||++++++  +.+    +++++.++|.|.| ++ +||||||+++|||++|++.+.|.+. ...+|.++|||+  +
T Consensus         3 ~p~~mka~~~~~~--~~~----l~~~~~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~GhE~--~   71 (360)
T 1piw_A            3 YPEKFEGIAIQSH--EDW----KNPKKTKYDPKPF-YD-HDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEI--V   71 (360)
T ss_dssp             TTTCEEEEEECCS--SST----TSCEEEEECCCCC-CT-TEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCCE--E
T ss_pred             CChheEEEEEecC--CCC----eeEEeccccCCCC-CC-CeEEEEEEEeccchhhHHHhcCCCC-CCCCCcccCcCc--e
Confidence            5678999999887  544    4555422666766 77 9999999999999999998887542 235689999995  5


Q ss_pred             eEEEEecCCCC-CCCCCCEEEe--------------------------------------ccCcceeEeecCCCcceecc
Q 019042           85 GVSKVLDSTHP-NYKKDDLVWG--------------------------------------LTSWEEYSLIQSPQHLIKIL  125 (347)
Q Consensus        85 G~v~~vG~~v~-~~~vGd~V~~--------------------------------------~g~~~~~~~~~~~~~~~~i~  125 (347)
                      |+|+++|++|+ +|++||||+.                                      .|+|+||++++++. ++++ 
T Consensus        72 G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-  149 (360)
T 1piw_A           72 GKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VVPI-  149 (360)
T ss_dssp             EEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EEEC-
T ss_pred             EEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhh-eEEC-
Confidence            59999999999 9999999931                                      27899999999999 9999 


Q ss_pred             CCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC
Q 019042          126 DTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD  205 (347)
Q Consensus       126 P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~  205 (347)
                      |++++.. ++|++++++.|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++ ++|++
T Consensus       150 P~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa~  225 (360)
T 1piw_A          150 PENIPSH-LAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGAD  225 (360)
T ss_dssp             CTTSCHH-HHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCS
T ss_pred             CCCCCHH-HhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCC
Confidence            9995554 588999999999999976 79999999999998 99999999999999999999999999999999 89999


Q ss_pred             eeEecCChhhHHHHHHHHCCCCccEEEECCCc---hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccce
Q 019042          206 DAFNYKKEPDLDAALKRCFPEGIDIYFENVGG---KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIR  282 (347)
Q Consensus       206 ~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      +++|+++..++.+.+.    +++|++|||+|.   ..+..++++++++|+++.+|....      ....+...++.++++
T Consensus       226 ~v~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~  295 (360)
T 1piw_A          226 HYIATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVS  295 (360)
T ss_dssp             EEEEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCE
T ss_pred             EEEcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC------ccccCHHHHHhCCeE
Confidence            9999865213433332    479999999997   688899999999999999987542      112344456778999


Q ss_pred             eeeeEecccccchHHHHHHHHHHHHcCCcccccceeecccc--HHHHHHHhHcCCCcceEEEEeCC
Q 019042          283 MEGFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEK--APSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       283 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      +.|+....     .+.++++++++++|++++.+ ++|++++  +++||+.+.+++..||+|+++++
T Consensus       296 i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          296 ISYSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             EEECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             EEEEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            99876654     57899999999999999888 8999999  99999999998888999999865

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=6.1e-51  Score=367.09  Aligned_cols=317  Identities=20%  Similarity=0.217  Sum_probs=256.7

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ||++|||++++++  +.+  ..+++++  +|.|.| ++ +||+|||+++|||++|++.+.|.......+|.++|||++  
T Consensus         1 m~~~mka~~~~~~--g~~--~~l~~~~--~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~--   70 (330)
T 1tt7_A            1 MSTLFQALQAEKN--ADD--VSVHVKT--ISTEDL-PK-DGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAA--   70 (330)
T ss_dssp             -CCEEEEEEECCG--GGS--CCCEEEE--EESSSS-CS-SSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEE--
T ss_pred             CCCcceEEEEecC--CCC--cceeEee--cCCCCC-CC-CEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEE--
Confidence            6788999999888  544  3355554  666666 77 999999999999999999888754323356899999954  


Q ss_pred             eEEEEecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhh--hc
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYE--LC  153 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~--~~  153 (347)
                      |+|+++  ++++|++||||++.         |+|+||++++++. ++++ |++++.. ++|++++.+.|||.++..  ..
T Consensus        71 G~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~  145 (330)
T 1tt7_A           71 GTVVSS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQNLSLK-EAMVYGTAGFTAALSVHRLEQN  145 (330)
T ss_dssp             EEEEEC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEc--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHH-eEEC-CCCCCHH-HHhhccchHHHHHHHHHHHHhc
Confidence            599986  46889999999853         7999999999999 9999 9995554 688889899999988753  36


Q ss_pred             CCCCCC-EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          154 SPKKGE-YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       154 ~~~~~~-~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      ++++|+ +|||+|++|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++. + .+.+++++++++|++|
T Consensus       146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~v~~~~~~-~-~~~~~~~~~~~~d~vi  222 (330)
T 1tt7_A          146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISREDV-Y-DGTLKALSKQQWQGAV  222 (330)
T ss_dssp             TCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHHH-C-SSCCCSSCCCCEEEEE
T ss_pred             CcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-h-HHHHHHhhcCCccEEE
Confidence            788886 9999999999999999999999999999999999999999 8999999987532 2 2223334444799999


Q ss_pred             ECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCc
Q 019042          233 ENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKL  311 (347)
Q Consensus       233 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~  311 (347)
                      ||+|++.+..++++++++|+++.+|...+.     ....+...++.+++++.|+..... .....+.++++.+++++|++
T Consensus       223 d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l  297 (330)
T 1tt7_A          223 DPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQL  297 (330)
T ss_dssp             ESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCS
T ss_pred             ECCcHHHHHHHHHhhcCCCEEEEEecCCCC-----ccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999999875421     122345567789999998753222 22235667888888889999


Q ss_pred             ccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          312 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       312 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ++.++++|+++++++|++.+.+++..||+||++
T Consensus       298 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          298 LTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             ccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            998989999999999999999888899999864

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=4.7e-49  Score=356.54  Aligned_cols=303  Identities=20%  Similarity=0.214  Sum_probs=236.7

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC-CcccCCCCCCceeec
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP-SFVASFNPGEPLSGY   84 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~-~~~~p~v~G~e~~g~   84 (347)
                      |.+|||++++++  +.+    ++++  ++|.|.| ++ +||+|||+++|||++|++.+.|.+.. ...+|.++|||++  
T Consensus         1 m~~mka~~~~~~--g~~----l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~--   68 (344)
T 2h6e_A            1 MVKSKAALLKKF--SEP----LSIE--DVNIPEP-QG-EEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENA--   68 (344)
T ss_dssp             CEEEEBCEECSC--CC-----------EEEECCC-CT-TCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEE--
T ss_pred             CceeEEEEEecC--CCC----CeEE--EeeCCCC-CC-CEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccce--
Confidence            457899999887  543    4554  4666766 77 99999999999999999988875421 2356899999954  


Q ss_pred             eEEEEecCCCCCCCCCCEEEec------------------------------cCcceeEeec-CCCcceeccCCCCCccc
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQ-SPQHLIKILDTNVPLSY  133 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~-~~~~~~~i~P~~~~~~~  133 (347)
                      |+|+++|++ ++|++||||+++                              |+|+||++++ ++. ++++  ++++.. 
T Consensus        69 G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~l~~~-  143 (344)
T 2h6e_A           69 GTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW-LVKL--NSLSPV-  143 (344)
T ss_dssp             EEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGG-EEEE--SSSCHH-
T ss_pred             EEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCccc-EEEe--CCCCHH-
Confidence            599999999 999999999753                              7899999999 988 9998  564443 


Q ss_pred             cccccCCchhhHHHHhhhh----cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCee
Q 019042          134 YTGILGMPGLTAYGGLYEL----CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGFDDA  207 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~----~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~v  207 (347)
                      ++|++++++.|||+++...    .++ +|++|||+|+ |++|++++|+|+++  |++|++++++++++++++ ++|++++
T Consensus       144 ~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v  220 (344)
T 2h6e_A          144 EAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYV  220 (344)
T ss_dssp             HHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCSEE
T ss_pred             HhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCCEE
Confidence            5889999999999999764    288 9999999998 99999999999999  999999999999999999 9999999


Q ss_pred             EecCC-hhhHHHHHHHHCCC-CccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceee
Q 019042          208 FNYKK-EPDLDAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRME  284 (347)
Q Consensus       208 i~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      +|+++ . ++   +.+++.+ ++|++|||+|.. .+..++++++++|+++.+|.....      ...+...++.+++++.
T Consensus       221 i~~~~~~-~~---~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~i~  290 (344)
T 2h6e_A          221 SEMKDAE-SL---INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR------VSLEAFDTAVWNKKLL  290 (344)
T ss_dssp             ECHHHHH-HH---HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHHHTTCEEE
T ss_pred             eccccch-HH---HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC------cccCHHHHhhCCcEEE
Confidence            98765 3 44   3444545 899999999986 999999999999999999875321      1345566778999999


Q ss_pred             eeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          285 GFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       285 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      |+....     .+.++++++++++|++++.+ ++|+++++++|++.+.+++..||+||++
T Consensus       291 g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          291 GSNYGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             ECCSCC-----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             EEecCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            876544     67899999999999999988 9999999999999999888889999864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.9e-49  Score=359.07  Aligned_cols=305  Identities=15%  Similarity=0.138  Sum_probs=256.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCceeeceE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLSGYGV   86 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~g~G~   86 (347)
                      |||++++++  +.|    ++++  ++|.|.| ++ +||+|||.++|||++|++.+.|.+..  ...+|.++|||  ++|+
T Consensus         1 Mka~~~~~~--g~~----l~~~--~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E--~~G~   68 (343)
T 2dq4_A            1 MRALAKLAP--EEG----LTLV--DRPVPEP-GP-GEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHE--FSGV   68 (343)
T ss_dssp             CEEEEECSS--SSS----CEEE--ECCCCCC-CT-TEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCE--EEEE
T ss_pred             CeEEEEeCC--CCc----EEEE--eccCCCC-CC-CEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCcc--ceEE
Confidence            689999887  543    4555  4677766 77 99999999999999999988874310  13468999999  5559


Q ss_pred             EEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCcccccc
Q 019042           87 SKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTG  136 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa  136 (347)
                      |+++|+++++|++||||++.                              |+|+||++++++. ++++ |++++.. ++|
T Consensus        69 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa  145 (343)
T 2dq4_A           69 VEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAEN-AWVN-PKDLPFE-VAA  145 (343)
T ss_dssp             EEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTTSCHH-HHT
T ss_pred             EEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHH-eEEC-CCCCCHH-HHH
Confidence            99999999999999999862                              7899999999999 9999 9995443 354


Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      .+ .++.|||+++.+.+++ +|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++ ++ +++++|+++. +
T Consensus       146 ~~-~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a~~v~~~~~~-~  219 (343)
T 2dq4_A          146 IL-EPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-ADRLVNPLEE-D  219 (343)
T ss_dssp             TH-HHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-CSEEECTTTS-C
T ss_pred             hh-hHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-HHhccCcCcc-C
Confidence            44 6788999999646888 9999999998 9999999999999999 9999999999999998 88 9999999876 8


Q ss_pred             HHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccch-HHHHhccceeeeeEeccccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNL-MQVVGKRIRMEGFLAGDFYH  293 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~  293 (347)
                      +.+.+++++++++|++||++|. ..+..++++++++|+++.+|....      ....+. ..++.+++++.|+....   
T Consensus       220 ~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~---  290 (343)
T 2dq4_A          220 LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAFGIAGRR---  290 (343)
T ss_dssp             HHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEEECCSCC---
T ss_pred             HHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEEEeecCC---
Confidence            8889988883389999999998 789999999999999999987431      123455 56778999999876541   


Q ss_pred             chHHHHHHHHHHHHcCCc--ccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          294 QYPKFLELVMPAIKEGKL--VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                       ..+.++++++++++|++  ++.++++|+++++++|++.+.+++. ||+|++++
T Consensus       291 -~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          291 -LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             -TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             -CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence             25779999999999994  6778899999999999999988877 99999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.9e-49  Score=357.32  Aligned_cols=306  Identities=18%  Similarity=0.209  Sum_probs=254.2

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      .|+|||+++.++  +.+    ++++  ++|.|.| ++ +||+|||.++|||++|++.+.|... ...+|.++|||++  |
T Consensus        20 ~~~~~a~~~~~~--~~~----l~~~--~~p~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~--G   86 (369)
T 1uuf_A           20 GLKIKAVGAYSA--KQP----LEPM--DITRREP-GP-NDVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIV--G   86 (369)
T ss_dssp             ---CEEEEBSST--TSC----CEEE--ECCCCCC-CT-TEEEEEEEEEECCHHHHHHHHCTTS-CCCSSBCCCCCEE--E
T ss_pred             CceEEEEEEcCC--CCC----cEEE--EecCCCC-CC-CeEEEEEEEEeecHHHHHHhcCCCC-CCCCCeecccCce--E
Confidence            578899888654  333    4555  4777766 77 9999999999999999998877432 2346899999954  5


Q ss_pred             EEEEecCCCCCCCCCCEEEe---------------------------------------ccCcceeEeecCCCcceeccC
Q 019042           86 VSKVLDSTHPNYKKDDLVWG---------------------------------------LTSWEEYSLIQSPQHLIKILD  126 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~---------------------------------------~g~~~~~~~~~~~~~~~~i~P  126 (347)
                      +|+++|++|++|++||+|++                                       .|+|+||++++++. ++++ |
T Consensus        87 ~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~-~~~~-P  164 (369)
T 1uuf_A           87 RVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VLRI-R  164 (369)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CEEC-C
T ss_pred             EEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchh-EEEC-C
Confidence            99999999999999999973                                       17899999999999 9999 9


Q ss_pred             CC-CCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC
Q 019042          127 TN-VPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD  205 (347)
Q Consensus       127 ~~-~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~  205 (347)
                      ++ ++.. ++|+++++++|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|++++++++++++++ ++|++
T Consensus       165 ~~~ls~~-~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~  240 (369)
T 1uuf_A          165 HPQEQLA-AVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGAD  240 (369)
T ss_dssp             SCGGGHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCS
T ss_pred             CCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCc
Confidence            99 8776 688999999999999976 68999999999997 99999999999999999999999999999999 89999


Q ss_pred             eeEecCChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceee
Q 019042          206 DAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRME  284 (347)
Q Consensus       206 ~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      +++|+.+. ++.+.   +. +++|++|||+|.. .+..++++++++|+++.+|.....     ....+...++.+++++.
T Consensus       241 ~vi~~~~~-~~~~~---~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~  310 (369)
T 1uuf_A          241 EVVNSRNA-DEMAA---HL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRAIA  310 (369)
T ss_dssp             EEEETTCH-HHHHT---TT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEE
T ss_pred             EEeccccH-HHHHH---hh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCC-----ccccCHHHHHhCCcEEE
Confidence            99998875 54333   33 4799999999985 789999999999999999875421     11345566778999999


Q ss_pred             eeEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          285 GFLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       285 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      |+....     .+.++++++++++|++++.++ +|+++++++|++.+.+++..||+|+++++
T Consensus       311 g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          311 GSMIGG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             ECCSCC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             EeecCC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            886654     577899999999999998765 69999999999999998888999999864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=2e-48  Score=352.85  Aligned_cols=306  Identities=20%  Similarity=0.232  Sum_probs=261.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC-------CcccCCCCCCce
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP-------SFVASFNPGEPL   81 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~-------~~~~p~v~G~e~   81 (347)
                      |||++++++  +.+    ++++  ++|.|.| ++ +||+|||.+++||++|++.+.|.+..       ...+|.++|||+
T Consensus         1 Mka~~~~~~--g~~----l~~~--~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~   70 (347)
T 1jvb_A            1 MRAVRLVEI--GKP----LSLQ--EIGVPKP-KG-PQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI   70 (347)
T ss_dssp             CEEEEECST--TSC----CEEE--ECCCCCC-CT-TCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEE
T ss_pred             CeEEEEecC--CCC----eEEE--EeeCCCC-CC-CeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccc
Confidence            689999887  544    4554  4777766 77 99999999999999999988764321       235689999994


Q ss_pred             eeceEEEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecC-CCcceeccCCCCC
Q 019042           82 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQS-PQHLIKILDTNVP  130 (347)
Q Consensus        82 ~g~G~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~-~~~~~~i~P~~~~  130 (347)
                        +|+|+++|+++++|++||+|+++                              |+|+||+++++ +. ++++  ++++
T Consensus        71 --~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~~~  145 (347)
T 1jvb_A           71 --AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY-MYKL--RRLN  145 (347)
T ss_dssp             --EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGG-EEEC--SSSC
T ss_pred             --eEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccc-eEEe--CCCC
Confidence              55999999999999999999752                              78999999999 88 9998  5544


Q ss_pred             ccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEe
Q 019042          131 LSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFN  209 (347)
Q Consensus       131 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~  209 (347)
                      .. ++|++++++.|||+++.+ +++++|++|+|+|++|++|++++|+++.. |++|+++++++++++.++ ++|+++++|
T Consensus       146 ~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~  222 (347)
T 1jvb_A          146 AV-EAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVIN  222 (347)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEE
T ss_pred             HH-HcccchhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCEEec
Confidence            43 588999999999999954 89999999999999779999999999999 999999999999999998 899999999


Q ss_pred             cCChhhHHHHHHHHCC-CCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeE
Q 019042          210 YKKEPDLDAALKRCFP-EGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFL  287 (347)
Q Consensus       210 ~~~~~~~~~~i~~~~~-~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  287 (347)
                      +.+. ++.+.+.+++. +++|++||++|.. .+..++++++++|+++.+|.....    +  ..+...++.+++++.|+.
T Consensus       223 ~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~----~--~~~~~~~~~~~~~i~g~~  295 (347)
T 1jvb_A          223 ASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD----L--HYHAPLITLSEIQFVGSL  295 (347)
T ss_dssp             TTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCC----C--CCCHHHHHHHTCEEEECC
T ss_pred             CCCc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC----C--CCCHHHHHhCceEEEEEe
Confidence            8876 78888888886 5899999999985 889999999999999999875311    1  345556778899999876


Q ss_pred             ecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          288 AGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ...     .+.++++++++++|++++.++++|+++++++|++.+.+++..||+||++
T Consensus       296 ~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          296 VGN-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             SCC-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ccC-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            554     6789999999999999999999999999999999999988889999974

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-49  Score=357.98  Aligned_cols=315  Identities=20%  Similarity=0.220  Sum_probs=250.9

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      |.+|||+++.++  +.|.    .++..++|.|.| ++ +||+|||.++|||++|++.+.|.......+|.++|||++  |
T Consensus         1 m~~mka~~~~~~--g~~~----~l~~~~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~--G   70 (328)
T 1xa0_A            1 MSAFQAFVVNKT--ETEF----TAGVQTISMDDL-PE-GDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLA--G   70 (328)
T ss_dssp             CCEEEEEEEEEE--TTEE----EEEEEEEEGGGS-CS-CSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEE--E
T ss_pred             CCcceEEEEecC--CCcc----eeEEEeccCCCC-CC-CeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceE--E
Confidence            457899999998  6542    344455677766 77 999999999999999998887743222356899999954  5


Q ss_pred             EEEEecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhh--hcC
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYE--LCS  154 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~--~~~  154 (347)
                      +|+++  ++++|++||||++.         |+|+||++++++. ++++ |++++.. ++|++++++.|||.++..  ..+
T Consensus        71 ~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~  145 (328)
T 1xa0_A           71 VVVSS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKGLTLK-EAMAIGTAGFTAALSIHRLEEHG  145 (328)
T ss_dssp             EEEEC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHH-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHHhhcC
Confidence            99885  57899999999853         8999999999999 9999 9995554 688889899999988753  367


Q ss_pred             CCCCC-EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          155 PKKGE-YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       155 ~~~~~-~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      +++|+ +|||+|++|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++. + .+.+++++++++|++||
T Consensus       146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~-~~~~~~~~~~~~d~vid  222 (328)
T 1xa0_A          146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAREDV-M-AERIRPLDKQRWAAAVD  222 (328)
T ss_dssp             CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEECC-----------CCSCCEEEEEE
T ss_pred             CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCc-H-HHHHHHhcCCcccEEEE
Confidence            88986 9999999999999999999999999999999999999999 8999999998764 3 34455555558999999


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcc
Q 019042          234 NVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLV  312 (347)
Q Consensus       234 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~  312 (347)
                      |+|++.+..++++++++|+++.+|...+..     ...+...++.+++++.|+..... .....+.++.+.+++++| ++
T Consensus       223 ~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~  296 (328)
T 1xa0_A          223 PVGGRTLATVLSRMRYGGAVAVSGLTGGAE-----VPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LE  296 (328)
T ss_dssp             CSTTTTHHHHHHTEEEEEEEEECSCCSSSC-----CCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HH
T ss_pred             CCcHHHHHHHHHhhccCCEEEEEeecCCCC-----CCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Cc
Confidence            999989999999999999999998754321     12344567789999998753222 222346678888888888 77


Q ss_pred             cccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          313 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       313 ~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      + ++++|+++++++|++.+.+++..||+||+++
T Consensus       297 ~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          297 R-IAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             H-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             e-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            6 4689999999999999999888999999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=7e-48  Score=347.53  Aligned_cols=323  Identities=40%  Similarity=0.619  Sum_probs=261.9

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      -+|+||||++.+++.|.|+++.+++++  +|.|.| ++ +||+|||.++|||++|+.. .    ....+|.++|||++  
T Consensus         4 ~~~~mka~~~~~~~~g~~~~~~l~~~e--~~~P~~-~~-~eVlVkv~a~gi~~~~~~~-~----~~~~~p~~~g~e~~--   72 (333)
T 1v3u_A            4 FMVKAKSWTLKKHFQGKPTQSDFELKT--VELPPL-KN-GEVLLEALFLSVDPYMRIA-S----KRLKEGAVMMGQQV--   72 (333)
T ss_dssp             CCCEEEEEEECC-----CCGGGEEEEE--EECCCC-CT-TCEEEEEEEEECCTHHHHH-T----TTCCTTSBCCCCEE--
T ss_pred             ccccccEEEEeecCCCCCCccceEEEe--CCCCCC-CC-CEEEEEEEEeccCHHHccc-c----CcCCCCcccccceE--
Confidence            367899999988644555445666665  566656 77 9999999999999998732 1    12456889999954  


Q ss_pred             eEEEEecCCCCCCCCCCEEEeccCcceeEeecCCCcceeccCCC----CCccccccccCCchhhHHHHhhhhcCCCCCCE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTN----VPLSYYTGILGMPGLTAYGGLYELCSPKKGEY  160 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~----~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  160 (347)
                      |+|++.  ++++|++||||++.|+|++|++++++. ++++ |++    ++....+|+++++++|||+++.+.+++++|++
T Consensus        73 G~Vv~~--~v~~~~vGdrV~~~g~~aey~~v~~~~-~~~i-P~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~  148 (333)
T 1v3u_A           73 ARVVES--KNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGET  148 (333)
T ss_dssp             EEEEEE--SCTTSCTTCEEEECCCSBSEEEESSTT-EEEC-C--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCE
T ss_pred             EEEEec--CCCCCCCCCEEEecCceEEEEEechHH-eEEc-CcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCE
Confidence            577774  688999999999999999999999999 9999 997    55542268999999999999977789999999


Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCC-hhhHHHHHHHHCCCCccEEEECCCchh
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKK-EPDLDAALKRCFPEGIDIYFENVGGKM  239 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~~~~~~d~vid~~g~~~  239 (347)
                      |+|+|++|++|++++|+++..|++|+++++++++++.++ ++|++.++|+.+ . ++.+.+.+.+++++|++|||+|...
T Consensus       149 vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~  226 (333)
T 1v3u_A          149 VLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYFDNVGGEF  226 (333)
T ss_dssp             EEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEEESSCHHH
T ss_pred             EEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEEECCChHH
Confidence            999999999999999999999999999999999999997 999998999877 5 8888888887668999999999988


Q ss_pred             HHHHHHhhccCCEEEEEcccccccCCC-CccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccccce
Q 019042          240 LDAVLLNMRIHGRIAVCGMISQYNLEK-PEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVEDI  317 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~  317 (347)
                      +..++++++++|+++.+|.....+... +....+...++.+++++.|+....+ +..+++.++++++++++|++++....
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~  306 (333)
T 1v3u_A          227 LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHV  306 (333)
T ss_dssp             HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred             HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcccc
Confidence            999999999999999998754321000 1111245567789999999876554 24457789999999999999988777


Q ss_pred             eeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          318 AEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       318 ~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +++++++++|++.+.+++..||+|+++
T Consensus       307 ~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          307 TKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             EECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            889999999999999988899999974

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=3.1e-48  Score=352.71  Aligned_cols=306  Identities=16%  Similarity=0.130  Sum_probs=253.1

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      +|+++++++..    .+  +.++++  ++|.|.| ++ +||+|||.++|||++|++.+.|.+. ...+|.++|||  ++|
T Consensus         7 ~m~~~a~~~~~----~~--~~l~~~--~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE--~~G   73 (357)
T 2cf5_A            7 ERKTTGWAARD----PS--GILSPY--TYTLRET-GP-EDVNIRIICCGICHTDLHQTKNDLG-MSNYPMVPGHE--VVG   73 (357)
T ss_dssp             CCEEEEEEECS----TT--CCEEEE--EEECCCC-CT-TEEEEEEEEEEECHHHHHHHTCTTT-CCCSSBCCCCE--EEE
T ss_pred             cceeEEEEEcc----CC--CCcEEE--EecCCCC-CC-CEEEEEEEEEeecchhhhhhcCCCC-CCCCCeecCcc--eeE
Confidence            56666666643    33  235554  4667766 77 9999999999999999998877442 24568999999  455


Q ss_pred             EEEEecCCCCCCCCCCEEEe--------------------------------------ccCcceeEeecCCCcceeccCC
Q 019042           86 VSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEYSLIQSPQHLIKILDT  127 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~~~~~~~~~~i~P~  127 (347)
                      +|+++|++|++|++||+|+.                                      .|+|+||++++++. ++++ |+
T Consensus        74 ~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~  151 (357)
T 2cf5_A           74 EVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKF-VVKI-PE  151 (357)
T ss_dssp             EEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGG-EEEC-CS
T ss_pred             EEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhh-EEEC-cC
Confidence            99999999999999999973                                      37899999999999 9999 99


Q ss_pred             CCCccccccccCCchhhHHHHhhhhcCCC-CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe
Q 019042          128 NVPLSYYTGILGMPGLTAYGGLYELCSPK-KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD  206 (347)
Q Consensus       128 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~-~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~  206 (347)
                      +++.. ++|++++.+.|||+++.+ .+++ +|++|+|+|+ |++|++++|+|+.+|++|+++++++++++.+++++|+++
T Consensus       152 ~ls~~-~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~  228 (357)
T 2cf5_A          152 GMAVE-QAAPLLCAGVTVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD  228 (357)
T ss_dssp             SCCHH-HHTGGGTHHHHHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC
T ss_pred             CCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce
Confidence            95554 588999999999999965 6888 9999999995 999999999999999999999999998888766899999


Q ss_pred             eEecCChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeee
Q 019042          207 AFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEG  285 (347)
Q Consensus       207 vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  285 (347)
                      ++|+++. +   .+.+.++ ++|++|||+|.. .+..++++++++|+++.+|.....     ....+.. ++.+++++.|
T Consensus       229 vi~~~~~-~---~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~-~~~~~~~i~g  297 (357)
T 2cf5_A          229 YVIGSDQ-A---KMSELAD-SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNP-----LQFLTPL-LMLGRKVITG  297 (357)
T ss_dssp             EEETTCH-H---HHHHSTT-TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSC-----CCCCHHH-HHHHTCEEEE
T ss_pred             eeccccH-H---HHHHhcC-CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCC-----ccccCHH-HHhCccEEEE
Confidence            9998763 3   4455543 699999999974 789999999999999999875421     1113344 7788999998


Q ss_pred             eEecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          286 FLAGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      +....     .+.++++++++++|++++.+ ++|+++++++|++.+.+++..||+|+++++
T Consensus       298 ~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          298 SFIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             CCSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             EccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            86654     57789999999999998876 689999999999999999888999999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=6.4e-49  Score=359.69  Aligned_cols=324  Identities=19%  Similarity=0.254  Sum_probs=253.7

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC--------------CC
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK--------------PS   70 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~--------------~~   70 (347)
                      |+++|||+++.++  |.|  ..+++. .++|.|.|+++ +||+|||.++|||++|++.+.|...              ..
T Consensus        18 ~~~~mka~~~~~~--g~~--~~l~~~-~~~p~P~~~~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~   91 (375)
T 2vn8_A           18 LYFQSMAWVIDKY--GKN--EVLRFT-QNMMMPIIHYP-NEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKG   91 (375)
T ss_dssp             CCCCEEEEEBSSC--CSG--GGCEEE-EEECCCCCCST-TEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTT
T ss_pred             cCccceeEEeccC--CCc--cceEEe-ccccCCCCCCC-CEEEEEEEEEEcCHHHHHHhccCcccccccccccccccccc
Confidence            5678999999888  766  345551 34666653377 9999999999999999998876421              11


Q ss_pred             cccCCCCCCceeeceEEEEecCCCCCCCCCCEEEe------ccCcceeEeecCCCcceeccCCCCCccccccccCCchhh
Q 019042           71 FVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLT  144 (347)
Q Consensus        71 ~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~t  144 (347)
                      ..+|.++|||+  +|+|+++|++|++|++||+|++      .|+|+||++++++. ++++ |++++.. ++|+++.+++|
T Consensus        92 ~~~P~v~G~E~--~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~ls~~-~Aa~l~~~~~t  166 (375)
T 2vn8_A           92 EEFPLTLGRDV--SGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNE-VSHK-PKSLTHT-QAASLPYVALT  166 (375)
T ss_dssp             TTCSBCCCCEE--EEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTSHHHHHH
T ss_pred             ccCCcccceee--eEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHH-eeeC-CCCCCHH-HHhhhHHHHHH
Confidence            23789999995  4599999999999999999998      48999999999999 9999 9995554 68888889999


Q ss_pred             HHHHhhhhcC----CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHH
Q 019042          145 AYGGLYELCS----PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL  220 (347)
Q Consensus       145 A~~~l~~~~~----~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i  220 (347)
                      ||+++.+.++    +++|++|+|+||+|++|++++|+|+..|++|++++ ++++++.++ ++|+++++|+++. ++.+.+
T Consensus       167 A~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~~-~~~~~~  243 (375)
T 2vn8_A          167 AWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEEQL  243 (375)
T ss_dssp             HHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTSS-CHHHHH
T ss_pred             HHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-HcCCCEEEECCch-HHHHHH
Confidence            9999977778    89999999999999999999999999999999998 567889998 9999999999876 777777


Q ss_pred             HHHCCCCccEEEECCCch--hHHHHHHhhccCCEEEEEcccccccCCCCccccc----hHHHHhccc-ee-eeeEec-cc
Q 019042          221 KRCFPEGIDIYFENVGGK--MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHN----LMQVVGKRI-RM-EGFLAG-DF  291 (347)
Q Consensus       221 ~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~-~~-~g~~~~-~~  291 (347)
                      .+.  +++|++|||+|+.  .+..++++++++|+++.+|...............    ...++.+++ ++ .+.... .+
T Consensus       244 ~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  321 (375)
T 2vn8_A          244 KSL--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAF  321 (375)
T ss_dssp             HTS--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred             hhc--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEE
Confidence            653  3699999999986  4488889999999999998643210000000000    012222222 11 121111 01


Q ss_pred             ccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          292 YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       292 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      .....+.++++++++++|++++.++++|+++++++|++.+.+++..||+|+++
T Consensus       322 ~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          322 FMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             CCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             eCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            11236778999999999999999999999999999999999988889999986

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2.9e-47  Score=347.28  Aligned_cols=305  Identities=15%  Similarity=0.136  Sum_probs=253.0

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEE
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVS   87 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v   87 (347)
                      +||++.+..+  +.+  +.++++  ++|.|.| ++ +||+|||.++|||++|++.+.|.+.. ..+|.++|||++  |+|
T Consensus        14 ~mk~~~~~~~--~~~--~~l~~~--~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~--G~V   82 (366)
T 1yqd_A           14 PVKAFGWAAR--DQS--GHLSPF--NFSRRAT-GE-EDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIV--GEV   82 (366)
T ss_dssp             SEEEEEEEEC--STT--CCEEEE--EEEECCC-CT-TEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEE--EEE
T ss_pred             CeeEEEEEEc--CCC--CCcEEE--EccCCCC-CC-CeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceE--EEE
Confidence            3555555555  444  334554  5677766 77 99999999999999999988774322 356899999954  599


Q ss_pred             EEecCCCCCCCCCCEEEe--------------------------------------ccCcceeEeecCCCcceeccCCCC
Q 019042           88 KVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEYSLIQSPQHLIKILDTNV  129 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~~~~~~~~~~i~P~~~  129 (347)
                      +++|++|++|++||+|+.                                      .|+|+||++++++. ++++ |+++
T Consensus        83 ~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~l  160 (366)
T 1yqd_A           83 TEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERY-IIRF-PDNM  160 (366)
T ss_dssp             EEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGG-CEEC-CTTS
T ss_pred             EEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhh-EEEC-CCCC
Confidence            999999999999999973                                      27899999999999 9999 9996


Q ss_pred             CccccccccCCchhhHHHHhhhhcCCC-CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeE
Q 019042          130 PLSYYTGILGMPGLTAYGGLYELCSPK-KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAF  208 (347)
Q Consensus       130 ~~~~~aa~l~~~~~tA~~~l~~~~~~~-~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi  208 (347)
                      +.. ++|++++++.|||+++.+ .++. +|++|||+|+ |++|++++|+|+..|++|+++++++++++.+++++|+++++
T Consensus       161 s~~-~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~  237 (366)
T 1yqd_A          161 PLD-GGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL  237 (366)
T ss_dssp             CTT-TTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEE
T ss_pred             CHH-HhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEE
Confidence            554 688999999999999965 5788 9999999996 99999999999999999999999999888876589999999


Q ss_pred             ecCChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeE
Q 019042          209 NYKKEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFL  287 (347)
Q Consensus       209 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  287 (347)
                      |+++. +   .+.+.++ ++|++|||+|.. .+..++++++++|+++.+|....      ....+...++.+++++.|+.
T Consensus       238 ~~~~~-~---~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~i~g~~  306 (366)
T 1yqd_A          238 VSRDQ-E---QMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK------PLELPAFSLIAGRKIVAGSG  306 (366)
T ss_dssp             ETTCH-H---HHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS------CEEECHHHHHTTTCEEEECC
T ss_pred             eccCH-H---HHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC------CCCcCHHHHHhCCcEEEEec
Confidence            98764 3   4555553 699999999974 78999999999999999987532      12345566788999999886


Q ss_pred             ecccccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEeC
Q 019042          288 AGDFYHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~  345 (347)
                      ...     .+.++++++++++|++++.+ ++|+++++++||+.+.+++..||+|++++
T Consensus       307 ~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  358 (366)
T 1yqd_A          307 IGG-----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVG  358 (366)
T ss_dssp             SCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred             CCC-----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence            554     56789999999999999876 68999999999999999988899999874

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=8.3e-48  Score=354.88  Aligned_cols=310  Identities=18%  Similarity=0.175  Sum_probs=256.1

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCC-----CCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCcee
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPE-----GSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLS   82 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~-----~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~   82 (347)
                      +|||++++++       ..++++  ++|.|.|.     ++ +||+|||.++|||++|++.+.|..  ...+|.++|||+ 
T Consensus         2 ~MkA~~~~~~-------~~l~~~--~~p~P~~~~~~~~~~-~eVlVkv~a~gic~~D~~~~~G~~--~~~~p~v~GhE~-   68 (398)
T 2dph_A            2 GNKSVVYHGT-------RDLRVE--TVPYPKLEHNNRKLE-HAVILKVVSTNICGSDQHIYRGRF--IVPKGHVLGHEI-   68 (398)
T ss_dssp             CEEEEEEEET-------TEEEEE--EECCCCSEETTEECT-TCEEEEEEEEECCHHHHHHHTTSS--CCCTTCBCCCCE-
T ss_pred             ccEEEEEEcC-------CCEEEE--EccCCCCCCCcCCCC-CeEEEEEEEEeecHHHHHHhcCCC--CCCCCcccCCce-
Confidence            5799999876       234555  45666541     24 899999999999999999888743  235689999994 


Q ss_pred             eceEEEEecCCCCCCCCCCEEEe-----------------------------------------ccCcceeEeecCC--C
Q 019042           83 GYGVSKVLDSTHPNYKKDDLVWG-----------------------------------------LTSWEEYSLIQSP--Q  119 (347)
Q Consensus        83 g~G~v~~vG~~v~~~~vGd~V~~-----------------------------------------~g~~~~~~~~~~~--~  119 (347)
                       +|+|+++|++|++|++||+|++                                         .|+|+||++++++  .
T Consensus        69 -~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~  147 (398)
T 2dph_A           69 -TGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYM  147 (398)
T ss_dssp             -EEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHH
T ss_pred             -EEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCe
Confidence             5599999999999999999984                                         2789999999987  6


Q ss_pred             cceeccCCCCCcccc----ccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHH
Q 019042          120 HLIKILDTNVPLSYY----TGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEK  194 (347)
Q Consensus       120 ~~~~i~P~~~~~~~~----aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~  194 (347)
                       ++++ |++++.. +    +|+++.++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus       148 -~~~i-P~~~~~~-~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~  222 (398)
T 2dph_A          148 -LLKF-GDKEQAM-EKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPER  222 (398)
T ss_dssp             -CEEC-SSHHHHH-HTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred             -EEEC-CCCCChh-hhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence             9999 9984443 4    788999999999999 5689999999999996 9999999999999999 99999999999


Q ss_pred             HHHHHHHhCCCeeEecCChhhH-HHHHHHHCCC-CccEEEECCCch---------------hHHHHHHhhccCCEEEEEc
Q 019042          195 VNLLKNKFGFDDAFNYKKEPDL-DAALKRCFPE-GIDIYFENVGGK---------------MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       195 ~~~~~~~~g~~~vi~~~~~~~~-~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g  257 (347)
                      +++++ ++|++ ++|+++. ++ .+.+++++++ ++|++|||+|..               .+..++++++++|+++.+|
T Consensus       223 ~~~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G  299 (398)
T 2dph_A          223 LKLLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG  299 (398)
T ss_dssp             HHHHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred             HHHHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence            99999 99995 8998876 65 8888888877 899999999974               5899999999999999998


Q ss_pred             cccc-ccCC------CCccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc--c--ccceeeccccHHH
Q 019042          258 MISQ-YNLE------KPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV--Y--VEDIAEGLEKAPS  326 (347)
Q Consensus       258 ~~~~-~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~~  326 (347)
                      .... ....      .....++...++.+++++.++....     .+.++++++++++|+++  +  .++++|+++++++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~  374 (398)
T 2dph_A          300 IYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPD  374 (398)
T ss_dssp             CCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHH
T ss_pred             cccccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHH
Confidence            7521 1000      0112345556778899988764432     45688999999999998  6  5788999999999


Q ss_pred             HHHHhHcCCCcceEEEEeC
Q 019042          327 ALVGIFTGQNVGKQLVVVA  345 (347)
Q Consensus       327 a~~~~~~~~~~gkivi~~~  345 (347)
                      ||+.+.+++. ||+||+++
T Consensus       375 A~~~~~~~~~-gKvvv~~~  392 (398)
T 2dph_A          375 GYAKFDKGSP-AKFVIDPH  392 (398)
T ss_dssp             HHHHHHTTCS-CEEEECTT
T ss_pred             HHHHHhcCCc-eEEEEecC
Confidence            9999998887 99999875

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.9e-47  Score=350.63  Aligned_cols=312  Identities=18%  Similarity=0.151  Sum_probs=254.8

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCe------EEEEEEEeecChhccccccCCCCCCcccCCCCCCce
Q 019042            8 SNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDT------VLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPL   81 (347)
Q Consensus         8 ~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~e------vlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~   81 (347)
                      +|||+++.++       ..++++  ++|.|+|..+ +|      |||||.+++||++|++.+.|.+  ...+|.++||| 
T Consensus         2 ~Mka~~~~~~-------~~l~~~--~~p~P~~~~~-~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~--~~~~p~v~GhE-   68 (398)
T 1kol_A            2 GNRGVVYLGS-------GKVEVQ--KIDYPKMQDP-RGKKIEHGVILKVVSTNICGSDQHMVRGRT--TAQVGLVLGHE-   68 (398)
T ss_dssp             CEEEEEEEET-------TEEEEE--EECCCCSBCT-TSCBCSSCEEEEEEEEECCHHHHHHHTTCS--CCCTTCBCCCC-
T ss_pred             ccEEEEEecC-------CceEEE--EecCCCCCCC-CcccccceEEEEEEEEeechhhHHHHcCCC--CCCCCcccCcc-
Confidence            5799999876       234554  4666766226 78      9999999999999999888743  23568999999 


Q ss_pred             eeceEEEEecCCCCCCCCCCEEEe----------------------------------------ccCcceeEeecCC--C
Q 019042           82 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------LTSWEEYSLIQSP--Q  119 (347)
Q Consensus        82 ~g~G~v~~vG~~v~~~~vGd~V~~----------------------------------------~g~~~~~~~~~~~--~  119 (347)
                       ++|+|+++|++|++|++||||+.                                        .|+|+||+++++.  .
T Consensus        69 -~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~  147 (398)
T 1kol_A           69 -ITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFN  147 (398)
T ss_dssp             -EEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHH
T ss_pred             -cEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCe
Confidence             45599999999999999999973                                        1789999999986  6


Q ss_pred             cceeccCCCCCcccc----ccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHH
Q 019042          120 HLIKILDTNVPLSYY----TGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEK  194 (347)
Q Consensus       120 ~~~~i~P~~~~~~~~----aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~  194 (347)
                       ++++ |++++.. +    +|+++.++.|||+++. .+++++|++|||+|+ |++|++++|+|+++|+ +|++++++++|
T Consensus       148 -~~~~-P~~~~~~-~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~  222 (398)
T 1kol_A          148 -LLKL-PDRDKAM-EKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPAR  222 (398)
T ss_dssp             -CEEC-SCHHHHH-HTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH
T ss_pred             -EEEC-CCCcchh-hhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHH
Confidence             9999 9984333 3    6899999999999996 689999999999995 9999999999999999 79999999999


Q ss_pred             HHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCch----------------hHHHHHHhhccCCEEEEEc
Q 019042          195 VNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGK----------------MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       195 ~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~----------------~~~~~~~~l~~~G~~v~~g  257 (347)
                      +++++ ++|++ ++|+++.+++.+.+++++++ ++|++|||+|..                .+..++++++++|+++.+|
T Consensus       223 ~~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G  300 (398)
T 1kol_A          223 LAHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG  300 (398)
T ss_dssp             HHHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred             HHHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence            99999 99997 78887652488889988876 899999999974                6899999999999999998


Q ss_pred             ccc-cccCCC------CccccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCCcc---cccceeeccccHHHH
Q 019042          258 MIS-QYNLEK------PEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV---YVEDIAEGLEKAPSA  327 (347)
Q Consensus       258 ~~~-~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~a  327 (347)
                      ... +.....      .....+...++.+++++.++...     ..+.++++++++++|+++   +.++++|+++++++|
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A  375 (398)
T 1kol_A          301 LYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRG  375 (398)
T ss_dssp             CCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-----HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHH
T ss_pred             cccCCcccccccccccccccccHHHHhhcccEEEecccC-----hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHH
Confidence            752 110000      01123455667788888875332     256788999999999998   467899999999999


Q ss_pred             HHHhHcCCCcceEEEEeCC
Q 019042          328 LVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       328 ~~~~~~~~~~gkivi~~~~  346 (347)
                      |+.+.+++. ||+||+++.
T Consensus       376 ~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          376 YGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HHHHHHTCS-CEEEECTTC
T ss_pred             HHHHhCCCc-eEEEEEeCC
Confidence            999998887 999998753

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.6e-48  Score=354.69  Aligned_cols=298  Identities=13%  Similarity=0.095  Sum_probs=253.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCccc---CCCCCCceeece
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVA---SFNPGEPLSGYG   85 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~---p~v~G~e~~g~G   85 (347)
                      |||++++++  +.+    ++++  ++|.|.| ++ +||||||+++|||++|++.+.|.+.. ..+   |.++|||  ++|
T Consensus         1 MkA~~~~~~--~~~----l~~~--~~p~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E--~~G   67 (357)
T 2b5w_A            1 MKAIAVKRG--EDR----PVVI--EKPRPEP-ES-GEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHE--AVG   67 (357)
T ss_dssp             CEEEEEETT--CSS----CEEE--ECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSE--EEE
T ss_pred             CeEEEEeCC--CCc----eEEE--ECCCCCC-Cc-CEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCce--eEE
Confidence            689999887  543    4555  4677766 77 99999999999999999988875322 345   8999999  778


Q ss_pred             EEEEecCCCCCCCCCCEEEec-----------------------------------cCcceeEeecCCCcceeccCCCCC
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL-----------------------------------TSWEEYSLIQSPQHLIKILDTNVP  130 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~-----------------------------------g~~~~~~~~~~~~~~~~i~P~~~~  130 (347)
                       |+++|++ ++|++||||++.                                   |+|+||++++++. ++++ |++++
T Consensus        68 -V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~~~  143 (357)
T 2b5w_A           68 -VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKY-LVRI-PRSQA  143 (357)
T ss_dssp             -EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGG-EEEC-CGGGS
T ss_pred             -EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHH-eEEC-CCCcc
Confidence             9999999 999999999853                                   7899999999999 9999 99954


Q ss_pred             ccccccccCCchhhHHHHhhhhcCCCCC------CEEEEEcCCChHHHHH-HHHH-HHCCCE-EEEEeCCHH---HHHHH
Q 019042          131 LSYYTGILGMPGLTAYGGLYELCSPKKG------EYVYVSAASGAVGQLV-GQFA-KLVGCY-VVGSAGSKE---KVNLL  198 (347)
Q Consensus       131 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~------~~vlI~ga~g~vG~~a-~qla-~~~G~~-V~~~~~~~~---~~~~~  198 (347)
                         ++|+++.+++|||+++ +.+++++|      ++|||+|+ |++|+++ +|+| +++|++ |++++++++   +++++
T Consensus       144 ---~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~  218 (357)
T 2b5w_A          144 ---ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII  218 (357)
T ss_dssp             ---TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH
T ss_pred             ---hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH
Confidence               5677999999999999 56789999      99999998 9999999 9999 999996 999999988   99999


Q ss_pred             HHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHH-
Q 019042          199 KNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQV-  276 (347)
Q Consensus       199 ~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-  276 (347)
                      + ++|++++ |+++. ++.+ ++++ ++++|++|||+|.. .+..++++++++|+++.+|.....     ....+...+ 
T Consensus       219 ~-~lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~  288 (357)
T 2b5w_A          219 E-ELDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDW-----AFEVDAGAFH  288 (357)
T ss_dssp             H-HTTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCC-----CCCCCHHHHH
T ss_pred             H-HcCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCC-----CceecHHHHh
Confidence            9 9999998 98876 7777 7777 55899999999985 889999999999999999975421     112344455 


Q ss_pred             ---HhccceeeeeEecccccchHHHHHHHHHHHHcC--C-cccccceeeccccHHHHHHHhHcCCCcceEEEEeCC
Q 019042          277 ---VGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEG--K-LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       277 ---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~~~  346 (347)
                         +.+++++.|+....     .+.++++++++++|  + +++.++++|+++++++|++.+   +..||+|+++++
T Consensus       289 ~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          289 REMVLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             HHHHhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence               78899999876654     67899999999999  8 688889999999999999988   457899999875

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.6e-48  Score=357.02  Aligned_cols=314  Identities=19%  Similarity=0.180  Sum_probs=257.5

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC-----------------
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK-----------------   68 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~-----------------   68 (347)
                      .++|||++....    +  .  .++..++|.|.| ++ +||||||++++||++|++.+.|.+.                 
T Consensus         5 ~~~mka~v~~~~----~--~--~l~~~~~~~P~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~   74 (379)
T 3iup_A            5 ALQLRSRIKSSG----E--L--ELSLDSIDTPHP-GP-DEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTA   74 (379)
T ss_dssp             EEEEEEEECTTS----E--E--EEEEEEEECCCC-CT-TEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEE
T ss_pred             hhhHHHHHhcCC----C--C--ceEEEeccCCCC-CC-CEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccc
Confidence            467899887432    1  1  355555777766 77 9999999999999999988877420                 


Q ss_pred             -----------CCcccCCCCCCceeeceEEEEecCCC-CCCCCCCEEEec--cCcceeEeecCCCcceeccCCCCCcccc
Q 019042           69 -----------PSFVASFNPGEPLSGYGVSKVLDSTH-PNYKKDDLVWGL--TSWEEYSLIQSPQHLIKILDTNVPLSYY  134 (347)
Q Consensus        69 -----------~~~~~p~v~G~e~~g~G~v~~vG~~v-~~~~vGd~V~~~--g~~~~~~~~~~~~~~~~i~P~~~~~~~~  134 (347)
                                 ....+|.++|||+  +|+|+++|++| +++++||+|++.  |+|+||++++++. ++++ |++++.. +
T Consensus        75 ~~p~~~~~~~~~~~~~p~i~G~e~--~G~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~  149 (379)
T 3iup_A           75 RVPEGAMRSMAGRLDASMPVGNEG--AGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQ-CLVL-PEGATPA-D  149 (379)
T ss_dssp             ECCHHHHHHHGGGTTEEEECCSCE--EEEEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGG-EEEC-CTTCCHH-H
T ss_pred             cCccccccccccccCCCccceeee--EEEEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHH-eEEC-CCCCCHH-H
Confidence                       0124689999995  55999999999 899999999998  8999999999999 9999 9996554 6


Q ss_pred             ccccCCchhhHHHHhhhhcCCCCCCEEEEEc-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          135 TGILGMPGLTAYGGLYELCSPKKGEYVYVSA-ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       135 aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g-a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      +|++++.++|||+++.. .. ++|++|||+| |+|++|++++|+|+..|++|++++++++++++++ ++|+++++|+++.
T Consensus       150 aa~l~~~~~ta~~~~~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~  226 (379)
T 3iup_A          150 GASSFVNPLTALGMVET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAASP  226 (379)
T ss_dssp             HTTSSHHHHHHHHHHHH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCEEETTST
T ss_pred             HHhhhhhHHHHHHHHHH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEEEeCCCh
Confidence            88999999999988755 44 8999999996 7899999999999999999999999999999999 9999999999887


Q ss_pred             hhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhcc-----C-----------CEEEEEcccccccCCCCccccchHH
Q 019042          214 PDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRI-----H-----------GRIAVCGMISQYNLEKPEGVHNLMQ  275 (347)
Q Consensus       214 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~-----~-----------G~~v~~g~~~~~~~~~~~~~~~~~~  275 (347)
                       ++.+.+++++++ ++|++|||+|+ ..+..++++++.     +           |+++.+|.....       ......
T Consensus       227 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~-------~~~~~~  298 (379)
T 3iup_A          227 -TFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS-------PTEFNR  298 (379)
T ss_dssp             -THHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE-------EEEECC
T ss_pred             -HHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC-------cccccc
Confidence             999999999877 89999999998 466888888864     3           666666654321       122334


Q ss_pred             HHhccceeeeeEeccc-----ccchHHHHHHHHHHHHcCCcccccceeeccccH--HHHHHHhHcCCCcceEEEEeCC
Q 019042          276 VVGKRIRMEGFLAGDF-----YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKA--PSALVGIFTGQNVGKQLVVVAP  346 (347)
Q Consensus       276 ~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~a~~~~~~~~~~gkivi~~~~  346 (347)
                      .+.+++++.|+....+     ++.+.+.++++.+++.+ .+++.++++|+++++  ++|++.+.+++..||+||+++.
T Consensus       299 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          299 NFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             CSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             ccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            4567899998876554     33445667888888887 588999999999999  9999999999999999999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=3.6e-47  Score=338.20  Aligned_cols=295  Identities=20%  Similarity=0.223  Sum_probs=246.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  +.|.    .++  ++|.|.| ++ +||+|||.++|+|++|++...|.+.....+|.++|||++|  +|+
T Consensus         1 Mka~~~~~~--g~~~----~l~--~~~~p~~-~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G--~V~   68 (302)
T 1iz0_A            1 MKAWVLKRL--GGPL----ELV--DLPEPEA-EE-GEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVG--VVE   68 (302)
T ss_dssp             CEEEEECST--TSCE----EEE--ECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEE--EET
T ss_pred             CeEEEEcCC--CCch----heE--ECCCCCC-CC-CEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEE--EEE
Confidence            589999888  7662    455  5777766 77 9999999999999999998887543333578999999554  775


Q ss_pred             EecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042           89 VLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                                 ||+|+++   |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.. +++|++|+|+|
T Consensus        69 -----------GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~G  133 (302)
T 1iz0_A           69 -----------GRRYAALVPQGGLAERVAVPKGA-LLPL-PEGLSPE-EAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQA  133 (302)
T ss_dssp             -----------TEEEEEECSSCCSBSEEEEEGGG-CEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHTT-CCTTCEEEESS
T ss_pred             -----------CcEEEEecCCcceeeEEEEcHHH-cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc-CCCCCEEEEEC
Confidence                       9999987   8999999999999 9999 9995544 58899999999999997667 99999999999


Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCC-hhhHHHHHHHHCCCCccEEEECCCchhHHHHH
Q 019042          166 ASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKK-EPDLDAALKRCFPEGIDIYFENVGGKMLDAVL  244 (347)
Q Consensus       166 a~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~  244 (347)
                      ++|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++ . ++.+.+     +++|++|| +|++.+..++
T Consensus       134 a~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid-~g~~~~~~~~  205 (302)
T 1iz0_A          134 AAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE-VRGKEVEESL  205 (302)
T ss_dssp             TTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE-CSCTTHHHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEECCcch-hHHHHh-----cCceEEEE-CCHHHHHHHH
Confidence            9999999999999999999999999999999998 899999999876 5 665554     46999999 9988999999


Q ss_pred             HhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHHHHHHHHH---HHHcCCcccccceeecc
Q 019042          245 LNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP---AIKEGKLVYVEDIAEGL  321 (347)
Q Consensus       245 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~  321 (347)
                      ++++++|+++.+|.....     ....+...++.+++++.|+....+ ....+.++++++   ++++|++++.++++|++
T Consensus       206 ~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  279 (302)
T 1iz0_A          206 GLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELRPVVGPVFPF  279 (302)
T ss_dssp             TTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEG
T ss_pred             HhhccCCEEEEEeCCCCC-----CCCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCcccccceEEcH
Confidence            999999999999875432     112345567789999998876432 223678899999   99999999999999999


Q ss_pred             ccHHHHHHHhHcCCCcceEEEEe
Q 019042          322 EKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       322 ~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      +++++|++.+.+++..||+++++
T Consensus       280 ~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          280 AEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             GGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999999888889999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=4.4e-47  Score=375.08  Aligned_cols=303  Identities=17%  Similarity=0.191  Sum_probs=257.6

Q ss_pred             CCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEEecCCCCCCCC
Q 019042           20 GFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKK   99 (347)
Q Consensus        20 ~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~vG~~v~~~~v   99 (347)
                      |.+  +.+++++.+.|.|.| ++ +||+|||+++|||++|++...|.+    +.|.++|||  ++|+|+++|++|++|++
T Consensus       219 G~~--~~L~~~~~~~p~~~~-~~-~eVlV~V~a~gin~~D~~~~~G~~----~~~~~lG~E--~aG~V~~vG~~V~~~~v  288 (795)
T 3slk_A          219 GSL--DGLALVDEPTATAPL-GD-GEVRIAMRAAGVNFRDALIALGMY----PGVASLGSE--GAGVVVETGPGVTGLAP  288 (795)
T ss_dssp             TSS--TTEEECCCHHHHSCC-CS-SEEEEEEEEEEECHHHHHHTTTCC----SSCCCSCCC--EEEEEEEECSSCCSSCT
T ss_pred             CCc--cceEEEeCCccCCCC-CC-CEEEEEEEEEccCHHHHHHHcCCC----CCCccccce--eEEEEEEeCCCCCcCCC
Confidence            666  566666655444544 77 999999999999999999888743    446789999  55599999999999999


Q ss_pred             CCEEEec--cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHH
Q 019042          100 DDLVWGL--TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQF  177 (347)
Q Consensus       100 Gd~V~~~--g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~ql  177 (347)
                      ||+|+++  |+|++|++++++. ++++ |++++.. ++|++++.++|||+++.+.+++++|++|||+|++|++|++++|+
T Consensus       289 GDrV~~~~~G~~ae~~~v~~~~-~~~i-P~~ls~~-~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiql  365 (795)
T 3slk_A          289 GDRVMGMIPKAFGPLAVADHRM-VTRI-PAGWSFA-RAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQL  365 (795)
T ss_dssp             TCEEEECCSSCSSSEEEEETTS-EEEC-CTTCCHH-HHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHH
T ss_pred             CCEEEEEecCCCcCEEEeehHH-EEEC-CCCCCHH-HHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHH
Confidence            9999987  8999999999999 9999 9995554 69999999999999998889999999999999999999999999


Q ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEE
Q 019042          178 AKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       178 a~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~  256 (347)
                      ||..|++|+++++++ +.+.+  ++|+++++|+++. ++.+.+++.|++ ++|+||||.|++.+..++++++++|+++.+
T Consensus       366 Ak~~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~i  441 (795)
T 3slk_A          366 ARHLGAEVYATASED-KWQAV--ELSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLEL  441 (795)
T ss_dssp             HHHTTCCEEEECCGG-GGGGS--CSCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEEC
T ss_pred             HHHcCCEEEEEeChH-Hhhhh--hcChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEe
Confidence            999999999999766 55555  3899999999887 999999999988 999999999999999999999999999999


Q ss_pred             cccccccCCCCccccchHHHHhccceeeeeEeccc-ccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCC
Q 019042          257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQ  335 (347)
Q Consensus       257 g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~  335 (347)
                      |.....       .........+++++.++..... +....+.++++++++++|++++.+.++|+++++++||+.+.+++
T Consensus       442 G~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~  514 (795)
T 3slk_A          442 GKTDVR-------DPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQAR  514 (795)
T ss_dssp             CSTTCC-------CHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTC
T ss_pred             cccccc-------CcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCC
Confidence            875321       1111122346777766654322 44557889999999999999999999999999999999999999


Q ss_pred             CcceEEEEeCC
Q 019042          336 NVGKQLVVVAP  346 (347)
Q Consensus       336 ~~gkivi~~~~  346 (347)
                      ..||+||++++
T Consensus       515 ~~GKvVl~~~~  525 (795)
T 3slk_A          515 HVGKLVLTMPP  525 (795)
T ss_dssp             CCBEEEEECCC
T ss_pred             ccceEEEecCc
Confidence            99999999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.1e-44  Score=330.50  Aligned_cols=300  Identities=14%  Similarity=0.111  Sum_probs=243.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccC--CCCCCccc---CCCCCCceee
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSK--LDKPSFVA---SFNPGEPLSG   83 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~--~~~~~~~~---p~v~G~e~~g   83 (347)
                      |||+++.++  +.+    +++++  +|.|.|..+ +||+|||.++|||++|++.+.|  .+. ...+   |.++|||++ 
T Consensus         1 MkA~~~~~~--g~~----l~~~~--~~~P~~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~~~p~v~G~E~~-   69 (366)
T 2cdc_A            1 MKAIIVKPP--NAG----VQVKD--VDEKKLDSY-GKIKIRTIYNGICGADREIVNGKLTLS-TLPKGKDFLVLGHEAI-   69 (366)
T ss_dssp             CEEEEECTT--SCC----CEEEE--CCGGGSCCC-SSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEEE-
T ss_pred             CeEEEEeCC--CCc----eEEEE--CcCCCCCCC-CEEEEEEEEEeeccccHHHHcCCCCCC-CCCcCCCCCcCCcceE-
Confidence            689999887  542    56654  566655343 8999999999999999998887  332 2345   899999955 


Q ss_pred             ceEEEEecCCCCCCCCCCEEEe---------------------------------ccCcceeEeecCCCcceeccCCCCC
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWG---------------------------------LTSWEEYSLIQSPQHLIKILDTNVP  130 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~---------------------------------~g~~~~~~~~~~~~~~~~i~P~~~~  130 (347)
                       |+|++  ++ ++|++||||++                                 .|+|+||++++++. ++++ |++++
T Consensus        70 -G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~l~  143 (366)
T 2cdc_A           70 -GVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKY-LVKI-PKSIE  143 (366)
T ss_dssp             -EEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGG-EEEE-CGGGT
T ss_pred             -EEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHH-eEEC-cCCcc
Confidence             59988  77 89999999984                                 27899999999999 9999 99955


Q ss_pred             ccccccccCCchhhHHHHhh--h--hcCCC--C-------CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH---HH
Q 019042          131 LSYYTGILGMPGLTAYGGLY--E--LCSPK--K-------GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---EK  194 (347)
Q Consensus       131 ~~~~aa~l~~~~~tA~~~l~--~--~~~~~--~-------~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~---~~  194 (347)
                         +.|+++.++.|||+++.  +  ..+++  +       |++|+|+|+ |++|++++|+|+..|++|+++++++   ++
T Consensus       144 ---~~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~  219 (366)
T 2cdc_A          144 ---DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVE  219 (366)
T ss_dssp             ---TTGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHH
T ss_pred             ---hhhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHH
Confidence               44568899999999997  3  67888  8       999999998 9999999999999999999999998   88


Q ss_pred             HHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch-hH-HHHHHhhccCCEEEEEcccccccCCCCccccc
Q 019042          195 VNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-ML-DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHN  272 (347)
Q Consensus       195 ~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  272 (347)
                      +++++ ++|++++ | ++  ++.+.+.+ +++++|++||++|.. .+ +.++++++++|+++.+|.....     ....+
T Consensus       220 ~~~~~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~  288 (366)
T 2cdc_A          220 QTVIE-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG-----SVPLD  288 (366)
T ss_dssp             HHHHH-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSC-----EEEEE
T ss_pred             HHHHH-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCC-----ccccC
Confidence            89998 9999887 7 44  55556665 445799999999984 77 8999999999999999875421     12344


Q ss_pred             hHH---HHhccceeeeeEecccccchHHHHHHHHHHHHcCC------cccccceeeccccHHHHHHHh-HcCCCcceEEE
Q 019042          273 LMQ---VVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGK------LVYVEDIAEGLEKAPSALVGI-FTGQNVGKQLV  342 (347)
Q Consensus       273 ~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~~-~~~~~~gkivi  342 (347)
                      ...   ++.+++++.|+....     .+.++++++++++|+      +++.++++|+++++++||+.+ .+++..||+||
T Consensus       289 ~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi  363 (366)
T 2cdc_A          289 YKTLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRI  363 (366)
T ss_dssp             HHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEE
T ss_pred             hhhhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEE
Confidence            555   778999999876543     678999999999999      567788999999999999994 34667899999


Q ss_pred             EeC
Q 019042          343 VVA  345 (347)
Q Consensus       343 ~~~  345 (347)
                      +++
T Consensus       364 ~~~  366 (366)
T 2cdc_A          364 LWE  366 (366)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=4.2e-35  Score=317.19  Aligned_cols=283  Identities=21%  Similarity=0.220  Sum_probs=237.4

Q ss_pred             CCCeEEEEEEEeecChhccccccCCCCCC------cccCCCCCCceeeceEEEEecCCCCCCCCCCEEEec---cCccee
Q 019042           42 SKDTVLLKNLYLSCDPYMRGRMSKLDKPS------FVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEY  112 (347)
Q Consensus        42 ~~~evlikv~~~~i~~~d~~~~~~~~~~~------~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~---g~~~~~  112 (347)
                      + +||+|||.++|+|+.|+....|.....      ...|.++|+|++|  +|          ++||+|+++   |+|++|
T Consensus      1559 ~-~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG--~V----------~vGdrV~g~~~~G~~Aey 1625 (2512)
T 2vz8_A         1559 C-QDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSG--RD----------ASGRRVMGMVPAEGLATS 1625 (2512)
T ss_dssp             H-HTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEE--EE----------TTSCCEEEECSSCCSBSE
T ss_pred             C-CceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEE--EE----------ccCCEEEEeecCCceeeE
Confidence            5 899999999999999998887754211      1235789999554  65          389999987   789999


Q ss_pred             EeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          113 SLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       113 ~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      ++++++. ++++ |++++.. ++|++++.++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++
T Consensus      1626 v~vp~~~-v~~i-Pd~ls~~-eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~ 1702 (2512)
T 2vz8_A         1626 VLLLQHA-TWEV-PSTWTLE-EAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSA 1702 (2512)
T ss_dssp             EECCGGG-EEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             EEcccce-EEEe-CCCCCHH-HHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCCh
Confidence            9999999 9999 9995554 68899999999999998888999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCc
Q 019042          193 EKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPE  268 (347)
Q Consensus       193 ~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  268 (347)
                      ++.+++++.   +|+++++|+++. ++.+.+.+.+++ ++|+||||.+++.+..++++++++|+++.+|......     
T Consensus      1703 ~k~~~l~~~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~----- 1776 (2512)
T 2vz8_A         1703 EKRAYLQARFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSN----- 1776 (2512)
T ss_dssp             HHHHHHHHHCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHT-----
T ss_pred             hhhHHHHhhcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccc-----
Confidence            999999842   678899999887 899999999887 8999999999889999999999999999998643221     


Q ss_pred             cccchHHHHhccceeeeeEeccc----ccchHHHHHHHHHHHHcCCcccccceeeccccHHHHHHHhHcCCCcceEEEEe
Q 019042          269 GVHNLMQVVGKRIRMEGFLAGDF----YHQYPKFLELVMPAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVV  344 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkivi~~  344 (347)
                      ........+.+++++.++....+    +..+.+.++.+.+++.+|.+++.++++|+++++++|++.+.+++..||+|+++
T Consensus      1777 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1777 NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             TCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEEC
T ss_pred             cCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEEC
Confidence            01122345678899988766443    23345566666677778999999999999999999999999999999999998


Q ss_pred             CC
Q 019042          345 AP  346 (347)
Q Consensus       345 ~~  346 (347)
                      ++
T Consensus      1857 ~~ 1858 (2512)
T 2vz8_A         1857 RE 1858 (2512)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.91  E-value=1.1e-23  Score=175.17  Aligned_cols=189  Identities=21%  Similarity=0.320  Sum_probs=144.7

Q ss_pred             ceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Q 019042          121 LIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN  200 (347)
Q Consensus       121 ~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~  200 (347)
                      ++++ |++++.. ++|++++++.|||+++.+..++++|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ 
T Consensus         4 ~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-   80 (198)
T 1pqw_A            4 VVPI-PDTLADN-EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-   80 (198)
T ss_dssp             -----------C-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-
T ss_pred             eeEC-CCCCCHH-HHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            8899 9995554 688888999999999977789999999999999999999999999999999999999999988888 


Q ss_pred             HhCCCeeEecCChhhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhc
Q 019042          201 KFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGK  279 (347)
Q Consensus       201 ~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      ++|++.++|+.+. ++.+.+.+.+.+ ++|++|||.|...+..++++++++|+++.+|......    ....+. ..+.+
T Consensus        81 ~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~-~~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DASLGL-AALAK  154 (198)
T ss_dssp             TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TCEEEG-GGGTT
T ss_pred             HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cCcCCh-hHhcC
Confidence            8999888898876 788888887765 8999999999889999999999999999999754211    111222 23467


Q ss_pred             cceeeeeEecc----cccchHHHHHHHHHHHHcCCccccccee
Q 019042          280 RIRMEGFLAGD----FYHQYPKFLELVMPAIKEGKLVYVEDIA  318 (347)
Q Consensus       280 ~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~  318 (347)
                      ++++.++....    .+....+.++++++++++|++++.+.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            88877653311    1122357899999999999999876544

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.91  E-value=6.9e-09  Score=93.57  Aligned_cols=145  Identities=14%  Similarity=0.049  Sum_probs=98.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +++|+|+|+ |++|+++++.++..|++|+++++++++.+.++ ++++..  +++.+.. ++.+.+.     ++|++|+|+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence            489999997 99999999999999999999999999999888 666543  3444333 5555554     499999999


Q ss_pred             Cchh-------HHHHHHhhccCCEEEEEcccccccCCCC-ccccchHHHHhccceeeeeEecc--cc----cch-HHHHH
Q 019042          236 GGKM-------LDAVLLNMRIHGRIAVCGMISQYNLEKP-EGVHNLMQVVGKRIRMEGFLAGD--FY----HQY-PKFLE  300 (347)
Q Consensus       236 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~--~~----~~~-~~~~~  300 (347)
                      +...       ....++.++++|+++.++...+...... ...++...+..+++++.+...-.  ++    ..+ +..++
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~  318 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP  318 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence            7632       5778899999999999987543211000 11222223345667766643211  11    112 34567


Q ss_pred             HHHHHHHcCC
Q 019042          301 LVMPAIKEGK  310 (347)
Q Consensus       301 ~~~~~~~~g~  310 (347)
                      .+++++++|.
T Consensus       319 ~l~~l~~~G~  328 (361)
T 1pjc_A          319 YVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHhCCc
Confidence            8888888874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.83  E-value=2.1e-10  Score=105.03  Aligned_cols=165  Identities=15%  Similarity=0.066  Sum_probs=117.8

Q ss_pred             CCCceeeceEEEEecCCCCCCCCCCEEEe------------ccCcceeEeecCCCcceeccCCCCCccccccccCCchhh
Q 019042           77 PGEPLSGYGVSKVLDSTHPNYKKDDLVWG------------LTSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLT  144 (347)
Q Consensus        77 ~G~e~~g~G~v~~vG~~v~~~~vGd~V~~------------~g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~t  144 (347)
                      .|++  +.+.+..+|.++.++.+|+.++.            .|++++|+...... ++++ |++  +..+.+....+..+
T Consensus        77 ~g~~--a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~-a~~~-~k~--v~~~~~~~~~~~s~  150 (404)
T 1gpj_A           77 RGSE--AVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRR-AINL-GKR--AREETRISEGAVSI  150 (404)
T ss_dssp             EHHH--HHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH-HHHH-HHH--HHHHSSTTCSCCSH
T ss_pred             cCch--HhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHH-Hhhh-hcc--CcchhhhcCCCccH
Confidence            4556  45688889999999999998731            16788888777777 8888 887  33333344556678


Q ss_pred             HHHHhhhhc---CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHhCCCeeEecCChhhHHHH
Q 019042          145 AYGGLYELC---SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKV-NLLKNKFGFDDAFNYKKEPDLDAA  219 (347)
Q Consensus       145 A~~~l~~~~---~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~  219 (347)
                      +|.++....   .-.+|++|+|+|+ |++|.++++.++..|+ +|+++.++.++. ++++ ++|+. ++++.   ++.+.
T Consensus       151 a~~av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~-~~g~~-~~~~~---~l~~~  224 (404)
T 1gpj_A          151 GSAAVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR-DLGGE-AVRFD---ELVDH  224 (404)
T ss_dssp             HHHHHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-HHTCE-ECCGG---GHHHH
T ss_pred             HHHHHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCCc-eecHH---hHHHH
Confidence            887764322   1257999999996 9999999999999999 999999999886 5566 88875 34442   44444


Q ss_pred             HHHHCCCCccEEEECCCch-hH--HHHHHh--h--ccCCEEEEEcc
Q 019042          220 LKRCFPEGIDIYFENVGGK-ML--DAVLLN--M--RIHGRIAVCGM  258 (347)
Q Consensus       220 i~~~~~~~~d~vid~~g~~-~~--~~~~~~--l--~~~G~~v~~g~  258 (347)
                      +.     ++|+|++|++.. .+  ...+..  +  +++|.++.++.
T Consensus       225 l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdi  265 (404)
T 1gpj_A          225 LA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDI  265 (404)
T ss_dssp             HH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred             hc-----CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEc
Confidence            43     489999999863 22  234554  4  55676666665

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.80  E-value=7.2e-08  Score=87.19  Aligned_cols=148  Identities=16%  Similarity=0.078  Sum_probs=93.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++++|+|+|+ |++|+.+++.++..|++|+++++++++.+.+++.+|.....+..+..++.+.+.     ++|++++|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence            4689999997 999999999999999999999999999888873477753344433325555554     3899999998


Q ss_pred             chh-------HHHHHHhhccCCEEEEEcccccccCCCC-ccccchHHHHhccceeeeeEec--cccc----c-hHHHHHH
Q 019042          237 GKM-------LDAVLLNMRIHGRIAVCGMISQYNLEKP-EGVHNLMQVVGKRIRMEGFLAG--DFYH----Q-YPKFLEL  301 (347)
Q Consensus       237 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~--~~~~----~-~~~~~~~  301 (347)
                      ...       ....++.++++|+++.++...+...+.. ....+...+..+++++.+...-  .++.    . ..+.++.
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~  318 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY  318 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence            642       5788899999999999987543211000 0112222333466766654311  1111    1 1455778


Q ss_pred             HHHHHHcCC
Q 019042          302 VMPAIKEGK  310 (347)
Q Consensus       302 ~~~~~~~g~  310 (347)
                      +.+++.+|.
T Consensus       319 l~~l~~~g~  327 (369)
T 2eez_A          319 VLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhcCh
Confidence            888888774

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.80  E-value=4.6e-08  Score=88.63  Aligned_cols=98  Identities=18%  Similarity=0.142  Sum_probs=77.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++++|+|+|+ |++|+.+++.++..|++|++.++++++++.+++.+|+....++....++.+.+.     ++|+|++|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence            5899999997 999999999999999999999999999888873478754333333225555444     3899999987


Q ss_pred             chh-------HHHHHHhhccCCEEEEEcccc
Q 019042          237 GKM-------LDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       237 ~~~-------~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      .+.       ....++.++++|.++.++...
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCC
Confidence            542       578889999999999998643

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.58  E-value=5e-08  Score=88.68  Aligned_cols=145  Identities=14%  Similarity=0.085  Sum_probs=92.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-EecCCh--------------hh----HH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-FNYKKE--------------PD----LD  217 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~--------------~~----~~  217 (347)
                      ++++|+|+|+ |.+|++++++++.+|++|++.++++++.+.++ ++|+..+ ++..+.              .+    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            6899999995 99999999999999999999999988888888 7998654 232110              00    11


Q ss_pred             HHHHHHCCCCccEEEECC---Cch---h-HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          218 AALKRCFPEGIDIYFENV---GGK---M-LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      +.+.+... ++|+||+|+   |..   . ....++.|++++.++.++...+.....   ..+...+..+++++.++... 
T Consensus       249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~---~~~~~~~~~~~v~i~g~~~~-  323 (384)
T 1l7d_A          249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPL---SEPGKIVVKHGVKIVGHTNV-  323 (384)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTT---CCTTCEEEETTEEEECCSSG-
T ss_pred             HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeec---ccCCcEEEECCEEEEEeCCC-
Confidence            22333332 599999999   532   2 377889999999999998754321111   01111234567777775432 


Q ss_pred             cccchHHHHHHHHHHHHcCCcc
Q 019042          291 FYHQYPKFLELVMPAIKEGKLV  312 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~~~  312 (347)
                       +..   ....+.+++.++.+.
T Consensus       324 -p~~---~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          324 -PSR---VAADASPLFAKNLLN  341 (384)
T ss_dssp             -GGG---GHHHHHHHHHHHHHH
T ss_pred             -cch---hHHHHHHHHHHhHHH
Confidence             221   123355555555443

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.53  E-value=3.4e-07  Score=85.05  Aligned_cols=105  Identities=19%  Similarity=0.199  Sum_probs=82.6

Q ss_pred             chhhHHHHhhhhc-CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHH
Q 019042          141 PGLTAYGGLYELC-SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAA  219 (347)
Q Consensus       141 ~~~tA~~~l~~~~-~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  219 (347)
                      ...++|+++.+.. ...+|++|+|+|. |.+|+.+++.++..|++|+++++++.+.+.++ ++|++ ++      ++.+.
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~------~l~e~  326 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VV------TVEEA  326 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHH
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Ee------cHHHH
Confidence            3456666664332 2678999999995 99999999999999999999999999888888 88875 22      22222


Q ss_pred             HHHHCCCCccEEEECCCch-hHH-HHHHhhccCCEEEEEccc
Q 019042          220 LKRCFPEGIDIYFENVGGK-MLD-AVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       220 i~~~~~~~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~  259 (347)
                      +     .++|+|++|++.. .+. ..++.++++|+++.+|..
T Consensus       327 l-----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          327 I-----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             G-----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             H-----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            2     2489999999874 455 788999999999999874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.43  E-value=1.3e-06  Score=75.13  Aligned_cols=107  Identities=15%  Similarity=0.198  Sum_probs=79.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      -+|++++|+||++|+|.+.++.+...|++|+++.+++++++.+.+++|...   ..|..+.++..+.+.+...  |++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            368999999999999999999999999999999999998887766887642   2344444344433333322  36999


Q ss_pred             EEECCCch--------------------------hHHHHHHhhccCCEEEEEcccccc
Q 019042          231 YFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMISQY  262 (347)
Q Consensus       231 vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~  262 (347)
                      +++++|..                          ..+.++..|+.+|++|.+++..+.
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~  164 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS  164 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc
Confidence            99999831                          124566678889999999876543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.41  E-value=6.2e-07  Score=81.73  Aligned_cols=124  Identities=16%  Similarity=0.138  Sum_probs=83.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-EecC-------------ChhhH----HH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-FNYK-------------KEPDL----DA  218 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~-------------~~~~~----~~  218 (347)
                      ++++|+|+|+ |.+|+.++++++.+|++|++++++.++++.++ ++|+..+ ++..             .. ++    .+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~  247 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSD-AFIKAEME  247 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSH-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccH-HHHHHHHH
Confidence            5889999996 99999999999999999999999999888887 8888643 1211             11 11    11


Q ss_pred             HHHHHCCCCccEEEECC---Cc---hh-HHHHHHhhccCCEEEEEcccccccCCCCccccchH-HHHhccceeeeeE
Q 019042          219 ALKRCFPEGIDIYFENV---GG---KM-LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLM-QVVGKRIRMEGFL  287 (347)
Q Consensus       219 ~i~~~~~~~~d~vid~~---g~---~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~  287 (347)
                      .+.+... ++|+||+|+   |.   .. ....++.|++++.++.++...+......   .... .+..+++++.|..
T Consensus       248 ~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~---~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          248 LFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYT---VPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTC---CTTSEEECTTSCEEECCS
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcc---cCCCceEEECCEEEEeeC
Confidence            2333222 489999995   32   12 3678899999999999987533221110   0111 1345778888754

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.23  E-value=1.6e-06  Score=73.66  Aligned_cols=100  Identities=14%  Similarity=0.118  Sum_probs=72.6

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC-C-
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF-P-  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~-~-  225 (347)
                      ....+.++++||..|+ | .|..+.++++. +.+|++++.+++..+.+++.   .+...-+..... |+.+    .. . 
T Consensus        85 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~----~~~~~  156 (248)
T 2yvl_A           85 LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-DFKD----AEVPE  156 (248)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-CTTT----SCCCT
T ss_pred             HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-Chhh----cccCC
Confidence            4568889999999995 5 79999999998 88999999999988888733   243111111111 2211    12 2 


Q ss_pred             CCccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+|+|+.+.+.  ..+..+.+.|+++|+++....
T Consensus       157 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          157 GIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             TCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             CcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            379999988775  478999999999999987754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.20  E-value=1.7e-06  Score=67.10  Aligned_cols=107  Identities=10%  Similarity=0.059  Sum_probs=75.8

Q ss_pred             hhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHH
Q 019042          142 GLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALK  221 (347)
Q Consensus       142 ~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~  221 (347)
                      ..+++.++.. .....+++|+|+|+ |.+|.+.++.++..|++|++..+++++.+.+.++++.. +..+.   ++.+.+.
T Consensus         6 ~sv~~~a~~~-~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~---~~~~~~~   79 (144)
T 3oj0_A            6 VSIPSIVYDI-VRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN---DIDSLIK   79 (144)
T ss_dssp             CSHHHHHHHH-HHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS---CHHHHHH
T ss_pred             ccHHHHHHHH-HHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec---CHHHHhc
Confidence            3556666633 33344899999995 99999999999889999999999998877655478853 23333   4444443


Q ss_pred             HHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          222 RCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       222 ~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                           ++|+|+.|++..........+++++.++.++.+
T Consensus        80 -----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           80 -----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             -----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             -----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence                 389999999874211122678889999988764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.18  E-value=9.3e-06  Score=69.36  Aligned_cols=105  Identities=13%  Similarity=0.137  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999999988877765665431   2344443233333332211  369999


Q ss_pred             EECCCch-----------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          232 FENVGGK-----------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       232 id~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +.++|..           .               .+.+...++.+|++|.+++...
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            9998731           1               1334445567899999987554

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.10  E-value=1.6e-05  Score=67.71  Aligned_cols=105  Identities=19%  Similarity=0.241  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +|++++|+||++|+|.+.++.+...|++|+++.+++++.+.+.++   .|...   ..|..++++..+.+.+...  +++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            589999999999999999999999999999999998876555433   34321   2344454344444444332  379


Q ss_pred             cEEEECCCch--------------------------hHHHHHHhhc---cCCEEEEEccccc
Q 019042          229 DIYFENVGGK--------------------------MLDAVLLNMR---IHGRIAVCGMISQ  261 (347)
Q Consensus       229 d~vid~~g~~--------------------------~~~~~~~~l~---~~G~~v~~g~~~~  261 (347)
                      |++++++|..                          ..+.++..|.   .+|++|.+++..+
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~  149 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS  149 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence            9999999831                          1244555562   4689999987654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.06  E-value=4.7e-05  Score=65.06  Aligned_cols=81  Identities=16%  Similarity=0.252  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +++++||+||+|++|...++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999999988777665666532   2344444234433433221  369999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.++|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.05  E-value=3.5e-05  Score=66.17  Aligned_cols=81  Identities=22%  Similarity=0.324  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||+|++|.+.++.+...|++|+++.++.++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999988777665676532   2344443233333333221  369999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.++|.
T Consensus       106 vnnAg~  111 (266)
T 3grp_A          106 VNNAGI  111 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.04  E-value=1.2e-05  Score=71.82  Aligned_cols=104  Identities=18%  Similarity=0.111  Sum_probs=75.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeE-e--------cCC---hh---hHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAF-N--------YKK---EP---DLDAALK  221 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~--------~~~---~~---~~~~~i~  221 (347)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.++++++++.++ ++|+..+- +        |..   .+   ...+.+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            6789999996 99999999999999999999999999999998 88875321 1        000   00   0011222


Q ss_pred             HHCCCCccEEEECCCc---h----hHHHHHHhhccCCEEEEEccccccc
Q 019042          222 RCFPEGIDIYFENVGG---K----MLDAVLLNMRIHGRIAVCGMISQYN  263 (347)
Q Consensus       222 ~~~~~~~d~vid~~g~---~----~~~~~~~~l~~~G~~v~~g~~~~~~  263 (347)
                      +.. ..+|+||.++..   .    .-...++.+++++.+|.++...+.+
T Consensus       261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~  308 (381)
T 3p2y_A          261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGN  308 (381)
T ss_dssp             HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCS
T ss_pred             HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCc
Confidence            222 259999998622   1    2478889999999999998765543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.03  E-value=2.8e-05  Score=70.10  Aligned_cols=103  Identities=16%  Similarity=0.105  Sum_probs=74.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEe-------------cCCh--hhH----H
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFN-------------YKKE--PDL----D  217 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~-------------~~~~--~~~----~  217 (347)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++.++++++++.++ ++|+..+-.             |..+  +++    .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            5789999996 99999999999999999999999999999998 788753211             1100  011    1


Q ss_pred             HHHHHHCCCCccEEEECCCc-----h--hHHHHHHhhccCCEEEEEcccccc
Q 019042          218 AALKRCFPEGIDIYFENVGG-----K--MLDAVLLNMRIHGRIAVCGMISQY  262 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~  262 (347)
                      +.+.+.. .++|+||.|+..     .  .-...++.++++..+|.++...+.
T Consensus       267 ~~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG  317 (405)
T 4dio_A          267 ALVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGG  317 (405)
T ss_dssp             HHHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTC
T ss_pred             hHHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCC
Confidence            1222221 148999999631     1  347888999999999999875443

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.03  E-value=4.5e-05  Score=65.92  Aligned_cols=105  Identities=20%  Similarity=0.268  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. .  ..|..+.++..+.+.+...  +++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999999999998877766566643 1  2344454233333333221  369999


Q ss_pred             EECCCch-----------h---------------HHHHHHhh--ccCCEEEEEccccc
Q 019042          232 FENVGGK-----------M---------------LDAVLLNM--RIHGRIAVCGMISQ  261 (347)
Q Consensus       232 id~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  261 (347)
                      |.++|..           .               .+.++..+  +.+|++|.+++...
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  165 (277)
T 3gvc_A          108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG  165 (277)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh
Confidence            9998831           1               23344444  44689999887554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.01  E-value=4.8e-05  Score=56.21  Aligned_cols=92  Identities=16%  Similarity=0.182  Sum_probs=63.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +.+|+|+|+ |.+|...++.+...| .+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||+|+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~~   77 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKALG-GFDAVISAA   77 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHTT-TCSEEEECS
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHHc-CCCEEEECC
Confidence            468999998 999999999999999 79999999999888777 566542 2334332    23333332 599999999


Q ss_pred             CchhHHHHHH-hhccCCEEEEE
Q 019042          236 GGKMLDAVLL-NMRIHGRIAVC  256 (347)
Q Consensus       236 g~~~~~~~~~-~l~~~G~~v~~  256 (347)
                      +......... +.+.+-.++.+
T Consensus        78 ~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           78 PFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             CGGGHHHHHHHHHHTTCEEECC
T ss_pred             CchhhHHHHHHHHHhCCCEEEe
Confidence            8754334444 44445555443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.00  E-value=5.3e-05  Score=64.91  Aligned_cols=81  Identities=10%  Similarity=0.106  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. .  ..|..+.+++.+.+.+...  +.+|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4679999999999999999999999999999999988877665455432 1  2344444234333333221  368999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.+.|.
T Consensus        85 vnnAg~   90 (263)
T 2a4k_A           85 AHFAGV   90 (263)
T ss_dssp             EEGGGG
T ss_pred             EECCCC
Confidence            999873

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.00  E-value=3e-05  Score=67.23  Aligned_cols=81  Identities=16%  Similarity=0.218  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|+++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++    +.. .  ..|..+.+++.+.+.+...  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999988766554333    111 1  2344554234443333321  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.99  E-value=4.6e-05  Score=65.63  Aligned_cols=81  Identities=15%  Similarity=0.171  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+.+++.+.+.+...  +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999999999888766665466653   22455554234333333221  369999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      +.++|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.98  E-value=4.6e-05  Score=65.66  Aligned_cols=81  Identities=17%  Similarity=0.185  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. .  ..|..+.+++.+.+.+...  +++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999998877766566542 1  2344444234333333221  369999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.++|.
T Consensus       107 VnnAg~  112 (272)
T 4dyv_A          107 FNNAGT  112 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.95  E-value=4.8e-05  Score=64.94  Aligned_cols=105  Identities=9%  Similarity=0.085  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCC--e--eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFD--D--AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~--~--vi~~~~~~~~~~~i~~~~~--  225 (347)
                      +|++++|+||+|  |+|.+.++.+...|++|+++.++++..+.+.+   +++..  .  ..|..+.++..+.+.+...  
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            589999999876  89999999999999999999998776555442   33432  1  2344444244333333221  


Q ss_pred             CCccEEEECCCch---------------hH---------------HHHHHhhccCCEEEEEccccc
Q 019042          226 EGIDIYFENVGGK---------------ML---------------DAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       226 ~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +++|+++++.|..               .+               ..+...++.+|++|.+++..+
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            3699999988721               11               223445677899999987654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.94  E-value=0.00012  Score=62.69  Aligned_cols=105  Identities=18%  Similarity=0.135  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-----C-e--eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-----D-D--AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-----~-~--vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++..     . .  ..|..+.+++.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998776544323321     1 1  2344443234443333221  3


Q ss_pred             CccEEEECCCc---hh---------------HHHHHHhhcc-----CCEEEEEccccc
Q 019042          227 GIDIYFENVGG---KM---------------LDAVLLNMRI-----HGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  261 (347)
                      ++|++|.++|.   +.               .+.++..++.     .|++|.+++...
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  143 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence            68999999983   11               1234445543     589999887544

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.94  E-value=6.9e-05  Score=63.77  Aligned_cols=81  Identities=17%  Similarity=0.176  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46799999999999999999999999999999999887776654665421   1344443234333333221  368999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.++|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.94  E-value=6.2e-05  Score=64.33  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCC-e--eEecCChhhHHHHHHHHCCC-C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF-----GFD-D--AFNYKKEPDLDAALKRCFPE-G  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~--vi~~~~~~~~~~~i~~~~~~-~  227 (347)
                      ++++++|+|++|++|...++.+...|++|+++++++++.+.+.+++     +.. .  ..|..+.+++.+.+.+.... +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4679999999999999999999999999999999987766554333     311 1  23444442444444433322 3


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        86 id~lv~~Ag   94 (260)
T 2z1n_A           86 ADILVYSTG   94 (260)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.93  E-value=6.4e-05  Score=64.30  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+||+|++|...++.+...|++|++++++.++.+.+.+++...   ...|..+.+++.+.+.+...  +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999999988776655344321   12344444234444433221  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        86 v~~Ag   90 (260)
T 1nff_A           86 VNNAG   90 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.92  E-value=5.6e-05  Score=68.36  Aligned_cols=102  Identities=21%  Similarity=0.173  Sum_probs=76.2

Q ss_pred             hHHHHhhhhc-CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHH
Q 019042          144 TAYGGLYELC-SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       144 tA~~~l~~~~-~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~  222 (347)
                      ..+.++.+.. ..-.|++|+|.|. |.+|..+++.++..|++|+++.+++.+...+. ..|.. +.      ++.+.+. 
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~-v~------~Leeal~-  274 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFR-LV------KLNEVIR-  274 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTT-
T ss_pred             HHHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCE-ec------cHHHHHh-
Confidence            4445554433 3457999999995 99999999999999999999999887766665 56642 21      3333332 


Q ss_pred             HCCCCccEEEECCCch-hHH-HHHHhhccCCEEEEEccc
Q 019042          223 CFPEGIDIYFENVGGK-MLD-AVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       223 ~~~~~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~  259 (347)
                          ..|+++.|.|.. .+. ..+..|++++.++.+|..
T Consensus       275 ----~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg  309 (435)
T 3gvp_A          275 ----QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHS  309 (435)
T ss_dssp             ----TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSST
T ss_pred             ----cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCC
Confidence                489999998863 444 788999999999998763

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.91  E-value=4.3e-05  Score=66.04  Aligned_cols=100  Identities=14%  Similarity=0.089  Sum_probs=72.5

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCc
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      .++++++++||.+| +|+.+..++.+++..|++|++++.+++..+.+++.   .|.+. +..... |..+    +..+.|
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~-v~~v~g-Da~~----l~d~~F  189 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDG-VNVITG-DETV----IDGLEF  189 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCS-EEEEES-CGGG----GGGCCC
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCC-eEEEEC-chhh----CCCCCc
Confidence            46889999999999 57777777888888899999999999988888732   35422 222111 2211    222479


Q ss_pred             cEEEECCCc----hhHHHHHHhhccCCEEEEEcc
Q 019042          229 DIYFENVGG----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       229 d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |+|+.+...    ..+....+.|+|||+++....
T Consensus       190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            999976543    378889999999999997654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.91  E-value=0.00012  Score=64.10  Aligned_cols=80  Identities=20%  Similarity=0.308  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +|++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +..   ...|..+.+++.+.+.+...  +++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999999988776654333   332   12444454234433333321  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus       110 d~lvnnAg  117 (301)
T 3tjr_A          110 DVVFSNAG  117 (301)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.91  E-value=7.5e-05  Score=64.69  Aligned_cols=104  Identities=21%  Similarity=0.293  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHH----HHHHhCCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-VNL----LKNKFGFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-~~~----~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++ .+.    ++ +.|...   ..|..+.+++.+.+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999987543 222    23 335421   2344443233333333221  3


Q ss_pred             CccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ++|++|.++|..                          ..+.+...++.+|++|.+++...
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            699999998731                          11344555666799999987544

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.91  E-value=0.00011  Score=62.98  Aligned_cols=82  Identities=13%  Similarity=0.169  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      -++++++|+|+++++|.+.++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999988766654333   332 1  2344554234433333321  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999999863

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.91  E-value=3.2e-05  Score=65.74  Aligned_cols=106  Identities=23%  Similarity=0.308  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +|++++|+||++|+|.+.++.+...|++|+++.+++++++.+.++   .|...   ..|..+.++..+.+.+...  +++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            588999999999999999999999999999999999877655433   34432   2344454344443333322  369


Q ss_pred             cEEEECCCc--h----------h---------------HHHHHHhhcc--CCEEEEEcccccc
Q 019042          229 DIYFENVGG--K----------M---------------LDAVLLNMRI--HGRIAVCGMISQY  262 (347)
Q Consensus       229 d~vid~~g~--~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~  262 (347)
                      |++++++|.  .          .               .+.++..|+.  +|++|.+++..+.
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~  148 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI  148 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc
Confidence            999999872  1          0               1445555533  6899999876543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.90  E-value=4.3e-05  Score=64.81  Aligned_cols=80  Identities=20%  Similarity=0.236  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            47899999999999999999999999999999999988777665666532   2344444233333333221  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        85 v~nAg   89 (247)
T 3rwb_A           85 VNNAS   89 (247)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.89  E-value=0.00013  Score=62.41  Aligned_cols=81  Identities=21%  Similarity=0.290  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.++||+||+|++|...++.+...|++|++++++.++.+.+.+++   +..   ...|..+.+++.+.+.+...  +.+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999988766554333   332   12344444234333333221  369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.++|.
T Consensus       108 d~lv~~Ag~  116 (262)
T 3rkr_A          108 DVLVNNAGV  116 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999884

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.89  E-value=0.0001  Score=63.80  Aligned_cols=81  Identities=14%  Similarity=0.151  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC--e----eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD--D----AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~--~----vi~~~~~~~~~~~i~~~~~--  225 (347)
                      .+++++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +..  .    ..|..+.+++.+.+.+...  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999988765554333   320  1    1344444234444433321  


Q ss_pred             CCccEEEECCCc
Q 019042          226 EGIDIYFENVGG  237 (347)
Q Consensus       226 ~~~d~vid~~g~  237 (347)
                      +++|+++.++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999999984

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.89  E-value=0.00012  Score=63.10  Aligned_cols=102  Identities=19%  Similarity=0.282  Sum_probs=71.8

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....+.++++||-.|+ |. |..++.+++..  +.+|++++.+++..+.+++.+   +...-+..... |+.+.   +..
T Consensus       106 ~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~~  179 (277)
T 1o54_A          106 MMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---FDE  179 (277)
T ss_dssp             HHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---CSC
T ss_pred             HHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---ccC
Confidence            4568889999999994 44 88999999985  569999999998888777432   44111222221 32221   122


Q ss_pred             CCccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       180 ~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          180 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            369999987654  478889999999999987754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.89  E-value=4.5e-05  Score=64.51  Aligned_cols=104  Identities=12%  Similarity=-0.014  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      +++|||+||++++|.+.++.+...|++|+++.+++++.+.+.++.+-..  ..|..+.++..+.+.+...  +++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4689999999999999999999999999999999988877763332211  2344444233333333222  36999999


Q ss_pred             CCCch-----------h---------------HHHHHHhh-ccCCEEEEEccccc
Q 019042          234 NVGGK-----------M---------------LDAVLLNM-RIHGRIAVCGMISQ  261 (347)
Q Consensus       234 ~~g~~-----------~---------------~~~~~~~l-~~~G~~v~~g~~~~  261 (347)
                      ++|..           .               .+.+...| +.+|++|.+++..+
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            99721           1               12344444 45799999987654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.89  E-value=8.7e-05  Score=64.09  Aligned_cols=80  Identities=25%  Similarity=0.399  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCC-Ce----eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGF-DD----AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~-~~----vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+||+|++|..+++.+...|++|++++++.++.+.+.++   .+. ..    ..|..+.+++.+.+.++..  +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999998776554322   232 11    1344444234443333221  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.++|
T Consensus       111 ~iD~vi~~Ag  120 (279)
T 1xg5_A          111 GVDICINNAG  120 (279)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.88  E-value=0.00013  Score=62.34  Aligned_cols=80  Identities=18%  Similarity=0.258  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   |.. .  ..|..+.+++.+.+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999987766554333   332 1  2344444233333333221  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        86 d~lv~nAg   93 (262)
T 1zem_A           86 DFLFNNAG   93 (262)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999886

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.88  E-value=0.0001  Score=65.05  Aligned_cols=80  Identities=15%  Similarity=0.195  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--C---eeEecCChhhHHHHHHHHC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF--D---DAFNYKKEPDLDAALKRCF--PE  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~---~vi~~~~~~~~~~~i~~~~--~~  226 (347)
                      .++++||+||+|++|...++.+...|++|++++++.++.+.+.+.+   +.  .   ...|..+.+++.+.+.+..  .+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999988766554332   32  1   1234445423444443332  13


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.++|
T Consensus        87 ~id~lv~nAg   96 (319)
T 3ioy_A           87 PVSILCNNAG   96 (319)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.88  E-value=5.7e-05  Score=63.98  Aligned_cols=80  Identities=11%  Similarity=0.181  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++|... ..|..+.+++.+.+.+...  +++|++|.
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46799999999999999999999999999999999887776654556421 2344444234333333221  36999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        84 ~Ag   86 (245)
T 1uls_A           84 YAG   86 (245)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            998

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.87  E-value=6.5e-05  Score=65.38  Aligned_cols=78  Identities=13%  Similarity=0.201  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      +|++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. .  ..|..+.+++.+.+.+.  +++|++|.
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            5789999999999999999999999999999999998877776455432 1  23444442344444433  46999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        93 nAg   95 (291)
T 3rd5_A           93 NAG   95 (291)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            988

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.86  E-value=0.00018  Score=61.29  Aligned_cols=79  Identities=15%  Similarity=0.174  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      +++++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+.+++.+.+.+..  -+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999987765543233   432 1  234444423444333322  13699


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.++|
T Consensus        82 ~lv~nAg   88 (256)
T 1geg_A           82 VIVNNAG   88 (256)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.85  E-value=7.1e-05  Score=63.94  Aligned_cols=80  Identities=24%  Similarity=0.320  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            46899999999999999999999999999999999998877765676532   2344443234333333321  269999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        88 i~~Ag   92 (261)
T 3n74_A           88 VNNAG   92 (261)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.84  E-value=0.00018  Score=61.95  Aligned_cols=104  Identities=17%  Similarity=0.250  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++.+. .++.+.+.+   +.|...   ..|..+.+++.+.+.+...  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999998654 344443332   334431   2344444234444443322  36


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +|++|.++|..                          ..+.+...++.+|++|.+++..
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            99999998731                          1244555677789999987743

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.84  E-value=0.00014  Score=61.53  Aligned_cols=80  Identities=24%  Similarity=0.325  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|++|...++.+...|++|+++++ ++++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999998 776655443232   432 1  2344444234444433221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        83 id~lv~nAg   91 (246)
T 2uvd_A           83 VDILVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.84  E-value=8.3e-05  Score=63.83  Aligned_cols=80  Identities=14%  Similarity=0.125  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~-~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+||+|++|...++.+.. .|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+.++..  ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            568999999999999999988888 8999999999987655443233   332 1  2344443234333333221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        83 id~li~~Ag   91 (276)
T 1wma_A           83 LDVLVNNAG   91 (276)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.84  E-value=0.00012  Score=63.15  Aligned_cols=81  Identities=15%  Similarity=0.281  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC---C-e--eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF---D-D--AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~---~-~--vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ++++++|+||+|++|...++.+...|++|++++++.++.+.+.+++   ..   . .  ..|..+.+++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999988776655344   21   1 1  2344443234333333221  


Q ss_pred             CCccEEEECCCc
Q 019042          226 EGIDIYFENVGG  237 (347)
Q Consensus       226 ~~~d~vid~~g~  237 (347)
                      +++|++|.++|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.84  E-value=0.00014  Score=61.62  Aligned_cols=79  Identities=14%  Similarity=0.233  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHH-HHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVN-LLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~-~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++ ++.+ .++ +.+...   ..|..+.+++.+.+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999887 6544 333 555421   2344444234333333221  3699


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.++|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.84  E-value=5.1e-05  Score=64.40  Aligned_cols=80  Identities=26%  Similarity=0.438  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+|++|++|.+.++.+...|++|+++++++++.+.+.+.++..   ...|..+.+++.+.+.+...  +++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999998877666455432   22455554244443433321  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +.++|
T Consensus        88 v~nAg   92 (248)
T 3op4_A           88 VNNAG   92 (248)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.84  E-value=7.6e-05  Score=64.46  Aligned_cols=105  Identities=16%  Similarity=0.231  Sum_probs=73.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.++..+.+.+...  +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999999988777665666532   2344444233333333321  369999


Q ss_pred             EECCCch-----------h---------------HHHHHHhhcc--CCEEEEEccccc
Q 019042          232 FENVGGK-----------M---------------LDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       232 id~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      |.++|..           .               .+.++..++.  +|++|.+++...
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  163 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA  163 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence            9999821           1               2344455544  579998887554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.83  E-value=5.8e-05  Score=63.54  Aligned_cols=80  Identities=13%  Similarity=0.069  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      +.+++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++..   ...|..+.+++.+.+.+...  +++|++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            568999999999999999999999999999999998877776455432   12344444234433333321  3699999


Q ss_pred             ECCCc
Q 019042          233 ENVGG  237 (347)
Q Consensus       233 d~~g~  237 (347)
                      .++|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            99883

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.82  E-value=9e-05  Score=62.82  Aligned_cols=80  Identities=20%  Similarity=0.329  Sum_probs=59.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee---EecCChhhHHHHHHHHCCCCccEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA---FNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      -.++++|+|+||+|++|...++.+...|++|++++++.++.+.+.+++.....   .|..+.+++.+.+.+.  +++|++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence            34688999999999999999999999999999999999888777656654322   2333332333333332  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        89 i~~Ag   93 (249)
T 3f9i_A           89 VCNAG   93 (249)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.81  E-value=0.00014  Score=63.60  Aligned_cols=82  Identities=15%  Similarity=0.130  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC--e--eEecCCh-hhHHHHHHHHCC--
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD--D--AFNYKKE-PDLDAALKRCFP--  225 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~--~--vi~~~~~-~~~~~~i~~~~~--  225 (347)
                      .++++++|+||+|++|.++++.+...|++|++++++.++.+.+.+++   +..  .  ..|..+. +.....+..+..  
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999988765544343   211  1  2344332 133333332211  


Q ss_pred             CCccEEEECCCc
Q 019042          226 EGIDIYFENVGG  237 (347)
Q Consensus       226 ~~~d~vid~~g~  237 (347)
                      +++|++|.++|.
T Consensus        90 g~iD~lv~nAg~  101 (311)
T 3o26_A           90 GKLDILVNNAGV  101 (311)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            369999999983

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.81  E-value=6.7e-05  Score=63.93  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. .  ..|..+.+++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4679999999999999999999999999999999988776665455432 1  2344444244444433321  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        84 v~nAg   88 (254)
T 1hdc_A           84 VNNAG   88 (254)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.79  E-value=0.00024  Score=61.10  Aligned_cols=80  Identities=19%  Similarity=0.220  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      .+.+++|+||+|++|...+..+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+.+..  .+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            4689999999999999999999999999999999987765544232   432 1  234444323433333322  1369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus       110 D~li~~Ag  117 (272)
T 1yb1_A          110 SILVNNAG  117 (272)
T ss_dssp             SEEEECCC
T ss_pred             cEEEECCC
Confidence            99999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.79  E-value=0.00025  Score=61.48  Aligned_cols=80  Identities=18%  Similarity=0.217  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh-----CCC---eeEecCChhhHHHHHHHHCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKEKVNLLKNKF-----GFD---DAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~---~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ++++++|+||+|++|.+.++.+...|+   +|+++.++.++.+.+.+++     +..   ...|..+.+++.+.+.+...
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468999999999999999888777776   9999999988776665333     322   12355554355555555433


Q ss_pred             --CCccEEEECCC
Q 019042          226 --EGIDIYFENVG  236 (347)
Q Consensus       226 --~~~d~vid~~g  236 (347)
                        +++|++|.++|
T Consensus       112 ~~g~iD~lVnnAG  124 (287)
T 3rku_A          112 EFKDIDILVNNAG  124 (287)
T ss_dssp             GGCSCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              36999999988

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.79  E-value=8.2e-05  Score=64.41  Aligned_cols=81  Identities=21%  Similarity=0.258  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      .+++++|+||++++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            46899999999999999999999999999999999988777764665432   2344443233333333321  369999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      +.++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999873

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.79  E-value=0.00023  Score=60.23  Aligned_cols=80  Identities=10%  Similarity=0.096  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC---Ce--eEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF---DD--AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~--vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++..   ..  ..|..+.+++.+.+.+...  +.+|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            467999999999999999999999999999999998876655434432   11  2344443233333333211  3599


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.++|
T Consensus        85 ~li~~Ag   91 (251)
T 1zk4_A           85 TLVNNAG   91 (251)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.78  E-value=0.0001  Score=62.93  Aligned_cols=80  Identities=20%  Similarity=0.236  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC---C---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF---D---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++..   .   ...|..+.+++.+.+.+...  +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999999887776645432   1   12344444234443333321  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        85 d~lv~nAg   92 (257)
T 3imf_A           85 DILINNAA   92 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.77  E-value=0.00018  Score=62.63  Aligned_cols=92  Identities=20%  Similarity=0.259  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -+|++|+|+|+ |.+|+.+++.++..|++|++..++.++.+.+. ++|+. .++..   ++.+.+     ...|+|+.++
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~-~~~~~---~l~~~l-----~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGME-PFHIS---KAAQEL-----RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSE-EEEGG---GHHHHT-----TTCSEEEECC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCe-ecChh---hHHHHh-----cCCCEEEECC
Confidence            46899999995 99999999999999999999999988877776 77864 33322   333333     2489999999


Q ss_pred             Cchh-HHHHHHhhccCCEEEEEcc
Q 019042          236 GGKM-LDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~~-~~~~~~~l~~~G~~v~~g~  258 (347)
                      .... -...+..+++++.++.++.
T Consensus       222 p~~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          222 PALVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             SSCCBCHHHHHHSCTTCEEEECSS
T ss_pred             ChHHhCHHHHHhcCCCCEEEEecC
Confidence            7543 2456788999999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.77  E-value=9.7e-05  Score=63.33  Aligned_cols=80  Identities=15%  Similarity=0.306  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +...   ..|..+.+++.+.+.+...  +++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999999988766654343   4321   2344444234333333321  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        83 D~lVnnAG   90 (264)
T 3tfo_A           83 DVLVNNAG   90 (264)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.76  E-value=0.00022  Score=62.00  Aligned_cols=104  Identities=18%  Similarity=0.201  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-VNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|+++||+||+|++|.+.++.+...|++|+++.++.++ .+.+.+   +.+...   ..|..+.+++.+.+.+...  ++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999987653 222221   334321   2244444233333333221  36


Q ss_pred             ccEEEECCCch---------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          228 IDIYFENVGGK---------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +|++|.++|..                           ..+.++..++.+|++|.+++..
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV  185 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence            99999987621                           1233445567789999988754

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.75  E-value=0.00015  Score=65.79  Aligned_cols=101  Identities=20%  Similarity=0.137  Sum_probs=74.6

Q ss_pred             HHHHhhhhc-CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHH
Q 019042          145 AYGGLYELC-SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRC  223 (347)
Q Consensus       145 A~~~l~~~~-~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~  223 (347)
                      .+.++.+.. ..-.|++|+|.|. |.+|+.+++.++..|++|+++.+++.+...+. ..|.. +.      ++.+.+.  
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~-vv------~LeElL~--  301 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFE-VV------TLDDAAS--  301 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE-EC------CHHHHGG--
T ss_pred             HHHHHHHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCce-ec------cHHHHHh--
Confidence            344443332 3457999999995 99999999999999999999998887655555 55653 22      3333333  


Q ss_pred             CCCCccEEEECCCch-hH-HHHHHhhccCCEEEEEccc
Q 019042          224 FPEGIDIYFENVGGK-ML-DAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       224 ~~~~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~  259 (347)
                         ..|+|+.+.|.. .+ ...+..|++++.++.+|-.
T Consensus       302 ---~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          302 ---TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             ---GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred             ---hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCC
Confidence               389999999874 33 6788999999999988763

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.75  E-value=0.00013  Score=62.54  Aligned_cols=80  Identities=19%  Similarity=0.267  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++    +...   ..|..+.+++.+.+.+...  ++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999987765543233    5431   2344444234433333221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus       100 iD~lvnnAg  108 (267)
T 1vl8_A          100 LDTVVNAAG  108 (267)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.75  E-value=0.00018  Score=61.79  Aligned_cols=104  Identities=16%  Similarity=0.259  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++.+. .++.+.+.+   ..|...   ..|..+.+++.+.+.+...  ++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987654 444333322   334421   2344444234444433321  36


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +|++|.++|..                          ..+.++..++.+|++|.+++..
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            99999998831                          1244566777899999998754

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.74  E-value=0.00026  Score=60.94  Aligned_cols=79  Identities=13%  Similarity=0.204  Sum_probs=57.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC--C-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF--D-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++..  . .  ..|..+.+++.+.+.+...  +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999999998877766545532  1 1  2344454344444444332  368999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.++|.
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.74  E-value=0.0002  Score=61.37  Aligned_cols=105  Identities=8%  Similarity=0.067  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhCCC--e--eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK---NKFGFD--D--AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~---~~~g~~--~--vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ++++++|+||+|  |+|.+.++.+...|++|+++.+++...+.+.   ++++..  .  ..|..+.+++.+.+.+...  
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            478999999994  5999999999999999999988764333333   133331  1  2344444244444443322  


Q ss_pred             CCccEEEECCCch------------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          226 EGIDIYFENVGGK------------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       226 ~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +.+|+++.++|..                              ..+.++..++++|++|.+++...
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence            3689999988731                              11233445566899999887544

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.74  E-value=0.00015  Score=61.49  Aligned_cols=80  Identities=24%  Similarity=0.392  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   |.. .  ..|..+.+++.+.+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999999988766554333   432 1  2344444234333333221  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        86 d~lv~nAg   93 (247)
T 2jah_A           86 DILVNNAG   93 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.74  E-value=0.00015  Score=61.97  Aligned_cols=105  Identities=17%  Similarity=0.178  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+|++|++|.+.++.+...|++|+++ .++.++.+.+.++   .+.. .  ..|..+.++..+.+.+...  ++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999998 4444443333222   3432 1  2344444234433333321  36


Q ss_pred             ccEEEECCCch------------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          228 IDIYFENVGGK------------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       228 ~d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +|+++.++|..            .               .+.++..++++|++|.+++...
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~  147 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG  147 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh
Confidence            99999998621            0               1233345566889999887543

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.73  E-value=0.00036  Score=60.72  Aligned_cols=106  Identities=10%  Similarity=0.050  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCCCh--HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhCCCe--eEecCChhhHHHHHHHHC--CC
Q 019042          156 KKGEYVYVSAASGA--VGQLVGQFAKLVGCYVVGSAGSKEKVNLLK---NKFGFDD--AFNYKKEPDLDAALKRCF--PE  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~--vG~~a~qla~~~G~~V~~~~~~~~~~~~~~---~~~g~~~--vi~~~~~~~~~~~i~~~~--~~  226 (347)
                      -++++++|+||+|+  +|.+.++.+...|++|+++.++++..+.++   ++.+...  ..|..+.+++.+.+.+..  .+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35789999999855  999999999999999999998865333332   1344322  234444423333333322  13


Q ss_pred             CccEEEECCCch------------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK------------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ++|++|.++|..                              ..+.++..++.+|++|.+++...
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            699999998731                              12345556677899999887543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.73  E-value=2.3e-05  Score=65.98  Aligned_cols=105  Identities=14%  Similarity=0.153  Sum_probs=71.6

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-CeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-DDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      ++-+|++++|+|+++++|.+.++.+...|++|+++.++.++.+... .-.+ ....|..++++..+.+.++  +++|+++
T Consensus         7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDiLV   83 (242)
T 4b79_A            7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEAL--PRLDVLV   83 (242)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHHC--SCCSEEE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence            3346999999999999999999999999999999999876543222 1111 1234555543444444432  4699999


Q ss_pred             ECCCch---------h---------------HHHHHHhhc-cCCEEEEEccccc
Q 019042          233 ENVGGK---------M---------------LDAVLLNMR-IHGRIAVCGMISQ  261 (347)
Q Consensus       233 d~~g~~---------~---------------~~~~~~~l~-~~G~~v~~g~~~~  261 (347)
                      +++|-.         .               .+.++..|+ .+|++|.+++..+
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            999831         1               133455554 4799999987654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.73  E-value=0.00015  Score=61.98  Aligned_cols=80  Identities=19%  Similarity=0.284  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|++|...++.+...|++|+++++++++.+.+.+++    +...   ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999999987765544233    5321   2344444234443333221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        86 id~lv~~Ag   94 (263)
T 3ai3_A           86 ADILVNNAG   94 (263)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.73  E-value=0.00012  Score=63.04  Aligned_cols=80  Identities=11%  Similarity=0.113  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhCCCe--eEecCChhhHHHHHHHHC--CCC
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKE---KVNLLKNKFGFDD--AFNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~--~~~  227 (347)
                      ++++++|+||+  |++|.+.++.+...|++|++++++.+   ..+.+.+..+...  ..|..+.+++.+.+.+..  -++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999998  99999999999999999999998764   3444442344322  234444423333333322  136


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        85 id~lv~nAg   93 (275)
T 2pd4_A           85 LDFIVHSVA   93 (275)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.72  E-value=0.00015  Score=62.15  Aligned_cols=80  Identities=16%  Similarity=0.180  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCC-e--eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF-----GFD-D--AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~--vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+||+|++|...++.+...|++|++++++.++.+.+.+++     +.. .  ..|..+.+++.+.+.+...  +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999987765544233     432 1  2344444234444433221  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.++|
T Consensus        92 ~id~lv~nAg  101 (267)
T 1iy8_A           92 RIDGFFNNAG  101 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.71  E-value=0.0003  Score=60.87  Aligned_cols=104  Identities=13%  Similarity=0.132  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHH---HhCCCe---eEecCChhhHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KEKVNLLKN---KFGFDD---AFNYKKEPDLDA  218 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~~---vi~~~~~~~~~~  218 (347)
                      +|+++||+||+|++|...++.+...|++|++++++            .++.+.+..   ..+...   ..|..+.+++.+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            47899999999999999999999999999999876            444433321   234321   234444423433


Q ss_pred             HHHHHCC--CCccEEEECCCch---------h---------------HHHHHHhhccCCEEEEEcccc
Q 019042          219 ALKRCFP--EGIDIYFENVGGK---------M---------------LDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       219 ~i~~~~~--~~~d~vid~~g~~---------~---------------~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      .+.+...  +++|++|.++|..         .               .+.++..++.+|++|.+++..
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            3333321  3699999998831         1               133444556789999988743

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.71  E-value=0.00043  Score=58.29  Aligned_cols=78  Identities=18%  Similarity=0.193  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee--EecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ++++++|+|++|++|...++.+...|++|++++++.++.+.+.+++....+  .|..+.+++.+.+.+  -+++|++|.+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~   83 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS--VGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT--CCCCCEEEEC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHH--cCCCCEEEEC
Confidence            478999999999999999999999999999999998877665534432222  344443122222221  1368999999


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      +|
T Consensus        84 Ag   85 (244)
T 3d3w_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.70  E-value=0.00011  Score=63.03  Aligned_cols=104  Identities=17%  Similarity=0.190  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++. ++.++.+.+.+   ..+...   ..|..+.+++.+.+.+...  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999874 44444443332   334321   2344444233333333321  36


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +|++|.++|..                          ..+.++..++.+|++|.+++..
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  164 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ  164 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence            99999999831                          1234555677789999988643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.70  E-value=0.0003  Score=61.27  Aligned_cols=105  Identities=11%  Similarity=0.038  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhCCCee--EecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK---NKFGFDDA--FNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~---~~~g~~~v--i~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|  ++|.+.++.+...|++|++++++++..+.++   ++.+....  .|..+.+++.+.+.+...  ++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999987  9999999999999999999998864333322   24444322  344444234444433321  36


Q ss_pred             ccEEEECCCch---------------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          228 IDIYFENVGGK---------------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       228 ~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +|++|.++|..               .               .+.++..++.+|++|.+++...
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            99999999731               0               1223345566899999887544

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.70  E-value=0.00017  Score=62.20  Aligned_cols=80  Identities=19%  Similarity=0.317  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+.+++.+.+.+..  -+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999987765443233   432 1  234444423433333322  1369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus       101 D~lv~~Ag  108 (277)
T 2rhc_B          101 DVLVNNAG  108 (277)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.70  E-value=0.00022  Score=61.57  Aligned_cols=78  Identities=21%  Similarity=0.168  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC-CCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP-EGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~-~~~d~vi  232 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+... +++|++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            46899999999999999999999999999999999988877765776531   2344554345555554421 2689999


Q ss_pred             EC
Q 019042          233 EN  234 (347)
Q Consensus       233 d~  234 (347)
                      .+
T Consensus       109 ~~  110 (281)
T 3ppi_A          109 VA  110 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            88

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.70  E-value=6.7e-05  Score=64.02  Aligned_cols=80  Identities=20%  Similarity=0.167  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. .  ..|..+.+++.+.+.+...  +++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999999999887665554355442 1  2344444234443433221  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        86 v~nAg   90 (257)
T 3tpc_A           86 VNCAG   90 (257)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.70  E-value=0.00015  Score=61.55  Aligned_cols=81  Identities=16%  Similarity=0.186  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----C-C-Ce--eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF-----G-F-DD--AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~-----g-~-~~--vi~~~~~~~~~~~i~~~~~--  225 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++     + . ..  ..|..+.++..+.+.+...  
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            4679999999999999999999999999999999988776655333     2 1 11  2344444234443333321  


Q ss_pred             CCccEEEECCCc
Q 019042          226 EGIDIYFENVGG  237 (347)
Q Consensus       226 ~~~d~vid~~g~  237 (347)
                      +++|++|.++|.
T Consensus        86 g~iD~lvnnAg~   97 (250)
T 3nyw_A           86 GAVDILVNAAAM   97 (250)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999999983

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.69  E-value=0.0002  Score=60.77  Aligned_cols=78  Identities=21%  Similarity=0.322  Sum_probs=57.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      ++++|+|++|++|.+.++.+...|++|++++++.++.+.+.++++.. .  ..|..+.+++.+.+.+...  +++|++|.
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            36899999999999999999999999999999988877666466532 1  2344554344455554433  26999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        81 nAg   83 (248)
T 3asu_A           81 NAG   83 (248)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            887

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.69  E-value=0.00034  Score=59.60  Aligned_cols=80  Identities=16%  Similarity=0.208  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+||+|++|...++.+...|++|+++++ +.++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999998 766555443232   432 1  2344443234333433221  25


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        86 id~li~~Ag   94 (261)
T 1gee_A           86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.69  E-value=0.00033  Score=59.72  Aligned_cols=80  Identities=11%  Similarity=0.097  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-------C-Ce--eEecCChhhHHHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---G-------F-DD--AFNYKKEPDLDAALKRC  223 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g-------~-~~--vi~~~~~~~~~~~i~~~  223 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +       . ..  ..|..+.+++.+.+.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4679999999999999999999999999999999988766554233   1       1 11  23444432333333332


Q ss_pred             CC--CCc-cEEEECCC
Q 019042          224 FP--EGI-DIYFENVG  236 (347)
Q Consensus       224 ~~--~~~-d~vid~~g  236 (347)
                      ..  +++ |++|.++|
T Consensus        86 ~~~~g~i~d~vi~~Ag  101 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAG  101 (264)
T ss_dssp             HHHHSSCCSEEEECCC
T ss_pred             HHHhCCCCeEEEECCC
Confidence            11  246 99999987

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.69  E-value=0.0002  Score=61.14  Aligned_cols=81  Identities=17%  Similarity=0.185  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhCCCee--EecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKE---KVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+  |++|...++.+...|++|++++++++   ..+.+.++.+....  .|..+.+++.+.+.+...  ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999998  89999999999889999999998864   33444423443222  344444233333333221  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus        87 iD~lv~~Ag~   96 (261)
T 2wyu_A           87 LDYLVHAIAF   96 (261)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.69  E-value=0.00011  Score=62.84  Aligned_cols=80  Identities=20%  Similarity=0.276  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---G-FD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g-~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      .|++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   + .. .  ..|..+.+++.+.+.+...  ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999988766554333   2 11 1  2344444233333333221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        89 id~lvnnAg   97 (262)
T 3pk0_A           89 IDVVCANAG   97 (262)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.69  E-value=0.00026  Score=59.60  Aligned_cols=75  Identities=16%  Similarity=0.259  Sum_probs=53.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCC--CCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFP--EGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~--~~~d~vid~  234 (347)
                      +++++|+||+|++|.+.++.+...|++|+++++++++  ..+ +++... ..|..+. +..+.+.+...  +++|+++.+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEKD-DPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTTS-CHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCchH-HHHHHHHHHHHHcCCCCEEEEC
Confidence            5689999999999999999999999999999998776  233 556321 2333332 44444333221  369999999


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      .|
T Consensus        78 Ag   79 (239)
T 2ekp_A           78 AA   79 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.69  E-value=0.00023  Score=61.10  Aligned_cols=80  Identities=19%  Similarity=0.285  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHH---hCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNK---FGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+||+|++|...++.+...|++|+++++ +.++.+.+.++   .+...   ..|..+.+++.+.+.+...  ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999998 66655443322   34431   2344443234444433221  25


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus       100 ~d~vi~~Ag  108 (274)
T 1ja9_A          100 LDFVMSNSG  108 (274)
T ss_dssp             EEEEECCCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.69  E-value=0.00018  Score=61.88  Aligned_cols=80  Identities=16%  Similarity=0.166  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++....  ..|..+.+++.+.+.+...  +++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999999999887766653443222  2344443233333333221  3699999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      .++|
T Consensus        88 ~nAg   91 (270)
T 1yde_A           88 NNAG   91 (270)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.69  E-value=0.00017  Score=62.29  Aligned_cols=81  Identities=20%  Similarity=0.303  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      .+++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +...   ..|..+.+++.+.+.+...  ++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999988766554343   3321   2344444234333333321  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus       102 id~lv~nAg  110 (279)
T 3sju_A          102 IGILVNSAG  110 (279)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999988

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.68  E-value=0.00027  Score=59.26  Aligned_cols=98  Identities=19%  Similarity=0.185  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++.+|+|+||+|++|...++.+...|++|+++++++++.+.+. ..+...++..    |+.+.+.+.. +++|+||.++|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~----Dl~~~~~~~~-~~~D~vi~~ag   93 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVA----NLEEDFSHAF-ASIDAVVFAAG   93 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEEC----CTTSCCGGGG-TTCSEEEECCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEc----ccHHHHHHHH-cCCCEEEECCC
Confidence            4679999999999999999999999999999999998877776 5555122222    1112222222 25999999998


Q ss_pred             chh--------------HHHHHHhhcc--CCEEEEEcccc
Q 019042          237 GKM--------------LDAVLLNMRI--HGRIAVCGMIS  260 (347)
Q Consensus       237 ~~~--------------~~~~~~~l~~--~G~~v~~g~~~  260 (347)
                      ...              ....++.++.  .+++|.+++..
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            421              1223333332  37899888754

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.68  E-value=0.0002  Score=60.82  Aligned_cols=82  Identities=16%  Similarity=0.154  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C--CC-eeEec--CChhhHHHHHHHHC--
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----G--FD-DAFNY--KKEPDLDAALKRCF--  224 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g--~~-~vi~~--~~~~~~~~~i~~~~--  224 (347)
                      -++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++    +  .. ...|.  .+.++..+.+.+..  
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999988766554332    2  11 12333  33323333333322  


Q ss_pred             CCCccEEEECCCc
Q 019042          225 PEGIDIYFENVGG  237 (347)
Q Consensus       225 ~~~~d~vid~~g~  237 (347)
                      .+++|++|.++|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            1369999999873

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.68  E-value=0.00029  Score=60.41  Aligned_cols=78  Identities=18%  Similarity=0.275  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CC---eeEecCChhhHHHHHHHHCCCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---G--FD---DAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g--~~---~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +  ..   ...|..+.+.+.+.+.+ . +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~-g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK-Y-PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-C-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-c-CCC
Confidence            4789999999999999999999999999999999987665443232   2  21   12244443233333332 2 369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |+++.++|
T Consensus        87 d~lv~nAg   94 (267)
T 3t4x_A           87 DILINNLG   94 (267)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.68  E-value=0.00019  Score=62.17  Aligned_cols=81  Identities=14%  Similarity=0.138  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---CC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG---FD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g---~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++.   .. .  ..|..+.+++.+.+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999887766654542   22 1  2344444234343433321  369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |+++.++|.
T Consensus       107 D~lVnnAg~  115 (283)
T 3v8b_A          107 DIVVANAGI  115 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.68  E-value=0.0002  Score=60.78  Aligned_cols=81  Identities=20%  Similarity=0.215  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988776655333   332 1  2344443233333333221  369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.68  E-value=8.7e-05  Score=61.82  Aligned_cols=89  Identities=9%  Similarity=0.062  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.+              .|..+.+++.+.+.++  +++|+++.+.|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            4678999999999999999999889999999987643              2333332344444444  46899999887


Q ss_pred             ch---------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          237 GK---------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       237 ~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ..                           ..+.+...++++|+++.+++...
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            31                           12334445666899999987544

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.67  E-value=0.00025  Score=60.96  Aligned_cols=81  Identities=16%  Similarity=0.274  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHH---HHHCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAAL---KRCFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i---~~~~~~~  227 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++.+.+   .+...++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999987765543232   432   123444432333333   3333256


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999873

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.67  E-value=0.00013  Score=62.11  Aligned_cols=80  Identities=20%  Similarity=0.235  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC-CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP-EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~-~~~d  229 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   |..   ...|..+.+++.+.+.+... +++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            4689999999999999999999999999999999887665554333   432   12344444233333332211 4699


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.++|
T Consensus        86 ~lv~nAg   92 (252)
T 3h7a_A           86 VTIFNVG   92 (252)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999998

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.67  E-value=0.0003  Score=60.64  Aligned_cols=80  Identities=13%  Similarity=0.149  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-------------CHHHHHHHHH---HhCCCe---eEecCChhhHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-------------SKEKVNLLKN---KFGFDD---AFNYKKEPDLD  217 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-------------~~~~~~~~~~---~~g~~~---vi~~~~~~~~~  217 (347)
                      ++++++|+|+++++|.+.++.+...|++|+++++             +.++.+.+.+   ..+...   ..|..+.+++.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999999999999999999999999999987             4555444332   223321   23444442344


Q ss_pred             HHHHHHCC--CCccEEEECCC
Q 019042          218 AALKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       218 ~~i~~~~~--~~~d~vid~~g  236 (347)
                      +.+.+...  +++|++|.++|
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg  110 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAG  110 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHcCCCCEEEECCC
Confidence            43433221  36999999997

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.67  E-value=0.00024  Score=63.43  Aligned_cols=79  Identities=23%  Similarity=0.368  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHHhCCCe---eEecCChhhHHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-----------VNLLKNKFGFDD---AFNYKKEPDLDAALKR  222 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-----------~~~~~~~~g~~~---vi~~~~~~~~~~~i~~  222 (347)
                      +|++++|+||++++|.+.++.+...|++|++++++.++           .+.++ ..|...   ..|..+.+++.+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999987652           23333 445421   2355554344444433


Q ss_pred             HCC--CCccEEEECCC
Q 019042          223 CFP--EGIDIYFENVG  236 (347)
Q Consensus       223 ~~~--~~~d~vid~~g  236 (347)
                      ...  +++|++|.++|
T Consensus       123 ~~~~~g~iDilVnnAG  138 (346)
T 3kvo_A          123 AIKKFGGIDILVNNAS  138 (346)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            322  36999999998

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.67  E-value=0.00018  Score=61.08  Aligned_cols=80  Identities=13%  Similarity=0.152  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe----eEecCChhhHHHHHHHHC-CCCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD----AFNYKKEPDLDAALKRCF-PEGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~-~~~~d~v  231 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.++++...    ..|..+.+++.+.+.+.. .+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            46799999999999999999999999999999999887766554554321    234444323333332221 1369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        90 i~~Ag   94 (254)
T 2wsb_A           90 VNSAG   94 (254)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.67  E-value=0.00049  Score=59.30  Aligned_cols=105  Identities=15%  Similarity=0.199  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHH---HhCCCe---eEecCChhhHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KEKVNLLKN---KFGFDD---AFNYKKEPDLDA  218 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~~---vi~~~~~~~~~~  218 (347)
                      .|+++||+||+|++|.+.++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+.+++.+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999876            444433321   334321   234444423444


Q ss_pred             HHHHHCC--CCccEEEECCCch----------------------hHHHHHHhhcc---CCEEEEEccccc
Q 019042          219 ALKRCFP--EGIDIYFENVGGK----------------------MLDAVLLNMRI---HGRIAVCGMISQ  261 (347)
Q Consensus       219 ~i~~~~~--~~~d~vid~~g~~----------------------~~~~~~~~l~~---~G~~v~~g~~~~  261 (347)
                      .+.+...  +++|++|.++|..                      ..+.++..+..   +|++|.+++...
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            3433221  3699999999831                      12334444432   689999887543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.67  E-value=0.00043  Score=57.33  Aligned_cols=96  Identities=9%  Similarity=0.095  Sum_probs=64.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHH-HCCCEEEEEeCCHH-HHHHHHHHhCCC-ee--EecCChhhHHHHHHHHCCCCccEEEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKE-KVNLLKNKFGFD-DA--FNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~-~~G~~V~~~~~~~~-~~~~~~~~~g~~-~v--i~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ++|+|+||+|++|...++.+. ..|++|++++++++ +.+.+. ..+.. ..  .|..+.+++.+.+     .++|++|.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~-----~~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAV-----TNAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHH-----TTCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHH-----cCCCEEEE
Confidence            469999999999999998888 89999999999988 665553 22322 22  2444432233333     25899999


Q ss_pred             CCCchh--HHHHHHhhccC--CEEEEEcccc
Q 019042          234 NVGGKM--LDAVLLNMRIH--GRIAVCGMIS  260 (347)
Q Consensus       234 ~~g~~~--~~~~~~~l~~~--G~~v~~g~~~  260 (347)
                      +.|...  ...+++.++..  +++|.+++..
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            998632  34455555543  5898887654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.67  E-value=0.00018  Score=61.02  Aligned_cols=98  Identities=14%  Similarity=0.147  Sum_probs=67.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCC--CCccEEEECC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP--EGIDIYFENV  235 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--~~~d~vid~~  235 (347)
                      +++++|+||+|++|.+.++.+...|++|++++++.++.+.      ....++..+.+++.+.+.+...  +++|++|.++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A   95 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA   95 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            6799999999999999999999999999999988754221      1112333443244444544432  3799999999


Q ss_pred             Cc--------h-------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          236 GG--------K-------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       236 g~--------~-------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      |.        .                   ..+.+...++.+|++|.+++...
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            82        0                   12334556667899999987544

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.66  E-value=0.00032  Score=60.70  Aligned_cols=81  Identities=14%  Similarity=0.314  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe---eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD---AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      ++.+++|+||+|++|...++.+...|++|+++.++.++.+.+.+++   +...   ..|..+.+++.+.+.+..  .+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999889999999988877665543233   4321   234444423444443322  1369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.++|.
T Consensus       123 d~li~~Ag~  131 (285)
T 2c07_A          123 DILVNNAGI  131 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.66  E-value=0.00028  Score=60.19  Aligned_cols=80  Identities=16%  Similarity=0.299  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHH---HHCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALK---RCFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~---~~~~~~  227 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+.+++.+.+.   +...++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999987765543233   432 1  234444323333333   223246


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        88 id~lv~~Ag   96 (260)
T 2ae2_A           88 LNILVNNAG   96 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.66  E-value=0.00019  Score=61.40  Aligned_cols=80  Identities=18%  Similarity=0.250  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++...   ...|..+.+++.+.+.+...  +++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999999988776655344321   12344444234333333221  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        91 v~~Ag   95 (263)
T 3ak4_A           91 CANAG   95 (263)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.66  E-value=0.00024  Score=60.07  Aligned_cols=80  Identities=25%  Similarity=0.338  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      .+++++|+||+|++|...++.+...|++|++++++.++.+.+.+.+   +.. .  ..|..+.+++.+.+.+..  .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999999988766554333   432 1  234444424444444332  2369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        84 d~li~~Ag   91 (247)
T 3lyl_A           84 DILVNNAG   91 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.66  E-value=0.00025  Score=65.33  Aligned_cols=100  Identities=17%  Similarity=0.216  Sum_probs=73.3

Q ss_pred             HHHhhhhcCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC
Q 019042          146 YGGLYELCSP-KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       146 ~~~l~~~~~~-~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      +.++.+..+. -.|++++|+|+ |++|...++.++..|++|+++.+++.+...+. ..|++ +.+..   +.   +    
T Consensus       252 ~dgi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~le---e~---~----  318 (488)
T 3ond_A          252 PDGLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLTLE---DV---V----  318 (488)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGG---GT---T----
T ss_pred             HHHHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCCHH---HH---H----
Confidence            3344333333 47999999996 79999999999999999999999988877776 66653 22211   11   1    


Q ss_pred             CCCccEEEECCCc-hhH-HHHHHhhccCCEEEEEccc
Q 019042          225 PEGIDIYFENVGG-KML-DAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       225 ~~~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~  259 (347)
                       ..+|+++++.|. ..+ ...+..+++++.++.+|..
T Consensus       319 -~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          319 -SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             -TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             -HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence             248999999986 333 4478899999999988853

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.64  E-value=0.00015  Score=62.24  Aligned_cols=80  Identities=14%  Similarity=0.243  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHhCCC---eeEecCChhhHHHHHHHH---CC--
Q 019042          157 KGEYVYVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKEK-VNLLKNKFGFD---DAFNYKKEPDLDAALKRC---FP--  225 (347)
Q Consensus       157 ~~~~vlI~ga--~g~vG~~a~qla~~~G~~V~~~~~~~~~-~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~---~~--  225 (347)
                      ++++++|+|+  +|++|.+.++.+...|++|++++++.++ .+.+.++++..   ...|..+.+++.+.+.+.   .+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999998  8999999999999999999999988765 34444345432   123555542333333322   22  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +++|++|.++|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            16999999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.64  E-value=0.00014  Score=62.15  Aligned_cols=80  Identities=16%  Similarity=0.135  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      ++.+++|+|++|++|...++.+...|++|++++++.++.+.+.++++.. .  ..|..+.+++.+.+.+...  +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            4689999999999999999999999999999999877666555466543 1  2344443234444433221  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        91 i~~Ag   95 (265)
T 2o23_A           91 VNCAG   95 (265)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.64  E-value=0.00016  Score=62.39  Aligned_cols=80  Identities=20%  Similarity=0.272  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +|++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999887655544332   322 1  2344444234444433321  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus       111 D~lvnnAg  118 (276)
T 3r1i_A          111 DIAVCNAG  118 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.64  E-value=0.00034  Score=60.41  Aligned_cols=82  Identities=15%  Similarity=0.112  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHCC--C
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ..+++++|+||+|++|.+.++.+...|++|+++++ +.++.+.+.++   .|..   ...|..+.+++.+.+.+...  +
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999985 65554443322   3432   12344444344444443322  3


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|++|.++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.64  E-value=0.0003  Score=59.23  Aligned_cols=79  Identities=16%  Similarity=0.171  Sum_probs=53.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHH---hCCCe----eEecCChhhHHHHHHHHCC--CC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKNK---FGFDD----AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~~----vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +++++|+||+|++|...++.+...|++|+++ .++.++.+.+.++   .+...    ..|..+.+++.+.+.+...  ++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            3589999999999999999999999999998 7787765544322   24321    1244443233333333211  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        81 ~d~li~~Ag   89 (245)
T 2ph3_A           81 LDTLVNNAG   89 (245)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.64  E-value=0.00013  Score=63.65  Aligned_cols=80  Identities=15%  Similarity=0.245  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC---Ce----eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF---DD----AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~----vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++..   ..    ..|..+.+++.+.+.+...  ++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999998776655434432   11    2344444233333333321  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus       120 iD~lvnnAg  128 (293)
T 3rih_A          120 LDVVCANAG  128 (293)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.63  E-value=0.00033  Score=61.16  Aligned_cols=92  Identities=22%  Similarity=0.285  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -+|++|+|+|+ |.+|+.+++.++..|++|++.+++.++.+.+. ++|.. ++++.   ++.+.+     ..+|+|+.++
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~~---~l~~~l-----~~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHTD---ELKEHV-----KDIDICINTI  223 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEGG---GHHHHS-----TTCSEEEECC
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEchh---hHHHHh-----hCCCEEEECC
Confidence            46899999995 99999999999999999999999988877676 67763 33332   333332     2489999999


Q ss_pred             CchhH-HHHHHhhccCCEEEEEcc
Q 019042          236 GGKML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      ....+ ...+..+++++.++.++.
T Consensus       224 p~~~i~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          224 PSMILNQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             SSCCBCHHHHTTSCTTCEEEECSS
T ss_pred             ChhhhCHHHHHhCCCCCEEEEEeC
Confidence            86432 456778999999999876

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.63  E-value=0.00022  Score=61.50  Aligned_cols=81  Identities=17%  Similarity=0.295  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      -+|++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++    +...   ..|..+.++..+.+.+...  +
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999987655443232    4321   2344454234333433321  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.++|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            6999999998

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.63  E-value=0.0002  Score=61.22  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---EKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~---~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--  225 (347)
                      .+++++|+||++++|.+.++.+...|++|+++.+..   ++.+.+.+++   |..   ...|..+.++..+.+.+...  
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999987643   3333333233   332   12344444234333333321  


Q ss_pred             CCccEEEECCCch-----------h---------------HHHHHHhhccCCEEEEEccc
Q 019042          226 EGIDIYFENVGGK-----------M---------------LDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       226 ~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +++|++|.++|..           .               .+.++..++.+|++|.+++.
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            3699999999821           1               12334455678999988764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.62  E-value=0.00013  Score=63.11  Aligned_cols=80  Identities=19%  Similarity=0.310  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. .  ..|..+.+++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4679999999999999999999999999999999988776665455542 1  2344444234433333321  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        84 v~~Ag   88 (281)
T 3m1a_A           84 VNNAG   88 (281)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.62  E-value=0.00017  Score=61.95  Aligned_cols=80  Identities=18%  Similarity=0.329  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+.   .+..   ...|..+.+++.+.+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999998876554423   3332   22455554233333333221  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus       107 D~lvnnAg  114 (270)
T 3ftp_A          107 NVLVNNAG  114 (270)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.62  E-value=0.00011  Score=63.04  Aligned_cols=80  Identities=19%  Similarity=0.326  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK----FGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      .+++++|+|++|++|.+.++.+...|++|++++++.++.+.+.++    .+...   ..|..+.++..+.+.+...  ++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999998876554433    34321   2344443244433333321  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        99 id~lv~nAg  107 (266)
T 4egf_A           99 LDVLVNNAG  107 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CCEEEECCC
Confidence            999999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.62  E-value=0.00024  Score=61.28  Aligned_cols=80  Identities=20%  Similarity=0.220  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC--C-e--eEecCChhhHHHHHHHHC--CCCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF--D-D--AFNYKKEPDLDAALKRCF--PEGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~--vi~~~~~~~~~~~i~~~~--~~~~d  229 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++..  . .  ..|..+.+++.+.+.+..  .+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999999999999999999998876655434421  1 1  134444323333333322  13699


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.++|
T Consensus       108 ~lvnnAg  114 (276)
T 2b4q_A          108 ILVNNAG  114 (276)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.62  E-value=0.00014  Score=62.83  Aligned_cols=80  Identities=23%  Similarity=0.287  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---CCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG---FDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g---~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      .|+++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++.   ...   ..|..+.++..+.+.+...  +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999999888766654542   211   2344443233333333221  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.61  E-value=0.0002  Score=61.38  Aligned_cols=80  Identities=16%  Similarity=0.136  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCC--e--eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK----FGFD--D--AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~----~g~~--~--vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+|+++++|.+.++.+...|++|++++++.++.+.+.++    .+..  .  ..|..+.++..+.+.+...  +
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999998876555433    2322  1  1344444233333333221  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|+++.++|
T Consensus        87 ~id~lvnnAg   96 (265)
T 3lf2_A           87 CASILVNNAG   96 (265)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.61  E-value=0.00022  Score=55.67  Aligned_cols=95  Identities=20%  Similarity=0.236  Sum_probs=61.4

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      ....++++|+|.|+ |.+|+..++.++..|.+|+++++++++.+.+++..|.. ++..+.. + .+.+.+....++|+||
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVF   89 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEE
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEE
Confidence            34456889999995 99999999999999999999999988766554223443 3332221 2 1233332112699999


Q ss_pred             ECCCch-hHHHHHHhhcc-CC
Q 019042          233 ENVGGK-MLDAVLLNMRI-HG  251 (347)
Q Consensus       233 d~~g~~-~~~~~~~~l~~-~G  251 (347)
                      .|++.. ....+...++. +|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~  110 (155)
T 2g1u_A           90 AFTNDDSTNFFISMNARYMFN  110 (155)
T ss_dssp             ECSSCHHHHHHHHHHHHHTSC
T ss_pred             EEeCCcHHHHHHHHHHHHHCC
Confidence            999984 44444445554 44

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.61  E-value=0.00023  Score=61.80  Aligned_cols=81  Identities=15%  Similarity=0.212  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHh----CCC-e--eEecCC----hhhHHHHHHHHC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKNKF----GFD-D--AFNYKK----EPDLDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~~~----g~~-~--vi~~~~----~~~~~~~i~~~~  224 (347)
                      ++.+++|+||+|++|.+.++.+...|++|++++++. ++.+.+.+++    +.. .  ..|..+    .+++.+.+.+..
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            467999999999999999999999999999999987 6554443233    322 1  234444    323333333322


Q ss_pred             C--CCccEEEECCCc
Q 019042          225 P--EGIDIYFENVGG  237 (347)
Q Consensus       225 ~--~~~d~vid~~g~  237 (347)
                      .  +++|++|.++|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence            1  369999999873

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.60  E-value=0.00015  Score=61.88  Aligned_cols=81  Identities=20%  Similarity=0.273  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +...   ..|..+.++..+.+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988766554333   4321   2344444233333333221  369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |+++.++|.
T Consensus        91 d~lv~nAg~   99 (256)
T 3gaf_A           91 TVLVNNAGG   99 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.59  E-value=0.00027  Score=59.16  Aligned_cols=79  Identities=16%  Similarity=0.162  Sum_probs=56.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      +.+++|+||+|++|...++.+...|++|++++++.++.+.+.++++...  ..|..+.+++.+.+.+...  +++|++|.
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5689999999999999999999999999999999887776653443222  2344443234333333221  36899999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      +.|
T Consensus        85 ~Ag   87 (234)
T 2ehd_A           85 NAG   87 (234)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.58  E-value=0.00051  Score=57.77  Aligned_cols=79  Identities=25%  Similarity=0.345  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHC--CCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      |++++|+||+|++|...++.+...|++|+++ .++.++.+.+.++   .+.. .  ..|..+.+++.+.+.+..  .+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999985 7777665544322   3432 1  234444323444443322  1369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        81 d~li~~Ag   88 (244)
T 1edo_A           81 DVVVNNAG   88 (244)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.58  E-value=0.00043  Score=59.00  Aligned_cols=80  Identities=14%  Similarity=0.187  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC---CCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF---PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~---~~~  227 (347)
                      .+++++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+.+..   .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999999999999999987765544333   432 1  234444423444444331   346


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999994

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.57  E-value=0.00052  Score=59.72  Aligned_cols=105  Identities=14%  Similarity=0.120  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--EKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~--~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      +|+++||+||+|++|.+.++.+...|++|+++.++.  ++.+.+.+   +.|...   ..|..+.+++.+.+.+...  +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999988762  23332221   344421   1344443233333333221  3


Q ss_pred             CccEEEECCCch---------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK---------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ++|+++.+.|..                           ..+.++..++.+|++|.+++...
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            699999998731                           01334445667899999987654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.57  E-value=0.00019  Score=62.05  Aligned_cols=80  Identities=18%  Similarity=0.297  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC---C-e--eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF---D-D--AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~---~-~--vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ++++++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +.   . .  ..|..+.+++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4679999999999999999999999999999999988766554333   22   1 1  2344444233333333221  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +++|++|.++|
T Consensus        85 g~iD~lv~nAg   95 (280)
T 1xkq_A           85 GKIDVLVNNAG   95 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.57  E-value=0.00035  Score=59.45  Aligned_cols=80  Identities=13%  Similarity=0.186  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999987655443232   432 1  2344443234444433221  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        92 d~vi~~Ag   99 (260)
T 3awd_A           92 DILVACAG   99 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.57  E-value=0.00013  Score=62.46  Aligned_cols=79  Identities=15%  Similarity=0.074  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhCCCe-eEecCChhhHHHHHHHHC--CCCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV-NLLKNKFGFDD-AFNYKKEPDLDAALKRCF--PEGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~-~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~--~~~~d~vi  232 (347)
                      +++++||+||+|++|.+.++.+...|++|++++++.++. +.++ +.+... ..|..+.+++.+.+.+..  .+++|++|
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            467899999999999999999999999999999887653 3344 556532 234444423433333322  13699999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      .++|
T Consensus       105 ~nAg  108 (260)
T 3gem_A          105 HNAS  108 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9988

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.57  E-value=0.0045  Score=55.03  Aligned_cols=77  Identities=10%  Similarity=0.129  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHhCCC--e--eEecCChhhHHHHHHHHCCCCcc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GC-YVVGSAGSKEKVNLLKNKFGFD--D--AFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~-~V~~~~~~~~~~~~~~~~~g~~--~--vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      -++.+|||+||+|.+|...++.+... |. +|+++++++.+.+.+.+.+...  .  ..|..+.    +.+.+... ++|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~----~~l~~~~~-~~D   93 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL----ERLNYALE-GVD   93 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH----HHHHHHTT-TCS
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH----HHHHHHHh-cCC
Confidence            34689999999999999999888877 98 9999999988776665455321  1  1233332    23333332 599


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      +||.+++.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999974

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.57  E-value=0.00025  Score=60.52  Aligned_cols=80  Identities=16%  Similarity=0.254  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHh----CCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-VNLLKNKF----GFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-~~~~~~~~----g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+||+|++|...++.+...|++|+++++++++ .+.+.+++    +...   ..|..+.+++.+.+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999999999988766 54443233    4321   1344444234333333221  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.++|
T Consensus        83 ~iD~lv~~Ag   92 (260)
T 1x1t_A           83 RIDILVNNAG   92 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.56  E-value=0.00011  Score=62.69  Aligned_cols=104  Identities=13%  Similarity=0.098  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN---LLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~---~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +|++++|+||++|+|.+.++.+...|++|+++.++.++.+   .++ +.+..   ...|..+.++..+.+.+...  +++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALA-QRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHH-HHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHH-hcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999998765433   333 34432   12444554234333333322  369


Q ss_pred             cEEEECCCch-------------------------hHHHHHHhhc-cCCEEEEEccccc
Q 019042          229 DIYFENVGGK-------------------------MLDAVLLNMR-IHGRIAVCGMISQ  261 (347)
Q Consensus       229 d~vid~~g~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~~  261 (347)
                      |++++++|..                         ..+.++..|+ .+|++|.+++..+
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            9999999831                         1234455554 4799999987554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.56  E-value=0.00041  Score=58.94  Aligned_cols=79  Identities=18%  Similarity=0.297  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK--VNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~--~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ++++++|+||+|++|...++.+...|++|+++++++++  .+.++ ..+...   ..|..+.+++.+.+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46799999999999999999999999999999887642  12222 234321   1344443234443433221  3699


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.++|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.56  E-value=0.00022  Score=60.67  Aligned_cols=78  Identities=15%  Similarity=0.164  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee--EecCChhhHHHHHHHHCC--CCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++ +.+.++++. ..  .|..+.+++.+.+.+...  +++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46799999999999999999999999999999998776 444325542 22  344443234443333221  3699999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      .++|
T Consensus        83 ~~Ag   86 (256)
T 2d1y_A           83 NNAA   86 (256)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.56  E-value=0.0003  Score=59.98  Aligned_cols=80  Identities=20%  Similarity=0.277  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +...   ..|..+.+++.+.+.+...  +++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999987665443232   4321   2344443233333332221  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        93 D~lv~~Ag  100 (260)
T 2zat_A           93 DILVSNAA  100 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.55  E-value=0.00019  Score=61.74  Aligned_cols=80  Identities=23%  Similarity=0.356  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe---eEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD---AFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      +|+++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|..+.+++.+.+.+..  .+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            4789999999999999999999999999999999988766554333   4321   234444423433333322  1369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |+++.++|
T Consensus       105 D~lv~nAg  112 (271)
T 4ibo_A          105 DILVNNAG  112 (271)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.55  E-value=8.6e-05  Score=63.73  Aligned_cols=79  Identities=18%  Similarity=0.173  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+.+. .-... ...|..+.+++.+.+.+...  +++|++|.
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4679999999999999999999999999999999987655332 11111 12344443234333333221  36999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        94 nAg   96 (266)
T 3p19_A           94 NAG   96 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            998

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.55  E-value=0.00032  Score=59.27  Aligned_cols=79  Identities=20%  Similarity=0.166  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +.+++|+||+|++|...+..+...|++|++++++.++.+.+.+++    +.. .  ..|..+.+++.+.+.+...  +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999988766554344    221 1  2344443234343333221  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        82 d~li~~Ag   89 (250)
T 2cfc_A           82 DVLVNNAG   89 (250)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.55  E-value=0.00035  Score=58.37  Aligned_cols=76  Identities=12%  Similarity=0.169  Sum_probs=55.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +++|+||+|++|.+.+..+...|++|+++++++++.+.+.++++..   ...|..+.+++.+.+.+. ...+|+++.++|
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-~~~~d~lv~~Ag   81 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQL-DSIPSTVVHSAG   81 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSC-SSCCSEEEECCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHH-hhcCCEEEEeCC
Confidence            6899999999999999999999999999999999887776455432   223444442333333332 224599999988

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.55  E-value=0.00043  Score=59.51  Aligned_cols=80  Identities=19%  Similarity=0.308  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC--C-e--eEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF--D-D--AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~--vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      .+.+++|+||+|++|...++.+...|++|+++.++.++.+.+.++++.  . .  ..|..+.+++.+.+.+...  +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            467999999999999999999999999999999988776555435543  1 1  2344443234443333221  3699


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      ++|.++|
T Consensus        95 ~li~~Ag  101 (278)
T 2bgk_A           95 IMFGNVG  101 (278)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.55  E-value=0.00026  Score=60.18  Aligned_cols=75  Identities=11%  Similarity=-0.036  Sum_probs=51.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCCe-eEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN--KFGFDD-AFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      ++++|+||+|++|...++.+...|++|++++++.++.+.+.+  ..+... .+|..   ++.+.+.+...  +++|++|.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~---~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQ---EPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCC---SHHHHHHHHHHHHSCCCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHH---HHHHHHHHHHHHhCCCCEEEE
Confidence            379999999999999999999999999999988765554431  234432 22322   33333332221  36999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        79 nAg   81 (254)
T 1zmt_A           79 NDI   81 (254)
T ss_dssp             ECC
T ss_pred             CCC
Confidence            887

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.54  E-value=0.00029  Score=59.47  Aligned_cols=77  Identities=21%  Similarity=0.059  Sum_probs=54.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-e--CCHHHHHHHHHHh-CCCeeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-A--GSKEKVNLLKNKF-GFDDAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~--~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      +++++|+|++|++|.+.++.+...|++|+++ .  ++.++.+.+.+++ +. .+.|......+.+.+.+.. +++|++|.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            4689999999999999999999999999999 6  8888777665455 32 2333333223333433332 36999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        79 ~Ag   81 (244)
T 1zmo_A           79 NDY   81 (244)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.54  E-value=0.00022  Score=62.23  Aligned_cols=80  Identities=18%  Similarity=0.326  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC---C-e--eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF---D-D--AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~---~-~--vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ++.+++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +.   . .  ..|..+.+++.+.+.+...  
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999988765544232   32   1 1  2344444233333333221  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +++|++|.++|
T Consensus       105 g~iD~lvnnAG  115 (297)
T 1xhl_A          105 GKIDILVNNAG  115 (297)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.54  E-value=0.00059  Score=58.34  Aligned_cols=81  Identities=12%  Similarity=0.170  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHhCCCee--EecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---EKVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~---~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+  |++|.+.++.+...|++|+++++++   +..+.+.+..+....  .|..+.+++.+.+.+...  ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46799999998  9999999999999999999999876   334444423343222  355554344444444432  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus        88 iD~lv~~Ag~   97 (265)
T 1qsg_A           88 FDGFVHSIGF   97 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.54  E-value=0.00041  Score=58.54  Aligned_cols=80  Identities=21%  Similarity=0.449  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCC-e--eEecCChhhHHHHHHHHC--CCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK----FGFD-D--AFNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~----~g~~-~--vi~~~~~~~~~~~i~~~~--~~~  227 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.++    .+.. .  ..|..+.+++.+.+.+..  .++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            467999999999999999999999999999999998776554422    3432 1  124444424444443322  136


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        86 ~d~vi~~Ag   94 (248)
T 2pnf_A           86 IDILVNNAG   94 (248)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.53  E-value=0.0003  Score=60.53  Aligned_cols=80  Identities=11%  Similarity=0.069  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh----CCC-e--eEecCCh----hhHHHHHHHHC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKF----GFD-D--AFNYKKE----PDLDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~----g~~-~--vi~~~~~----~~~~~~i~~~~  224 (347)
                      ++.+++|+||+|++|.+.++.+...|++|+++++ ++++.+.+.+++    +.. .  ..|..+.    +++.+.+.+..
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999 877665544333    432 1  1243332    24444333322


Q ss_pred             C--CCccEEEECCC
Q 019042          225 P--EGIDIYFENVG  236 (347)
Q Consensus       225 ~--~~~d~vid~~g  236 (347)
                      .  +++|++|.++|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  36999999988

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.53  E-value=0.00049  Score=58.03  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHH---HhCCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKN---KFGFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+|++|++|...++.+...|++|+++ .+++++.+.+.+   ..+.. .  ..|..+.+++.+.+.+...  ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999999999999998 455444433321   23432 1  2344443234333333221  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.52  E-value=0.00096  Score=55.80  Aligned_cols=79  Identities=15%  Similarity=0.284  Sum_probs=54.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +++++|+||+|++|...++.+...|++|++++++.++.+.+.+++    +...   ..|..+.+++.+.+.+...  +++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            678999999999999999999999999999999988766554332    3321   1344443233222222111  369


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus        82 d~li~~Ag   89 (235)
T 3l77_A           82 DVVVANAG   89 (235)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCc
Confidence            99999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.51  E-value=0.0012  Score=55.45  Aligned_cols=78  Identities=15%  Similarity=0.136  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee--EecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.++......  .|..+.+++.+.+.+  -+++|++|.+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~   83 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGG--IGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT--CCCCSEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHH--cCCCCEEEEC
Confidence            467999999999999999999999999999999998876655533322222  344443123222321  1368999999


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      +|
T Consensus        84 Ag   85 (244)
T 1cyd_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            88

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.50  E-value=0.00044  Score=60.27  Aligned_cols=80  Identities=9%  Similarity=0.206  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC-e--eEecCChhhHHHHHHHHC--CCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD-D--AFNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~--~~~  227 (347)
                      ++.+++|+||+|++|...+..+...|++|++++++.++.+.+.+++    +.. .  ..|..+.+++.+.+.+..  .+.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999999987765444233    432 1  234444323444333321  136


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999988

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.50  E-value=0.00059  Score=57.58  Aligned_cols=80  Identities=16%  Similarity=0.190  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--Cee--Eec--CChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF--DDA--FNY--KKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~v--i~~--~~~~~~~~~i~~~~~--  225 (347)
                      ++++++|+|++|++|...++.+...|++|++++++.++.+.+.+++   +.  ..+  +|.  .+.+++.+.+.+...  
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999988776654332   21  122  232  232233333332221  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +++|++|.++|
T Consensus        93 g~id~lv~nAg  103 (247)
T 3i1j_A           93 GRLDGLLHNAS  103 (247)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            36999999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.48  E-value=0.0004  Score=59.93  Aligned_cols=81  Identities=14%  Similarity=0.220  Sum_probs=55.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-------------CHHHHHHHHHH---hCCC---eeEecCChhhH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-------------SKEKVNLLKNK---FGFD---DAFNYKKEPDL  216 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-------------~~~~~~~~~~~---~g~~---~vi~~~~~~~~  216 (347)
                      -+|++++|+|++|++|.+.++.+...|++|+++++             +.++.+.+.+.   .|..   ...|..+.+++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            35789999999999999999999999999999987             55555544322   2332   12354454234


Q ss_pred             HHHHHHHCC--CCccEEEECCC
Q 019042          217 DAALKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       217 ~~~i~~~~~--~~~d~vid~~g  236 (347)
                      .+.+.+...  +++|++|.++|
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg  114 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAG  114 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            333333221  36999999988

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.48  E-value=0.00011  Score=61.85  Aligned_cols=96  Identities=17%  Similarity=0.129  Sum_probs=63.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .+|||+||+|++|...++.+...| ++|+++++++++.+.+. ..++. ...|..+.+++.+.+.     ++|+||.+.+
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vv~~a~   97 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQ-----GQDIVYANLT   97 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHT-----TCSEEEEECC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhc-----CCCEEEEcCC
Confidence            579999999999999999999999 79999999887543222 11221 1234444323333332     4899999988


Q ss_pred             ch----hHHHHHHhhccC--CEEEEEcccc
Q 019042          237 GK----MLDAVLLNMRIH--GRIAVCGMIS  260 (347)
Q Consensus       237 ~~----~~~~~~~~l~~~--G~~v~~g~~~  260 (347)
                      ..    ..+.++..++..  +++|.+++..
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           98 GEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             STTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            64    234455555543  6899887643

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.48  E-value=0.00032  Score=59.83  Aligned_cols=80  Identities=16%  Similarity=0.197  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHh---CCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKNKF---GFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +++++||+||+|++|.+.++.+...|++|+++ .++.++.+.+.+++   +...   ..|..+.+++.+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987 77777665554333   3321   2344444234333333321  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        83 id~lv~nAg   91 (258)
T 3oid_A           83 LDVFVNNAA   91 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999997

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.47  E-value=0.00037  Score=59.33  Aligned_cols=79  Identities=11%  Similarity=0.204  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK--VNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~--~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +++++|+|++|++|.+.++.+...|++|++++++.++  .+.+.+++   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999998899999999988766  44433233   332 1  2344444233333333221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        82 iD~lv~nAg   90 (258)
T 3a28_C           82 FDVLVNNAG   90 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.47  E-value=0.0014  Score=52.54  Aligned_cols=93  Identities=13%  Similarity=0.092  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeE-ecCChhhHHHHHHHHCC-CCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAF-NYKKEPDLDAALKRCFP-EGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~-~~~d~vid~  234 (347)
                      +++|+|.|+ |.+|...++.++.. |.+|+++++++++.+.++ +.|...+. |..+.    +.+.+.++ .++|++|.+
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~----~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDP----DFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCH----HHHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCH----HHHHhccCCCCCCEEEEe
Confidence            568999995 99999999999998 999999999999988888 77875332 33332    23344312 369999999


Q ss_pred             CCch-hHHHHHHhh---ccCCEEEEE
Q 019042          235 VGGK-MLDAVLLNM---RIHGRIAVC  256 (347)
Q Consensus       235 ~g~~-~~~~~~~~l---~~~G~~v~~  256 (347)
                      +++. ....+...+   .+..+++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          113 MPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9863 333333333   344566543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.46  E-value=0.00046  Score=58.99  Aligned_cols=80  Identities=25%  Similarity=0.381  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CC-e--eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASG-AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---G-FD-D--AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g-~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g-~~-~--vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      ++++++|+|++| ++|...++.+...|++|++++++.++.+.+.+++   + .. .  ..|..+.+++.+.+.+...  +
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            578999999975 8999999999999999999999988766655444   2 11 1  2344444234443333321  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      .+|++|.++|
T Consensus       101 ~id~li~~Ag  110 (266)
T 3o38_A          101 RLDVLVNNAG  110 (266)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            6999999998

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.46  E-value=0.00048  Score=59.53  Aligned_cols=81  Identities=11%  Similarity=0.190  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh----CCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKF----GFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~----g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      .++++||+||+|++|.+.++.+...|++|+++++ +.++.+.+.+++    +...   ..|..+.+++.+.+.+...  +
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4689999999999999999999999999999998 555544443233    2221   1344444234443333321  3


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|++|.++|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999883

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.46  E-value=0.00042  Score=58.71  Aligned_cols=81  Identities=21%  Similarity=0.295  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999999987665443232   432 1  2344443233333332211  369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |++|.++|.
T Consensus        90 d~vi~~Ag~   98 (255)
T 1fmc_A           90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.46  E-value=0.00057  Score=59.63  Aligned_cols=80  Identities=16%  Similarity=0.254  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCC-e--eEecCChhhHHHHHHHHCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF--------GFD-D--AFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~--------g~~-~--vi~~~~~~~~~~~i~~~~~  225 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++        +.. .  ..|..+.+++.+.+.+...
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999987765544232        221 1  1344443234333333221


Q ss_pred             --CCccEEEECCC
Q 019042          226 --EGIDIYFENVG  236 (347)
Q Consensus       226 --~~~d~vid~~g  236 (347)
                        +++|++|.++|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              36999999998

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.46  E-value=0.00056  Score=56.42  Aligned_cols=91  Identities=16%  Similarity=0.120  Sum_probs=63.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      +|+|+||+|.+|...++.+...|.+|+++++++++.+.+.  .+... ..|..+. +. +.   +  +++|+||.++|..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~-~~-~~---~--~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL-TL-SD---L--SDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC-CH-HH---H--TTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh-hh-hh---h--cCCCEEEECCcCC
Confidence            6999999999999999999999999999999987765442  22221 2333333 22 22   2  2599999999852


Q ss_pred             ---------hHHHHHHhhccC--CEEEEEccc
Q 019042          239 ---------MLDAVLLNMRIH--GRIAVCGMI  259 (347)
Q Consensus       239 ---------~~~~~~~~l~~~--G~~v~~g~~  259 (347)
                               ....+++.++..  ++++.+++.
T Consensus        73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             ccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence                     234556666554  688888764

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.45  E-value=0.00096  Score=60.50  Aligned_cols=101  Identities=15%  Similarity=0.181  Sum_probs=73.3

Q ss_pred             hHHHHhhhhcC-CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHH
Q 019042          144 TAYGGLYELCS-PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       144 tA~~~l~~~~~-~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~  222 (347)
                      ..+.++.+..+ .-.|.+|.|.| .|.+|...++.++..|++|+++.+++.+...+. ..|... .      ++.+.+. 
T Consensus       196 slldgi~ratg~~L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~-~------sL~eal~-  265 (436)
T 3h9u_A          196 SLVDGIKRATDVMIAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQV-L------LVEDVVE-  265 (436)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C------CHHHHTT-
T ss_pred             HHHHHHHHhcCCcccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCee-c------CHHHHHh-
Confidence            33444433323 34689999999 599999999999999999999999987766666 666532 1      3333333 


Q ss_pred             HCCCCccEEEECCCch-hHH-HHHHhhccCCEEEEEcc
Q 019042          223 CFPEGIDIYFENVGGK-MLD-AVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       223 ~~~~~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~  258 (347)
                          ..|+++.+.+.. .+. ..+..|+++..++.++.
T Consensus       266 ----~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          266 ----EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             ----TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             ----hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence                389999988763 333 56788999999998874

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.44  E-value=0.00047  Score=59.66  Aligned_cols=80  Identities=16%  Similarity=0.182  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC----------------HHHHHHHHHHh---CCCe---eEecCChh
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS----------------KEKVNLLKNKF---GFDD---AFNYKKEP  214 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~----------------~~~~~~~~~~~---g~~~---vi~~~~~~  214 (347)
                      .|++++|+||++++|.+.++.+...|++|++++++                .++.+.+.+.+   +...   ..|..+.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            57899999999999999999999999999999876                55554443222   3321   23444542


Q ss_pred             hHHHHHHHHCC--CCccEEEECCC
Q 019042          215 DLDAALKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       215 ~~~~~i~~~~~--~~~d~vid~~g  236 (347)
                      ++.+.+.+...  +++|++|.++|
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg  113 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCc
Confidence            34333333221  36999999988

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.44  E-value=0.00057  Score=59.12  Aligned_cols=78  Identities=23%  Similarity=0.267  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe----eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD----AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~----vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++   .+...    ..|..+.+++.+.+.+...  ++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999999999998876654422   34321    1344443233333332211  36


Q ss_pred             ccEEEEC
Q 019042          228 IDIYFEN  234 (347)
Q Consensus       228 ~d~vid~  234 (347)
                      +|++|.+
T Consensus       107 iD~li~n  113 (286)
T 1xu9_A          107 LDMLILN  113 (286)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEC
Confidence            9999998

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.44  E-value=0.00069  Score=57.65  Aligned_cols=80  Identities=20%  Similarity=0.267  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHh-----CCC-e--eEecCChhhHHHHHHHHC-
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKL---VGCYVVGSAGSKEKVNLLKNKF-----GFD-D--AFNYKKEPDLDAALKRCF-  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~---~G~~V~~~~~~~~~~~~~~~~~-----g~~-~--vi~~~~~~~~~~~i~~~~-  224 (347)
                      ++++++|+|++|++|.+.++.+..   .|++|++++++.++.+.+.+++     +.. .  ..|..+.+++.+.+.+.. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            367899999999999999988887   8999999999988766554343     332 1  234444424444444432 


Q ss_pred             ---CCCcc--EEEECCC
Q 019042          225 ---PEGID--IYFENVG  236 (347)
Q Consensus       225 ---~~~~d--~vid~~g  236 (347)
                         .+.+|  ++|.++|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence               23577  9999876

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.43  E-value=0.00033  Score=59.02  Aligned_cols=100  Identities=22%  Similarity=0.291  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCCe---eEecCChhhHHHHHHHHC-CCCccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--EKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCF-PEGIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~--~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~-~~~~d~  230 (347)
                      +|++++|+|+++|+|.+.++.+...|++|+++.++.  +..+.++ +.|...   ..|..++ +   .+++.. .+++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~---~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-L---AAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-T---TTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-H---HHHHHHHhCCCCE
Confidence            589999999999999999999999999999999874  3445565 666532   2333332 1   122222 247999


Q ss_pred             EEECCCch--------------------------hHHHHHHhh-c--cCCEEEEEccccc
Q 019042          231 YFENVGGK--------------------------MLDAVLLNM-R--IHGRIAVCGMISQ  261 (347)
Q Consensus       231 vid~~g~~--------------------------~~~~~~~~l-~--~~G~~v~~g~~~~  261 (347)
                      +++++|..                          ..+.++..| +  .+|++|.+++..+
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            99999831                          123345545 2  3589999987654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.43  E-value=0.00012  Score=62.00  Aligned_cols=76  Identities=16%  Similarity=0.142  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCC--CCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP--EGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--~~~d~vid~  234 (347)
                      ++++++|+|++|++|...++.+...|++|++++++.++.+.+.   +  ...|..+.+++.+.+.+...  +++|++|.+
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999999998765432111   1  23455554234333333221  368999999


Q ss_pred             CCc
Q 019042          235 VGG  237 (347)
Q Consensus       235 ~g~  237 (347)
                      .|.
T Consensus        89 Ag~   91 (247)
T 1uzm_A           89 AGL   91 (247)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            873

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.43  E-value=0.00026  Score=60.22  Aligned_cols=95  Identities=17%  Similarity=0.235  Sum_probs=61.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      ++++|+||+|++|..+++.+...|++|+++++++++.+       .....|..+.+++.+.+.+. .+++|++|.++|..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~Dl~~~~~v~~~~~~~-~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-------ADLSTAEGRKQAIADVLAKC-SKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------CCTTSHHHHHHHHHHHHTTC-TTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-------cccccCCCCHHHHHHHHHHh-CCCCCEEEECCCCC
Confidence            37999999999999999999999999999998765321       01112222211222222222 24689999998742


Q ss_pred             h-------------------HHHHHHhhccC--CEEEEEccccc
Q 019042          239 M-------------------LDAVLLNMRIH--GRIAVCGMISQ  261 (347)
Q Consensus       239 ~-------------------~~~~~~~l~~~--G~~v~~g~~~~  261 (347)
                      .                   .+.++..++..  |++|.+++...
T Consensus        74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence            2                   33455555443  89999987554

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.43  E-value=0.00044  Score=58.60  Aligned_cols=76  Identities=17%  Similarity=0.295  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHC--CCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCF--PEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~vid  233 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.+.    + ..+.. ...|..+.+++.+.+.+..  .+++|++|.
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46799999999999999999999999999999987542    2 33421 1234444424444444332  136999999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      ++|.
T Consensus        81 ~Ag~   84 (250)
T 2fwm_X           81 AAGI   84 (250)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.43  E-value=0.00028  Score=60.82  Aligned_cols=78  Identities=14%  Similarity=0.141  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe---eEecCChhhHHH---HHHHHCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD---AFNYKKEPDLDA---ALKRCFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~---~i~~~~~~~  227 (347)
                      +|++++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|..+.++..+   .+.+.  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--AP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CC
Confidence            5789999999999999999999999999999999876554443232   4321   223333323333   33333  46


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus       110 iD~lvnnAg  118 (275)
T 4imr_A          110 VDILVINAS  118 (275)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.42  E-value=0.001  Score=57.61  Aligned_cols=77  Identities=18%  Similarity=0.161  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC-eeEecCChhhHHHHHHHHCCCCccE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD-DAFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      -++++++|+|++|++|.+++..+...|++|+++.++.++.+.+.+++    +.. ...|..+. +   .+.+... .+|+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~-~~Dv  191 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-A---SRAEAVK-GAHF  191 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-H---HHHHHTT-TCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-H---HHHHHHH-hCCE
Confidence            36789999999999999999999999999999999988766554333    322 23454443 1   2333222 3899


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +|+|+|.
T Consensus       192 lVn~ag~  198 (287)
T 1lu9_A          192 VFTAGAI  198 (287)
T ss_dssp             EEECCCT
T ss_pred             EEECCCc
Confidence            9999973

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.42  E-value=0.00089  Score=55.41  Aligned_cols=92  Identities=12%  Similarity=-0.016  Sum_probs=63.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+. ..+... ..|..+. +. +.   +  +++|+||.++|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~-~~---~--~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE-AD---L--DSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH-HH---H--TTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH-hh---c--ccCCEEEECCccC
Confidence            5999999999999999999999999999999988766543 233321 2344333 22 22   2  2599999999751


Q ss_pred             -----------hHHHHHHhhcc-CCEEEEEccc
Q 019042          239 -----------MLDAVLLNMRI-HGRIAVCGMI  259 (347)
Q Consensus       239 -----------~~~~~~~~l~~-~G~~v~~g~~  259 (347)
                                 ....+++.++. ++++|.+++.
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                       23444454443 4788888654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.41  E-value=0.00037  Score=59.82  Aligned_cols=81  Identities=16%  Similarity=0.208  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|++|.+.++.+...|++|+++.+ +.++.+.+.+   ..+...   ..|..+.+++.+.+.+...  ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999887 5554444332   234321   2344444233333333321  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus       107 id~lv~nAg~  116 (269)
T 4dmm_A          107 LDVLVNNAGI  116 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.41  E-value=0.00035  Score=59.31  Aligned_cols=81  Identities=20%  Similarity=0.296  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++ .++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999987 55544333232   432 1  2344443234444433221  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.40  E-value=0.0018  Score=56.55  Aligned_cols=96  Identities=14%  Similarity=0.062  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC---HHHHHHHHHHh----CC-CeeEecCChhhHHHHHHHHCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGS---KEKVNLLKNKF----GF-DDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~---~~~~~~~~~~~----g~-~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ++++++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.+++    +. ..++++++.+++.+.+.     .
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----~  226 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----E  226 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----T
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----C
Confidence            6889999996 9999999999999999 89999999   77766554343    22 13455554213444443     3


Q ss_pred             ccEEEECCCchhH------HH-HHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGGKML------DA-VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~~~~------~~-~~~~l~~~G~~v~~g~  258 (347)
                      +|+||+|+.-...      .. ....++++..++.+-.
T Consensus       227 aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY  264 (315)
T 3tnl_A          227 SVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY  264 (315)
T ss_dssp             CSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCC
T ss_pred             CCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEecc
Confidence            8999999863211      00 2334666666666544

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.40  E-value=0.00058  Score=58.80  Aligned_cols=80  Identities=20%  Similarity=0.289  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCC-e--eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFD-D--AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      ++++++|+|++|++|...+..+...|++|++++++.++.+.+.+   ..+.. .  ..|..+.+++.+.+.+...  +.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999888889999999987654333321   33432 1  2344443234444433221  359


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |++|.++|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999887

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.39  E-value=0.00074  Score=58.24  Aligned_cols=80  Identities=16%  Similarity=0.203  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHH---HhCCCe---eEecCChhhHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KEKVNLLKN---KFGFDD---AFNYKKEPDLDA  218 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~~---vi~~~~~~~~~~  218 (347)
                      ++++++|+|++|++|.+.++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+.+++.+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            47899999999999999999999999999999986            443333221   334321   234444423433


Q ss_pred             HHHHHCC--CCccEEEECCC
Q 019042          219 ALKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       219 ~i~~~~~--~~~d~vid~~g  236 (347)
                      .+.+...  +++|++|.++|
T Consensus        89 ~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHHHHhcCCCCEEEECCC
Confidence            3333221  36999999988

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.39  E-value=0.00037  Score=59.22  Aligned_cols=80  Identities=21%  Similarity=0.261  Sum_probs=55.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      |++++|+|+++++|.+.++.+...  |++|+.+.+++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            578999999999999888777665  5799999999988877765665421   2344444233333333221  36999


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      ++.++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999873

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.39  E-value=0.00075  Score=58.83  Aligned_cols=80  Identities=13%  Similarity=0.179  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHH---HhCCCe---eEecCChhhHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KEKVNLLKN---KFGFDD---AFNYKKEPDLDA  218 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~~---vi~~~~~~~~~~  218 (347)
                      +|++++|+||++++|.+.++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+.+++.+
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999876            444443321   334321   234444423433


Q ss_pred             HHHHHCC--CCccEEEECCC
Q 019042          219 ALKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       219 ~i~~~~~--~~~d~vid~~g  236 (347)
                      .+.+...  +++|++|.++|
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHhCCCCEEEECCC
Confidence            3333221  36999999987

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.38  E-value=0.00059  Score=57.42  Aligned_cols=79  Identities=14%  Similarity=0.146  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-------EEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC-------YVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~-------~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~  224 (347)
                      +++++|+||+|++|...++.+...|+       +|+++.++.++.+.+.+++   +.. .  ..|..+.+++.+.+.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999998888899       9999999988766554343   332 1  234444323333333322


Q ss_pred             --CCCccEEEECCC
Q 019042          225 --PEGIDIYFENVG  236 (347)
Q Consensus       225 --~~~~d~vid~~g  236 (347)
                        .+++|++|.++|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              136999999987

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.37  E-value=8.1e-05  Score=62.60  Aligned_cols=98  Identities=18%  Similarity=0.155  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee--EecCChhhHHHH---HHHHCC-CCccEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA--FNYKKEPDLDAA---LKRCFP-EGIDIY  231 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~---i~~~~~-~~~d~v  231 (347)
                      +.+++|+||+|++|.+.++.+...|++|+++++++++.+      +....  .|..+.+++.+.   +.+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999999999999999999999999999998865421      10111  122222122222   222222 469999


Q ss_pred             EECCCc--------h----h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          232 FENVGG--------K----M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       232 id~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      |.++|.        +    .               .+.+...++.+|+++.+++...
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  133 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  133 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            999982        1    0               2334455556789999887543

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.37  E-value=0.00062  Score=59.14  Aligned_cols=80  Identities=14%  Similarity=0.140  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHh----CCC-e--eEecCChh--------------
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKNKF----GFD-D--AFNYKKEP--------------  214 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~~~----g~~-~--vi~~~~~~--------------  214 (347)
                      ++++++|+|++|++|.+.++.+...|++|++++ ++.++.+.+.+++    +.. .  ..|..+.+              
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   87 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence            467999999999999999999999999999999 9887765554333    322 1  23444432              


Q ss_pred             ---hHHHHHHHHCC--CCccEEEECCC
Q 019042          215 ---DLDAALKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       215 ---~~~~~i~~~~~--~~~d~vid~~g  236 (347)
                         ++.+.+.+...  +++|++|.++|
T Consensus        88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg  114 (291)
T 1e7w_A           88 LFTRCAELVAACYTHWGRCDVLVNNAS  114 (291)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence               33333332211  36999999997

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.37  E-value=0.00057  Score=60.21  Aligned_cols=80  Identities=21%  Similarity=0.262  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe---------CCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA---------GSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~---------~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      .|.+++|+|++|++|..+++.+...|++|++++         ++.++.+.+.+   ..+...+.|..+..+..+.+.+..
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999964         34454433322   234444566665434333333321


Q ss_pred             --CCCccEEEECCC
Q 019042          225 --PEGIDIYFENVG  236 (347)
Q Consensus       225 --~~~~d~vid~~g  236 (347)
                        .+++|++|.++|
T Consensus        88 ~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHTSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence              136999999987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.36  E-value=0.00039  Score=60.25  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHHhCCCe---eEecCChhhHHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-----------VNLLKNKFGFDD---AFNYKKEPDLDAALKR  222 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-----------~~~~~~~~g~~~---vi~~~~~~~~~~~i~~  222 (347)
                      ++++++|+||++++|.+.++.+...|++|++++++.++           .+.++ ..+...   ..|..+.+++.+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999987652           22333 445421   2344454234333333


Q ss_pred             HCC--CCccEEEECCC
Q 019042          223 CFP--EGIDIYFENVG  236 (347)
Q Consensus       223 ~~~--~~~d~vid~~g  236 (347)
                      ...  +++|++|.++|
T Consensus        87 ~~~~~g~id~lvnnAg  102 (285)
T 3sc4_A           87 TVEQFGGIDICVNNAS  102 (285)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            321  36999999988

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.36  E-value=0.00059  Score=57.64  Aligned_cols=77  Identities=21%  Similarity=0.335  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ++++++|+||+|++|...++.+...|++|+++++++++.+.+. ++.-..  ..|..+.+++. .+.+.. +++|++|.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQID-QFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHH-HHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHH-HHHHHh-CCCCEEEEC
Confidence            4689999999999999999999999999999999987765444 332111  23444442333 333222 369999999


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      +|
T Consensus        82 Ag   83 (246)
T 2ag5_A           82 AG   83 (246)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.36  E-value=0.00082  Score=57.35  Aligned_cols=81  Identities=20%  Similarity=0.342  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHH---HCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKR---CFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~---~~~~~  227 (347)
                      ++.+++|+||+|++|...++.+...|++|+++.+++++.+.+.+++   +.. .  ..|..+.+++.+.+.+   ..+++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999999999999999999987665543232   432 1  2344443233333332   22246


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999873

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.35  E-value=0.0005  Score=58.83  Aligned_cols=74  Identities=18%  Similarity=0.261  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      ++.+++|+||+|++|...++.+...|++|+++++++++      .-... ...|..+.+++.+.+.+...  +++|++|.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            36799999999999999999999999999999987543      00111 12344444234433333221  36999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        81 ~Ag   83 (264)
T 2dtx_A           81 NAG   83 (264)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.34  E-value=0.00092  Score=57.45  Aligned_cols=79  Identities=23%  Similarity=0.280  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHHhCCC---eeEecCChhhHHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK-----------VNLLKNKFGFD---DAFNYKKEPDLDAALKR  222 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~-----------~~~~~~~~g~~---~vi~~~~~~~~~~~i~~  222 (347)
                      ++++++|+|+++++|.+.++.+...|++|++++++.++           .+.++ ..+..   ...|..+.+++.+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999987542           12222 33442   12344444234333333


Q ss_pred             HCC--CCccEEEECCC
Q 019042          223 CFP--EGIDIYFENVG  236 (347)
Q Consensus       223 ~~~--~~~d~vid~~g  236 (347)
                      ...  +++|++|.++|
T Consensus        84 ~~~~~g~iD~lvnnAG   99 (274)
T 3e03_A           84 TVDTFGGIDILVNNAS   99 (274)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            321  36999999998

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.34  E-value=0.00047  Score=59.21  Aligned_cols=81  Identities=25%  Similarity=0.350  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHH---HhCCC-ee--EecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKN---KFGFD-DA--FNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~---~~g~~-~v--i~~~~~~~~~~~i~~~~~--~~  227 (347)
                      ++++++|+||+|++|...++.+...|++|++++++ ++..+.+.+   +.+.. .+  .|..+.+++.+.+.++..  ++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999984 444333332   33432 12  344443234444433321  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999883

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.34  E-value=0.0026  Score=48.59  Aligned_cols=93  Identities=16%  Similarity=0.121  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeE-ecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAF-NYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .++|+|.|. |.+|+..++.++..|.+|+++++++++.+.++ +.|...+. |..+. +   .+.+..-..+|.++-+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~~-~---~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAANE-E---IMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTSH-H---HHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCCH-H---HHHhcCcccCCEEEEECC
Confidence            467999995 99999999999999999999999999999888 77774322 22232 2   233321126899999998


Q ss_pred             chh----HHHHHHhhccCCEEEEE
Q 019042          237 GKM----LDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       237 ~~~----~~~~~~~l~~~G~~v~~  256 (347)
                      ...    +-...+.+.+..+++..
T Consensus        81 ~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           81 NGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             ChHHHHHHHHHHHHHCCCCeEEEE
Confidence            742    22334455566666644

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.33  E-value=0.00063  Score=57.77  Aligned_cols=81  Identities=22%  Similarity=0.252  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHH----HHHHHHhCCC-e--eEecCChhhHHHHHHHHC--
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKV----NLLKNKFGFD-D--AFNYKKEPDLDAALKRCF--  224 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~----~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--  224 (347)
                      ..+++++||+||+|++|...++.+...|++|++++ ++.++.    +.++ ..+.. .  ..|..+.+++.+.+.+..  
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999887 333322    2233 34432 1  234444323333333322  


Q ss_pred             CCCccEEEECCC
Q 019042          225 PEGIDIYFENVG  236 (347)
Q Consensus       225 ~~~~d~vid~~g  236 (347)
                      -+++|++|.++|
T Consensus        89 ~g~id~lv~~Ag  100 (256)
T 3ezl_A           89 VGEIDVLVNNAG  100 (256)
T ss_dssp             TCCEEEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            136999999988

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.32  E-value=0.00073  Score=59.79  Aligned_cols=45  Identities=18%  Similarity=0.119  Sum_probs=38.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKNK  201 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~~  201 (347)
                      ++.++||+||+|++|.++++.+...|++|++++ ++.++.+.+.++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~   90 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   90 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999 888776655433

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.32  E-value=0.00076  Score=59.53  Aligned_cols=79  Identities=19%  Similarity=0.312  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH---HhCCC-e--eEecCChhhHHHHHHHHCC-
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-----KEKVNLLKN---KFGFD-D--AFNYKKEPDLDAALKRCFP-  225 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-----~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~-  225 (347)
                      +++++|+||+|++|.+.++.+...|++|++++++     .++.+.+.+   ..+.. .  ..|..+.+++.+.+.+... 
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998775     334333331   23432 1  2344444244444443321 


Q ss_pred             -CCccEEEECCC
Q 019042          226 -EGIDIYFENVG  236 (347)
Q Consensus       226 -~~~d~vid~~g  236 (347)
                       +++|++|.++|
T Consensus        85 ~g~iD~lVnnAG   96 (324)
T 3u9l_A           85 DGRIDVLIHNAG   96 (324)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             36999999998

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.31  E-value=0.00098  Score=57.61  Aligned_cols=80  Identities=13%  Similarity=0.162  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhCCCe--eEecCChhhHHHHHHHHC--CCC
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKE---KVNLLKNKFGFDD--AFNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~--~~~  227 (347)
                      ++++++|+||+  |++|.+.++.+...|++|++++++.+   ..+.+.+..+...  ..|..+.+++.+.+.+..  -++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999998  89999999999999999999998864   3344432334322  234444423333333322  136


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus       100 iD~lv~~Ag  108 (285)
T 2p91_A          100 LDIIVHSIA  108 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.31  E-value=0.00067  Score=58.04  Aligned_cols=82  Identities=11%  Similarity=0.162  Sum_probs=55.2

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--
Q 019042          155 PKKGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKEK---VNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       155 ~~~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~~~---~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ..++++|+|+||+  +++|...++.+...|++|+++++++..   .+.+.++.+...  ..|..+.+++.+.+.+...  
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3468899999998  999999999999999999999887543   333332444322  2344444234443433321  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +++|++|.++|
T Consensus        91 g~id~lv~nAg  101 (271)
T 3ek2_A           91 DSLDGLVHSIG  101 (271)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            36999999987

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.31  E-value=0.0016  Score=55.06  Aligned_cols=73  Identities=29%  Similarity=0.349  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-EecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-FNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      -++++++|+||+|++|.+.++.+...|++|++++++++.   ++ +++.... .|. .. +....+.+..  ++|++|.+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~~   88 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVLN   88 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEEC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEEC
Confidence            357899999999999999999999999999999998743   33 4443222 233 21 4444444432  59999999


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      +|
T Consensus        89 Ag   90 (249)
T 1o5i_A           89 AG   90 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.30  E-value=0.00083  Score=55.52  Aligned_cols=95  Identities=13%  Similarity=0.168  Sum_probs=61.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch-
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-  238 (347)
                      +|+|+||+|.+|...++.+...|.+|+++++++++.+.    +.-..++..+-. +..+.+.+... ++|+||.++|.. 
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~~~~~~D~~-d~~~~~~~~~~-~~d~vi~~ag~~~   75 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ----YNNVKAVHFDVD-WTPEEMAKQLH-GMDAIINVSGSGG   75 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC----CTTEEEEECCTT-SCHHHHHTTTT-TCSEEEECCCCTT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh----cCCceEEEeccc-CCHHHHHHHHc-CCCEEEECCcCCC
Confidence            69999999999999999999999999999999865331    111122222111 21234444433 599999999852 


Q ss_pred             ---------hHHHHHHhhccC--CEEEEEcccc
Q 019042          239 ---------MLDAVLLNMRIH--GRIAVCGMIS  260 (347)
Q Consensus       239 ---------~~~~~~~~l~~~--G~~v~~g~~~  260 (347)
                               .....++.++..  +++|.+++..
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           76 KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                     123344444443  5888887744

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.30  E-value=0.00016  Score=60.94  Aligned_cols=100  Identities=14%  Similarity=0.141  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHH---HHCC-CCcc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALK---RCFP-EGID  229 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~---~~~~-~~~d  229 (347)
                      .++.+++|+|++|++|...++.+...|++|+++++++++.+      +...  ..|..+.+++.+.+.   +..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            35789999999999999999999999999999998765421      1011  123333212333222   2222 4699


Q ss_pred             EEEECCCc--------h-------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          230 IYFENVGG--------K-------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       230 ~vid~~g~--------~-------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ++|.++|.        +                   ..+.+...++.+|++|.+++...
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~  137 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  137 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH
Confidence            99999872        1                   01234445556799999887544

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.30  E-value=0.0032  Score=52.19  Aligned_cols=102  Identities=12%  Similarity=0.090  Sum_probs=70.3

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCC-eeEecCChhhHHHHHHHHCCC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFD-DAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      .+.+++.+||=+|  .+.|..++.+++..  +.+|++++.+++..+.+++.   .|.. .-+..... |..+.+..+..+
T Consensus        52 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~~~  128 (221)
T 3dr5_A           52 TNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLAND  128 (221)
T ss_dssp             SCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSCTT
T ss_pred             hCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhcCC
Confidence            3444566999888  57899999999986  67999999999987777643   3443 22333332 444444333234


Q ss_pred             CccEEEECCCc----hhHHHHHHhhccCCEEEEEc
Q 019042          227 GIDIYFENVGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       227 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .||+||-....    ..+..+.+.|+++|.++.-.
T Consensus       129 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn  163 (221)
T 3dr5_A          129 SYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD  163 (221)
T ss_dssp             CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred             CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence            79999865443    26788899999999998643

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.29  E-value=0.00078  Score=64.86  Aligned_cols=80  Identities=20%  Similarity=0.271  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---------SKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---------~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      .|++++|+||++++|.+.++.+...|++|+++++         +.++.+.+.+   ..+...+.|..+..+..+.+.+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999876         3333322221   345555566655434444444333


Q ss_pred             C--CCccEEEECCC
Q 019042          225 P--EGIDIYFENVG  236 (347)
Q Consensus       225 ~--~~~d~vid~~g  236 (347)
                      .  +.+|++|+++|
T Consensus        98 ~~~g~iDiLVnnAG  111 (613)
T 3oml_A           98 KAFGRVDILVNNAG  111 (613)
T ss_dssp             -------CEECCCC
T ss_pred             HHCCCCcEEEECCC
Confidence            2  36999999998

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.29  E-value=0.00086  Score=57.82  Aligned_cols=82  Identities=9%  Similarity=0.106  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCCe--eEecCChhhHHHHHHHHC--CCC
Q 019042          156 KKGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK--EKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       156 ~~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~--~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~--~~~  227 (347)
                      -++++++|+||+  +|+|...++.+...|++|++++++.  +..+.+.++.+...  ..|..+.+++.+.+.+..  .+.
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            357899999988  6699999999999999999999887  55565553444322  234444423444333332  136


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999873

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.26  E-value=0.001  Score=58.51  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHH---HhCCCe---eEecCChhhHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KEKVNLLKN---KFGFDD---AFNYKKEPDLDA  218 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~~---vi~~~~~~~~~~  218 (347)
                      +|+++||+||+|++|.+.++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+.+++.+
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999998765            444433321   334321   234444423444


Q ss_pred             HHHHHCC--CCccEEEECCC
Q 019042          219 ALKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       219 ~i~~~~~--~~~d~vid~~g  236 (347)
                      .+.+...  +++|++|.++|
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCC
Confidence            3433321  36999999988

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.26  E-value=0.00037  Score=60.27  Aligned_cols=95  Identities=14%  Similarity=0.094  Sum_probs=63.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|||+||+|.+|..+++.+... |.+|+++++++++...+. ..+... ..|..+.    +.+.+... ++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQ----ESMVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCH----HHHHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCH----HHHHHHHh-CCCEEEEeCCC
Confidence            4899999999999999998887 899999999987654333 233321 2344443    23333332 59999999884


Q ss_pred             h--------hHHHHHHhhccC--CEEEEEcccc
Q 019042          238 K--------MLDAVLLNMRIH--GRIAVCGMIS  260 (347)
Q Consensus       238 ~--------~~~~~~~~l~~~--G~~v~~g~~~  260 (347)
                      .        .....++.++..  +++|.+++..
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            1        234455555554  4888887643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.26  E-value=0.0003  Score=60.38  Aligned_cols=77  Identities=19%  Similarity=0.188  Sum_probs=52.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      -.++++|||+||+|++|.+.++.+...|++|++++++.++..    . ... ...|..+.+++.+.+.+...  +++|++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            346899999999999999999999999999999998865431    1 111 12455554234443333321  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.++|
T Consensus        86 v~nAg   90 (269)
T 3vtz_A           86 VNNAG   90 (269)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.25  E-value=0.0004  Score=59.27  Aligned_cols=74  Identities=12%  Similarity=0.203  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      +|++++|+||++|+|.+.++.+...|++|+++.++.++      .....  ...|..+.++....+.+...  +++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE------GLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            68999999999999999999999999999999987542      11111  12344444233333333221  3699999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      ++.|
T Consensus        84 nnAG   87 (261)
T 4h15_A           84 HMLG   87 (261)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.25  E-value=0.00078  Score=56.88  Aligned_cols=80  Identities=23%  Similarity=0.288  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      .+++++|+|++|++|.+.++.+...|++|+++.+ +.++.+.+.+   ..+...   ..|..+.+++.+.+.+...  ++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999998876 4454444332   234321   2344443233333333221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|+++.++|
T Consensus        83 id~lv~nAg   91 (246)
T 3osu_A           83 LDVLVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.24  E-value=0.00096  Score=57.34  Aligned_cols=78  Identities=14%  Similarity=0.199  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHH---HHHHCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAA---LKRCFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~---i~~~~~~~  227 (347)
                      +|++++|+||+|++|.+.++.+...|++|+++++++...+.++ ++   +.. .  ..|..+.++..+.   +.+.  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~--g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADLEGAANVAEELAAT--RR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc--CC
Confidence            4789999999999999999999999999999997654333333 33   321 1  2344443222222   2222  46


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus       107 iD~lv~nAg~  116 (273)
T 3uf0_A          107 VDVLVNNAGI  116 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999873

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.22  E-value=0.0012  Score=56.63  Aligned_cols=82  Identities=20%  Similarity=0.173  Sum_probs=54.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHCC--
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ..++.+++|+||+|++|.+.++.+...|++|+++ .++.++.+.+.+.   .+.. .  ..|..+.+++.+.+.+...  
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4467899999999999999999999999999877 6666655544322   2332 1  2344443234333333321  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +++|++|.++|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.21  E-value=0.0013  Score=55.48  Aligned_cols=75  Identities=13%  Similarity=0.093  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHH-----HHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAA-----LKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~-----i~~~~~--~~~d  229 (347)
                      .+++++|+||+|++|.+.++.+.. |++|+++.++.++.+.+. +......+..    |+.+.     +.+...  +++|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~----D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIES----DIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEEC----CHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceec----ccchHHHHHHHHHHHHhcCCCC
Confidence            367999999999999988888766 999999999998877776 4322222221    22221     111111  2689


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|.++|.
T Consensus        78 ~lv~~Ag~   85 (245)
T 3e9n_A           78 TLVHAAAV   85 (245)
T ss_dssp             EEEECC--
T ss_pred             EEEECCCc
Confidence            99999984

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.21  E-value=0.00069  Score=55.15  Aligned_cols=96  Identities=14%  Similarity=0.118  Sum_probs=60.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      .+|+|+||+|.+|...++.+...|.+|+++++++++.+... ..+.. ...|..+.+++.+.+    . ++|+||.+++.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~----~-~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTV----A-GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHH----T-TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHH----c-CCCEEEECccC
Confidence            58999999999999999999999999999999876542211 11111 112333331232222    2 48999999884


Q ss_pred             hh-----------HHHHHHhhcc--CCEEEEEcccc
Q 019042          238 KM-----------LDAVLLNMRI--HGRIAVCGMIS  260 (347)
Q Consensus       238 ~~-----------~~~~~~~l~~--~G~~v~~g~~~  260 (347)
                      ..           ....++.++.  -++++.+++..
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence            21           2333444433  35888887654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.20  E-value=0.0012  Score=55.84  Aligned_cols=105  Identities=18%  Similarity=0.129  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCH--HHHHHHHHHh-CCC-e--eEecCCh-hhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSK--EKVNLLKNKF-GFD-D--AFNYKKE-PDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~--~~~~~~~~~~-g~~-~--vi~~~~~-~~~~~~i~~~~~--~  226 (347)
                      ++.+++|+||+|++|...++.+...|++ |++++++.  +..+.+.+.. +.. .  ..|..+. +++.+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4679999999999999999999999996 89888875  3444444222 221 1  1343332 244443433221  3


Q ss_pred             CccEEEECCCc---hh---------------HHHHHHhhcc-----CCEEEEEccccc
Q 019042          227 GIDIYFENVGG---KM---------------LDAVLLNMRI-----HGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  261 (347)
                      ++|++|.++|.   +.               .+.++..+..     +|++|.+++...
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence            69999999983   11               2334444432     588999887544

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.20  E-value=0.0021  Score=48.91  Aligned_cols=76  Identities=16%  Similarity=0.148  Sum_probs=53.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +++|+|+|+ |.+|...++.++..|.+|+++++++++.+.++ +.+.. ++..+.. + .+.+.+..-+++|+++.|++.
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~-~~~~d~~-~-~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATH-AVIANAT-E-ENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSE-EEECCTT-C-HHHHHTTTGGGCSEEEECCCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCE-EEEeCCC-C-HHHHHhcCCCCCCEEEECCCC
Confidence            467999997 99999999999999999999999988777665 45543 2322211 2 123333211369999999986


Q ss_pred             h
Q 019042          238 K  238 (347)
Q Consensus       238 ~  238 (347)
                      .
T Consensus        81 ~   81 (144)
T 2hmt_A           81 N   81 (144)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.18  E-value=0.0011  Score=56.64  Aligned_cols=80  Identities=23%  Similarity=0.301  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC-
Q 019042          157 KGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKE-----KVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP-  225 (347)
Q Consensus       157 ~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~~-----~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~-  225 (347)
                      ++++++|+||+  +++|...++.+...|++|++++++.+     ..+.+.+..+..   ...|..+.+++.+.+.+... 
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            47899999998  89999999999999999999987643     233333234542   12344444233333333321 


Q ss_pred             -CCccEEEECCC
Q 019042          226 -EGIDIYFENVG  236 (347)
Q Consensus       226 -~~~d~vid~~g  236 (347)
                       +++|++|.++|
T Consensus        99 ~g~id~li~nAg  110 (267)
T 3gdg_A           99 FGQIDAFIANAG  110 (267)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             36999999988

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.18  E-value=0.0016  Score=53.27  Aligned_cols=99  Identities=17%  Similarity=0.280  Sum_probs=69.9

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~  224 (347)
                      ....+.++++||-.|+ | .|..++.+++. +.+|++++.+++..+.+++.   .|.. .  ++..    |..+.+... 
T Consensus        49 ~~l~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~----d~~~~~~~~-  120 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG----TAPAALADL-  120 (204)
T ss_dssp             HHHCCCTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES----CTTGGGTTS-
T ss_pred             HhcCCCCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC----chhhhcccC-
Confidence            4467889999999994 4 48889999988 88999999999988777643   3443 2  2222    221111111 


Q ss_pred             CCCccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                       +.+|+|+...+.  ..+..+.+.|+++|+++....
T Consensus       121 -~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          121 -PLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             -CCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             -CCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence             269999976543  267888899999999987654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.17  E-value=0.001  Score=58.69  Aligned_cols=81  Identities=19%  Similarity=0.224  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC----------HHHHHHHHH---HhCCCe---eEecCChhhHHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS----------KEKVNLLKN---KFGFDD---AFNYKKEPDLDAA  219 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~----------~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~  219 (347)
                      -.|++++|+||+|++|.+.++.+...|++|++++++          .++.+.+.+   ..+...   ..|..+.+++.+.
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            357899999999999999999999999999999876          333333322   334321   1233443233333


Q ss_pred             HHHHCC--CCccEEEECCC
Q 019042          220 LKRCFP--EGIDIYFENVG  236 (347)
Q Consensus       220 i~~~~~--~~~d~vid~~g  236 (347)
                      +.+...  +++|++|.++|
T Consensus       105 ~~~~~~~~g~iD~lv~nAg  123 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAG  123 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            333221  36999999998

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.16  E-value=0.0008  Score=57.32  Aligned_cols=81  Identities=12%  Similarity=0.108  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHHhCCC---eeEecCChhhHHHHHHHHC--CCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN----LLKNKFGFD---DAFNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~----~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~  227 (347)
                      ++.+++|+||+|++|...++.+...|++|++++++.++..    .+.+..+..   ...|..+.+++.+.+.+..  -+.
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            3678999999999999999999999999999998543322    222123432   1234444423444443322  136


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|++|.++|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999873

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.16  E-value=0.00041  Score=57.63  Aligned_cols=94  Identities=16%  Similarity=0.139  Sum_probs=60.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      .+|+|+||+|.+|...++.+...|.+|+++++++++.+.+.  -+.. ...|..+.+++.+.+.     ++|+||.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCK-----GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHT-----TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhc-----CCCEEEEeCcC
Confidence            58999999999999999999999999999999977543211  1111 1123333312333332     49999999875


Q ss_pred             h------------hHHHHHHhhccC--CEEEEEccc
Q 019042          238 K------------MLDAVLLNMRIH--GRIAVCGMI  259 (347)
Q Consensus       238 ~------------~~~~~~~~l~~~--G~~v~~g~~  259 (347)
                      .            .....++.++..  +++|.+++.
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            3            123344444444  488888764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.14  E-value=0.00076  Score=56.78  Aligned_cols=78  Identities=19%  Similarity=0.219  Sum_probs=54.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh-CCC-e--eEecCChhhHHHHHHHH---CCC-C
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF-GFD-D--AFNYKKEPDLDAALKRC---FPE-G  227 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~-g~~-~--vi~~~~~~~~~~~i~~~---~~~-~  227 (347)
                      +.+++|+||+|++|...++.+...|  ++|++++++.++.+.++ ++ +.. .  ..|..+.+++.+.+.+.   .+. +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999  99999999988766665 44 221 1  23444432333333322   221 5


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        82 id~li~~Ag   90 (250)
T 1yo6_A           82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999886

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.14  E-value=0.0015  Score=54.84  Aligned_cols=102  Identities=14%  Similarity=0.147  Sum_probs=70.2

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHC---
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCF---  224 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~---  224 (347)
                      ....++++||-+|+  |.|..+..+++..  +.+|++++.+++..+.+++.+   |....+..... +..+.+.++.   
T Consensus        56 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGT--FTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECC--TTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHhhc
Confidence            44567889999984  4799999999987  579999999998887777432   54321222222 3333333221   


Q ss_pred             -----------C-CCccEEEECCCch----hHHHHHHhhccCCEEEEEc
Q 019042          225 -----------P-EGIDIYFENVGGK----MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       225 -----------~-~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g  257 (347)
                                 + +.+|+|+......    .+..+.+.|+++|.++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                       1 4699999876542    5678889999999998754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.12  E-value=0.0013  Score=55.42  Aligned_cols=95  Identities=17%  Similarity=0.261  Sum_probs=59.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      ++|+|+||+|++|..++..+...|++|++++++.++.+       .....|..+.+++.+.+.++ .+++|++|.++|..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-------ADLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------CCTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-------ccccCCcccHHHHHHHHHHc-CCCccEEEECCCCC
Confidence            37999999999999999999889999999998764321       01111221111233333333 24699999998731


Q ss_pred             h-------------------HHHHHHhhcc--CCEEEEEccccc
Q 019042          239 M-------------------LDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       239 ~-------------------~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      .                   ++.+...++.  .+++|.+++...
T Consensus        74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  117 (255)
T 2dkn_A           74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA  117 (255)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence            1                   1233334433  389998887543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.10  E-value=0.0014  Score=56.19  Aligned_cols=81  Identities=16%  Similarity=0.252  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHCC--C
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      .++++++|+||+|++|...++.+...|++|+++. ++.++.+...+.   .+.. .  ..|..+.+++.+.+.+...  +
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3567999999999999999999999999999998 555544333212   2322 1  2344444233333333221  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|++|.++|
T Consensus       103 ~id~li~nAg  112 (269)
T 3gk3_A          103 KVDVLINNAG  112 (269)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.10  E-value=0.0023  Score=54.07  Aligned_cols=103  Identities=11%  Similarity=0.058  Sum_probs=70.8

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCC-
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPE-  226 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~-  226 (347)
                      ....++.+||-+|+  |.|..++.+++..  +.+|++++.+++..+.+++.+   |...-+..... |..+.+...... 
T Consensus        59 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~~~  135 (248)
T 3tfw_A           59 VRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGECP  135 (248)
T ss_dssp             HHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCSCC
T ss_pred             HhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCCCC
Confidence            34567889999984  5688899999887  569999999999888777433   54321222222 444445444332 


Q ss_pred             CccEEEECCCc----hhHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFENVGG----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+|+|+-....    ..+..+.+.|+++|.++.-..
T Consensus       136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~  171 (248)
T 3tfw_A          136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV  171 (248)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            79999844332    267888899999999886543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.10  E-value=0.0011  Score=56.18  Aligned_cols=105  Identities=20%  Similarity=0.206  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHH---hCCC-ee--EecCChhhHHHHHHHH---C--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKEKVNLLKNK---FGFD-DA--FNYKKEPDLDAALKRC---F--  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~-~v--i~~~~~~~~~~~i~~~---~--  224 (347)
                      ++++++|+||++++|.+.++.+...|++|+++ .++.++.+.+.++   .+.. ..  .|..+..+....+.+.   .  
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            57899999999999999999999999999886 4454444333222   2332 11  2333321222222221   1  


Q ss_pred             --C-CCccEEEECCCch-----------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          225 --P-EGIDIYFENVGGK-----------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       225 --~-~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                        . +.+|++|.++|..           .               .+.++..++.+|++|.+++...
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence              1 2499999998731           1               1223334556789999887543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.09  E-value=0.0012  Score=56.18  Aligned_cols=77  Identities=17%  Similarity=0.143  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHC-CCCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCF-PEGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~-~~~~d~vi  232 (347)
                      ++++++|+||+|++|.+.++.+...|++|++++++.++  ..+ +++...   ..|..+.+++.+.+.... .+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED--VVA-DLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH--HHH-HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH--HHH-hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            46799999999999999999999999999999986543  233 555431   234444423333222211 13699999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      .++|
T Consensus        85 ~nAg   88 (257)
T 3tl3_A           85 NCAG   88 (257)
T ss_dssp             ECGG
T ss_pred             ECCC
Confidence            9998

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.09  E-value=0.0011  Score=55.48  Aligned_cols=103  Identities=13%  Similarity=0.089  Sum_probs=69.8

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHC-CC
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCF-PE  226 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~-~~  226 (347)
                      .....++++||-.|+  |.|..+..+++.. +.+|++++.+++..+.+++.+   |....+..... +..+.+.... .+
T Consensus        49 ~~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  125 (233)
T 2gpy_A           49 LLKMAAPARILEIGT--AIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELYP  125 (233)
T ss_dssp             HHHHHCCSEEEEECC--TTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTSC
T ss_pred             HHhccCCCEEEEecC--CCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccCC
Confidence            345567889999984  4788999999987 679999999999888777432   44211222121 2222222232 23


Q ss_pred             CccEEEECCCc----hhHHHHHHhhccCCEEEEEc
Q 019042          227 GIDIYFENVGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       227 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+|+|+.....    ..+..+.+.|+++|+++...
T Consensus       126 ~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          126 LFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             CEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            69999876653    36678888999999998753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.07  E-value=0.0064  Score=46.24  Aligned_cols=75  Identities=23%  Similarity=0.179  Sum_probs=56.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-EecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-FNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ..+++|.|+ |.+|...++.+...|.+|+++++++++.+.++ +.+...+ .|..+.    +.+.+..-.++|++|.+.+
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~~----~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTDE----SFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTCH----HHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCCH----HHHHhCCcccCCEEEEecC
Confidence            457999996 99999999999999999999999999988887 6665322 233332    2333332237999999998


Q ss_pred             ch
Q 019042          237 GK  238 (347)
Q Consensus       237 ~~  238 (347)
                      +.
T Consensus        80 ~~   81 (141)
T 3llv_A           80 DD   81 (141)
T ss_dssp             CH
T ss_pred             CH
Confidence            64

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.07  E-value=0.0019  Score=54.35  Aligned_cols=73  Identities=22%  Similarity=0.120  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      .+.+|+|+||+|.+|...++.+...  |.+|+++++++++.+.+.  -+.. ...|..+.+++.+.+    . ++|+||.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~----~-~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAF----Q-GIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHH----T-TCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCHHHHHHHH----c-CCCEEEE
Confidence            3578999999999999999999888  889999999887654321  1222 123444431233332    2 4899999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        76 ~a~   78 (253)
T 1xq6_A           76 LTS   78 (253)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            887

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.07  E-value=0.0017  Score=55.48  Aligned_cols=94  Identities=14%  Similarity=0.033  Sum_probs=69.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      .++.+||..|+ |. |..+..+++.. |.+|++++.+++..+.++ +.+.. ..+..+.. ++     ....+.+|+|+.
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~-~~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchh-hC-----CCCCCceeEEEE
Confidence            57889999994 55 99999999986 789999999999999888 55432 22222111 11     011236999997


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEcc
Q 019042          234 NVGGKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       234 ~~g~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ......+..+.+.|+++|+++....
T Consensus       155 ~~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          155 IYAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             eCChhhHHHHHHhcCCCcEEEEEEc
Confidence            5555688999999999999987754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.06  E-value=0.00078  Score=57.52  Aligned_cols=81  Identities=11%  Similarity=0.196  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH--HhCCC-e--eEecCChhhHHHHHHHH---C
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVG---CYVVGSAGSKEKVNLLKN--KFGFD-D--AFNYKKEPDLDAALKRC---F  224 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G---~~V~~~~~~~~~~~~~~~--~~g~~-~--vi~~~~~~~~~~~i~~~---~  224 (347)
                      .++.+++|+||+|++|...++.+...|   ++|++++++.++.+.+++  ..+.. .  ..|..+.+++.+.+.++   .
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            346799999999999999999999999   999999988764333331  22322 1  23444432444444332   2


Q ss_pred             CC-CccEEEECCC
Q 019042          225 PE-GIDIYFENVG  236 (347)
Q Consensus       225 ~~-~~d~vid~~g  236 (347)
                      +. ++|++|.++|
T Consensus        99 g~~~id~li~~Ag  111 (267)
T 1sny_A           99 KDQGLNVLFNNAG  111 (267)
T ss_dssp             GGGCCSEEEECCC
T ss_pred             CCCCccEEEECCC
Confidence            22 5999999987

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.06  E-value=0.005  Score=53.04  Aligned_cols=96  Identities=11%  Similarity=0.029  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC----CeeEecCChhhHHHHHHHHCCCCccE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGF----DDAFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      -++++++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++.    ..+...... ++.+.+.+     +|+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~~-----~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIAA-----ADG  197 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHHH-----SSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHhc-----CCE
Confidence            46789999996 9999999999999999 799999999887765435432    122222222 45555543     899


Q ss_pred             EEECCCchhH-----HHHHHhhccCCEEEEEcc
Q 019042          231 YFENVGGKML-----DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       231 vid~~g~~~~-----~~~~~~l~~~G~~v~~g~  258 (347)
                      ||+|+.....     ......++++..++.+-.
T Consensus       198 VInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY  230 (283)
T 3jyo_A          198 VVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVY  230 (283)
T ss_dssp             EEECSSTTSTTSCSCSSCGGGCCTTCEEEECCC
T ss_pred             EEECCCCCCCCCCCCCCCHHHhCCCCEEEEecC
Confidence            9999863210     111345666666666544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.03  E-value=0.0016  Score=55.46  Aligned_cols=80  Identities=18%  Similarity=0.207  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      .+++++|+||+|++|...++.+...|++|+++.++. +..+.+++.+   +..   ...|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999986654 3344444222   221   12344444244444443322  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999998

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=97.02  E-value=0.0024  Score=53.38  Aligned_cols=103  Identities=13%  Similarity=0.104  Sum_probs=70.1

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCC--
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ....++++||-+|+  +.|..++.+++..  +.+|++++.+++..+.+++.   .|....+..... +..+.+..+..  
T Consensus        68 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~~  144 (232)
T 3cbg_A           68 ISLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQGK  144 (232)
T ss_dssp             HHHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTSS
T ss_pred             HHhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcC
Confidence            34456789999984  5899999999987  56999999999888777633   254322222222 44444444321  


Q ss_pred             --CCccEEEECCCc----hhHHHHHHhhccCCEEEEEcc
Q 019042          226 --EGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 --~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                        +.+|+||-....    ..+..+.++|+++|.++.-..
T Consensus       145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~  183 (232)
T 3cbg_A          145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNV  183 (232)
T ss_dssp             SCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred             CCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence              469999854332    267888999999999987543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.99  E-value=0.0024  Score=51.93  Aligned_cols=63  Identities=14%  Similarity=0.211  Sum_probs=46.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +++|+||+|++|...++.+. .|++|++++++.+           ....|..+.+++.+.+.+.  +++|++|.++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            79999999999999999888 8999999998753           1223444442444445444  45899999987

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.98  E-value=0.00029  Score=60.18  Aligned_cols=76  Identities=18%  Similarity=0.152  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      +++++||+||+|++|.+.++.+...|++|++++++.++..    ..... ...|..+.+++.+.+.+...  +++|++|.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4689999999999999999999999999999998765321    11111 12344444233333333221  36999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus       103 nAg  105 (260)
T 3un1_A          103 NAG  105 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.98  E-value=0.0054  Score=51.82  Aligned_cols=103  Identities=17%  Similarity=0.245  Sum_probs=73.6

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHH
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRC  223 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~  223 (347)
                      +.....+.++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.   .|....++.... |+.    +.
T Consensus        85 i~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIY----EG  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGG----GC
T ss_pred             HHHhhCCCCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chh----hc
Confidence            335568899999999984 4 488999999985  56999999999888777743   254321222222 322    11


Q ss_pred             CCC-CccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          224 FPE-GIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       224 ~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+. .+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       158 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  195 (255)
T 3mb5_A          158 IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP  195 (255)
T ss_dssp             CCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             cCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence            233 69999987765  388999999999999987643

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.97  E-value=0.0047  Score=51.73  Aligned_cols=102  Identities=13%  Similarity=0.064  Sum_probs=68.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC---
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF---  224 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~---  224 (347)
                      ....++++||-+|  .+.|..++.+++..  +.+|++++.+++..+.+++.   .|...-+..... |..+.+..+.   
T Consensus        66 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  142 (237)
T 3c3y_A           66 LKLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQGQ  142 (237)
T ss_dssp             HHHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHST
T ss_pred             HHhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcc
Confidence            3445678999998  46788899999986  57999999999988777643   354321222222 3333333331   


Q ss_pred             --CCCccEEEECCCc----hhHHHHHHhhccCCEEEEEc
Q 019042          225 --PEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       225 --~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                        .+.+|+||-....    ..+..+.++|++||.++.-.
T Consensus       143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence              2469999865432    26788889999999988643

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.96  E-value=0.0038  Score=54.31  Aligned_cols=102  Identities=11%  Similarity=0.030  Sum_probs=71.2

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCC
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      +.....+.++++||-+|+  |.|..+..+++..|++|++++.+++..+.+++.+   |...-+..... |+.    ++ .
T Consensus        64 ~~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~  135 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE----EF-D  135 (302)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG----GC-C
T ss_pred             HHHHcCCCCcCEEEEeec--cCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH----Hc-C
Confidence            334567889999999994  4699999999998999999999998887777432   33211111111 221    12 3


Q ss_pred             CCccEEEECCCc----------------hhHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFENVGG----------------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+|+|+....-                ..+..+.++|+|+|++++...
T Consensus       136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            579999874321                356788889999999997665

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.96  E-value=0.002  Score=61.89  Aligned_cols=105  Identities=18%  Similarity=0.192  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH---------HHHHHHHH---HhCCCeeEecCChhhHHHHHHHHC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---------EKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~---------~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      .|++++|+||++|+|.+.++.+...|++|++.+++.         ++.+.+.+   ..|...+.|..+..+..+.+.+..
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999987543         33332221   335444555554323333332221


Q ss_pred             C--CCccEEEECCCch--------------------------hHHHHHHhhcc--CCEEEEEccccc
Q 019042          225 P--EGIDIYFENVGGK--------------------------MLDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       225 ~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      .  +.+|++++++|..                          ..+.++..|+.  +|++|.+++..+
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag  153 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG  153 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            1  3699999999831                          12445556643  589999987543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.95  E-value=0.0063  Score=58.38  Aligned_cols=104  Identities=21%  Similarity=0.187  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HH-HHHHHHHHhCCCeeEecCCh-hhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KE-KVNLLKNKFGFDDAFNYKKE-PDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~-~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||++|+|.+.++.+...|++|++..+. .+ -.+.++ +.|...+....+. .+..+.+.+...  +++|++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence            47899999999999999999999999999998743 22 233444 4454322222221 122222222211  369999


Q ss_pred             EECCCch--------------------------hHHHHHHhhc--cCCEEEEEccccc
Q 019042          232 FENVGGK--------------------------MLDAVLLNMR--IHGRIAVCGMISQ  261 (347)
Q Consensus       232 id~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  261 (347)
                      ++++|..                          ..+.++..|+  .+|++|.+++..+
T Consensus       400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag  457 (604)
T 2et6_A          400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG  457 (604)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            9999821                          1244555664  3589999987543

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.95  E-value=0.0051  Score=50.07  Aligned_cols=100  Identities=13%  Similarity=0.152  Sum_probs=70.1

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---hCCCe--eEecCChhhHHHHHHHHC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNK---FGFDD--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~--vi~~~~~~~~~~~i~~~~  224 (347)
                      ....+.++++||-.|+ | .|..++.+++.. ..+|++++.+++..+.+++.   .|...  ++..    +..+.+..  
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~----d~~~~~~~--  105 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA----FAPEGLDD--  105 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC----CTTTTCTT--
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC----Chhhhhhc--
Confidence            4468889999999994 4 588999999886 46999999999988777642   34322  2222    21111111  


Q ss_pred             CCCccEEEECCCc----hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+|+|+.....    ..+..+.+.|+++|+++....
T Consensus       106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            1359999987652    478888999999999997654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.95  E-value=0.017  Score=51.22  Aligned_cols=74  Identities=9%  Similarity=0.066  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHh------CCCee--EecCChhhHHHHHHHHCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----EKVNLLKNKF------GFDDA--FNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~----~~~~~~~~~~------g~~~v--i~~~~~~~~~~~i~~~~~  225 (347)
                      +.+|||+||+|.+|...++.+...|.+|++++++.    ...+.++ ..      .-...  .|..+.    +.+.+...
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~   99 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK-TLVSTEQWSRFCFIEGDIRDL----TTCEQVMK   99 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HTSCHHHHTTEEEEECCTTCH----HHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhh-hccccccCCceEEEEccCCCH----HHHHHHhc
Confidence            57999999999999999999999999999999843    3334443 22      11122  233333    23333333


Q ss_pred             CCccEEEECCCc
Q 019042          226 EGIDIYFENVGG  237 (347)
Q Consensus       226 ~~~d~vid~~g~  237 (347)
                       ++|+||.+++.
T Consensus       100 -~~d~Vih~A~~  110 (351)
T 3ruf_A          100 -GVDHVLHQAAL  110 (351)
T ss_dssp             -TCSEEEECCCC
T ss_pred             -CCCEEEECCcc
Confidence             59999999984

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.94  E-value=0.0026  Score=52.03  Aligned_cols=101  Identities=13%  Similarity=0.061  Sum_probs=68.7

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ....+.++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++.+   +...+ ..... |..+....  .+.
T Consensus        71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~~--~~~  143 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNV-STRHG-DGWQGWQA--RAP  143 (210)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGGGCCGG--GCC
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCce-EEEEC-CcccCCcc--CCC
Confidence            4467889999999994 4 68888888888 889999999999888777433   43221 11111 21111111  236


Q ss_pred             ccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+|+.+..- .....+.+.|+++|+++..-.
T Consensus       144 ~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          144 FDAIIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             EEEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             ccEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence            9999987654 344678899999999987643

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.94  E-value=0.0032  Score=55.65  Aligned_cols=78  Identities=13%  Similarity=0.050  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHhCCC-e--eEecCChhhHHHHHHHHCCCCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV----NLLKNKFGFD-D--AFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~----~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      .+.+|||+||+|.+|...++.+...|++|++++++.++.    +.+.+..+.. .  ..|..+.+++.+.+.+   .++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence            456899999999999999999999999999998764322    2222122322 1  2344443233333432   3699


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      +||.+++.
T Consensus        81 ~vih~A~~   88 (341)
T 3enk_A           81 AAIHFAAL   88 (341)
T ss_dssp             EEEECCCC
T ss_pred             EEEECccc
Confidence            99999974

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.94  E-value=0.00048  Score=58.54  Aligned_cols=74  Identities=16%  Similarity=0.157  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHC--CCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCF--PEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~vid  233 (347)
                      .+++++|+||+|++|.+.++.+...|++|++++++.++.+    +  .. ...|..+.+++.+.+.+..  .+.+|++|.
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~--~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----G--FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----T--SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----c--ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3679999999999999999999999999999998765422    1  11 1234444423433333322  136899999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        94 nAg   96 (253)
T 2nm0_A           94 NAG   96 (253)
T ss_dssp             ECS
T ss_pred             CCC
Confidence            887

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.93  E-value=0.0046  Score=54.18  Aligned_cols=102  Identities=15%  Similarity=0.130  Sum_probs=70.4

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCC
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      +.....+.++++||-+|+ | .|..+..+++..|++|++++.+++..+.+++.+   |....+..... |+.    ++ +
T Consensus        82 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~  153 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GWE----DF-A  153 (318)
T ss_dssp             HHTTSCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CGG----GC-C
T ss_pred             HHHhcCCCCcCEEEEEcc-c-chHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-ChH----HC-C
Confidence            334467789999999994 4 488899999888999999999999888887432   32211211111 221    11 2


Q ss_pred             CCccEEEEC-----CCc----hhHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFEN-----VGG----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+|+|+..     .+.    ..+..+.+.|+++|+++....
T Consensus       154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            469999876     331    367788899999999987654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.93  E-value=0.0021  Score=54.89  Aligned_cols=80  Identities=15%  Similarity=0.106  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHH---hCCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKNK---FGFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      .+++++|+||+|++|...++.+...|++|+++. ++.++.+.+.++   .+.. .  ..|..+.+++.+.+.+...  +.
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            467999999999999999999999999997654 555544433322   2332 2  2344444234333333221  36


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|++|.++|
T Consensus       105 id~li~nAg  113 (267)
T 4iiu_A          105 WYGVVSNAG  113 (267)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEECCC
Confidence            999999987

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.90  E-value=0.0027  Score=52.75  Aligned_cols=103  Identities=12%  Similarity=0.066  Sum_probs=69.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCC--
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ....++++||-.|+  +.|..++.+++..  +.+|++++.+++..+.+++.+   |...-+..... +..+.+..+..  
T Consensus        65 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~~~  141 (229)
T 2avd_A           65 ARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLAAG  141 (229)
T ss_dssp             HHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHTT
T ss_pred             HHhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHhcC
Confidence            45567889999984  4899999999876  569999999998877777433   44211222222 33333333321  


Q ss_pred             --CCccEEEECCCc----hhHHHHHHhhccCCEEEEEcc
Q 019042          226 --EGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 --~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                        +.+|+|+.....    ..+..+.++|+++|.++....
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence              369998865432    368888899999999987543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.90  E-value=0.0007  Score=56.81  Aligned_cols=98  Identities=14%  Similarity=0.108  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +.+|+|+||+|++|...++.+...|+  +|+++++++++.+... .-+... ..|..+.    +.+.+... ++|++|.+
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~   91 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFCC   91 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCH----HHHHHHhc-CCCEEEEC
Confidence            57899999999999999999999999  9999998765432221 112211 1233222    12222222 59999999


Q ss_pred             CCchh---------------HHHHHHhhccC--CEEEEEccccc
Q 019042          235 VGGKM---------------LDAVLLNMRIH--GRIAVCGMISQ  261 (347)
Q Consensus       235 ~g~~~---------------~~~~~~~l~~~--G~~v~~g~~~~  261 (347)
                      +|...               ....++.++..  +++|.+++...
T Consensus        92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            98521               12233334333  68998877543

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.90  E-value=0.0049  Score=49.70  Aligned_cols=97  Identities=12%  Similarity=0.069  Sum_probs=64.5

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHHHhCCCeeE---ecCChhhHHHH
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVG----------CYVVGSAGSKEKVNLLKNKFGFDDAF---NYKKEPDLDAA  219 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G----------~~V~~~~~~~~~~~~~~~~~g~~~vi---~~~~~~~~~~~  219 (347)
                      ..++++++||..|+ |. |..+..+++..|          .+|++++.++..      .......+   |..+. +....
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~-~~~~~   88 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDP-RTSQR   88 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSH-HHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCH-HHHHH
Confidence            34678999999994 55 999999999976          789999988632      11111222   22222 34444


Q ss_pred             HHHHCCC-CccEEEE-----CCCc-------------hhHHHHHHhhccCCEEEEEcc
Q 019042          220 LKRCFPE-GIDIYFE-----NVGG-------------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       220 i~~~~~~-~~d~vid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +....++ .+|+|+.     +.+.             ..+..+.+.|+++|+++....
T Consensus        89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            5555554 7999995     3231             346678889999999987643

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.88  E-value=0.0013  Score=56.50  Aligned_cols=95  Identities=18%  Similarity=0.230  Sum_probs=61.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|+|+||+|.+|...++.+...  |.+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||.+++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDE----AALTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCH----HHHHHHHh-CCCEEEEeCC
Confidence            4899999999999999988887  899999999877655554 444432 2344443    23333332 4899999987


Q ss_pred             ch------hHHHHHHhhcc-C-CEEEEEcccc
Q 019042          237 GK------MLDAVLLNMRI-H-GRIAVCGMIS  260 (347)
Q Consensus       237 ~~------~~~~~~~~l~~-~-G~~v~~g~~~  260 (347)
                      ..      .....++.++. + +++|.+++..
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            41      23344444433 3 5888877643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.88  E-value=0.00071  Score=57.06  Aligned_cols=100  Identities=15%  Similarity=0.092  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEeCCHH-HHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKE-KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~-~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ++++++|+||+|++|.+.++.+.. .|++|+.+.++++ ..+    .. .....|..+.+++.+.+.....+++|+++.+
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~----~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----NL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT----TE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc----cc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            467899999999999998877766 7889998887654 111    11 0112344444344444533333379999999


Q ss_pred             CCch-----------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          235 VGGK-----------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       235 ~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +|..           .               .+.+...++.+|++|.+++...
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            9841           1               1222334555789998877543

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.88  E-value=0.0028  Score=52.08  Aligned_cols=102  Identities=20%  Similarity=0.215  Sum_probs=70.2

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....+.++++||.+|+ | .|..+..+++..|  .+|++++.+++..+.+++.   .+...+ ..... +....+.  ..
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~  144 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVG-DGTLGYE--PL  144 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEES-CGGGCCG--GG
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--CC
Confidence            4457889999999994 4 6999999999886  7999999999887777643   243321 11111 2211111  02


Q ss_pred             CCccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+|+|+.+..- ...+.+.+.|+++|+++..-.
T Consensus       145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            369999987765 345788899999999987643

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.88  E-value=0.0073  Score=50.94  Aligned_cols=102  Identities=12%  Similarity=0.072  Sum_probs=68.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC---
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF---  224 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~---  224 (347)
                      ....++++||-+|  .+.|..++.+++..  +.+|++++.+++..+.+++.   .|...-+..... +..+.+..+.   
T Consensus        75 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  151 (247)
T 1sui_A           75 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKDE  151 (247)
T ss_dssp             HHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSG
T ss_pred             HHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhcc
Confidence            3445678999998  57899999999986  67999999999887777643   344221222222 3333333331   


Q ss_pred             --CCCccEEEECCCc----hhHHHHHHhhccCCEEEEEc
Q 019042          225 --PEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       225 --~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                        .+.||+||-....    ..+..+.++|++||.++.-.
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence              2469999854432    36788899999999998643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.87  E-value=0.0027  Score=51.78  Aligned_cols=73  Identities=21%  Similarity=0.245  Sum_probs=51.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee--EecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +++|+|++|++|...++.+...  +|+++++++++.+.+.++++. ..  .|..+.+++.+.+.+  .+++|++|.++|.
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~   76 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAVGK   76 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCCc
Confidence            6899999999999888877666  999999998877766545543 22  344443244444443  2469999999873

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.87  E-value=0.0041  Score=56.37  Aligned_cols=84  Identities=15%  Similarity=0.076  Sum_probs=55.7

Q ss_pred             cCC-CCCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEeCCHHH---------------H-HHHHHHhCCCe-e--EecC
Q 019042          153 CSP-KKGEYVYVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKEK---------------V-NLLKNKFGFDD-A--FNYK  211 (347)
Q Consensus       153 ~~~-~~~~~vlI~ga~g~vG~~a~qla~~-~G~~V~~~~~~~~~---------------~-~~~~~~~g~~~-v--i~~~  211 (347)
                      ..+ +.++++||+||++|+|++.+..+.. .|++|+++.++.+.               . +.++ +.|... .  .|..
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCC
Confidence            345 3578999999999999999988888 99999998865432               1 3344 556532 2  2333


Q ss_pred             ChhhHH---HHHHHHCCCCccEEEECCCc
Q 019042          212 KEPDLD---AALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       212 ~~~~~~---~~i~~~~~~~~d~vid~~g~  237 (347)
                      +.++..   +.+.+..+|++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            432332   33334442579999999874

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.85  E-value=0.0043  Score=51.24  Aligned_cols=103  Identities=14%  Similarity=0.064  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC---
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF---  224 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~---  224 (347)
                      ....++.+||-+|  .|.|..++.+++..  +.+|++++.+++..+.+++.   .|....+..... |..+.+..+.   
T Consensus        54 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  130 (223)
T 3duw_A           54 VQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG-LALDSLQQIENEK  130 (223)
T ss_dssp             HHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHTT
T ss_pred             HHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcC
Confidence            3456788999998  45788899999887  67999999999887777643   354321222222 3333333322   


Q ss_pred             CCCccEEEECCCc----hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+|+|+-....    ..+..+.+.|+++|.++.-..
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  168 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV  168 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            1359999854432    267888899999998876543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.85  E-value=0.0068  Score=51.90  Aligned_cols=94  Identities=11%  Similarity=0.018  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++.+++|+|+ |++|.++++.+...|++|+++.++.++.+.+.++++....++..+.++    +.+   +++|++++|++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~---~~~DivVn~t~  189 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----LEG---HEFDLIINATS  189 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----GTT---CCCSEEEECCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHH----hcc---CCCCEEEECCC
Confidence            5789999997 899999999999999999999999888766554665411122111101    111   45999999998


Q ss_pred             chhHHH----HHHhhccCCEEEEEcc
Q 019042          237 GKMLDA----VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~~~~~~----~~~~l~~~G~~v~~g~  258 (347)
                      ......    ....++++..++.+..
T Consensus       190 ~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          190 SGISGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             CGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            643210    1123555666666554

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.85  E-value=0.0039  Score=52.69  Aligned_cols=102  Identities=15%  Similarity=0.118  Sum_probs=71.7

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh----CCCeeEecCChhhHHHHHHHHC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF----GFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      ....+.++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |...+ ..... |+.+.  .+.
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~~--~~~  163 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLG-KLEEA--ELE  163 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEES-CGGGC--CCC
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEEC-chhhc--CCC
Confidence            4467889999999994 4 589999999985  569999999999888887433    53221 11111 22111  011


Q ss_pred             CCCccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+|+|+.....  ..+..+.+.|+++|+++.+..
T Consensus       164 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  199 (258)
T 2pwy_A          164 EAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP  199 (258)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            2369999976654  478899999999999987754

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.84  E-value=0.003  Score=53.59  Aligned_cols=101  Identities=9%  Similarity=-0.004  Sum_probs=70.9

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC----eeEecCChhhHHHHHHHHC
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD----DAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~  224 (347)
                      +.....+.++.+||-.|+  |.|..+..+++..|++|++++.+++..+.++ +....    ..+..+-. ++     ...
T Consensus        47 ~~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~d~~-~~-----~~~  117 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMAN-ERVSGNNKIIFEANDIL-TK-----EFP  117 (266)
T ss_dssp             HTTTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HTCCSCTTEEEEECCTT-TC-----CCC
T ss_pred             HHHhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHhhcCCCeEEEECccc-cC-----CCC
Confidence            335567889999999994  4888999999887999999999999988888 44321    11211111 11     111


Q ss_pred             CCCccEEEECCCc---------hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG---------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+|+|+.+..-         ..+..+.+.|+++|+++....
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            2379999976432         256888899999999998764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.83  E-value=0.00034  Score=59.99  Aligned_cols=75  Identities=17%  Similarity=0.211  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCC--CCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP--EGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--~~~d~vid~  234 (347)
                      .|++++|+||+|++|.+.++.+...|++|++++++.++.+... .+    ..|..+.++..+.+.+...  +++|++|.+
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HL----PGDLREAAYADGLPGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-EC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-cc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            4789999999999999999999999999999998765322111 11    1233333122222222211  369999999


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      +|
T Consensus       102 Ag  103 (266)
T 3uxy_A          102 AG  103 (266)
T ss_dssp             CC
T ss_pred             CC
Confidence            88

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.82  E-value=0.011  Score=47.25  Aligned_cols=102  Identities=22%  Similarity=0.255  Sum_probs=69.0

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ....+.++++||-.|+ | .|..+..+++.. .+|++++.+++..+.+++.   .+...-+..... ++.+.+...  +.
T Consensus        27 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~--~~  100 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-G-TGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKI--PD  100 (192)
T ss_dssp             HHHCCCTTCEEEEESC-T-TSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTS--CC
T ss_pred             HhcCCCCCCEEEEECC-C-CCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-CHHHhcccC--CC
Confidence            4457889999999994 4 388888888766 8999999999888777742   343111222222 443322211  36


Q ss_pred             ccEEEECCC----chhHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVG----GKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g----~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+|+....    ...+..+.+.|+++|+++....
T Consensus       101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~  135 (192)
T 1l3i_A          101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (192)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence            999997654    1367888889999999987643

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.81  E-value=0.0016  Score=53.18  Aligned_cols=146  Identities=19%  Similarity=0.253  Sum_probs=85.1

Q ss_pred             CCCCCEEEeccCcceeEe-ecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHH
Q 019042           97 YKKDDLVWGLTSWEEYSL-IQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVG  175 (347)
Q Consensus        97 ~~vGd~V~~~g~~~~~~~-~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~  175 (347)
                      +++|+.+.....|.+|.. .+... .+.+ +.++...  ....+ ........+.  ..+.++++||-.|+ | .|..+.
T Consensus         6 ~~~~~~~~~~p~w~~~~~~~~~~~-~~~~-~~~~~f~--~~~~~-~~~~~~~~l~--~~~~~~~~vLDiG~-G-~G~~~~   76 (205)
T 3grz_A            6 INLSRHLAIVPEWEDYQPVFKDQE-IIRL-DPGLAFG--TGNHQ-TTQLAMLGIE--RAMVKPLTVADVGT-G-SGILAI   76 (205)
T ss_dssp             EEEETTEEEEETTCCCCCSSTTCE-EEEE-SCC-------CCHH-HHHHHHHHHH--HHCSSCCEEEEETC-T-TSHHHH
T ss_pred             EEECCcEEEeccccccccCCCCce-eEEe-cCCcccC--CCCCc-cHHHHHHHHH--HhccCCCEEEEECC-C-CCHHHH
Confidence            456776776777888876 56555 7777 5552222  11110 0011111221  12568899999984 4 477777


Q ss_pred             HHHHHCCC-EEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch----hHHHHHHhh
Q 019042          176 QFAKLVGC-YVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK----MLDAVLLNM  247 (347)
Q Consensus       176 qla~~~G~-~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~----~~~~~~~~l  247 (347)
                      .+++ .+. +|++++.++...+.+++.   .+... +..... |+.+    ...+.+|+|+......    .+..+.+.|
T Consensus        77 ~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~----~~~~~fD~i~~~~~~~~~~~~l~~~~~~L  149 (205)
T 3grz_A           77 AAHK-LGAKSVLATDISDESMTAAEENAALNGIYD-IALQKT-SLLA----DVDGKFDLIVANILAEILLDLIPQLDSHL  149 (205)
T ss_dssp             HHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEES-STTT----TCCSCEEEEEEESCHHHHHHHGGGSGGGE
T ss_pred             HHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEec-cccc----cCCCCceEEEECCcHHHHHHHHHHHHHhc
Confidence            7776 455 999999999887777743   24321 111111 2211    1234799999765543    355566789


Q ss_pred             ccCCEEEEEcc
Q 019042          248 RIHGRIAVCGM  258 (347)
Q Consensus       248 ~~~G~~v~~g~  258 (347)
                      +++|+++....
T Consensus       150 ~~gG~l~~~~~  160 (205)
T 3grz_A          150 NEDGQVIFSGI  160 (205)
T ss_dssp             EEEEEEEEEEE
T ss_pred             CCCCEEEEEec
Confidence            99999987644

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.81  E-value=0.002  Score=55.51  Aligned_cols=95  Identities=22%  Similarity=0.261  Sum_probs=62.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|+|+||+|.+|...++.+...  |.+|++++++.++.+.+. ..+... ..|..+.    +.+.+... ++|+||.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQP----ESLQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCH----HHHHHHHh-cCCEEEEcCC
Confidence            5899999999999999888887  899999999877655554 434432 2344443    23333332 4899999987


Q ss_pred             ch--------hHHHHHHhhccC--CEEEEEcccc
Q 019042          237 GK--------MLDAVLLNMRIH--GRIAVCGMIS  260 (347)
Q Consensus       237 ~~--------~~~~~~~~l~~~--G~~v~~g~~~  260 (347)
                      ..        .....++.++..  +++|.+++..
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            41        223344444443  4888877643

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.80  E-value=0.0084  Score=52.33  Aligned_cols=87  Identities=17%  Similarity=0.171  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|...++.++..|++|++.+++.++ +.+. ++|+..    .   ++.+.+.+     .|+|+-+..
T Consensus       141 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~~-----aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKF----V---DLETLLKE-----SDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCccc----c---CHHHHHhh-----CCEEEEecC
Confidence            578999999 5999999999999999999999988766 4555 677632    1   33333433     899999876


Q ss_pred             c-h----hH-HHHHHhhccCCEEEEEcc
Q 019042          237 G-K----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      . +    .+ ...+..+++++.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            4 2    22 457788999999998876

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.80  E-value=0.0024  Score=53.43  Aligned_cols=101  Identities=18%  Similarity=0.230  Sum_probs=69.9

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCC-
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPE-  226 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~-  226 (347)
                      ....+.++++||..|+ | .|..+..+++..+.+|++++.+++..+.+++.   .|... +..... |...   .+..+ 
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~---~~~~~~  157 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKN-VHVILG-DGSK---GFPPKA  157 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES-CGGG---CCGGGC
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEEC-Cccc---CCCCCC
Confidence            4457889999999994 4 79999999998778999999999887777643   34332 221111 2211   11112 


Q ss_pred             CccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+|+|+.+..- .....+.+.|+++|+++..-.
T Consensus       158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            49999987765 355788899999999886543

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.79  E-value=0.0045  Score=51.16  Aligned_cols=102  Identities=14%  Similarity=0.117  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCC--
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ....++.+||-+|+  |.|..++.+++..  +.+|++++.+++..+.+++.+   |....+..... +..+.+.....  
T Consensus        60 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  136 (225)
T 3tr6_A           60 VKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIHAG  136 (225)
T ss_dssp             HHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHTTT
T ss_pred             HHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhhcc
Confidence            34457789999984  5688899999876  569999999998887776433   44321222222 33344433321  


Q ss_pred             --CCccEEEECCCc----hhHHHHHHhhccCCEEEEEc
Q 019042          226 --EGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       226 --~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                        +.+|+|+-....    ..+..+.+.|+++|.++.-.
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence              469999854442    25788889999999998654

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.78  E-value=0.0072  Score=51.20  Aligned_cols=96  Identities=18%  Similarity=0.168  Sum_probs=65.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +.++++||-.|+ | .|..++.+++ .|++|++++.++...+.+++.   .+..  +..... ++.+.   +..+.+|+|
T Consensus       118 ~~~~~~VLDiGc-G-~G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~---~~~~~fD~V  188 (254)
T 2nxc_A          118 LRPGDKVLDLGT-G-SGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAA---LPFGPFDLL  188 (254)
T ss_dssp             CCTTCEEEEETC-T-TSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHH---GGGCCEEEE
T ss_pred             cCCCCEEEEecC-C-CcHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-Chhhc---CcCCCCCEE
Confidence            578899999994 4 3777777666 577999999998877777632   2332  222222 33332   223479999


Q ss_pred             EECCCc----hhHHHHHHhhccCCEEEEEccc
Q 019042          232 FENVGG----KMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       232 id~~g~----~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.+.-.    ..+..+.++|+++|+++..+..
T Consensus       189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          189 VANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence            976532    3567788899999999987653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.76  E-value=0.0032  Score=55.59  Aligned_cols=100  Identities=19%  Similarity=0.102  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC-ee---EecCChhhHHHHHHHHCCCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD-DA---FNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~v---i~~~~~~~~~~~i~~~~~~~  227 (347)
                      -++.+|||+||+|.+|..++..+...|.+|++++++.++.+.+.+.+    +.. ..   .|..+. +   .+.+... +
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~---~~~~~~~-~   83 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ-G---AYDEVIK-G   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST-T---TTTTTTT-T
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh-H---HHHHHHc-C
Confidence            45789999999999999999999889999999999887765554222    221 11   233332 1   1222221 5


Q ss_pred             ccEEEECCCch---------------hHHHHHHhhc--c-CCEEEEEcccc
Q 019042          228 IDIYFENVGGK---------------MLDAVLLNMR--I-HGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~---------------~~~~~~~~l~--~-~G~~v~~g~~~  260 (347)
                      +|+||.+++..               .....++.+.  . .+++|.+++..
T Consensus        84 ~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~  134 (342)
T 1y1p_A           84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV  134 (342)
T ss_dssp             CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred             CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence            89999998731               0122333333  2 37899887753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.76  E-value=0.0044  Score=57.26  Aligned_cols=81  Identities=17%  Similarity=0.244  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHhCCCe-eEecCChhhHHHHHH---HHCCCCccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE--KVNLLKNKFGFDD-AFNYKKEPDLDAALK---RCFPEGIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~-vi~~~~~~~~~~~i~---~~~~~~~d~  230 (347)
                      ++.+++|+|++|++|...++.+...|++|+++.++..  +.+...++.+... ..|..+.++..+.+.   +..++.+|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5789999999999999999998889999999987543  3333322555532 234444323443333   333334999


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      +|.+.|.
T Consensus       292 lV~nAGv  298 (454)
T 3u0b_A          292 LVNNAGI  298 (454)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999883

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.75  E-value=0.0079  Score=52.37  Aligned_cols=91  Identities=16%  Similarity=0.199  Sum_probs=58.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--HhCCCe-eEecCChhhHHHHHHHHCCCCccE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-----KEKVNLLKN--KFGFDD-AFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-----~~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      .+|+|+||+|.+|...++.+...|.+|++++++     +++.+.+++  ..+... ..|..+.+++.+.+    . ++|+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~----~-~~d~   79 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL----K-QVDV   79 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH----T-TCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHH----h-CCCE
Confidence            579999999999999999998899999999987     445444430  223321 23444432333333    2 4999


Q ss_pred             EEECCCch-------hHHHHHHhhccCC---EEE
Q 019042          231 YFENVGGK-------MLDAVLLNMRIHG---RIA  254 (347)
Q Consensus       231 vid~~g~~-------~~~~~~~~l~~~G---~~v  254 (347)
                      ||.+++..       .....++.++..|   ++|
T Consensus        80 vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           80 VISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             EEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             EEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            99998742       2344455554444   776

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.75  E-value=0.0052  Score=48.57  Aligned_cols=102  Identities=17%  Similarity=0.255  Sum_probs=70.4

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---hCCC-eeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNK---FGFD-DAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++.   .+.. .+ ....  +..+.+... .
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~--d~~~~~~~~-~   92 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ--GAPRAFDDV-P   92 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC--CTTGGGGGC-C
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec--chHhhhhcc-C
Confidence            3457788999999994 4 599999999887 56999999999888877743   2443 33 2221  221122211 1


Q ss_pred             CCccEEEECCCc---hhHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFENVGG---KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+|+|+.....   ..+..+.+.|+++|+++....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            469999976644   368999999999999987654

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.73  E-value=0.0048  Score=53.59  Aligned_cols=93  Identities=14%  Similarity=0.025  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ++.+++|+|+ |++|.+++..+...|+ +|++..++.++.+.+.++++..  .+++.  . +    +.+.. +.+|+||+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~-~----~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL--A-E----AETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--H-H----HHHTG-GGCSEEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--H-H----HHhhh-ccCCEEEE
Confidence            5789999996 9999999999999998 9999999998876665466652  22221  1 2    22211 24899999


Q ss_pred             CCCchhH------HHHHHhhccCCEEEEEcc
Q 019042          234 NVGGKML------DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       234 ~~g~~~~------~~~~~~l~~~G~~v~~g~  258 (347)
                      |++....      ......++++..++.+..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            9985321      011235667777777755

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.72  E-value=0.0073  Score=54.98  Aligned_cols=84  Identities=14%  Similarity=0.072  Sum_probs=53.0

Q ss_pred             cCCCCCCEEEEEcCCChHHHH--HHHHHHHCCCEEEEEeCCH---------------HHHH-HHHHHhCCCe---eEecC
Q 019042          153 CSPKKGEYVYVSAASGAVGQL--VGQFAKLVGCYVVGSAGSK---------------EKVN-LLKNKFGFDD---AFNYK  211 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~--a~qla~~~G~~V~~~~~~~---------------~~~~-~~~~~~g~~~---vi~~~  211 (347)
                      ..+..|++++|+||++|+|.+  .+..+...|++|+++.++.               +..+ .++ +.|...   ..|..
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeCC
Confidence            345678999999999999998  5555555699999988742               2222 233 556432   23444


Q ss_pred             ChhhHHHHHHHHCC--CCccEEEECCCc
Q 019042          212 KEPDLDAALKRCFP--EGIDIYFENVGG  237 (347)
Q Consensus       212 ~~~~~~~~i~~~~~--~~~d~vid~~g~  237 (347)
                      +.++..+.+.+...  +++|+++.++|.
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            43233333333322  479999998875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.71  E-value=0.0044  Score=53.87  Aligned_cols=92  Identities=15%  Similarity=0.155  Sum_probs=58.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-------HHHHHHHH--HhCCCe-eEecCChhhHHHHHHHHCCCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-------EKVNLLKN--KFGFDD-AFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-------~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      +.+|+|+||+|.+|...++.+...|.+|++++++.       ++.+.+++  ..++.. ..|..+.+.+.+.++     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK-----Q   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----T
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh-----C
Confidence            35799999999999999998888899999999876       55444330  234432 234444322333322     4


Q ss_pred             ccEEEECCCch---hHHHHHHhhccC---CEEE
Q 019042          228 IDIYFENVGGK---MLDAVLLNMRIH---GRIA  254 (347)
Q Consensus       228 ~d~vid~~g~~---~~~~~~~~l~~~---G~~v  254 (347)
                      +|+||.+++..   .....++.++..   .+++
T Consensus        77 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           77 VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            99999999852   233444444433   4676

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.69  E-value=0.003  Score=56.77  Aligned_cols=81  Identities=12%  Similarity=0.027  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEeCCHHH----------------HHHHHHHhCCCe---eEecCChhh
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKEK----------------VNLLKNKFGFDD---AFNYKKEPD  215 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~-~G~~V~~~~~~~~~----------------~~~~~~~~g~~~---vi~~~~~~~  215 (347)
                      ..++++||+||++|+|.+.+..+.. .|++|+++.++.+.                .+.++ +.|...   ..|..+.++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCCCHHH
Confidence            4578899999999999999888888 99999988764321                12334 556432   124344323


Q ss_pred             HHHHHHHHC--CCCccEEEECCCc
Q 019042          216 LDAALKRCF--PEGIDIYFENVGG  237 (347)
Q Consensus       216 ~~~~i~~~~--~~~~d~vid~~g~  237 (347)
                      ..+.+.+..  -|++|++++++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCcc
Confidence            333333322  1479999999874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.68  E-value=0.024  Score=48.45  Aligned_cols=91  Identities=13%  Similarity=0.025  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC--CeeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGF--DDAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+.++++.  ..+..+.   ++.       ...+|+||+
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~-------~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALE-------GQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGT-------TCCCSEEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhc-------ccCCCEEEE
Confidence            5889999996 9999999999999997 999999999887766656664  1223222   221       135999999


Q ss_pred             CCCchhHH----HHHHhhccCCEEEEEcc
Q 019042          234 NVGGKMLD----AVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       234 ~~g~~~~~----~~~~~l~~~G~~v~~g~  258 (347)
                      |++.....    .....++++..++.+..
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~DlvY  216 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYELAY  216 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEeec
Confidence            98643110    01245677777776654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.67  E-value=0.0076  Score=52.55  Aligned_cols=69  Identities=14%  Similarity=0.153  Sum_probs=40.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +.+|||+||+|.+|...++.+...|.+|++++++..+    . .   ....|..+.+++.+.+...   ++|+||.+++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~---~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K---FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C---eEEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence            4689999999999999999999899999999976543    1 1   1112222221333334322   48999998874

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.66  E-value=0.0079  Score=53.92  Aligned_cols=92  Identities=13%  Similarity=0.114  Sum_probs=65.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      -+|+|+|+ |.+|..+++.+.. ..+|.+.+++.++.+.++ +......+|..+.+.+.+.++     ++|+|+.|.+..
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~~~l~~~~~-----~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNFDKLVEVMK-----EFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCHHHHHHHHT-----TCSEEEECCCGG
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCHHHHHHHHh-----CCCEEEEecCCc
Confidence            37999997 9999998887754 468999999998888776 443333355554423333332     489999999874


Q ss_pred             -hHHHHHHhhccCCEEEEEcc
Q 019042          239 -MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       239 -~~~~~~~~l~~~G~~v~~g~  258 (347)
                       ....+-.|++.+-+++.+..
T Consensus        89 ~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           89 LGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             GHHHHHHHHHHHTCEEEECCC
T ss_pred             ccchHHHHHHhcCcceEeeec
Confidence             55666678888889998764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.65  E-value=0.0054  Score=54.94  Aligned_cols=75  Identities=12%  Similarity=0.078  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCe-eEecC-ChhhHHHHHHHHCCCCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDD-AFNYK-KEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~-~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +.+|||+||+|.+|...++.+... |.+|++++++.++...+.+..+... ..|.. +.+.+.+.+.     ++|+||.+
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~   98 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL   98 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence            468999999999999999988877 8999999998765443331122221 23444 3313333333     48999998


Q ss_pred             CCc
Q 019042          235 VGG  237 (347)
Q Consensus       235 ~g~  237 (347)
                      ++.
T Consensus        99 A~~  101 (372)
T 3slg_A           99 VAI  101 (372)
T ss_dssp             BCC
T ss_pred             Ccc
Confidence            873

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.65  E-value=0.02  Score=49.94  Aligned_cols=96  Identities=16%  Similarity=0.147  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC---HHHHHHHHHHhC----CC-eeEecCChhhHHHHHHHHCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGS---KEKVNLLKNKFG----FD-DAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~---~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      .+++++|+|+ |+.|.+++..+...|+ +|+++.|+   .++.+.+.++++    .. ..++..+.+.+.+.+.+     
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~-----  220 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS-----  220 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH-----
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC-----
Confidence            5789999996 9999999999999999 89999999   666655543443    21 23333331011233332     


Q ss_pred             ccEEEECCCchh---HHH----HHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGGKM---LDA----VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~~~---~~~----~~~~l~~~G~~v~~g~  258 (347)
                      +|+||+|++...   -..    ....++++..+..+-.
T Consensus       221 ~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  258 (312)
T 3t4e_A          221 ADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVY  258 (312)
T ss_dssp             CSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCC
T ss_pred             ceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEecc
Confidence            899999986421   011    1234566666666544

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.64  E-value=0.0089  Score=52.30  Aligned_cols=91  Identities=12%  Similarity=0.119  Sum_probs=58.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHH--HhCCCe-eEecCChhhHHHHHHHHCCCCcc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK------EKVNLLKN--KFGFDD-AFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~------~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      .+|+|+||+|.+|...++.+...|.+|++++++.      ++.+.+.+  ..+... ..|..+.+++.+.+    . ++|
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~----~-~~d   79 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVL----K-QVD   79 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH----T-TCS
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHH----c-CCC
Confidence            4699999999999999999988999999999875      34333320  234432 23444432233332    2 499


Q ss_pred             EEEECCCch---hHHHHHHhhccC---CEEE
Q 019042          230 IYFENVGGK---MLDAVLLNMRIH---GRIA  254 (347)
Q Consensus       230 ~vid~~g~~---~~~~~~~~l~~~---G~~v  254 (347)
                      +||.+++..   ....+++.++..   +++|
T Consensus        80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           80 IVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            999998852   334445544443   4776

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.63  E-value=0.013  Score=54.65  Aligned_cols=78  Identities=19%  Similarity=0.203  Sum_probs=53.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHH-------HHHHHHHHhCCCe---eEecCChhhHHHHHHHHCCC-
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKE-------KVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFPE-  226 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~-------~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~~-  226 (347)
                      .++||+|++|++|...++.+...|+ +|+.+.++..       -.+.++ ..|...   ..|..+.+++.+.+.++... 
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            8999999999999999998888999 8888887631       123333 556532   23444443455555554333 


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|++|.+.|.
T Consensus       319 ~ld~vVh~AGv  329 (496)
T 3mje_A          319 PLTAVFHSAGV  329 (496)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCeEEEECCcc
Confidence            79999999873

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.63  E-value=0.011  Score=50.75  Aligned_cols=102  Identities=19%  Similarity=0.168  Sum_probs=71.0

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh----C--CCeeEecCChhhHHHHHHH
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF----G--FDDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~----g--~~~vi~~~~~~~~~~~i~~  222 (347)
                      ....+.++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |  ... +..... |+.+.  .
T Consensus        93 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~-v~~~~~-d~~~~--~  166 (280)
T 1i9g_A           93 HEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDN-WRLVVS-DLADS--E  166 (280)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTT-EEEECS-CGGGC--C
T ss_pred             HHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCc-EEEEEC-chHhc--C
Confidence            4467899999999984 4 788999999875  569999999999887777433    4  222 111111 22111  0


Q ss_pred             HCCCCccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          223 CFPEGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       223 ~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ...+.+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       167 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          167 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            112369999876654  478899999999999987654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.63  E-value=0.0013  Score=58.17  Aligned_cols=78  Identities=13%  Similarity=0.117  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH---HH-HHHHHHhC------CC-e--eEecCChhhHHHHHHHHC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE---KV-NLLKNKFG------FD-D--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~---~~-~~~~~~~g------~~-~--vi~~~~~~~~~~~i~~~~  224 (347)
                      +++++|+|++|++|..++..+...|++|+.+.++..   +. +.++ ..+      .. .  ..|..+.+++.+.+.+..
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            568999999999999999999999998777654322   11 2222 221      21 1  234455434555555543


Q ss_pred             CCCccEEEECCC
Q 019042          225 PEGIDIYFENVG  236 (347)
Q Consensus       225 ~~~~d~vid~~g  236 (347)
                      .+.+|++|.+.|
T Consensus        81 ~g~iD~lVnnAG   92 (327)
T 1jtv_A           81 EGRVDVLVCNAG   92 (327)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            347999999987

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.62  E-value=0.014  Score=54.01  Aligned_cols=95  Identities=16%  Similarity=0.144  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ++.+|+|+|+ |++|..++..+... |.+|++.+++.++.+.+.+..+... .+|..+.+++.+.+.     ++|+||+|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~   95 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISL   95 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEEC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEEC
Confidence            3568999997 99999999888887 6799999999888766652334321 234433323333332     48999999


Q ss_pred             CCch-hHHHHHHhhccCCEEEEEc
Q 019042          235 VGGK-MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       235 ~g~~-~~~~~~~~l~~~G~~v~~g  257 (347)
                      ++.. .......+++.+-.++...
T Consensus        96 tp~~~~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEEECS
T ss_pred             CchhhhHHHHHHHHhcCCEEEEee
Confidence            9864 2233445677777776653

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.61  E-value=0.007  Score=54.03  Aligned_cols=37  Identities=14%  Similarity=0.131  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH--CCCEEEEEeCCHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKL--VGCYVVGSAGSKE  193 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~--~G~~V~~~~~~~~  193 (347)
                      .+.+|||+||+|.+|...++.+..  .|++|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            467999999999999999998888  8999999997543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.60  E-value=0.0019  Score=54.01  Aligned_cols=72  Identities=17%  Similarity=0.112  Sum_probs=49.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCC--CCccEEEECC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP--EGIDIYFENV  235 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--~~~d~vid~~  235 (347)
                      +++++|+||+|++|...++.+...|++|++++++.+    .. ++- ....|..+.+++.+.+.+. .  +++|+++.++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~a   74 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARA-QEEAPLFAVVSAA   74 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHH-HHHSCEEEEEECC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcc
Confidence            578999999999999999998888999999998764    11 110 1123444442444444433 1  2689999988


Q ss_pred             C
Q 019042          236 G  236 (347)
Q Consensus       236 g  236 (347)
                      |
T Consensus        75 g   75 (242)
T 1uay_A           75 G   75 (242)
T ss_dssp             C
T ss_pred             c
Confidence            7

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.60  E-value=0.044  Score=42.16  Aligned_cols=95  Identities=9%  Similarity=0.036  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHh--CCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKNKF--GFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~~~--g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ..+++|.|+ |.+|...++.+...|.+|++++++ +++.+.+++.+  |. .++..+.. + .+.+.+..-.++|.|+-+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~~-~-~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDSN-D-SSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCTT-S-HHHHHHHTTTTCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEEcCCC-C-HHHHHHcChhhCCEEEEe
Confidence            457999995 999999999999999999999987 56555555333  33 23322221 1 223443322369999999


Q ss_pred             CCchhHH----HHHHhhccCCEEEEE
Q 019042          235 VGGKMLD----AVLLNMRIHGRIAVC  256 (347)
Q Consensus       235 ~g~~~~~----~~~~~l~~~G~~v~~  256 (347)
                      ++....+    ...+.+.+..+++..
T Consensus        79 ~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9875222    223334344566554

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.59  E-value=0.0083  Score=55.57  Aligned_cols=90  Identities=18%  Similarity=0.190  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -.|.+|.|+| .|.+|..+++.++..|++|++.+++..+...+. ..|.. +.      ++.+.+.     ..|+|+-+.
T Consensus       275 L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~-~~------~l~ell~-----~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYR-VV------TMEYAAD-----KADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEECS
T ss_pred             cCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCE-eC------CHHHHHh-----cCCEEEECC
Confidence            4689999999 599999999999999999999999987643343 44543 11      3333332     389999998


Q ss_pred             Cch-hH-HHHHHhhccCCEEEEEccc
Q 019042          236 GGK-ML-DAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       236 g~~-~~-~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.. .+ ...+..|+++..++.++..
T Consensus       341 ~t~~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             SSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred             CcccccCHHHHhhCCCCcEEEEcCCC
Confidence            653 33 5677899999999988763

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.57  E-value=0.029  Score=45.79  Aligned_cols=89  Identities=11%  Similarity=0.047  Sum_probs=59.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG-----FDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +|+|+|++|.+|...+..+...|.+|++.++++++.+.+.+.++     .+  +..  . ++.+.+..     +|+||.|
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~~-----~D~Vi~~   71 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS--ITG--M-KNEDAAEA-----CDIAVLT   71 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC--EEE--E-EHHHHHHH-----CSEEEEC
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC--CCh--h-hHHHHHhc-----CCEEEEe
Confidence            58899977999999988888889999999999887776653444     11  111  1 44444443     8999999


Q ss_pred             CCchhHHHHHHhhc---cCCEEEEEcc
Q 019042          235 VGGKMLDAVLLNMR---IHGRIAVCGM  258 (347)
Q Consensus       235 ~g~~~~~~~~~~l~---~~G~~v~~g~  258 (347)
                      +........+..+.   ++..++.+..
T Consensus        72 ~~~~~~~~~~~~l~~~~~~~~vi~~~~   98 (212)
T 1jay_A           72 IPWEHAIDTARDLKNILREKIVVSPLV   98 (212)
T ss_dssp             SCHHHHHHHHHHTHHHHTTSEEEECCC
T ss_pred             CChhhHHHHHHHHHHHcCCCEEEEcCC
Confidence            98754444443222   3455555543

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.57  E-value=0.005  Score=49.75  Aligned_cols=102  Identities=19%  Similarity=0.177  Sum_probs=67.9

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ..++++++||-.|+  |.|..+..+++..+  .+|++++.+++..+.+++.   .|...-+..... |+. .+....++.
T Consensus        18 ~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~-~~~~~~~~~   93 (197)
T 3eey_A           18 MFVKEGDTVVDATC--GNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD-GHQ-NMDKYIDCP   93 (197)
T ss_dssp             HHCCTTCEEEESCC--TTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS-CGG-GGGGTCCSC
T ss_pred             hcCCCCCEEEEcCC--CCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHH-HHhhhccCC
Confidence            46788999999984  44888889998864  5999999999887777643   233111222111 221 111122347


Q ss_pred             ccEEEECCCc----------------hhHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGG----------------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+|+.+.+-                ..+..+.+.|+++|+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            9999865532                368888999999999987754

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.56  E-value=0.017  Score=51.21  Aligned_cols=96  Identities=16%  Similarity=0.168  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh----hh----------H-HHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE----PD----------L-DAAL  220 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~----~~----------~-~~~i  220 (347)
                      -+|++|.|+| .|.+|+.+++.++..|++|++.+.+.++.++.+ ++|+..+ +..+.    .|          + .+.+
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~-~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~  249 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVA  249 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHH-hcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHH
Confidence            4789999999 599999999999999999998888877655555 7776432 11000    00          0 0111


Q ss_pred             HHHCCCCccEEEECCCchhH-HHHHHhhccCCEEEEEc
Q 019042          221 KRCFPEGIDIYFENVGGKML-DAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       221 ~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  257 (347)
                      ..+   +.++|++++..... ..+.+.|..+|.++.-+
T Consensus       250 ~~l---k~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd  284 (355)
T 1c1d_A          250 RTL---DCSVVAGAANNVIADEAASDILHARGILYAPD  284 (355)
T ss_dssp             HHC---CCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred             hhC---CCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence            111   36777777766543 36677777777766544

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.56  E-value=0.02  Score=52.08  Aligned_cols=94  Identities=14%  Similarity=0.067  Sum_probs=65.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhC------CC-eeEecCChhhHHHHHHHHCCCCcc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVG---CYVVGSAGSKEKVNLLKNKFG------FD-DAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G---~~V~~~~~~~~~~~~~~~~~g------~~-~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      +|+|+|+ |++|..+++.+...|   .+|++.+++.++.+.+.++++      .. ..+|..+.+++.+.+.+.   ++|
T Consensus         3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~D   78 (405)
T 4ina_A            3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KPQ   78 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CCC
Confidence            7999997 999999999888887   499999999988776654553      21 123444432455555443   489


Q ss_pred             EEEECCCch-hHHHHHHhhccCCEEEEEc
Q 019042          230 IYFENVGGK-MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       230 ~vid~~g~~-~~~~~~~~l~~~G~~v~~g  257 (347)
                      +||+|++.. ....+..+++.+-.++.+.
T Consensus        79 vVin~ag~~~~~~v~~a~l~~g~~vvD~a  107 (405)
T 4ina_A           79 IVLNIALPYQDLTIMEACLRTGVPYLDTA  107 (405)
T ss_dssp             EEEECSCGGGHHHHHHHHHHHTCCEEESS
T ss_pred             EEEECCCcccChHHHHHHHHhCCCEEEec
Confidence            999999863 4445556777777777653

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.56  E-value=0.045  Score=41.08  Aligned_cols=77  Identities=18%  Similarity=0.200  Sum_probs=53.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +.+|+|+|+ |.+|...++.+...|.+|+++++++++.+.+++.++.. ++..+.. +. +.+.+..-.++|+|+-|++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~~d~~-~~-~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCT-KI-KTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTT-SH-HHHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcE-EEEcCCC-CH-HHHHHcCcccCCEEEEeeCC
Confidence            357999996 99999999999999999999999998877776345653 2322211 11 22332212369999999987


Q ss_pred             h
Q 019042          238 K  238 (347)
Q Consensus       238 ~  238 (347)
                      .
T Consensus        80 ~   80 (140)
T 1lss_A           80 E   80 (140)
T ss_dssp             H
T ss_pred             c
Confidence            4

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.56  E-value=0.0078  Score=55.53  Aligned_cols=91  Identities=20%  Similarity=0.192  Sum_probs=68.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      .-.|.+|.|.| .|.+|..+++.++..|++|++..++..+...+. ..|.. +   .   ++.+.+.     ..|+|+-+
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~---~---~l~ell~-----~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-V---V---TLDEIVD-----KGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-E---C---CHHHHTT-----TCSEEEEC
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-e---c---CHHHHHh-----cCCEEEEC
Confidence            34689999999 599999999999999999999999987653444 45552 1   1   3333332     38999999


Q ss_pred             CCch-hH-HHHHHhhccCCEEEEEccc
Q 019042          235 VGGK-ML-DAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       235 ~g~~-~~-~~~~~~l~~~G~~v~~g~~  259 (347)
                      .+.. .+ ...+..|+++..++.++..
T Consensus       320 ~~t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             CChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence            7653 33 4677889999999998863

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.56  E-value=0.015  Score=49.99  Aligned_cols=101  Identities=12%  Similarity=0.036  Sum_probs=69.1

Q ss_pred             hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCC
Q 019042          150 YELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       150 ~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ....++.++++||-+|+  |.|..+..+++..|++|++++.+++..+.+++.+   |...-+..... |+.    ++. +
T Consensus        57 ~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~----~~~-~  128 (287)
T 1kpg_A           57 LGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GWE----QFD-E  128 (287)
T ss_dssp             HTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CGG----GCC-C
T ss_pred             HHHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Chh----hCC-C
Confidence            34457788999999984  4588899999888999999999999888887432   32111111111 221    111 4


Q ss_pred             CccEEEEC-----CC--c--hhHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFEN-----VG--G--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~-----~g--~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+|+|+..     .+  .  ..+..+.+.|+|+|+++....
T Consensus       129 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          129 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            69999865     22  1  367888899999999987654

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.55  E-value=0.0026  Score=53.28  Aligned_cols=100  Identities=8%  Similarity=-0.032  Sum_probs=66.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEE-
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIY-  231 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v-  231 (347)
                      ..+|.+||-+|.  |.|..+..+++..+.+|++++.+++-.+.++ +....  .-+..... +.......+..+.||.| 
T Consensus        58 ~~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~-~a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEECC--CccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEee-hHHhhcccccccCCceEE
Confidence            367899999994  5788888888877789999999999888888 43321  11111111 33333333333478887 


Q ss_pred             EECCCc-----------hhHHHHHHhhccCCEEEEEcc
Q 019042          232 FENVGG-----------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       232 id~~g~-----------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+...           ..+..+.++|+|||+++.+..
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~  171 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL  171 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEec
Confidence            454432           145678899999999987653

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.55  E-value=0.094  Score=46.34  Aligned_cols=138  Identities=13%  Similarity=0.210  Sum_probs=79.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHH-HC-CCEEEE-EeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          159 EYVYVSAASGAVGQLVGQFAK-LV-GCYVVG-SAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~-~~-G~~V~~-~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -+|.|+|+ |.+|...++.++ .. ++++++ .++++++.+.+.+++|...++  .   ++.+.+.   ..++|+|+.|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~--~---~~~~~l~---~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTY--T---NYKDMID---TENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEE--S---CHHHHHT---TSCCSEEEECS
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCccc--C---CHHHHhc---CCCCCEEEEeC
Confidence            47999995 999998888777 54 777654 566777766555367775443  2   3333332   12699999999


Q ss_pred             Cc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHH-hc-cceeeeeEecccccchHHHHHHHHHHHHcCCcc
Q 019042          236 GG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV-GK-RIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLV  312 (347)
Q Consensus       236 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  312 (347)
                      .. .+...+..+++.+-.+ .+..+...+   ......+.... .+ ++.+.-..    ...+...++.+.+++++|.+-
T Consensus        80 p~~~h~~~~~~al~~G~~v-~~eKp~~~~---~~~~~~l~~~a~~~~~~~~~~~~----~~r~~p~~~~~~~~i~~g~iG  151 (346)
T 3cea_A           80 PTPFHPEMTIYAMNAGLNV-FCEKPLGLD---FNEVDEMAKVIKSHPNQIFQSGF----MRRYDDSYRYAKKIVDNGDIG  151 (346)
T ss_dssp             CGGGHHHHHHHHHHTTCEE-EECSCCCSC---HHHHHHHHHHHHTCTTSCEECCC----GGGTCHHHHHHHHHHHTTTTC
T ss_pred             ChHhHHHHHHHHHHCCCEE-EEcCCCCCC---HHHHHHHHHHHHhCCCCeEEEec----ccccCHHHHHHHHHHHcCCCC
Confidence            87 4777777888876544 454321110   00000111111 23 34332111    122234578888889888774


Q ss_pred             c
Q 019042          313 Y  313 (347)
Q Consensus       313 ~  313 (347)
                      .
T Consensus       152 ~  152 (346)
T 3cea_A          152 K  152 (346)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.55  E-value=0.0079  Score=51.29  Aligned_cols=96  Identities=20%  Similarity=0.125  Sum_probs=64.9

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +||+...+...+.+..---.|.+++|.|+++-+|..+++++...|++|+++.+..                    . ++.
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~  199 (285)
T 3l07_A          141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------------T-DLK  199 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-SHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHH
Confidence            4444444444554433334799999999866689999999999999988775321                    1 333


Q ss_pred             HHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          218 AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.++     .+|+||.++|...+ ---+.++++-.++.+|...
T Consensus       200 ~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          200 SHTT-----KADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HHHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             Hhcc-----cCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence            3443     28999999987532 1224678888999888743

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.54  E-value=0.005  Score=54.37  Aligned_cols=76  Identities=14%  Similarity=0.240  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhCC--C-e--eEecCChhhHHHHHHHHCCCCccE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV--NLLKNKFGF--D-D--AFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~--~~~~~~~g~--~-~--vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      +.+|||+||+|.+|...++.+...|.+|++++++.++.  +.++ .++.  . .  ..|..+.+++.+.+...   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence            56899999999999999999988999999999876532  2333 4421  1 1  12444432343444332   4799


Q ss_pred             EEECCCc
Q 019042          231 YFENVGG  237 (347)
Q Consensus       231 vid~~g~  237 (347)
                      ||.+++.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.54  E-value=0.016  Score=54.40  Aligned_cols=78  Identities=15%  Similarity=0.196  Sum_probs=54.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHH-------HHHHHHHhCCCe-e--EecCChhhHHHHHHHH
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEK-------VNLLKNKFGFDD-A--FNYKKEPDLDAALKRC  223 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~-------~~~~~~~~g~~~-v--i~~~~~~~~~~~i~~~  223 (347)
                      ++++.++||+|++|++|...+..+...|+ +|+.+.++...       .+.++ ..|... +  .|..+.+++.+.+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            56789999999999999999998888999 68888887531       12233 345421 1  344444234444443 


Q ss_pred             CCCCccEEEECCC
Q 019042          224 FPEGIDIYFENVG  236 (347)
Q Consensus       224 ~~~~~d~vid~~g  236 (347)
                        +.+|+||.+.|
T Consensus       334 --~~ld~VVh~AG  344 (511)
T 2z5l_A          334 --YPPNAVFHTAG  344 (511)
T ss_dssp             --SCCSEEEECCC
T ss_pred             --CCCcEEEECCc
Confidence              46999999988

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.53  E-value=0.0073  Score=50.28  Aligned_cols=100  Identities=13%  Similarity=0.145  Sum_probs=66.9

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC-Cee--EecCChhhHHHHHHHHCCC
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGF-DDA--FNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~-~~v--i~~~~~~~~~~~i~~~~~~  226 (347)
                      ...++||++||=.|+  |.|..+..+|+..|-  +|++++.+++..+.+++.... ..+  +..+.. +. .... ...+
T Consensus        72 ~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~-~p-~~~~-~~~~  146 (233)
T 4df3_A           72 ELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR-FP-EKYR-HLVE  146 (233)
T ss_dssp             CCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-CG-GGGT-TTCC
T ss_pred             hcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-Cc-cccc-cccc
Confidence            368899999999995  668899999998875  899999999988777733322 112  111111 10 0111 1112


Q ss_pred             CccEEEECCCch-----hHHHHHHhhccCCEEEEE
Q 019042          227 GIDIYFENVGGK-----MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       227 ~~d~vid~~g~~-----~~~~~~~~l~~~G~~v~~  256 (347)
                      .+|+||....-.     .+..+.+.|+++|++++.
T Consensus       147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            689888655431     567788899999999875

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.51  E-value=0.01  Score=52.54  Aligned_cols=94  Identities=23%  Similarity=0.212  Sum_probs=61.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHH--HhCCCe-eEecCChhhHHHHHHHHCCCCccEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----EKVNLLKN--KFGFDD-AFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~----~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      .+|||+||+|.+|...++.+...|.+|++++++.    ++.+.+.+  ..+... ..|..+.+++.+.+.+   .++|+|
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~V   87 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDIV   87 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCEE
Confidence            5799999999999999999999999999999866    45443331  234432 2344444244444442   159999


Q ss_pred             EECCCch---hHHHHHHhhccCC---EEEE
Q 019042          232 FENVGGK---MLDAVLLNMRIHG---RIAV  255 (347)
Q Consensus       232 id~~g~~---~~~~~~~~l~~~G---~~v~  255 (347)
                      |.+.+..   .....++.++..|   +++.
T Consensus        88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           88 VSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            9999863   3344555555444   6653

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.49  E-value=0.0081  Score=51.23  Aligned_cols=96  Identities=17%  Similarity=0.055  Sum_probs=65.6

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +||+...++..+.+...--.|.+++|.|+++-+|..+++++...|++|+++.+...                     ++.
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~---------------------~L~  198 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK---------------------DLS  198 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch---------------------hHH
Confidence            44444444445544333347999999998667999999999999999888764311                     333


Q ss_pred             HHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          218 AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.++     .+|++|.++|...+ ---+.++++-.++.+|...
T Consensus       199 ~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          199 LYTR-----QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HHHT-----TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             HHhh-----cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence            3333     28999999987532 1224678888888888753

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.49  E-value=0.011  Score=50.49  Aligned_cols=96  Identities=19%  Similarity=0.068  Sum_probs=66.4

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +||+...++..|.+..---.|.+++|.|.++-+|..+++++...|++|+++.+..                    . ++.
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------------~-~L~  199 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------------R-DLA  199 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------------c-CHH
Confidence            4544444555554433334799999999866799999999999999998876421                    1 344


Q ss_pred             HHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          218 AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.+++     +|++|.++|...+ ---+.++++..++.+|...
T Consensus       200 ~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          200 DHVSR-----ADLVVVAAGKPGL-VKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHHT-----CSEEEECCCCTTC-BCGGGSCTTCEEEECCSCS
T ss_pred             HHhcc-----CCEEEECCCCCCC-CCHHHcCCCeEEEEecccc
Confidence            44443     8999999987522 1124679999999998743

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.47  E-value=0.012  Score=50.58  Aligned_cols=96  Identities=15%  Similarity=0.003  Sum_probs=65.5

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +||+...++..|.+..---.|.+++|.|.++-+|..+++++...|++|+++.+...                     ++.
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~---------------------~l~  203 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS---------------------TED  203 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC---------------------HHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC---------------------Cch
Confidence            45444445555544333357999999998666999999999999999988875322                     222


Q ss_pred             --HHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          218 --AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       218 --~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                        +.+++     +|+||.++|...+- --..++++..++.+|...
T Consensus       204 l~~~~~~-----ADIVI~Avg~p~~I-~~~~vk~GavVIDvgi~~  242 (300)
T 4a26_A          204 MIDYLRT-----ADIVIAAMGQPGYV-KGEWIKEGAAVVDVGTTP  242 (300)
T ss_dssp             HHHHHHT-----CSEEEECSCCTTCB-CGGGSCTTCEEEECCCEE
T ss_pred             hhhhhcc-----CCEEEECCCCCCCC-cHHhcCCCcEEEEEeccC
Confidence              33332     89999999875221 124579999999998753

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.46  E-value=0.011  Score=50.93  Aligned_cols=64  Identities=8%  Similarity=0.107  Sum_probs=45.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      ++..+|||+||+|.+|...++.+...|.+|++++++.               .|..+.+.+.+.+.+.   ++|+||.++
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~A   71 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINCA   71 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEECC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEECC
Confidence            4567999999999999999999988999999998751               2333332344444322   489999988


Q ss_pred             Cc
Q 019042          236 GG  237 (347)
Q Consensus       236 g~  237 (347)
                      +.
T Consensus        72 ~~   73 (292)
T 1vl0_A           72 AH   73 (292)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.46  E-value=0.033  Score=47.40  Aligned_cols=86  Identities=13%  Similarity=0.089  Sum_probs=63.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +.+++|+|+ |+.|.+++..+...|.+|++..|+.++.+.+. +++.. ...+.+   +       .  .+|+||+|+..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~---l-------~--~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPP---K-------S--AFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCC---S-------S--CCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHH---h-------c--cCCEEEEcccC
Confidence            889999996 99999999999999999999999998887777 78753 333332   1       1  48999998863


Q ss_pred             h-----hH--HHHHHhhccCCEEEEEcc
Q 019042          238 K-----ML--DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       238 ~-----~~--~~~~~~l~~~G~~v~~g~  258 (347)
                      .     .+  ......++++..++.+..
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred             CCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence            2     12  222236788888887755

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.46  E-value=0.011  Score=51.57  Aligned_cols=91  Identities=12%  Similarity=0.108  Sum_probs=58.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHH--HHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLK--NKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~--~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      .+|+|+||+|.+|...++.+...|.+|++++++.+ +.+.++  ...++.. ..|..+.+++.+.+    . ++|+||.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~----~-~~d~vi~~   86 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELM----K-KVDVVISA   86 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHH----T-TCSEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHH----c-CCCEEEEC
Confidence            47999999999999999999999999999998764 333222  0345432 23444432333333    2 49999999


Q ss_pred             CCch---hHHHHHHhhccC---CEEE
Q 019042          235 VGGK---MLDAVLLNMRIH---GRIA  254 (347)
Q Consensus       235 ~g~~---~~~~~~~~l~~~---G~~v  254 (347)
                      ++..   ....+++.++..   +++|
T Consensus        87 a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           87 LAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            8852   234444444433   4666

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.45  E-value=0.013  Score=52.18  Aligned_cols=96  Identities=17%  Similarity=0.132  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHh-CCCe-eEe-cCChhhHHHHHHHHCCCCccEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV--NLLKNKF-GFDD-AFN-YKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~--~~~~~~~-g~~~-vi~-~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      +.+|+|+||+|.+|...++.+...|.+|++++++.++.  +.+. .. +... ..| ..+.+++.+.+    . ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~~~l~~~~----~-~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNVPLMDTLF----E-GAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCHHHHHHHH----T-TCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCHHHHHHHH----h-cCCEEE
Confidence            45799999999999999998888899999999876543  2233 22 2221 123 33431233322    2 489999


Q ss_pred             ECCCch------hHHHHHHhhcc-C--CEEEEEccc
Q 019042          233 ENVGGK------MLDAVLLNMRI-H--GRIAVCGMI  259 (347)
Q Consensus       233 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~  259 (347)
                      .+.+..      ....+++.++. +  +++|.+++.
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            776531      12334444433 3  588888764

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.45  E-value=0.013  Score=50.25  Aligned_cols=101  Identities=6%  Similarity=0.061  Sum_probs=70.0

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh----CCCeeEecCChhhHHHHHHHHC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF----GFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      ....+.++++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+    |...+ ..... |+.+   ...
T Consensus       104 ~~~~~~~~~~VLD~G~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~---~~~  176 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIAD---FIS  176 (275)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTT---CCC
T ss_pred             HHcCCCCcCEEEEecC--CCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcE-EEEEC-chhc---cCc
Confidence            4467889999999984  4788888888873  679999999999888877443    53321 11111 2221   111


Q ss_pred             CCCccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       177 ~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          177 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             CCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2369999976654  478899999999999987754

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.45  E-value=0.012  Score=50.49  Aligned_cols=105  Identities=13%  Similarity=0.029  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .+.+++|+|+ |+.|.+++..+...|+ +|+++.|+.++.+.+.+.+.   .+++.   ++    .++   .+|+||+|+
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~~---~l----~~l---~~DivInaT  186 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISYD---EL----SNL---KGDVIINCT  186 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEHH---HH----TTC---CCSEEEECS
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccHH---HH----Hhc---cCCEEEECC
Confidence            5889999996 9999999999999999 99999999988765542331   23221   22    222   499999998


Q ss_pred             Cch---h---HHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccce
Q 019042          236 GGK---M---LDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIR  282 (347)
Q Consensus       236 g~~---~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      ...   .   .......++++..++.+...       +.....+.....++++
T Consensus       187 p~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~-------P~~T~ll~~A~~~G~~  232 (282)
T 3fbt_A          187 PKGMYPKEGESPVDKEVVAKFSSAVDLIYN-------PVETLFLKYARESGVK  232 (282)
T ss_dssp             STTSTTSTTCCSSCHHHHTTCSEEEESCCS-------SSSCHHHHHHHHTTCE
T ss_pred             ccCccCCCccCCCCHHHcCCCCEEEEEeeC-------CCCCHHHHHHHHCcCe
Confidence            531   1   11234567777777776542       2233344444455554

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.44  E-value=0.01  Score=51.83  Aligned_cols=76  Identities=11%  Similarity=0.145  Sum_probs=49.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      ..++..+|||+||+|.+|..+++.+...|.+|++++++..+ +    .++... ..|..+.+.+.+.+..   +++|+||
T Consensus         8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vi   79 (321)
T 2pk3_A            8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIF   79 (321)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEE
T ss_pred             cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEE
Confidence            34566799999999999999999999899999999987653 1    122211 1244343233333332   2589999


Q ss_pred             ECCCc
Q 019042          233 ENVGG  237 (347)
Q Consensus       233 d~~g~  237 (347)
                      .+++.
T Consensus        80 h~A~~   84 (321)
T 2pk3_A           80 HLAAK   84 (321)
T ss_dssp             ECCSC
T ss_pred             EcCcc
Confidence            99874

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.43  E-value=0.018  Score=50.42  Aligned_cols=88  Identities=19%  Similarity=0.151  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -.|.+|.|+| .|.+|...++.++..|++|++.+++.++. .+. ++|+..    .   ++.+.+.+     .|+|+-+.
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~----~---~l~ell~~-----aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKA----V---SLEELLKN-----SDVISLHV  204 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEE----C---CHHHHHHH-----CSEEEECC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCcee----c---CHHHHHhh-----CCEEEEec
Confidence            3588999999 59999999999999999999999887664 345 677642    1   33334433     79999988


Q ss_pred             Cc-h----hH-HHHHHhhccCCEEEEEcc
Q 019042          236 GG-K----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~-~----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      .. +    .+ ...+..+++++.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            64 2    22 566788999999988876

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.42  E-value=0.014  Score=54.34  Aligned_cols=82  Identities=17%  Similarity=0.167  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHH---H----HHHHHHHhCCC-e--eEecCChhhHHHHHHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKE---K----VNLLKNKFGFD-D--AFNYKKEPDLDAALKR  222 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~---~----~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~  222 (347)
                      .++++.++||+|++|++|...++.+...|+ +|+.+.++..   +    .+.++ ..|.. .  ..|..+.+++.+.+.+
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~  300 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG  300 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHH
Confidence            356789999999999999999888888899 5999988763   1    12233 45653 1  2344444244455554


Q ss_pred             HCC-CCccEEEECCC
Q 019042          223 CFP-EGIDIYFENVG  236 (347)
Q Consensus       223 ~~~-~~~d~vid~~g  236 (347)
                      ... +.+|.||.+.|
T Consensus       301 i~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAA  315 (486)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             HHhcCCCcEEEECCc
Confidence            422 26899999988

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.41  E-value=0.011  Score=52.27  Aligned_cols=88  Identities=16%  Similarity=0.194  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -.|.+|.|+| .|.+|...++.++..|++|++.+++.++ +.+. ++|+..    .   ++.+.+.     ..|+|+.+.
T Consensus       163 l~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~-----~aDvV~l~~  227 (335)
T 2g76_A          163 LNGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQ----L---PLEEIWP-----LCDFITVHT  227 (335)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEE----C---CHHHHGG-----GCSEEEECC
T ss_pred             CCcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----C---CHHHHHh-----cCCEEEEec
Confidence            3588999999 5999999999999999999999987665 3455 677642    1   3333332     389999987


Q ss_pred             Cch-----hH-HHHHHhhccCCEEEEEcc
Q 019042          236 GGK-----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~-----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      ...     .+ ...+..+++++.++.++.
T Consensus       228 P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            642     22 467788999999998876

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.41  E-value=0.013  Score=50.94  Aligned_cols=92  Identities=18%  Similarity=0.205  Sum_probs=58.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC------HHHHHHHHH--HhCCCe-eEecCChhhHHHHHHHHCCCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS------KEKVNLLKN--KFGFDD-AFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~------~~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      ..+|+|+||+|.+|...++.+...|.+|++++++      +++.+.+++  ..|... ..|..+.+.+.+.++     ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~   78 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----NV   78 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----CC
Confidence            3579999999999999999999999999999986      344443330  234321 234444323433333     49


Q ss_pred             cEEEECCCch---hHHHHHHhhccC---CEEE
Q 019042          229 DIYFENVGGK---MLDAVLLNMRIH---GRIA  254 (347)
Q Consensus       229 d~vid~~g~~---~~~~~~~~l~~~---G~~v  254 (347)
                      |+||.+++..   .....++.++..   ++++
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           79 DVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            9999999852   223444444332   4776

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.41  E-value=0.012  Score=55.46  Aligned_cols=82  Identities=11%  Similarity=-0.016  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEE-eCCH-------------H----HHHHHHHHhCCCe---eEecC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGS-AGSK-------------E----KVNLLKNKFGFDD---AFNYK  211 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~-~~~~-------------~----~~~~~~~~~g~~~---vi~~~  211 (347)
                      .++++.++||+|++|++|...++.+...|++ ++.+ .++.             +    ..+.++ ..|...   ..|..
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence            4567899999999999999999888888996 6666 6652             2    123334 456531   23444


Q ss_pred             ChhhHHHHHHHHCC-CCccEEEECCC
Q 019042          212 KEPDLDAALKRCFP-EGIDIYFENVG  236 (347)
Q Consensus       212 ~~~~~~~~i~~~~~-~~~d~vid~~g  236 (347)
                      +.+++.+.+.++.. +.+|.||.+.|
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCc
Confidence            44345555555432 27899999998

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.40  E-value=0.022  Score=45.34  Aligned_cols=98  Identities=15%  Similarity=0.176  Sum_probs=66.6

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC--eeEecCChhhHHHHHHHHCCCC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD--DAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ..+.++++||=.|+  |.|..+..+++. +.+|++++.+++..+.+++.   .|..  .++. .+.   . .+....++.
T Consensus        18 ~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~---~-~l~~~~~~~   89 (185)
T 3mti_A           18 EVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGH---E-NLDHYVREP   89 (185)
T ss_dssp             TTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCG---G-GGGGTCCSC
T ss_pred             HhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcH---H-HHHhhccCC
Confidence            46788999999884  568888888887 88999999999887777643   2432  2222 221   1 122222347


Q ss_pred             ccEEEECCCc----------------hhHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGG----------------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+|+.+.+-                ..+..+.+.|+++|+++.+..
T Consensus        90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9999865321                145778899999999988755

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.39  E-value=0.014  Score=49.55  Aligned_cols=93  Identities=12%  Similarity=0.038  Sum_probs=66.8

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +||+....+..+.+. + -.|.+++|.|+++-+|..+++++...|++|+++.+..                    . ++.
T Consensus       132 ~PcTp~gv~~lL~~~-~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------------~-~L~  188 (276)
T 3ngx_A          132 VPATPRAVIDIMDYY-G-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------------K-DIG  188 (276)
T ss_dssp             CCHHHHHHHHHHHHH-T-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHH
T ss_pred             CCCcHHHHHHHHHHh-C-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------c-cHH
Confidence            454445555555444 4 6799999999866799999999999999998876421                    1 455


Q ss_pred             HHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEEcccc
Q 019042          218 AALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.+++     +|++|.++|.. .+..  ..++++..++.+|...
T Consensus       189 ~~~~~-----ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          189 SMTRS-----SKIVVVAVGRPGFLNR--EMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HHHHH-----SSEEEECSSCTTCBCG--GGCCTTCEEEECCCEE
T ss_pred             Hhhcc-----CCEEEECCCCCccccH--hhccCCcEEEEeccCc
Confidence            55554     89999999874 2222  4578999999888753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.38  E-value=0.01  Score=51.37  Aligned_cols=74  Identities=20%  Similarity=0.084  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHH--HHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKV--NLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~--~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ..+|+|+||+|.+|...++.+...| .+|+++++++++.  +.+. ..+... ..|..+.+++.+.+    . ++|+||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~----~-~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQVIMELAL----N-GAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCHHHHHHHH----T-TCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCHHHHHHHH----h-cCCEEEE
Confidence            4689999999999999998888888 8999999886543  2233 345432 23444432232222    2 4999999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      +.+.
T Consensus        79 ~a~~   82 (299)
T 2wm3_A           79 VTNY   82 (299)
T ss_dssp             CCCH
T ss_pred             eCCC
Confidence            9873

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.38  E-value=0.0078  Score=52.96  Aligned_cols=80  Identities=11%  Similarity=0.112  Sum_probs=50.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhC----CCe-eEecCChhhHHHHHHHHCCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV--NLLKNKFG----FDD-AFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~--~~~~~~~g----~~~-vi~~~~~~~~~~~i~~~~~~  226 (347)
                      .-.++.+|||+||+|.+|...++.+...|.+|++++++..+.  ..++ .+.    ... ..|..+.+++.+.+...   
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc---
Confidence            445788999999999999999999988999999999875431  2222 221    111 12333432333444332   


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|+||.+++.
T Consensus        86 ~~d~Vih~A~~   96 (335)
T 1rpn_A           86 QPQEVYNLAAQ   96 (335)
T ss_dssp             CCSEEEECCSC
T ss_pred             CCCEEEECccc
Confidence            48999999874

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.38  E-value=0.087  Score=45.21  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=35.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      .+|.|+|+ |.+|...++.+...|.+|++.++++++.+.++
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAK   44 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            57999995 99999999999999999999999998877666

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=96.36  E-value=0.022  Score=49.74  Aligned_cols=96  Identities=11%  Similarity=0.076  Sum_probs=66.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .+||++|  +|.|.++..+++.+ +.+|+++..+++-.+.+++.++..  .-+..... |..+.+.....+.||+||-..
T Consensus        91 ~rVLdIG--~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~~fDvIi~D~  167 (317)
T 3gjy_A           91 LRITHLG--GGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD-DARMVAESFTPASRDVIIRDV  167 (317)
T ss_dssp             CEEEEES--CGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTTCEEEEEECC
T ss_pred             CEEEEEE--CCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC-cHHHHHhhccCCCCCEEEECC
Confidence            3899999  57788899999965 779999999999889998666531  11111112 444445444344799987633


Q ss_pred             C-----------chhHHHHHHhhccCCEEEEEc
Q 019042          236 G-----------GKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       236 g-----------~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .           .+.+..+.++|+++|.++.-.
T Consensus       168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence            1           124778889999999987554

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.36  E-value=0.0064  Score=53.81  Aligned_cols=104  Identities=18%  Similarity=0.221  Sum_probs=67.1

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHhC--------------CCeeEecCChh
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKFG--------------FDDAFNYKKEP  214 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~g--------------~~~vi~~~~~~  214 (347)
                      ....+.++++||-.|+ | .|..++.+++..|  .+|++++.++...+.+++.+.              ... +..... 
T Consensus        99 ~~l~~~~g~~VLDiG~-G-~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~-v~~~~~-  174 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-G-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN-VDFIHK-  174 (336)
T ss_dssp             HHHTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC-EEEEES-
T ss_pred             HhcCCCCCCEEEEeCC-C-cCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc-eEEEEC-
Confidence            4457889999999994 4 4888888998876  699999999988777764321              111 111111 


Q ss_pred             hHHHHHHHHCCCCccEEEECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          215 DLDAALKRCFPEGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       215 ~~~~~i~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |..+....+..+.+|+|+-....  ..+..+.+.|+++|+++....
T Consensus       175 d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          175 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            11111111112359999876554  368889999999999997654

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.35  E-value=0.013  Score=47.99  Aligned_cols=97  Identities=16%  Similarity=0.134  Sum_probs=67.2

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      ..+.++.+||-.|+  |.|..+..+++. |.+|++++.+++..+.++ +.+...+ ..... |+.+.   ...+.+|+|+
T Consensus        42 ~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~-~~~~~-d~~~~---~~~~~~D~v~  112 (218)
T 3ou2_A           42 RAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNV-EFRQQ-DLFDW---TPDRQWDAVF  112 (218)
T ss_dssp             TTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTE-EEEEC-CTTSC---CCSSCEEEEE
T ss_pred             hcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCe-EEEec-ccccC---CCCCceeEEE
Confidence            45778889999984  458888888887 889999999999888888 5553321 11111 22111   1223799998


Q ss_pred             ECCCc---------hhHHHHHHhhccCCEEEEEcc
Q 019042          233 ENVGG---------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       233 d~~g~---------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ....-         ..+..+.+.|+++|.++....
T Consensus       113 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          113 FAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            75431         256778889999999988755

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.35  E-value=0.0071  Score=53.82  Aligned_cols=76  Identities=18%  Similarity=0.298  Sum_probs=50.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCC-eeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF----GFD-DAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      +.+|||+||+|.+|...++.+...|.+|++++++..+.+.+.+.+    +.. ...|..+.+.+.+.+...   ++|+||
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi   85 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIVF   85 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEEE
Confidence            568999999999999999999989999999998765433222122    111 123444432333334332   489999


Q ss_pred             ECCC
Q 019042          233 ENVG  236 (347)
Q Consensus       233 d~~g  236 (347)
                      .+++
T Consensus        86 h~A~   89 (357)
T 1rkx_A           86 HMAA   89 (357)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9998

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.29  E-value=0.023  Score=49.52  Aligned_cols=100  Identities=10%  Similarity=0.083  Sum_probs=67.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +.++++||-.|+  |.|..+..+++..|++|++++.+++..+.+++.   .|...-+..... |+.+ + ....+.+|+|
T Consensus       115 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~-~~~~~~fD~V  189 (312)
T 3vc1_A          115 AGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC-NMLD-T-PFDKGAVTAS  189 (312)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-CCCTTCEEEE
T ss_pred             CCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC-Chhc-C-CCCCCCEeEE
Confidence            788999999984  568888999988899999999999887777632   333211111111 1110 0 0112379999


Q ss_pred             EECCC------chhHHHHHHhhccCCEEEEEccc
Q 019042          232 FENVG------GKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       232 id~~g------~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +....      ...+..+.+.|+++|+++.....
T Consensus       190 ~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~  223 (312)
T 3vc1_A          190 WNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGC  223 (312)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            86433      24788889999999999987643

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.28  E-value=0.0042  Score=54.90  Aligned_cols=72  Identities=18%  Similarity=0.172  Sum_probs=48.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|||+||+|.+|...++.+...|.+|++++++..+.+.+. ..+... ..|..+.    +.+.+... ++|+||.+++.
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~----~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDH----AGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCH----HHHHHHTT-TCSEEEEC---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCH----HHHHHHHc-CCCEEEECCcc
Confidence            7999999999999999999999999999998876543333 223321 1233332    23333332 49999999873

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.27  E-value=0.014  Score=50.15  Aligned_cols=95  Identities=16%  Similarity=0.123  Sum_probs=64.1

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +||+....+..|.+..---.|.+++|.|++..+|.-+++++...|++|+++.+..                    . ++.
T Consensus       145 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~  203 (301)
T 1a4i_A          145 IPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT--------------------A-HLD  203 (301)
T ss_dssp             CCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-SHH
T ss_pred             cCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc--------------------c-cHH
Confidence            3444333343443322224789999999855789999999999999998875321                    1 444


Q ss_pred             HHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          218 AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.+++     +|+||-++|...+ ---+.++++..++.+|..
T Consensus       204 ~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          204 EEVNK-----GDILVVATGQPEM-VKGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             HHHTT-----CSEEEECCCCTTC-BCGGGSCTTCEEEECCCB
T ss_pred             HHhcc-----CCEEEECCCCccc-CCHHHcCCCcEEEEccCC
Confidence            44443     8999999998532 122357899999999875

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.26  E-value=0.033  Score=48.66  Aligned_cols=89  Identities=11%  Similarity=0.082  Sum_probs=63.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH-HHHHHCCCCccEEEECC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA-ALKRCFPEGIDIYFENV  235 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~-~i~~~~~~~~d~vid~~  235 (347)
                      .+|.|+| .|.+|...++.++..|.  +|++.++++++.+.++ ++|.......    +..+ .+     ..+|+||-|+
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~----~~~~~~~-----~~aDvVilav  102 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTT----SIAKVED-----FSPDFVMLSS  102 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEES----CTTGGGG-----GCCSEEEECS
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcC----CHHHHhh-----ccCCEEEEeC
Confidence            5899999 59999999999999998  9999999999988888 8886321111    1111 11     1489999998


Q ss_pred             Cch----hHHHHHHhhccCCEEEEEcc
Q 019042          236 GGK----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ...    .+......++++..++.+++
T Consensus       103 p~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          103 PVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             CGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             CHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            764    33444456677777776655

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.26  E-value=0.0043  Score=54.68  Aligned_cols=77  Identities=8%  Similarity=-0.019  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN-LLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~-~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ++.+|||+||+|.+|..+++.+...|.+|++++++..... .+. .+....  ..|..+.+++.+.+.+.   ++|+||.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih   94 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP-PVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVH   94 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC-SCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh-ccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEE
Confidence            4568999999999999999999889999999998543211 111 221111  23444432344444432   5999999


Q ss_pred             CCCc
Q 019042          234 NVGG  237 (347)
Q Consensus       234 ~~g~  237 (347)
                      +++.
T Consensus        95 ~A~~   98 (330)
T 2pzm_A           95 SAAA   98 (330)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9874

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.25  E-value=0.0068  Score=51.12  Aligned_cols=102  Identities=14%  Similarity=0.125  Sum_probs=67.8

Q ss_pred             hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCC
Q 019042          150 YELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       150 ~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      .....+.++++||-.|+  |.|..+..+++..|.+|++++.++...+.+++.   .|...-+..... |+.+.   ...+
T Consensus        29 ~~~~~~~~~~~VLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~~~  102 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAGY---VANE  102 (256)
T ss_dssp             HHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTTC---CCSS
T ss_pred             HHhcCCCCCCEEEEECC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-ChHhC---CcCC
Confidence            34567889999999984  458889999998899999999999877777632   243211111111 11110   0123


Q ss_pred             CccEEEECCC-----c--hhHHHHHHhhccCCEEEEEc
Q 019042          227 GIDIYFENVG-----G--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       227 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+|+|+....     .  ..+..+.++|+++|+++...
T Consensus       103 ~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          103 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            6999986322     1  25788888999999998764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.25  E-value=0.016  Score=50.36  Aligned_cols=92  Identities=13%  Similarity=0.057  Sum_probs=59.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      .+|||+||+|.+|...++.+...|.+|+++++++.+.+ +.   +.. ++.. +- . .+.+.+... ++|+||.+++..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~-~~~~-Dl-~-~~~~~~~~~-~~d~Vih~a~~~   73 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYE-YRVS-DY-T-LEDLINQLN-DVDAVVHLAATR   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCE-EEEC-CC-C-HHHHHHHTT-TCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceE-EEEc-cc-c-HHHHHHhhc-CCCEEEEccccC
Confidence            58999999999999999999999999999999855444 32   332 2211 11 3 344554443 699999998741


Q ss_pred             --------------hHHHHHHhhccC--CEEEEEccc
Q 019042          239 --------------MLDAVLLNMRIH--GRIAVCGMI  259 (347)
Q Consensus       239 --------------~~~~~~~~l~~~--G~~v~~g~~  259 (347)
                                    .....++.++..  .++|.+++.
T Consensus        74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~  110 (311)
T 3m2p_A           74 GSQGKISEFHDNEILTQNLYDACYENNISNIVYASTI  110 (311)
T ss_dssp             CSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence                          123344444443  478877753

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.24  E-value=0.041  Score=45.36  Aligned_cols=101  Identities=16%  Similarity=0.118  Sum_probs=68.0

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCC------CEEEEEeCCHHHHHHHHHH---hC-----CC--eeEecCChhhHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVG------CYVVGSAGSKEKVNLLKNK---FG-----FD--DAFNYKKEPDLD  217 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G------~~V~~~~~~~~~~~~~~~~---~g-----~~--~vi~~~~~~~~~  217 (347)
                      .+.++++||-.|+ | .|..+..+++..+      .+|++++.+++..+.+++.   .+     ..  .++..+....+.
T Consensus        77 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-G-SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC-T-TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC-C-CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            5788999999994 4 4889999999876      5999999999887777633   23     11  222221110110


Q ss_pred             HHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          218 AALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +....  .+.+|+|+..... ..+..+.+.|+++|+++..-.
T Consensus       155 ~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          155 EEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            00011  1369999987765 467888999999999987654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.24  E-value=0.034  Score=47.75  Aligned_cols=90  Identities=11%  Similarity=0.002  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC---CeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGF---DDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      .+.+++|+|+ |++|.+++..+...|+ +|++..++.++.+.+.++++.   ..+.++.   ++       . ..+|+||
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~---~l-------~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE---QL-------K-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG---GC-------C-SCEEEEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH---Hh-------c-CCCCEEE
Confidence            6789999996 9999999999999997 999999999887666546653   1233332   11       1 3599999


Q ss_pred             ECCCchhHHH----HHHhhccCCEEEEEcc
Q 019042          233 ENVGGKMLDA----VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       233 d~~g~~~~~~----~~~~l~~~G~~v~~g~  258 (347)
                      +|++......    ....++++..++.+..
T Consensus       193 naTp~gm~~~~~~l~~~~l~~~~~V~DlvY  222 (281)
T 3o8q_A          193 NSTSASLDGELPAIDPVIFSSRSVCYDMMY  222 (281)
T ss_dssp             ECSCCCC----CSCCGGGEEEEEEEEESCC
T ss_pred             EcCcCCCCCCCCCCCHHHhCcCCEEEEecC
Confidence            9987532111    1234566656666544

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.23  E-value=0.012  Score=50.57  Aligned_cols=95  Identities=15%  Similarity=0.123  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh----CC--------CeeEecCChhhHHHHHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKF----GF--------DDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~----g~--------~~vi~~~~~~~~~~~i~~  222 (347)
                      .++.+||++|+  |.|..+..+++. +. +|++++.+++-.+.+++.+    +.        ..-+..... |..+.+..
T Consensus        74 ~~~~~VLdiG~--G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~-D~~~~l~~  149 (281)
T 1mjf_A           74 PKPKRVLVIGG--GDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN  149 (281)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH
T ss_pred             CCCCeEEEEcC--CcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC-chHHHhcc
Confidence            35689999994  567888888887 65 9999999999888888555    21        111111112 44344443


Q ss_pred             HCCCCccEEEECCC-----------chhHHHHHHhhccCCEEEEE
Q 019042          223 CFPEGIDIYFENVG-----------GKMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       223 ~~~~~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  256 (347)
                        .+.+|+|+-...           .+.+..+.+.|+++|.++.-
T Consensus       150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence              447999875432           13578888999999999875

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.23  E-value=0.013  Score=49.91  Aligned_cols=96  Identities=16%  Similarity=0.048  Sum_probs=66.0

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      +||+.......+.+...--.|.+++|.|++.-+|.-+++++...|++|+++.+..                    . ++.
T Consensus       139 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~  197 (288)
T 1b0a_A          139 RPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------------K-NLR  197 (288)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------------S-CHH
T ss_pred             CCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHH
Confidence            4444444444443333234789999999855789999999999999999885332                    1 455


Q ss_pred             HHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          218 AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.+++     +|+||-++|...+ ---+.++++..++.+|...
T Consensus       198 ~~~~~-----ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          198 HHVEN-----ADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HHHHH-----CSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred             HHhcc-----CCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence            55554     8999999997532 1123468899999998753

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.23  E-value=0.044  Score=49.87  Aligned_cols=94  Identities=18%  Similarity=0.283  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeE-ecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAF-NYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +.+|+|.|. |-+|+.+++.++..|..|++++.++++.+.++ +.|...++ |..+. +   .+++..-..+|+++-+++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~~-~---~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMKVFYGDATRM-D---LLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCCCEESCTTCH-H---HHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCCH-H---HHHhcCCCccCEEEECCC
Confidence            457999995 99999999999999999999999999999998 88875322 33332 2   343332237999999998


Q ss_pred             ch----hHHHHHHhhccCCEEEEEc
Q 019042          237 GK----MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       237 ~~----~~~~~~~~l~~~G~~v~~g  257 (347)
                      ..    .+-...+.+.+.-+++.-.
T Consensus        78 ~~~~n~~i~~~ar~~~p~~~Iiara  102 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPHLQIIARA  102 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence            74    2233344555666666544

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.21  E-value=0.01  Score=49.05  Aligned_cols=75  Identities=16%  Similarity=0.174  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC----------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHH
Q 019042          157 KGEYVYVSAA----------------SGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL  220 (347)
Q Consensus       157 ~~~~vlI~ga----------------~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i  220 (347)
                      .|.+|||+||                +|++|.+.++.+...|++|+.+.+... .+.   ..|. .+++..+..++.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~---~~g~-~~~dv~~~~~~~~~v   81 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT---PPFV-KRVDVMTALEMEAAV   81 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC---CTTE-EEEECCSHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc---CCCC-eEEccCcHHHHHHHH
Confidence            5789999999                589999999999999999999876531 110   1122 355655433444555


Q ss_pred             HHHCCCCccEEEECCCc
Q 019042          221 KRCFPEGIDIYFENVGG  237 (347)
Q Consensus       221 ~~~~~~~~d~vid~~g~  237 (347)
                      .+.. +++|++|.++|-
T Consensus        82 ~~~~-~~~Dili~~Aav   97 (226)
T 1u7z_A           82 NASV-QQQNIFIGCAAV   97 (226)
T ss_dssp             HHHG-GGCSEEEECCBC
T ss_pred             HHhc-CCCCEEEECCcc
Confidence            4433 358999999885

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.21  E-value=0.028  Score=49.60  Aligned_cols=87  Identities=15%  Similarity=0.218  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+|. |.+|...++.++..|.+|++.+++.++ +.+. ++|..    +.   ++.+.+.+     .|+|+.+..
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~----~~---~l~~~l~~-----aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-ELNAE----FK---PLEDLLRE-----SDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HHCCE----EC---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-hcCcc----cC---CHHHHHhh-----CCEEEECCC
Confidence            5789999994 999999999999999999999988776 5555 66753    11   34444443     799999886


Q ss_pred             ch-----hH-HHHHHhhccCCEEEEEcc
Q 019042          237 GK-----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~~-----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      ..     .+ ......++++..++.++.
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            52     22 356778899888887764

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.21  E-value=0.013  Score=48.57  Aligned_cols=99  Identities=14%  Similarity=0.057  Sum_probs=68.3

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ....+.++++||-.|+ | .|..+..+++.. .+|++++.+++..+.+++.+...   .++..    |..+.+.  ..+.
T Consensus        64 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~----d~~~~~~--~~~~  134 (231)
T 1vbf_A           64 DELDLHKGQKVLEIGT-G-IGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILG----DGTLGYE--EEKP  134 (231)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEES----CGGGCCG--GGCC
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC----Ccccccc--cCCC
Confidence            4457788999999994 4 488888888864 89999999999888888444321   12222    2111110  1236


Q ss_pred             ccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+|+....- .....+.+.|+++|+++..-.
T Consensus       135 fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          135 YDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             EEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             ccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            9999977654 345778899999999987643

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.18  E-value=0.035  Score=46.25  Aligned_cols=95  Identities=14%  Similarity=0.027  Sum_probs=65.5

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      ..+.++.+||=+|+  |.|..+..+++. |++|++++.+++..+.++ +.  ...+   .. +..+.+..+..+.+|+|+
T Consensus        37 ~~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~--~~~~---~~-d~~~~~~~~~~~~fD~i~  106 (240)
T 3dli_A           37 PYFKGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK--FNVV---KS-DAIEYLKSLPDKYLDGVM  106 (240)
T ss_dssp             GGTTTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT--SEEE---CS-CHHHHHHTSCTTCBSEEE
T ss_pred             hhhcCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh--ccee---ec-cHHHHhhhcCCCCeeEEE
Confidence            34577889999984  567777777765 889999999999888887 33  2222   22 433333333334799998


Q ss_pred             ECCC---------chhHHHHHHhhccCCEEEEEc
Q 019042          233 ENVG---------GKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       233 d~~g---------~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ....         ...+..+.+.|+++|.++...
T Consensus       107 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A          107 ISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             ECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            6432         135778888999999998754

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.18  E-value=0.0097  Score=52.45  Aligned_cols=88  Identities=10%  Similarity=0.047  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|...++.++..|++|++.+++..+.+... .+|+..    .   ++.+.+.+     .|+|+-+..
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~----~---~l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLRQ----V---ACSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCcee----C---CHHHHHhh-----CCEEEEcCC
Confidence            478999999 599999999999999999999998764444455 666521    1   33344443     788888776


Q ss_pred             c--h---hH-HHHHHhhccCCEEEEEcc
Q 019042          237 G--K---ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~--~---~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      .  +   .+ ...+..|+++..+|.++.
T Consensus       210 ~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            3  1   22 466778888888888774

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.17  E-value=0.022  Score=49.83  Aligned_cols=98  Identities=12%  Similarity=0.074  Sum_probs=66.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCC------CeeEecCChhhHHHHHHHHCCCCc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGF------DDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      .++.+||++|  +|.|..+..+++.. +.+|+++..+++-.+.+++.+..      +.-+..... |..+.+.. ..+.+
T Consensus       107 ~~~~~VLdIG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCEEEEEc--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCc
Confidence            3457999999  46688888888875 46999999999988888855431      111222222 44444443 33479


Q ss_pred             cEEEECCC-----------chhHHHHHHhhccCCEEEEEc
Q 019042          229 DIYFENVG-----------GKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       229 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      |+|+-...           .+.+..+.++|+++|.++.-.
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            99985442           245778889999999998754

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.16  E-value=0.011  Score=49.79  Aligned_cols=34  Identities=15%  Similarity=0.154  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK  192 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~  192 (347)
                      +.+|+|.|+ |++|..+++.+...|. ++++++.+.
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            468999995 9999999999999998 888888776

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.11  E-value=0.015  Score=50.88  Aligned_cols=102  Identities=21%  Similarity=0.233  Sum_probs=68.3

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....++++++||-+|+ | .|..+..+++..+  .+|++++.+++..+.+++.+   |... +..... |+.+...  ..
T Consensus        69 ~~l~~~~~~~VLDiGc-G-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~-d~~~~~~--~~  142 (317)
T 1dl5_A           69 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCG-DGYYGVP--EF  142 (317)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES-CGGGCCG--GG
T ss_pred             HhcCCCCcCEEEEecC-C-chHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEEC-Chhhccc--cC
Confidence            4567889999999994 4 4888888888753  47999999999888777432   4432 111111 2211111  11


Q ss_pred             CCccEEEECCCch-hHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFENVGGK-MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+|+|+....-. ....+.+.|+++|+++..-.
T Consensus       143 ~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~  176 (317)
T 1dl5_A          143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPIN  176 (317)
T ss_dssp             CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBC
T ss_pred             CCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEEC
Confidence            3699999876653 44677889999999987643

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=96.08  E-value=0.022  Score=46.97  Aligned_cols=102  Identities=11%  Similarity=0.040  Sum_probs=64.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCC--
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~--  225 (347)
                      ....++++||=+|+  +.|..++.+++..  +.+|++++.+++..+.+++   ..|...-+..... |..+.+..+..  
T Consensus        54 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~~~  130 (221)
T 3u81_A           54 IREYSPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKKY  130 (221)
T ss_dssp             HHHHCCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTTTS
T ss_pred             HHhcCCCEEEEECC--CCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHHhc
Confidence            34456789999984  6788888999865  6799999999988877774   2354321222222 44444443332  


Q ss_pred             --CCccEEEECCCchhHH---HH---HHhhccCCEEEEEc
Q 019042          226 --EGIDIYFENVGGKMLD---AV---LLNMRIHGRIAVCG  257 (347)
Q Consensus       226 --~~~d~vid~~g~~~~~---~~---~~~l~~~G~~v~~g  257 (347)
                        +.+|+||-........   ..   ++.|+++|.++.-.
T Consensus       131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~  170 (221)
T 3u81_A          131 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADN  170 (221)
T ss_dssp             CCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEESC
T ss_pred             CCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEeC
Confidence              3699998655332111   11   26899999987543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.08  E-value=0.013  Score=51.56  Aligned_cols=37  Identities=24%  Similarity=0.206  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      ++.+|||+||+|.+|...+..+...|.+|++++++.+
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   40 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPT   40 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            4678999999999999999988889999999888765

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.08  E-value=0.03  Score=55.52  Aligned_cols=82  Identities=20%  Similarity=0.171  Sum_probs=56.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHH-HCCC-EEEEEeCCHH-------HHHHHHHHhCCCe---eEecCChhhHHHHHHH
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAK-LVGC-YVVGSAGSKE-------KVNLLKNKFGFDD---AFNYKKEPDLDAALKR  222 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~-~~G~-~V~~~~~~~~-------~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~  222 (347)
                      +.++.+++|+|++|++|...++.+. ..|+ +|+.++++..       ..+.++ ..|...   ..|..+.+++.+.+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            4578999999999999999888776 7899 6888888722       123333 456532   2355554355555655


Q ss_pred             HCCC-CccEEEECCCc
Q 019042          223 CFPE-GIDIYFENVGG  237 (347)
Q Consensus       223 ~~~~-~~d~vid~~g~  237 (347)
                      .... .+|++|.++|.
T Consensus       606 ~~~~~~id~lVnnAGv  621 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGV  621 (795)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHHhCCCEEEEECCCc
Confidence            5433 78999999883

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.08  E-value=0.017  Score=51.02  Aligned_cols=77  Identities=16%  Similarity=0.130  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH----------HHHHHHHHHhCCC-e--eEecCChhhHHHHHHHHC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----------EKVNLLKNKFGFD-D--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~----------~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~  224 (347)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.          +..+.+++..+.. .  ..|..+.+.+.+.+.+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            35899999999999999999888999999997632          3334443112321 2  23444432333334321 


Q ss_pred             CCCccEEEECCCc
Q 019042          225 PEGIDIYFENVGG  237 (347)
Q Consensus       225 ~~~~d~vid~~g~  237 (347)
                        ++|+||.+++.
T Consensus        81 --~~d~vih~A~~   91 (348)
T 1ek6_A           81 --SFMAVIHFAGL   91 (348)
T ss_dssp             --CEEEEEECCSC
T ss_pred             --CCCEEEECCCC
Confidence              59999999874

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.06  E-value=0.034  Score=47.55  Aligned_cols=90  Identities=9%  Similarity=0.171  Sum_probs=62.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      .+|||+|+ |.+|...+..+...|.+|+++++++.+.+.+. ..+... +..+-. ++.       -.++|+||.+++..
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~-~~~D~~-d~~-------~~~~d~vi~~a~~~   74 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEP-LLWPGE-EPS-------LDGVTHLLISTAPD   74 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEE-EESSSS-CCC-------CTTCCEEEECCCCB
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeE-EEeccc-ccc-------cCCCCEEEECCCcc
Confidence            57999998 99999999999889999999999998777666 555432 222211 211       23699999999742


Q ss_pred             -----hHHHHHHhhcc----CCEEEEEccc
Q 019042          239 -----MLDAVLLNMRI----HGRIAVCGMI  259 (347)
Q Consensus       239 -----~~~~~~~~l~~----~G~~v~~g~~  259 (347)
                           .....++.++.    -.++|.+++.
T Consensus        75 ~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           75 SGGDPVLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             TTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             ccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence                 23444444433    2688887764

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.05  E-value=0.035  Score=47.87  Aligned_cols=100  Identities=11%  Similarity=0.073  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCccE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      .+.++.+||-+|+  |.|..+..+++..|++|++++.++...+.+++.   .|...-+..... |+.+ + ....+.+|+
T Consensus        79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~fD~  153 (297)
T 2o57_A           79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFLE-I-PCEDNSYDF  153 (297)
T ss_dssp             CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTTS-C-SSCTTCEEE
T ss_pred             CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEc-Cccc-C-CCCCCCEeE
Confidence            7788999999984  578888899988899999999999877777632   233110111111 1111 0 011236999


Q ss_pred             EEECCCc-------hhHHHHHHhhccCCEEEEEcc
Q 019042          231 YFENVGG-------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       231 vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |+....-       ..+..+.+.|+++|+++....
T Consensus       154 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          154 IWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            9875432       357888999999999987754

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.05  E-value=0.024  Score=63.47  Aligned_cols=82  Identities=15%  Similarity=0.063  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCCh-HHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHhCC---C---eeEecCChhhHHHHHHHH
Q 019042          156 KKGEYVYVSAASGA-VGQLVGQFAKLVGCYVVGSAGSKEK-----VNLLKNKFGF---D---DAFNYKKEPDLDAALKRC  223 (347)
Q Consensus       156 ~~~~~vlI~ga~g~-vG~~a~qla~~~G~~V~~~~~~~~~-----~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~  223 (347)
                      -+|++++|+||++| ||.+.++.+...|++|+++.++.++     .+.+.++++.   .   ...|..+.++....+.+.
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999 9999999999999999999987654     3333334443   1   123555543555555555


Q ss_pred             CC------CCccEEEECCCc
Q 019042          224 FP------EGIDIYFENVGG  237 (347)
Q Consensus       224 ~~------~~~d~vid~~g~  237 (347)
                      ..      |++|++++++|.
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCC
T ss_pred             HhhhhhhcCCCCEEEECCCc
Confidence            44      478999998874

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.05  E-value=0.0054  Score=50.89  Aligned_cols=97  Identities=15%  Similarity=0.100  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHh---C-----C--CeeEecCChhhH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVG-------CYVVGSAGSKEKVNLLKNKF---G-----F--DDAFNYKKEPDL  216 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G-------~~V~~~~~~~~~~~~~~~~~---g-----~--~~vi~~~~~~~~  216 (347)
                      .++++++||-+|+ | .|..+..+++..+       .+|++++.+++..+.+++.+   +     .  ..++..    |.
T Consensus        81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~----d~  154 (227)
T 1r18_A           81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG----DG  154 (227)
T ss_dssp             TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES----CG
T ss_pred             hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC----Cc
Confidence            5788999999994 4 4888889988776       49999999998777776322   1     1  112211    21


Q ss_pred             HHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          217 DAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       217 ~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+..  .+.+|+|+.+... .....+.+.|+++|+++..-.
T Consensus       155 ~~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~  195 (227)
T 1r18_A          155 RKGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  195 (227)
T ss_dssp             GGCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             ccCCCc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence            111111  1369999987765 466888999999999987543

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.04  E-value=0.037  Score=49.11  Aligned_cols=88  Identities=22%  Similarity=0.243  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|...++.++..|++|++.+++... +.+. +.|...+    +  ++.+.+.+     .|+|+-+..
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~----~--~l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGRENSK-ERAR-ADGFAVA----E--SKDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHH-HTTCEEC----S--SHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHH-hcCceEe----C--CHHHHHhh-----CCEEEEecc
Confidence            588999999 5999999999999999999999987643 4455 6676321    1  44445544     799998875


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      . +     .-...+..|+++..+|.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            3 1     22467788999999999874

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.02  E-value=0.022  Score=47.31  Aligned_cols=100  Identities=11%  Similarity=0.119  Sum_probs=65.8

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCC-Cee--EecCChhhHHHHHHHHCCCC
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGF-DDA--FNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~-~~v--i~~~~~~~~~~~i~~~~~~~  227 (347)
                      ...+.++++||-.|+ | .|..+..+++..| .+|++++.+++..+.+++.... ..+  +..+.. +.. ..... .+.
T Consensus        69 ~~~~~~~~~VLDlGc-G-~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~-~~~-~~~~~-~~~  143 (230)
T 1fbn_A           69 VMPIKRDSKILYLGA-S-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KPQ-EYANI-VEK  143 (230)
T ss_dssp             CCCCCTTCEEEEESC-C-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CGG-GGTTT-SCC
T ss_pred             ccCCCCCCEEEEEcc-c-CCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCC-Ccc-ccccc-Ccc
Confidence            346778999999994 4 4888999999886 5999999999887777633221 111  111111 100 00011 136


Q ss_pred             ccEEEECCCch-----hHHHHHHhhccCCEEEEE
Q 019042          228 IDIYFENVGGK-----MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       228 ~d~vid~~g~~-----~~~~~~~~l~~~G~~v~~  256 (347)
                      +|+|+......     .+..+.+.|+++|+++..
T Consensus       144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          144 VDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            99998654432     478888899999999886

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.02  E-value=0.046  Score=46.81  Aligned_cols=89  Identities=11%  Similarity=0.079  Sum_probs=61.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|.|+| .|.+|.+.++.++..|.  +|++.++++++.+.++ ++|...... .   +..+.+.    ..+|+||.|+..
T Consensus         3 ~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~~-~---~~~~~~~----~~aDvVilavp~   72 (281)
T 2g5c_A            3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGT-T---SIAKVED----FSPDFVMLSSPV   72 (281)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEE-S---CGGGGGG----TCCSEEEECSCH
T ss_pred             EEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCccccc-C---CHHHHhc----CCCCEEEEcCCH
Confidence            689999 59999999999999998  9999999999888887 777642111 1   1111121    038999999986


Q ss_pred             hh----HHHHHHhhccCCEEEEEcc
Q 019042          238 KM----LDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       238 ~~----~~~~~~~l~~~G~~v~~g~  258 (347)
                      ..    +......++++..++.++.
T Consensus        73 ~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           73 RTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHhhCCCCcEEEECCC
Confidence            43    3333345667776666554

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=96.01  E-value=0.019  Score=49.28  Aligned_cols=60  Identities=8%  Similarity=0.072  Sum_probs=43.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|||+||+|.+|...++.+...|.+|+++++..               .|..+.+.+.+.+.+.   ++|+||.+++.
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~---~~d~vi~~a~~   66 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEI---RPHIIIHCAAY   66 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHH---CCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhc---CCCEEEECCcc
Confidence            799999999999999999988899999999721               2233322344444432   48999988874

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.00  E-value=0.029  Score=47.14  Aligned_cols=103  Identities=11%  Similarity=0.066  Sum_probs=69.1

Q ss_pred             HhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHH
Q 019042          148 GLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALK  221 (347)
Q Consensus       148 ~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~  221 (347)
                      .+.....+.++++||-.|+  |.|..+..+++..+.+|++++.++...+.+++.   .|..   .++..+-. ++.    
T Consensus        37 ~l~~l~~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~----  109 (257)
T 3f4k_A           37 AVSFINELTDDAKIADIGC--GTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD-NLP----  109 (257)
T ss_dssp             HHTTSCCCCTTCEEEEETC--TTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCS----
T ss_pred             HHHHHhcCCCCCeEEEeCC--CCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh-hCC----
Confidence            3433347788999999984  569999999999878999999999887777632   2332   11211111 110    


Q ss_pred             HHCCCCccEEEECCC-----c-hhHHHHHHhhccCCEEEEEcc
Q 019042          222 RCFPEGIDIYFENVG-----G-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       222 ~~~~~~~d~vid~~g-----~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                       ...+.+|+|+....     . ..+..+.+.|+|+|+++....
T Consensus       110 -~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          110 -FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             -SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             -CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence             11237999975432     1 367888889999999987753

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.99  E-value=0.014  Score=51.52  Aligned_cols=99  Identities=20%  Similarity=0.175  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh-----CC-CeeEecCChhhHHHHHHHHCCCC
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKF-----GF-DDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~-----g~-~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ..++.+||.+|  +|.|..+..+++..+ .+|++++.+++-.+.+++.+     |. +.-+..... |..+.+.....+.
T Consensus       118 ~~~~~~VLdIG--~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-D~~~~l~~~~~~~  194 (334)
T 1xj5_A          118 IPNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-DGVAFLKNAAEGS  194 (334)
T ss_dssp             SSCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES-CHHHHHHTSCTTC
T ss_pred             CCCCCEEEEEC--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC-CHHHHHHhccCCC
Confidence            35668999999  456888888888764 59999999999888887433     11 111111122 4444444333347


Q ss_pred             ccEEEECCC-----------chhHHHHHHhhccCCEEEEE
Q 019042          228 IDIYFENVG-----------GKMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       228 ~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  256 (347)
                      +|+|+-...           ...+..+.+.|+++|.++.-
T Consensus       195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            999985332           13577888999999999875

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.99  E-value=0.057  Score=49.70  Aligned_cols=93  Identities=14%  Similarity=0.115  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee--EecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +.+|+|+| +|++|...++.+...|++|++.+++.++.+.+.+.++....  +|..+.+++.+.+.     ++|+|+.|+
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-----~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA-----KHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT-----TSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc-----CCcEEEECC
Confidence            56899998 69999999998888899999999998876655423432111  23333212323221     499999999


Q ss_pred             Cch-hHHHHHHhhccCCEEEEE
Q 019042          236 GGK-MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       236 g~~-~~~~~~~~l~~~G~~v~~  256 (347)
                      +.. .......+++++-.++..
T Consensus        77 ~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHTCEEEES
T ss_pred             ccccchHHHHHHHhCCCeEEEe
Confidence            863 323344566666666654

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.98  E-value=0.017  Score=50.24  Aligned_cols=98  Identities=14%  Similarity=0.034  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhC-------CCeeEecCChhhHHHHHHHHCCCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFG-------FDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g-------~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      .++.+||++|+  |.|..+..+++..+ .+|++++.+++-.+.+++.+.       ... +..... |..+.+.....+.
T Consensus        94 ~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~-v~~~~~-D~~~~~~~~~~~~  169 (304)
T 3bwc_A           94 PKPERVLIIGG--GDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPR-ATVRVG-DGLAFVRQTPDNT  169 (304)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTT-EEEEES-CHHHHHHSSCTTC
T ss_pred             CCCCeEEEEcC--CCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCc-EEEEEC-cHHHHHHhccCCc
Confidence            56789999994  56888888887754 599999999988888774331       111 111111 4444333222347


Q ss_pred             ccEEEECCC-----------chhHHHHHHhhccCCEEEEEc
Q 019042          228 IDIYFENVG-----------GKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       228 ~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +|+|+....           .+.+..+.+.|+++|.++...
T Consensus       170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             EEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            999986432           235778889999999998764

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.98  E-value=0.22  Score=43.68  Aligned_cols=137  Identities=12%  Similarity=0.100  Sum_probs=75.4

Q ss_pred             EEEEEcCCChHHHHH-HHHHHHCCCEEEE-EeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLV-GQFAKLVGCYVVG-SAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a-~qla~~~G~~V~~-~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|.|+|+ |.+|... +..++..++++++ .++++++.+.+.+++|...+  +.   ++.+.+.+   ..+|+|+.|+..
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~--~~---~~~~~l~~---~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKS--VT---SVEELVGD---PDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCC--BS---CHHHHHTC---TTCCEEEECSCG
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcc--cC---CHHHHhcC---CCCCEEEEeCCh
Confidence            5889995 9999875 5444347888764 46667776655547776432  22   34333321   259999999987


Q ss_pred             h-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHH-hccceeeeeEecccccchHHHHHHHHHHHHcCCccc
Q 019042          238 K-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV-GKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       238 ~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                      . +...+..+++.+-. |.+..+-..+   ......+.... .+++.+.-..    ...+...++.+.+++++|.+-.
T Consensus        73 ~~h~~~~~~al~~Gk~-v~~ekP~~~~---~~~~~~l~~~a~~~g~~~~~~~----~~r~~p~~~~~~~~i~~g~iG~  142 (332)
T 2glx_A           73 ELHREQTLAAIRAGKH-VLCEKPLAMT---LEDAREMVVAAREAGVVLGTNH----HLRNAAAHRAMRDAIAEGRIGR  142 (332)
T ss_dssp             GGHHHHHHHHHHTTCE-EEECSSSCSS---HHHHHHHHHHHHHHTCCEEECC----CGGGSHHHHHHHHHHHTTTTSS
T ss_pred             hHhHHHHHHHHHCCCe-EEEeCCCcCC---HHHHHHHHHHHHHcCCEEEEee----hhhcCHHHHHHHHHHHcCCCCC
Confidence            4 66677777776544 4454321110   00001111111 2233322111    1223455778888888887743

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.95  E-value=0.012  Score=48.64  Aligned_cols=99  Identities=19%  Similarity=0.167  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh---C-----CCeeEecCChhhHHHHHHHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF---G-----FDDAFNYKKEPDLDAALKRC  223 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~---g-----~~~vi~~~~~~~~~~~i~~~  223 (347)
                      .+.++++||-.|+ | .|..+..+++..|  .+|++++.++...+.+++.+   +     ... +..... |.....  .
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-v~~~~~-d~~~~~--~  147 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGR-VQLVVG-DGRMGY--A  147 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSS-EEEEES-CGGGCC--G
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCc-EEEEEC-CcccCc--c
Confidence            4778999999984 3 5888888998876  59999999998877776322   2     111 111111 211100  0


Q ss_pred             CCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          224 FPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       224 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ..+.+|+|+..... ..+..+.+.|+++|+++..-.
T Consensus       148 ~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          148 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            12369999877655 467888999999999987643

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.95  E-value=0.03  Score=49.37  Aligned_cols=87  Identities=16%  Similarity=0.176  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -.|.+|.|+|. |.+|...++.++..|.+|++.+++.++ +... ++|...    .   ++.+.+.+     .|+|+.+.
T Consensus       144 l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~e~l~~-----aDiVil~v  208 (333)
T 2d0i_A          144 LYGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELKARY----M---DIDELLEK-----SDIVILAL  208 (333)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHTEEE----C---CHHHHHHH-----CSEEEECC
T ss_pred             CCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----c---CHHHHHhh-----CCEEEEcC
Confidence            35789999995 999999999999999999999988766 5455 566421    1   33333433     78888887


Q ss_pred             Cch-----hH-HHHHHhhccCCEEEEEcc
Q 019042          236 GGK-----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~-----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      ...     .+ ...+..++++ .++.++.
T Consensus       209 p~~~~t~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          209 PLTRDTYHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             CCCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred             CCChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence            642     23 2456778888 7776653

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.95  E-value=0.018  Score=51.12  Aligned_cols=89  Identities=20%  Similarity=0.221  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|...++.++..|++|++..++....+.++ +.|+..+    +  ++.+.+.+     .|+|+-+..
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~~-----aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV----E--DLNEMLPK-----CDVIVINMP  229 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC----S--CHHHHGGG-----CSEEEECSC
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc----C--CHHHHHhc-----CCEEEECCC
Confidence            588999999 599999999999999999999998765445555 6776421    1  34444432     799988876


Q ss_pred             c--h----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G--K----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~--~----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .  +    .-...+..|+++..+|.++.
T Consensus       230 lt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            3  1    22567788899988888874

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.95  E-value=0.0025  Score=55.54  Aligned_cols=95  Identities=12%  Similarity=0.064  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhCCC-eeEe----cCChhhHHHHHHHHCCCCcc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV-NLLKNKFGFD-DAFN----YKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~-~~~~~~~g~~-~vi~----~~~~~~~~~~i~~~~~~~~d  229 (347)
                      -.|.+++|.|++.-+|..+++++...|++|+++.++..+. +... .++.. +...    .+.. ++.+.+++     +|
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~-~la~~~~~~t~~~~t~~~-~L~e~l~~-----AD  247 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE-SLKLNKHHVEDLGEYSED-LLKKCSLD-----SD  247 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC-CSSCCCCEEEEEEECCHH-HHHHHHHH-----CS
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH-HHhhhcccccccccccHh-HHHHHhcc-----CC
Confidence            3689999999744679999999999999999887763221 1111 23221 1110    1112 66667765     89


Q ss_pred             EEEECCCchh--HHHHHHhhccCCEEEEEccc
Q 019042          230 IYFENVGGKM--LDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       230 ~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +||.++|...  +..  ..++++-.++.+|..
T Consensus       248 IVIsAtg~p~~vI~~--e~vk~GavVIDVgi~  277 (320)
T 1edz_A          248 VVITGVPSENYKFPT--EYIKEGAVCINFACT  277 (320)
T ss_dssp             EEEECCCCTTCCBCT--TTSCTTEEEEECSSS
T ss_pred             EEEECCCCCcceeCH--HHcCCCeEEEEcCCC
Confidence            9999999853  322  336888788888764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.93  E-value=0.068  Score=46.14  Aligned_cols=86  Identities=13%  Similarity=0.055  Sum_probs=61.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc-h
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-K  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~  238 (347)
                      +|.|+| .|.+|...+..+...|.+|++.++++++.+.+. +.|...   ..   ++.+.+..     +|+||.|+.. .
T Consensus         7 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~---~~~~~~~~-----~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---AS---TAKAIAEQ-----CDVIITMLPNSP   73 (299)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CS---SHHHHHHH-----CSEEEECCSSHH
T ss_pred             eEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cC---CHHHHHhC-----CCEEEEECCCHH
Confidence            799999 599999999888888999999999998888777 556421   11   33333432     7999999984 3


Q ss_pred             hHHHHH-------HhhccCCEEEEEcc
Q 019042          239 MLDAVL-------LNMRIHGRIAVCGM  258 (347)
Q Consensus       239 ~~~~~~-------~~l~~~G~~v~~g~  258 (347)
                      .+...+       ..++++..++.++.
T Consensus        74 ~~~~~~~~~~~l~~~l~~~~~vv~~s~  100 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPGTVLIDMSS  100 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhCcchHhhcCCCCCEEEECCC
Confidence            444443       45667777766643

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.92  E-value=0.027  Score=49.59  Aligned_cols=88  Identities=11%  Similarity=0.066  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+|. |.+|...++.++..|.+|++.+++.++.+.+. ++|...+       ++.+.+.+     .|+|+.+..
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~e~l~~-----aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-EFQAEFV-------STPELAAQ-----SDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-TTTCEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-hcCceeC-------CHHHHHhh-----CCEEEEeCC
Confidence            4789999995 99999999999999999999998765445455 5554321       23333432     799999886


Q ss_pred             ch-----hH-HHHHHhhccCCEEEEEcc
Q 019042          237 GK-----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~~-----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      ..     .+ ...+..++++..++.++.
T Consensus       220 ~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            42     22 456678888888887764

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.91  E-value=0.013  Score=52.32  Aligned_cols=89  Identities=11%  Similarity=0.074  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .|.+|.|+| .|.+|...++.++..|++ |++.+++..+.+.+. ++|+..   . .  ++.+.+.     ..|+|+.+.
T Consensus       163 ~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~---~-~--~l~ell~-----~aDvV~l~~  229 (364)
T 2j6i_A          163 EGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARR---V-E--NIEELVA-----QADIVTVNA  229 (364)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEE---C-S--SHHHHHH-----TCSEEEECC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEe---c-C--CHHHHHh-----cCCEEEECC
Confidence            688999999 599999999999999997 999997765445555 677532   1 1  3444443     279999888


Q ss_pred             Cch-----hH-HHHHHhhccCCEEEEEcc
Q 019042          236 GGK-----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~-----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      ...     .+ ...+..|++++.+|.++.
T Consensus       230 P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          230 PLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            642     22 456678888888888775

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.90  E-value=0.031  Score=49.19  Aligned_cols=35  Identities=3%  Similarity=0.005  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          158 GEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       158 ~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      +++++|+|+++  |+|.+.++.+...|++|+++++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            67899999865  999999999999999999888665

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.90  E-value=0.02  Score=48.69  Aligned_cols=102  Identities=18%  Similarity=0.209  Sum_probs=68.7

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHH
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKR  222 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~  222 (347)
                      +.....+.++++||-+|+  |.|..+..+++..|.+|++++.++...+.+++..   |..   .++..+-. ++     .
T Consensus        53 l~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~  124 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGC--GIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DL-----P  124 (273)
T ss_dssp             HHHHSCCCTTCEEEEESC--TTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----C
T ss_pred             HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cC-----C
Confidence            334567789999999984  5688889999988999999999998777776332   321   12211111 11     0


Q ss_pred             HCCCCccEEEECCC-----c--hhHHHHHHhhccCCEEEEEcc
Q 019042          223 CFPEGIDIYFENVG-----G--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       223 ~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ...+.+|+|+....     .  ..+..+.+.|+++|+++....
T Consensus       125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            11236999985322     2  367888889999999987654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=95.89  E-value=0.01  Score=49.13  Aligned_cols=77  Identities=9%  Similarity=0.096  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC----------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHH
Q 019042          157 KGEYVYVSAA----------------SGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAAL  220 (347)
Q Consensus       157 ~~~~vlI~ga----------------~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i  220 (347)
                      .|.+|||+||                +|.+|.+.++.+...|++|+.+.+.... .... ..+ ..+++.....++.+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~~~-~~~-~~~~~v~s~~em~~~v   78 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KPEP-HPN-LSIREITNTKDLLIEM   78 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CCCC-CTT-EEEEECCSHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cccC-CCC-eEEEEHhHHHHHHHHH
Confidence            5789999999                7889999999999999999999976431 1000 012 2345555433555566


Q ss_pred             HHHCCCCccEEEECCCc
Q 019042          221 KRCFPEGIDIYFENVGG  237 (347)
Q Consensus       221 ~~~~~~~~d~vid~~g~  237 (347)
                      .+.. +++|++|.+++-
T Consensus        79 ~~~~-~~~Dili~aAAv   94 (232)
T 2gk4_A           79 QERV-QDYQVLIHSMAV   94 (232)
T ss_dssp             HHHG-GGCSEEEECSBC
T ss_pred             HHhc-CCCCEEEEcCcc
Confidence            5544 359999998874

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.89  E-value=0.048  Score=46.22  Aligned_cols=106  Identities=14%  Similarity=0.094  Sum_probs=68.2

Q ss_pred             HhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC
Q 019042          148 GLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       148 ~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      .+.....+.++.+||-+|+  |.|..+..+++..+++|++++.++...+.+++.   .|...-+..... |+.+ + ...
T Consensus        37 ~l~~l~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~-~~~  111 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIGC--GTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVG-SMDD-L-PFR  111 (267)
T ss_dssp             HHTTCCCCCTTCEEEEETC--TTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-CCC
T ss_pred             HHHhcccCCCCCEEEEeCC--CCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEc-Chhh-C-CCC
Confidence            3433335788999999994  568889999988566999999999877777633   233210111111 1110 0 011


Q ss_pred             CCCccEEEECCCc------hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGG------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+|+|+....-      ..+..+.+.|+++|+++....
T Consensus       112 ~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          112 NEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             CCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            2379999864432      357788889999999987654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.88  E-value=0.067  Score=47.32  Aligned_cols=75  Identities=9%  Similarity=0.071  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhC----C-Cee--EecCChhhHHHHHHHHCCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----EKVNLLKNKFG----F-DDA--FNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~----~~~~~~~~~~g----~-~~v--i~~~~~~~~~~~i~~~~~~  226 (347)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.    ++.+.+.+.+.    . ...  .|..+.    +.+.+... 
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~-  101 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL----DDCNNACA-  101 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH----HHHHHHHT-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH----HHHHHHhc-
Confidence            46899999999999999999988999999999854    23333331221    1 122  233332    22322222 


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|+||.+++.
T Consensus       102 ~~d~vih~A~~  112 (352)
T 1sb8_A          102 GVDYVLHQAAL  112 (352)
T ss_dssp             TCSEEEECCSC
T ss_pred             CCCEEEECCcc
Confidence            59999999883

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=95.83  E-value=0.017  Score=51.62  Aligned_cols=74  Identities=12%  Similarity=0.153  Sum_probs=44.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHh-------CCC-e--eEecCChhhHHHHHHHHCCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV--NLLKNKF-------GFD-D--AFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~--~~~~~~~-------g~~-~--vi~~~~~~~~~~~i~~~~~~  226 (347)
                      .+|||+||+|.+|...++.+...|.+|++++++.++.  +.++ .+       +.. .  ..|..+.+++.+.+...   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVD-HIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHH-HHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            5799999999999999999988999999999876531  2222 21       111 1  12333332333334332   


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|+||.+++
T Consensus        78 ~~d~vih~A~   87 (372)
T 1db3_A           78 QPDEVYNLGA   87 (372)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCc
Confidence            4899999987

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.83  E-value=0.025  Score=48.66  Aligned_cols=98  Identities=15%  Similarity=0.152  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCC------CeeEecCChhhHHHHHHHHCCCCc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGF------DDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      .++++||+.|  +|.|..+..+++.. +.+|++++.+++-.+.+++.+..      +.-+..... |..+.+... .+.+
T Consensus        77 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~~-~~~f  152 (283)
T 2i7c_A           77 KEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLENV-TNTY  152 (283)
T ss_dssp             SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHHC-CSCE
T ss_pred             CCCCeEEEEe--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC-ChHHHHHhC-CCCc
Confidence            4568999999  45677788888775 45999999999988888855532      111111111 444444332 3479


Q ss_pred             cEEEECCC-----------chhHHHHHHhhccCCEEEEEc
Q 019042          229 DIYFENVG-----------GKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       229 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      |+|+-...           .+.+..+.++|+++|.++...
T Consensus       153 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          153 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             EEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            99875221           135678888999999998764

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.83  E-value=0.033  Score=49.66  Aligned_cols=86  Identities=13%  Similarity=0.156  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|...++.++..|++|++.+++... +.+. ..|+..    .   ++.+.+.+     .|+|+-+..
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~~-----aDvV~l~~P  239 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWLPR-SMLE-ENGVEP----A---SLEDVLTK-----SDFIFVVAA  239 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHH-HTTCEE----C---CHHHHHHS-----CSEEEECSC
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCCCH-HHHh-hcCeee----C---CHHHHHhc-----CCEEEEcCc
Confidence            488999999 5999999999999999999999987533 4444 566531    1   34444443     799988765


Q ss_pred             ch------hHHHHHHhhccCCEEEEEc
Q 019042          237 GK------MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       237 ~~------~~~~~~~~l~~~G~~v~~g  257 (347)
                      ..      .-...+..|+++..+|.++
T Consensus       240 lt~~T~~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          240 VTSENKRFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             SSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred             CCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence            31      2256778899999998887

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.82  E-value=0.059  Score=43.68  Aligned_cols=94  Identities=13%  Similarity=0.096  Sum_probs=61.9

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC---------------C--eeE--ecCCh
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF---------------D--DAF--NYKKE  213 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~---------------~--~vi--~~~~~  213 (347)
                      ..+.++.+||-.|.  |.|..+..+++. |++|++++.+++-.+.+++..+.               .  ..+  |..+.
T Consensus        18 l~~~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l   94 (203)
T 1pjz_A           18 LNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   94 (203)
T ss_dssp             HCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             cccCCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence            45678899999984  567778888876 89999999999988888754331               1  111  21111


Q ss_pred             hhHHHHHHHHCCCCccEEEECCCc---------hhHHHHHHhhccCCEEEEE
Q 019042          214 PDLDAALKRCFPEGIDIYFENVGG---------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       214 ~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~  256 (347)
                       .+.. .     +.||+|++...-         ..+....+.|+|+|+++.+
T Consensus        95 -~~~~-~-----~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           95 -TARD-I-----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             -THHH-H-----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             -Cccc-C-----CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence             1111 0     249999974321         1467788899999994433

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.82  E-value=0.031  Score=47.45  Aligned_cols=98  Identities=12%  Similarity=0.189  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLV---GCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~---G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      .+++|.+||=+|.  |.|..+..+++..   |++|++++.+++-.+.+++.+   +...-+..... |+    .++..+.
T Consensus        67 ~~~~~~~vLDlGc--GtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D~----~~~~~~~  139 (261)
T 4gek_A           67 FVQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DI----RDIAIEN  139 (261)
T ss_dssp             HCCTTCEEEEETC--TTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CT----TTCCCCS
T ss_pred             hCCCCCEEEEEeC--CCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-cc----ccccccc
Confidence            4789999999994  5788888888864   679999999998887777443   32211221111 21    1122236


Q ss_pred             ccEEEECCCc---------hhHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGG---------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+|+.+..-         ..+....+.|+|||+++....
T Consensus       140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            8888764331         257788899999999987644

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.82  E-value=0.0053  Score=52.33  Aligned_cols=71  Identities=13%  Similarity=0.037  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +++|+|+||+|++|..+++.+...|++|+++++++.+..    ..+.. ...|..+. +   .+.++.. ++|++|.+.|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~-~---~~~~~~~-~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADA-N---AVNAMVA-GCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCH-H---HHHHHHT-TCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCH-H---HHHHHHc-CCCEEEECCC
Confidence            458999999999999999999989999999998865422    11111 12344443 2   2222222 5999999987


Q ss_pred             c
Q 019042          237 G  237 (347)
Q Consensus       237 ~  237 (347)
                      .
T Consensus        74 ~   74 (267)
T 3rft_A           74 I   74 (267)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.82  E-value=0.12  Score=42.23  Aligned_cols=76  Identities=9%  Similarity=-0.051  Sum_probs=54.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchh
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM  239 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  239 (347)
                      +|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.+.++.. ++..+.. + .+.+.+..-.++|+++-+.+...
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~-~-~~~l~~a~i~~ad~vi~~~~~d~   77 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGS-H-KEILRDAEVSKNDVVVILTPRDE   77 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTT-S-HHHHHHHTCCTTCEEEECCSCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCC-C-HHHHHhcCcccCCEEEEecCCcH
Confidence            4899996 99999999999999999999999999888766355653 3332221 1 22344432236999999998753

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.82  E-value=0.012  Score=48.90  Aligned_cols=98  Identities=12%  Similarity=0.138  Sum_probs=65.2

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHH-HH
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALK-RC  223 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~-~~  223 (347)
                      .....++.+||=.|  .|.|..++.+++.. +.+|++++.+++..+.+++.   .|..   .++..    |..+.+. .+
T Consensus        66 ~~~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~----d~~~~~~~~~  139 (232)
T 3ntv_A           66 LIRMNNVKNILEIG--TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG----NALEQFENVN  139 (232)
T ss_dssp             HHHHHTCCEEEEEC--CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES----CGGGCHHHHT
T ss_pred             HHhhcCCCEEEEEe--CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC----CHHHHHHhhc
Confidence            34456788999998  46788888888854 67999999999887777643   3432   22222    2222222 22


Q ss_pred             CCCCccEEEECCCch----hHHHHHHhhccCCEEEEE
Q 019042          224 FPEGIDIYFENVGGK----MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       224 ~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~  256 (347)
                       .+.||+|+-.....    .+..+.+.|+++|.++.-
T Consensus       140 -~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          140 -DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             -TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             -cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence             34699997544322    567778899999999864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.82  E-value=0.011  Score=52.31  Aligned_cols=70  Identities=17%  Similarity=0.170  Sum_probs=47.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      .++.+|||+||+|.+|..+++.+...|.+|++++++..+       .+... ..|..+.+.+.+.+.     ++|+||.+
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~   84 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIM-----GVSAVLHL   84 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHT-----TCSEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHh-----CCCEEEEC
Confidence            346789999999999999999999999999999987653       12221 234444312333332     59999998


Q ss_pred             CCc
Q 019042          235 VGG  237 (347)
Q Consensus       235 ~g~  237 (347)
                      ++.
T Consensus        85 A~~   87 (347)
T 4id9_A           85 GAF   87 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            863

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.80  E-value=0.12  Score=46.63  Aligned_cols=110  Identities=17%  Similarity=0.202  Sum_probs=71.8

Q ss_pred             chhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----------HhCC--Ce-
Q 019042          141 PGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKN----------KFGF--DD-  206 (347)
Q Consensus       141 ~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~----------~~g~--~~-  206 (347)
                      .....+..+.....+.++++|+=+|  .|.|..++++|+..|+ +|++++.++.-.+.+++          .+|.  .. 
T Consensus       157 t~~~~i~~il~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV  234 (438)
T 3uwp_A          157 TSFDLVAQMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY  234 (438)
T ss_dssp             THHHHHHHHHHHHCCCTTCEEEEES--CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred             CCHHHHHHHHHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence            3344445555667899999999998  5789999999998888 59999999865444441          2343  22 


Q ss_pred             -eEecC--ChhhHHHHHHHHCCCCccEEEECC---Cc---hhHHHHHHhhccCCEEEEEcc
Q 019042          207 -AFNYK--KEPDLDAALKRCFPEGIDIYFENV---GG---KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       207 -vi~~~--~~~~~~~~i~~~~~~~~d~vid~~---g~---~~~~~~~~~l~~~G~~v~~g~  258 (347)
                       ++..+  +. ++...+.     .+|+|+-..   ..   ..+....+.|++||++|+...
T Consensus       235 efi~GD~~~l-p~~d~~~-----~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~  289 (438)
T 3uwp_A          235 TLERGDFLSE-EWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP  289 (438)
T ss_dssp             EEEECCTTSH-HHHHHHH-----TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred             EEEECcccCC-ccccccC-----CccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence             22211  11 2222111     389998532   11   256667789999999998754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.80  E-value=0.018  Score=50.19  Aligned_cols=35  Identities=17%  Similarity=0.114  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SK  192 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~  192 (347)
                      |++|||+||+|.+|...++.+...|.+|+++.+ +.
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            468999999999999999999899999999887 54

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.80  E-value=0.0089  Score=53.77  Aligned_cols=73  Identities=18%  Similarity=0.179  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +.+|||+||+|.+|...++.+...|.+|++++++..+..... ..+... ..|..+.+++.+.+     .++|+||.+++
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~-----~~~d~Vih~A~  102 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVT-----EGVDHVFNLAA  102 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHH-----TTCSEEEECCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHh-----CCCCEEEECce
Confidence            468999999999999999999889999999998765422111 112221 13333331232222     25999999987

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.79  E-value=0.41  Score=42.38  Aligned_cols=138  Identities=8%  Similarity=-0.038  Sum_probs=80.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCEEEE-EeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLV--GCYVVG-SAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~--G~~V~~-~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -+|.|+|. |.+|...+..++..  ++++++ .++++++.+.+.+++|. .+  +.   ++.+.+.+   ..+|+|+-|+
T Consensus        14 ~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~--~~---~~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RG--HA---SLTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EE--ES---CHHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ce--eC---CHHHHhcC---CCCCEEEECC
Confidence            37999995 99998777777765  778764 45667776666547886 33  22   44445543   2599999999


Q ss_pred             Cch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHH-HhccceeeeeEecccccchHHHHHHHHHHHHcCCccc
Q 019042          236 GGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQV-VGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       236 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                      ... +...+..+++.+-+ |.+..+-..+   ......+... -.++..+.-.    +...+...++.+.+++++|.+-.
T Consensus        84 p~~~h~~~~~~al~~gk~-v~~EKP~a~~---~~~~~~l~~~a~~~g~~~~v~----~~~r~~p~~~~~k~~i~~g~iG~  155 (354)
T 3q2i_A           84 PSGLHPTQSIECSEAGFH-VMTEKPMATR---WEDGLEMVKAADKAKKHLFVV----KQNRRNATLQLLKRAMQEKRFGR  155 (354)
T ss_dssp             CGGGHHHHHHHHHHTTCE-EEECSSSCSS---HHHHHHHHHHHHHHTCCEEEC----CGGGGSHHHHHHHHHHHTTTTCS
T ss_pred             CcHHHHHHHHHHHHCCCC-EEEeCCCcCC---HHHHHHHHHHHHHhCCeEEEE----EcccCCHHHHHHHHHHhcCCCCc
Confidence            874 66777777777655 4454421110   0001111111 1223332211    12233456888889999988754


Q ss_pred             c
Q 019042          314 V  314 (347)
Q Consensus       314 ~  314 (347)
                      .
T Consensus       156 i  156 (354)
T 3q2i_A          156 I  156 (354)
T ss_dssp             E
T ss_pred             e
Confidence            4

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.79  E-value=0.019  Score=48.78  Aligned_cols=96  Identities=20%  Similarity=0.096  Sum_probs=64.3

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      +||+...+...+.+...--.|.+++|.|++.-+|..+++++...  |++|+++.+..                    . +
T Consensus       138 ~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------------~-~  196 (281)
T 2c2x_A          138 LPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------------R-D  196 (281)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------------S-C
T ss_pred             CCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------------h-H
Confidence            44444444444444322347899999998556899999999999  89998875332                    1 4


Q ss_pred             HHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.+.+++     +|++|-++|...+ ---+.++++-.++.+|...
T Consensus       197 L~~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          197 LPALTRQ-----ADIVVAAVGVAHL-LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             HHHHHTT-----CSEEEECSCCTTC-BCGGGSCTTCEEEECCEEE
T ss_pred             HHHHHhh-----CCEEEECCCCCcc-cCHHHcCCCcEEEEccCCC
Confidence            4444433     8999999997533 2223578888888888753

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=95.77  E-value=0.04  Score=58.74  Aligned_cols=80  Identities=23%  Similarity=0.256  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCh-HHHHHHHHHHHCCCEEEEE-eCCHHHHHHHH----HHh---CCC-e--eEecCChhhHHHHHHHHC
Q 019042          157 KGEYVYVSAASGA-VGQLVGQFAKLVGCYVVGS-AGSKEKVNLLK----NKF---GFD-D--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~-vG~~a~qla~~~G~~V~~~-~~~~~~~~~~~----~~~---g~~-~--vi~~~~~~~~~~~i~~~~  224 (347)
                      .|+++||+||+++ +|.+.++.+...|++|+++ .++.++.+.+.    +++   |.. .  ..|..+.+++...+.+..
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~  753 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  753 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            5789999999998 9999999999999999998 45555443221    133   332 1  234444434444444332


Q ss_pred             C-------C-CccEEEECCC
Q 019042          225 P-------E-GIDIYFENVG  236 (347)
Q Consensus       225 ~-------~-~~d~vid~~g  236 (347)
                      .       + .+|++|.++|
T Consensus       754 ~~~~~~G~G~~LDiLVNNAG  773 (1887)
T 2uv8_A          754 DTEKNGGLGWDLDAIIPFAA  773 (1887)
T ss_dssp             SCTTTTSCCCCCSEEEECCC
T ss_pred             HhccccccCCCCeEEEECCC
Confidence            1       2 6999999987

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.76  E-value=0.039  Score=48.99  Aligned_cols=90  Identities=19%  Similarity=0.194  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~-~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      -.|.+|.|+| .|.+|...++.++ ..|.+|++.+++.++.+.+. ++|...+    .  ++.+.+.+     .|+|+.+
T Consensus       161 l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~~-----aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEK-ALGAERV----D--SLEELARR-----SDCVSVS  227 (348)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHTCEEC----S--SHHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh-hcCcEEe----C--CHHHHhcc-----CCEEEEe
Confidence            3578999999 5999999999999 99999999998765555555 6665421    1  33344443     7999888


Q ss_pred             CCc-h----hH-HHHHHhhccCCEEEEEcc
Q 019042          235 VGG-K----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       235 ~g~-~----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      ... .    .+ ...+..++++..++.++.
T Consensus       228 vp~~~~t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence            764 1    22 356677888888877665

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.75  E-value=0.043  Score=48.06  Aligned_cols=89  Identities=10%  Similarity=0.044  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      -.|.+|.|+| .|.+|...++.++..|++|++.++ +.++ ..+. ++|+..    .+  ++.+.+.+     .|+|+-+
T Consensus       144 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~g~~~----~~--~l~ell~~-----aDvVil~  209 (320)
T 1gdh_A          144 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEA-SYQATF----HD--SLDSLLSV-----SQFFSLN  209 (320)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHH-HHTCEE----CS--SHHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhh-hcCcEE----cC--CHHHHHhh-----CCEEEEe
Confidence            3578999999 599999999999999999999998 7665 3455 677632    11  33344433     7999988


Q ss_pred             CCc-h----hH-HHHHHhhccCCEEEEEcc
Q 019042          235 VGG-K----ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       235 ~g~-~----~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      ... +    .+ ...+..++++..++.++.
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            863 1    22 446678899988888875

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=95.74  E-value=0.0043  Score=54.19  Aligned_cols=36  Identities=11%  Similarity=0.115  Sum_probs=32.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      +.+|||+||+|.+|...++.+...|.+|++++++..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            578999999999999999999999999999998754

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.74  E-value=0.032  Score=46.41  Aligned_cols=103  Identities=16%  Similarity=0.210  Sum_probs=66.6

Q ss_pred             HhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC
Q 019042          148 GLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       148 ~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      .+.......++.+||-+|+  |.|..+..+++. |. +|++++.+++..+.+++...... +..... ++.+ + ....+
T Consensus        34 ~l~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~-d~~~-~-~~~~~  106 (243)
T 3bkw_A           34 ALRAMLPEVGGLRIVDLGC--GFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTG-ITYERA-DLDK-L-HLPQD  106 (243)
T ss_dssp             HHHHHSCCCTTCEEEEETC--TTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSS-EEEEEC-CGGG-C-CCCTT
T ss_pred             HHHHhccccCCCEEEEEcC--cCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCC-ceEEEc-Chhh-c-cCCCC
Confidence            3444456668899999984  457777777776 77 99999999998888883332211 111111 2111 0 01123


Q ss_pred             CccEEEECCCc-------hhHHHHHHhhccCCEEEEEc
Q 019042          227 GIDIYFENVGG-------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       227 ~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+|+|+....-       ..+..+.+.|+++|+++...
T Consensus       107 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          107 SFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            69999875431       26788889999999998754

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.74  E-value=0.03  Score=47.99  Aligned_cols=94  Identities=11%  Similarity=0.032  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh-----CC--C--eeEecCChhhHHHHHHHHCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKF-----GF--D--DAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~-----g~--~--~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      .+.+||++|+  |.|..+..+++..+ .+|+++.-+++-.+.+++.+     +.  .  .++..    |..+.+.. ..+
T Consensus        75 ~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~----D~~~~l~~-~~~  147 (275)
T 1iy9_A           75 NPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD----DGFMHIAK-SEN  147 (275)
T ss_dssp             SCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES----CSHHHHHT-CCS
T ss_pred             CCCEEEEECC--chHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC----cHHHHHhh-CCC
Confidence            4679999994  56777888888766 59999999999888887444     22  1  22222    32233332 234


Q ss_pred             CccEEEECCC-----------chhHHHHHHhhccCCEEEEEc
Q 019042          227 GIDIYFENVG-----------GKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       227 ~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+|+|+-...           .+.+..+.+.|+++|.++.-.
T Consensus       148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            7999886442           236788899999999998763

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=95.73  E-value=0.043  Score=49.54  Aligned_cols=40  Identities=15%  Similarity=0.036  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      ..+.+.+|||+||+|.+|..++..+...|.+|+++++...
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~   46 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR   46 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            3456889999999999999999988889999999987643

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.73  E-value=0.0059  Score=51.33  Aligned_cols=102  Identities=10%  Similarity=0.032  Sum_probs=64.1

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHC---
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCF---  224 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~---  224 (347)
                      ....++.+||=+|+  +.|..++.+|+..  +.+|++++.+++..+.+++   ..|...-+..... |..+.+..+.   
T Consensus        56 ~~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~~~~~~  132 (242)
T 3r3h_A           56 IRLTRAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG-PALDTLHSLLNEG  132 (242)
T ss_dssp             HHHHTCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES-CHHHHHHHHHHHH
T ss_pred             HhhcCcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHhhcc
Confidence            34456789999984  5688888899876  5799999988764333321   4455311222111 3333333321   


Q ss_pred             -CCCccEEEECCCch----hHHHHHHhhccCCEEEEEc
Q 019042          225 -PEGIDIYFENVGGK----MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       225 -~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g  257 (347)
                       .+.||+||-.....    .+..+.+.|++||.++.-.
T Consensus       133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          133 GEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             CSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence             24699987544332    5778889999999998643

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.72  E-value=0.48  Score=41.46  Aligned_cols=135  Identities=14%  Similarity=0.165  Sum_probs=79.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEE-EeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVG-SAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~-~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|.|+|. |.+|...+..++.. ++++++ .++++++.+.+.+.+|..    +.   ++.+.+.+   ..+|+|+.|+..
T Consensus         5 ~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~---~~~~~l~~---~~~D~V~i~tp~   73 (331)
T 4hkt_A            5 RFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VR---TIDAIEAA---ADIDAVVICTPT   73 (331)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----EC---CHHHHHHC---TTCCEEEECSCG
T ss_pred             EEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cC---CHHHHhcC---CCCCEEEEeCCc
Confidence            6899995 99998888777765 778775 556677766655477764    32   44444442   259999999987


Q ss_pred             -hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHH-HhccceeeeeEecccccchHHHHHHHHHHHHcCCccc
Q 019042          238 -KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQV-VGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       238 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                       .+...+..+++.+-+ |.+..+-..+   ......+... -.++..+.-..    ...+...++.+.+++++|.+-.
T Consensus        74 ~~h~~~~~~al~~gk~-v~~EKP~~~~---~~~~~~l~~~a~~~g~~~~v~~----~~r~~p~~~~~~~~i~~g~iG~  143 (331)
T 4hkt_A           74 DTHADLIERFARAGKA-IFCEKPIDLD---AERVRACLKVVSDTKAKLMVGF----NRRFDPHFMAVRKAIDDGRIGE  143 (331)
T ss_dssp             GGHHHHHHHHHHTTCE-EEECSCSCSS---HHHHHHHHHHHHHTTCCEEECC----GGGGCHHHHHHHHHHHTTTTCS
T ss_pred             hhHHHHHHHHHHcCCc-EEEecCCCCC---HHHHHHHHHHHHHcCCeEEEcc----cccCCHHHHHHHHHHHcCCCCc
Confidence             467777777777655 4454431110   0001111111 12333332111    2233456788888899887743

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=95.71  E-value=0.087  Score=47.53  Aligned_cols=97  Identities=14%  Similarity=0.143  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +++|++||=.|+  +.|..++.+++. |++|++++.++...+.+++.+   |....+.  .. |..+.+....+ .+|+|
T Consensus       212 ~~~g~~VLDlg~--GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~--~~-D~~~~l~~~~~-~fD~I  284 (393)
T 4dmg_A          212 VRPGERVLDVYS--YVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIR--HG-EALPTLRGLEG-PFHHV  284 (393)
T ss_dssp             CCTTCEEEEESC--TTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEE--ES-CHHHHHHTCCC-CEEEE
T ss_pred             hcCCCeEEEccc--chhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEE--Ec-cHHHHHHHhcC-CCCEE
Confidence            346999988874  567777777774 888999999999888776432   4432222  22 55454544433 49999


Q ss_pred             EECCCc----------------hhHHHHHHhhccCCEEEEEcc
Q 019042          232 FENVGG----------------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       232 id~~g~----------------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +-....                ..+..+.++|+++|.++.+..
T Consensus       285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~  327 (393)
T 4dmg_A          285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC  327 (393)
T ss_dssp             EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence            864332                356778899999999986655

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.71  E-value=0.05  Score=45.86  Aligned_cols=101  Identities=16%  Similarity=0.233  Sum_probs=66.0

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ......++.+||-.|+  |.|..+..+++.. .+|++++.+++..+.+++.+   |...+ ..... |+.+ + .+.++.
T Consensus        31 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v-~~~~~-d~~~-l-~~~~~~  103 (260)
T 1vl5_A           31 QIAALKGNEEVLDVAT--GGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQV-EYVQG-DAEQ-M-PFTDER  103 (260)
T ss_dssp             HHHTCCSCCEEEEETC--TTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEEC-CC-C-C-CSCTTC
T ss_pred             HHhCCCCCCEEEEEeC--CCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCce-EEEEe-cHHh-C-CCCCCC
Confidence            4456778999999994  4677777777764 59999999998877776332   32211 11111 1111 0 011237


Q ss_pred             ccEEEECCCc-------hhHHHHHHhhccCCEEEEEcc
Q 019042          228 IDIYFENVGG-------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       228 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+|+.+..-       ..+..+.+.|+|+|+++....
T Consensus       104 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~  141 (260)
T 1vl5_A          104 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  141 (260)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence            9999976542       367888999999999988643

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.70  E-value=0.058  Score=44.48  Aligned_cols=92  Identities=11%  Similarity=0.024  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .|.+|||.|+ |.+|...++.+...|++|++++.... .++.+. +.+.-..+.. .   +.+.  .+  .++|+||-++
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~-~~~~i~~i~~-~---~~~~--dL--~~adLVIaAT   99 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWE-AKGQLRVKRK-K---VGEE--DL--LNVFFIVVAT   99 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHH-HTTSCEEECS-C---CCGG--GS--SSCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH-HcCCcEEEEC-C---CCHh--Hh--CCCCEEEECC
Confidence            4678999996 99999999999999999999986543 333333 2232222211 1   1110  01  2599999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEcc
Q 019042          236 GGKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+..+..+...+..|..|....
T Consensus       100 ~d~~~N~~I~~~ak~gi~VNvvD  122 (223)
T 3dfz_A          100 NDQAVNKFVKQHIKNDQLVNMAS  122 (223)
T ss_dssp             CCTHHHHHHHHHSCTTCEEEC--
T ss_pred             CCHHHHHHHHHHHhCCCEEEEeC
Confidence            98777766666566888877654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=95.70  E-value=0.052  Score=46.69  Aligned_cols=63  Identities=6%  Similarity=0.075  Sum_probs=44.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|+|+||+|.+|...++.+. .|.+|++++++..       .    ...|..+.+++.+.+...   ++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------~----~~~D~~d~~~~~~~~~~~---~~d~vih~a~~   64 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------E----FCGDFSNPKGVAETVRKL---RPDVIVNAAAH   64 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------S----SCCCTTCHHHHHHHHHHH---CCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------c----ccccCCCHHHHHHHHHhc---CCCEEEECccc
Confidence            69999999999999998888 7999999997651       1    113333432344444322   48999999873

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=95.69  E-value=0.024  Score=48.10  Aligned_cols=66  Identities=17%  Similarity=0.200  Sum_probs=46.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|+|+||+|.+|...++.+.. |.+|+++++++.. +  .   +  ...|..+.+++.+.+...   ++|+||.++|.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~--~---~--~~~Dl~~~~~~~~~~~~~---~~d~vi~~a~~   67 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q--G---G--YKLDLTDFPRLEDFIIKK---RPDVIINAAAM   67 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T--T---C--EECCTTSHHHHHHHHHHH---CCSEEEECCCC
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C--C---C--ceeccCCHHHHHHHHHhc---CCCEEEECCcc
Confidence            589999999999999888874 8999999987632 1  1   2  334554442344444432   48999999874

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=95.68  E-value=0.027  Score=45.94  Aligned_cols=97  Identities=18%  Similarity=0.174  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ..++.+||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.   .+...-+..... +..+.+.. ..+ +|
T Consensus        54 ~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~-~~~-fD  128 (210)
T 3c3p_A           54 IKQPQLVVVPG--DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG-DPLGIAAG-QRD-ID  128 (210)
T ss_dssp             HHCCSEEEEES--CGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES-CHHHHHTT-CCS-EE
T ss_pred             hhCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe-cHHHHhcc-CCC-CC
Confidence            34677999998  47888999999876  57999999999887777633   233211222111 33333322 234 99


Q ss_pred             EEEECCCc----hhHHHHHHhhccCCEEEEE
Q 019042          230 IYFENVGG----KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       230 ~vid~~g~----~~~~~~~~~l~~~G~~v~~  256 (347)
                      +|+-....    ..+..+.+.|+++|.++.-
T Consensus       129 ~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  159 (210)
T 3c3p_A          129 ILFMDCDVFNGADVLERMNRCLAKNALLIAV  159 (210)
T ss_dssp             EEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             EEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence            98754322    3677888899999998864

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.68  E-value=0.08  Score=45.50  Aligned_cols=87  Identities=14%  Similarity=0.087  Sum_probs=60.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc-
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-  237 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  237 (347)
                      .+|.|+| .|.+|...++.+...|.+|++.++++++.+.+. +.|...   ..   +..+.+..     .|+||-|+.. 
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~---~~---~~~~~~~~-----aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAER---AA---TPCEVVES-----CPVTFAMLADP   68 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEE---CS---SHHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCee---cC---CHHHHHhc-----CCEEEEEcCCH
Confidence            4789999 499999999999999999999999999888877 666531   11   33344433     6888888874 


Q ss_pred             hhHHHHH-------HhhccCCEEEEEcc
Q 019042          238 KMLDAVL-------LNMRIHGRIAVCGM  258 (347)
Q Consensus       238 ~~~~~~~-------~~l~~~G~~v~~g~  258 (347)
                      ..+...+       ..++++..++.++.
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence            3343333       45566666665543

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.68  E-value=0.024  Score=46.90  Aligned_cols=94  Identities=10%  Similarity=0.042  Sum_probs=65.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC-CCCccEEEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF-PEGIDIYFE  233 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~-~~~~d~vid  233 (347)
                      +.++.+||-.|+  |.|..+..+++. |++|++++.++...+.+++.......+..+-    .+.+. .. .+.+|+|+.
T Consensus        46 ~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~----~~~~~-~~~~~~fD~v~~  117 (226)
T 3m33_A           46 LTPQTRVLEAGC--GHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNG----KGELP-AGLGAPFGLIVS  117 (226)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCS----CSSCC-TTCCCCEEEEEE
T ss_pred             CCCCCeEEEeCC--CCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcch----hhccC-CcCCCCEEEEEe
Confidence            467889999984  457788888877 8899999999998888884422222222211    00000 11 236999998


Q ss_pred             CCCc-hhHHHHHHhhccCCEEEEE
Q 019042          234 NVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       234 ~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      .... ..+..+.+.|+++|+++..
T Consensus       118 ~~~~~~~l~~~~~~LkpgG~l~~~  141 (226)
T 3m33_A          118 RRGPTSVILRLPELAAPDAHFLYV  141 (226)
T ss_dssp             ESCCSGGGGGHHHHEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHcCCCcEEEEe
Confidence            7544 5788999999999999944

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.67  E-value=0.0083  Score=53.41  Aligned_cols=74  Identities=16%  Similarity=0.206  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhC-CCeeEecCChhhHHHHHHHHCC----CCccEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFG-FDDAFNYKKEPDLDAALKRCFP----EGIDIY  231 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~i~~~~~----~~~d~v  231 (347)
                      +.+|||+||+|.+|..+++.+...| .+|+++.++..... .. .+. .....|..+. +   .+.++..    +++|+|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~~~~~~~~d~~~~-~---~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDLNIADYMDKE-D---FLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GTTTSCCSEEEEHH-H---HHHHHHTTCCCSSCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cccCceEeeecCcH-H---HHHHHHhhcccCCCCEE
Confidence            4679999999999999999998899 89999988754321 11 221 1111233322 2   2222222    269999


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      |.+++.
T Consensus       120 ih~A~~  125 (357)
T 2x6t_A          120 FHEGAC  125 (357)
T ss_dssp             EECCSC
T ss_pred             EECCcc
Confidence            999873

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=95.65  E-value=0.05  Score=57.97  Aligned_cols=80  Identities=18%  Similarity=0.199  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCCh-HHHHHHHHHHHCCCEEEEEe-CCHHHHH----HHHHHh---CCC-e--eEecCChhhHHHHHHHHC
Q 019042          157 KGEYVYVSAASGA-VGQLVGQFAKLVGCYVVGSA-GSKEKVN----LLKNKF---GFD-D--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~-vG~~a~qla~~~G~~V~~~~-~~~~~~~----~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~  224 (347)
                      .|+++||+||+++ +|.+.+..+...|++|+++. ++.++.+    .+.+++   |.. .  ..|..+.+++.+.+.+..
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            5789999999998 99999999999999999985 5444432    221144   332 1  234444434444444432


Q ss_pred             C-----C-CccEEEECCC
Q 019042          225 P-----E-GIDIYFENVG  236 (347)
Q Consensus       225 ~-----~-~~d~vid~~g  236 (347)
                      .     + .+|++|.++|
T Consensus       731 ~~~~~~G~~IDiLVnNAG  748 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAA  748 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCC
T ss_pred             HhhcccCCCCcEEEeCcc
Confidence            2     3 5999999987

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.65  E-value=0.0089  Score=52.68  Aligned_cols=100  Identities=13%  Similarity=0.077  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV-NLLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~-~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ++.+|||+||+|.+|..+++.+...|.+|++++++.... +.+. .+.-..  ..|..+.+.+.+.+..   ..+|+||.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-DHPNLTFVEGSIADHALVNQLIGD---LQPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-CCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-hcCCceEEEEeCCCHHHHHHHHhc---cCCcEEEE
Confidence            356899999999999999999988999999999864321 1111 111111  1244443233333332   15899999


Q ss_pred             CCCch-h--------------HHHHHHhhcc-C-CEEEEEcccc
Q 019042          234 NVGGK-M--------------LDAVLLNMRI-H-GRIAVCGMIS  260 (347)
Q Consensus       234 ~~g~~-~--------------~~~~~~~l~~-~-G~~v~~g~~~  260 (347)
                      +++.. .              ....++.+.+ + +++|.+++..
T Consensus        96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~  139 (333)
T 2q1w_A           96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL  139 (333)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred             CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence            98742 1              1223333333 3 6899887644

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.63  E-value=0.025  Score=50.90  Aligned_cols=89  Identities=13%  Similarity=0.019  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|...++.++..|.+|++.+++..+.+..+ ++|+...   .   ++.+.+.     ..|+|+-+..
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~~~---~---~l~ell~-----~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH---A---TREDMYP-----VCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC---S---SHHHHGG-----GCSEEEECSC
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCceec---C---CHHHHHh-----cCCEEEEecC
Confidence            588999999 599999999999999999999988765445555 6776421   1   3333332     3788888876


Q ss_pred             c--h---hH-HHHHHhhccCCEEEEEcc
Q 019042          237 G--K---ML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~--~---~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      .  .   .+ ...+..|+++..+|.++.
T Consensus       257 lt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            3  1   23 456678888888887764

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.62  E-value=0.022  Score=49.53  Aligned_cols=99  Identities=12%  Similarity=0.169  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhC-----C-CeeEecCChhhHHHHHHHHCCCC
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFG-----F-DDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g-----~-~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      ..++.+||++|  +|.|..+..+++..+ .+|++++.+++-.+.+++.+.     . ..-+..... |..+.+.. ..+.
T Consensus        93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~-Da~~~l~~-~~~~  168 (304)
T 2o07_A           93 HPNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-NQDA  168 (304)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-CHHHHHHT-CSSC
T ss_pred             CCCCCEEEEEC--CCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-cHHHHHhh-CCCC
Confidence            34568999999  466888888888754 599999999988888874332     1 110111111 43333332 2347


Q ss_pred             ccEEEECCCc-----------hhHHHHHHhhccCCEEEEEc
Q 019042          228 IDIYFENVGG-----------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       228 ~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +|+|+-....           +.+..+.++|+++|.++.-.
T Consensus       169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          169 FDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             EEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            9999843221           35788899999999998654

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.61  E-value=0.046  Score=46.34  Aligned_cols=99  Identities=13%  Similarity=0.019  Sum_probs=65.0

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCcc
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ....+.++++||=.|+  |.|..+..+++. |++|++++.+++-.+.+++..... ...+..+. +.  .......+.+|
T Consensus        39 ~~l~l~~g~~VLDlGc--GtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~-~~--~~~~~~~~~fD  112 (261)
T 3iv6_A           39 FLENIVPGSTVAVIGA--STRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDI-TA--EIPKELAGHFD  112 (261)
T ss_dssp             HTTTCCTTCEEEEECT--TCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCT-TS--CCCGGGTTCCS
T ss_pred             HhcCCCCcCEEEEEeC--cchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeec-cc--ccccccCCCcc
Confidence            4467889999999994  678888888874 889999999999888888544332 11222221 11  00001123699


Q ss_pred             EEEECCCc---------hhHHHHHHhhccCCEEEEE
Q 019042          230 IYFENVGG---------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       230 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~  256 (347)
                      +|+.+..-         ..+....+++ |+|+++..
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            99875431         1566677788 99998754

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.61  E-value=0.047  Score=43.40  Aligned_cols=99  Identities=13%  Similarity=0.055  Sum_probs=67.1

Q ss_pred             hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC----eeEecCChhhHHHHHHH
Q 019042          150 YELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD----DAFNYKKEPDLDAALKR  222 (347)
Q Consensus       150 ~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~----~vi~~~~~~~~~~~i~~  222 (347)
                      .......++++||-.|+  |.|..+..+++. +.++++++.+++..+.+++.+   +..    .++..    ++.+.   
T Consensus        45 ~~~~~~~~~~~vLdiG~--G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~----d~~~~---  114 (194)
T 1dus_A           45 VENVVVDKDDDILDLGC--GYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS----DLYEN---  114 (194)
T ss_dssp             HHHCCCCTTCEEEEETC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC----STTTT---
T ss_pred             HHHcccCCCCeEEEeCC--CCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC----chhcc---
Confidence            34456678999999984  468888888887 889999999998877776433   332    12222    21111   


Q ss_pred             HCCCCccEEEECCC----c----hhHHHHHHhhccCCEEEEEcc
Q 019042          223 CFPEGIDIYFENVG----G----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       223 ~~~~~~d~vid~~g----~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ...+.+|+|+....    .    ..+..+.+.|+++|.++....
T Consensus       115 ~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          115 VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence            11236999987543    1    356777889999999987754

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.60  E-value=0.025  Score=49.50  Aligned_cols=98  Identities=18%  Similarity=0.152  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhC------C-CeeEecCChhhHHHHHHHHCCCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFG------F-DDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g------~-~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      .++.+||++|  +|.|..+..+++.. +.+|++++.+++-.+.+++.+.      . +.-+..... |..+.+.. ..+.
T Consensus        76 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~-~~~~  151 (314)
T 1uir_A           76 PEPKRVLIVG--GGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID-DARAYLER-TEER  151 (314)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES-CHHHHHHH-CCCC
T ss_pred             CCCCeEEEEc--CCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEc-hHHHHHHh-cCCC
Confidence            3567999999  46677888888875 4599999999988887774332      1 111111111 44333433 2347


Q ss_pred             ccEEEECCCc--------------hhHHHHHHhhccCCEEEEEc
Q 019042          228 IDIYFENVGG--------------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       228 ~d~vid~~g~--------------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +|+|+-....              +.+..+.++|+++|.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  195 (314)
T 1uir_A          152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (314)
T ss_dssp             EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence            9998753321              24788889999999998753

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.59  E-value=0.033  Score=48.85  Aligned_cols=98  Identities=14%  Similarity=0.132  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCC------CeeEecCChhhHHHHHHHHCCCCc
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGF------DDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      .++.+||..|+  |.|..+..+++.. +.+|++++.+++-.+.+++.+..      +.-+..... |..+.+.. ..+.+
T Consensus       115 ~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~-D~~~~l~~-~~~~f  190 (321)
T 2pt6_A          115 KEPKNVLVVGG--GDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLEN-VTNTY  190 (321)
T ss_dssp             SSCCEEEEEEC--TTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHH-CCSCE
T ss_pred             CCCCEEEEEcC--CccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEc-cHHHHHhh-cCCCc
Confidence            35679999994  5677888888875 46999999999988888854432      111111122 44443432 23479


Q ss_pred             cEEEECCC-----------chhHHHHHHhhccCCEEEEEc
Q 019042          229 DIYFENVG-----------GKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       229 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      |+|+-...           .+.+..+.+.|+++|.++.-.
T Consensus       191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            99984331           235678888999999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	347
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	7e-37
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	2e-34
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	1e-29
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	3e-27
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	1e-22
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-20
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	7e-20
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	8e-20
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-19
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	4e-18
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	7e-18
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	8e-18
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	2e-17
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	9e-17
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-16
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	8e-16
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	4e-15
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	2e-13
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	4e-11
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	7e-11
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	3e-10
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-10
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-09
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	2e-09
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	4e-09
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	5e-09
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	6e-09
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	5e-08
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	1e-07
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	5e-06

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  129 bits (324), Expect = 7e-37
 Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 6/186 (3%)

Query: 131 LSYYTGILGMPGLTAYGGLYELCSPKKG--EYVYVSAASGAVGQLVGQFAKLVGCYVVGS 188
           LSY+ G +GMPGLT+  G+ E      G  + + VS A+GA G L GQ   L+GC  V  
Sbjct: 2   LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61

Query: 189 AGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMR 248
               ++  L        DA    K  ++   L+   P G+D+YF+NVGG + + V+  M 
Sbjct: 62  ICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 249 IHGRIAVCGMISQYNLE----KPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMP 304
            +  I +CG ISQYN +     P           + I  E F   ++  ++   +  +  
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ 181

Query: 305 AIKEGK 310
             KEGK
Sbjct: 182 WFKEGK 187

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  122 bits (306), Expect = 2e-34
 Identities = 86/183 (46%), Positives = 113/183 (61%), Gaps = 3/183 (1%)

Query: 129 VPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS 188
           +PLS   G +GMPGLTAY GL E+C  K GE V VSAA+GAVG +VGQ AKL GC VVG+
Sbjct: 1   LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60

Query: 189 AGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMR 248
           AGS EK+  LK        FNYK    L+ ALK+  P+G D YF+NVGG+ L+ VL  M+
Sbjct: 61  AGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 119

Query: 249 IHGRIAVCGMISQYNLE-KPEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMPAI 306
             G+IA+CG IS YN   +     +   ++ K++R+EGF+   +      K L  +M  +
Sbjct: 120 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWV 179

Query: 307 KEG 309
            EG
Sbjct: 180 LEG 182

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  109 bits (273), Expect = 1e-29
 Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 7/163 (4%)

Query: 9   NKQVILSN--YVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
            ++V+L++     G P   + ++   S+   + EG    V ++ LYLS DPYMR +M++ 
Sbjct: 5   IQRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQ---VQVRTLYLSVDPYMRCKMNED 61

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILD 126
               ++A +   +   G G+  V +S H    K D V       +   I     L K+  
Sbjct: 62  TGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDP 121

Query: 127 TNVPL--SYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAAS 167
             V       T   G+  +               + V +S  S
Sbjct: 122 QLVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  102 bits (255), Expect = 3e-27
 Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 18/161 (11%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           V  K   L  +  G P +SD ++ T    +++P      VLL+ L+LS DPYMR    + 
Sbjct: 2   VKAKSWTLKKHFQGKPTQSDFELKT----VELPPLKNGEVLLEALFLSVDPYMRIASKR- 56

Query: 67  DKPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQH--LIKI 124
                      G  + G  V++V++S +  +    +V   + W  + +        L+  
Sbjct: 57  --------LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTE 108

Query: 125 LDTNVPLSYYTGILGMPGLT-AYGGLYELCSPKKGEYVYVS 164
                   +     G   +  A+  +        G+ V  +
Sbjct: 109 WPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVTA 147

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 91.6 bits (226), Expect = 1e-22
 Identities = 27/186 (14%), Positives = 57/186 (30%), Gaps = 18/186 (9%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYV-SAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
           + +  LTAY  L        G+  ++ +  + AVG+   Q  KL+    +     +  ++
Sbjct: 9   ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68

Query: 197 LL---KNKFGFDDAFNYKKE-----PDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMR 248
            +     + G        +              +       +    VGGK    +   + 
Sbjct: 69  EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLN 128

Query: 249 IHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF----LELVMP 304
            +G +   G +S   +            + K     GF   +      +     L  ++ 
Sbjct: 129 NNGLMLTYGGMSFQPVT-----IPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIA 183

Query: 305 AIKEGK 310
             +EGK
Sbjct: 184 WYEEGK 189

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 84.3 bits (207), Expect = 3e-20
 Identities = 31/177 (17%), Positives = 53/177 (29%), Gaps = 11/177 (6%)

Query: 137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
           +LG    T YG        + G    V    G    ++          ++G   +K+K  
Sbjct: 8   LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 67

Query: 197 LLKNKFGFDDAFNYKKEP-DLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAV 255
             K +FG  +  N +     +   L      G+D  FE +G   +    L     G    
Sbjct: 68  RAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 126

Query: 256 CGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ--YPKFLELVMPAIKEGK 310
             ++      +         V G+  +  G   G +      PK +   M      K
Sbjct: 127 V-VVGVAASGEEIATRPFQLVTGRTWK--GTAFGGWKSVESVPKLVSEYM----SKK 176

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 83.5 bits (205), Expect = 7e-20
 Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 4/173 (2%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
             + GLT Y  L +    K  E     AA+G VG +  Q+AK +G  ++G+ G+ +K   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
              K G     NY++E  ++   +    + + + +++VG    +  L  ++  G +   G
Sbjct: 69  AL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 127

Query: 258 MISQYNLEKPEGVHNLM-QVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEG 309
             S        G+ N    +   R  ++G++      +  +    +   I  G
Sbjct: 128 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLIASG 178

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 83.6 bits (205), Expect = 8e-20
 Identities = 31/178 (17%), Positives = 64/178 (35%), Gaps = 10/178 (5%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
            G+  LTA+  L E+     GE V + +A+G VG      AK +    + +    +    
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKRE 64

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
           + ++ G +   + +     D  L+     G+D+   ++ G+ +   +  +   GR    G
Sbjct: 65  MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 124

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYP----KFLELVMPAIKEGKL 311
               Y           +  + K                P    + L+ ++  + +GKL
Sbjct: 125 KKDVYADASLG-----LAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 177

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 82.3 bits (202), Expect = 2e-19
 Identities = 27/177 (15%), Positives = 53/177 (29%), Gaps = 11/177 (6%)

Query: 137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
           ++G    T YG   ++    +G    V    G    ++          ++G   +K+K  
Sbjct: 8   LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 67

Query: 197 LLKNKFGFDDAFNYKKEPD-LDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAV 255
             K   G  +  N +     +   L      G+D  FE +G        L+         
Sbjct: 68  KAKE-VGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS 126

Query: 256 CGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ--YPKFLELVMPAIKEGK 310
             +         + +     ++      +G + G F  +   PK +   M      K
Sbjct: 127 VIV---GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFM----AKK 176

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 78.5 bits (192), Expect = 4e-18
 Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 139 GMPGLTAYGGLYELCS---PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV 195
           G  G TA   ++ L       +   V V+ A+G VG +        G  VV S G++E  
Sbjct: 2   GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61

Query: 196 NLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAV 255
           + LK       +    +E   D  LK    +      + VGGK L ++L  ++  G +AV
Sbjct: 62  DYLKQ---LGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 118

Query: 256 CGMISQYNLEKPEGVHNLMQVVGKRIRMEGF 286
            G+     +        +   + + + + G 
Sbjct: 119 SGLTGGGEVPAT-----VYPFILRGVSLLGI 144

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 78.1 bits (191), Expect = 7e-18
 Identities = 28/177 (15%), Positives = 50/177 (28%), Gaps = 12/177 (6%)

Query: 137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
           +LG    T +G        + G    V          V          ++    + +K  
Sbjct: 8   LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67

Query: 197 LLKNKFGFDDAFNYKKEPDL-DAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAV 255
             K  FG  D  N     +     L +    G+D   E VG   +    L   + G    
Sbjct: 68  KAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVS 126

Query: 256 CGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ--YPKFLELVMPAIKEGK 310
             +      +       L+         +G + G F  +   PK ++  +    + K
Sbjct: 127 VLVGWTDLHDVATRPIQLI----AGRTWKGSMFGGFKGKDGVPKMVKAYL----DKK 175

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 77.6 bits (190), Expect = 8e-18
 Identities = 40/185 (21%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 129 VPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS 188
           VP+    G LG    T  G                  A GAVG      AK+ G  ++ +
Sbjct: 1   VPIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA 58

Query: 189 AGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNM 247
               E    L  + G     N K + D  AA+K     G++   E+ G   +L   +  +
Sbjct: 59  VDIVESRLELAKQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 248 RIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ--YPKFLELVMPA 305
            I G+IAV G        +     ++  ++     + G + G    +   P+ + L    
Sbjct: 118 GILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQ-- 171

Query: 306 IKEGK 310
             +GK
Sbjct: 172 --QGK 174

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 76.5 bits (187), Expect = 2e-17
 Identities = 39/188 (20%), Positives = 65/188 (34%), Gaps = 23/188 (12%)

Query: 137 ILGMPGLTAYGGLYELCS---PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE 193
           I+G  G TA   +  L       +   + V+ ASG VG         +G  VV  +G + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 194 KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRI 253
               LK   G        +  +     K+ +        + VG K+L  VL  M   G +
Sbjct: 68  THEYLK-SLGASRVLPRDEFAESRPLEKQVW----AGAIDTVGDKVLAKVLAQMNYGGCV 122

Query: 254 AVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY 313
           A CG+   +          +M  + + +R++G    D     P+        +       
Sbjct: 123 AACGLAGGFT-----LPTTVMPFILRNVRLQGV---DSVMTPPERRAQAWQRL------- 167

Query: 314 VEDIAEGL 321
           V D+ E  
Sbjct: 168 VADLPESF 175

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (183), Expect = 9e-17
 Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 9/173 (5%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           +G+P  TAY  L      K GE V V  ASG VG    Q A+  G  ++G+AG++E    
Sbjct: 9   IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK- 67

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
           +  + G  + FN+++   +D   K    +GIDI  E +    L   L  +   GR+ V G
Sbjct: 68  IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 127

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMPAIKEG 309
                 +       N    + K   + G         ++ ++   +   ++ G
Sbjct: 128 SRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIG 173

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 75.0 bits (183), Expect = 1e-16
 Identities = 34/170 (20%), Positives = 54/170 (31%), Gaps = 9/170 (5%)

Query: 137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
           +    G TAY    E      G+ V +  A G +G      A+ +G   V          
Sbjct: 8   MAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL 66

Query: 197 LLKNKFGFDDAFNYKK---EPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGR 252
            L  + G D   N ++   E    A +      G D   E  G  + L      +R  G 
Sbjct: 67  KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGF 126

Query: 253 IAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
            +V G+      + P        +V K    +G    D    + K + + 
Sbjct: 127 YSVAGVAVP---QDPVPFKVYEWLVLKNATFKGIWVSD-TSHFVKTVSIT 172

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 72.2 bits (176), Expect = 8e-16
 Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 17/169 (10%)

Query: 137 ILGMPGLTAYGGLYEL---CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE 193
            +G  G TA   ++ L       +   V V+ A+G VG L        G  V  S G   
Sbjct: 8   AIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 67

Query: 194 KVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRI 253
           + + L+            +E  +   ++    +      + VGG+ L  VL  MR  G +
Sbjct: 68  EHDYLRV---LGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAV 124

Query: 254 AVCGMISQYNLEKP-----------EGVHNLMQVVGKRIRMEGFLAGDF 291
           AV G+     +               G+ ++   +  R+R+   LAGD 
Sbjct: 125 AVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDL 173

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 70.4 bits (171), Expect = 4e-15
 Identities = 31/174 (17%), Positives = 66/174 (37%), Gaps = 14/174 (8%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L   G+TAY  + +                G +G +  Q  K++    V +   KE+   
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNM-RIHGRIAVC 256
           L  + G D   + +++P +   ++     G+++  + VG +        +    GR+ + 
Sbjct: 72  LAERLGADHVVDARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIV 130

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGK 310
           G   +            ++V+   +  EG L G+ Y +  + + L      +GK
Sbjct: 131 GYGGELR-------FPTIRVISSEVSFEGSLVGN-YVELHELVTLA----LQGK 172

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 65.3 bits (158), Expect = 2e-13
 Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 14/178 (7%)

Query: 137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
           ++G    T YG          G    V    G VG       K  G   +   G+ +   
Sbjct: 7   LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65

Query: 197 LLKNKFGFDDAFNYKKEPD-LDAALKRCFPEGIDIYFENVGGK--MLDAVLLNMRIHGRI 253
               + G  +  N K     +   +      G+D   E  G    M++A+       G  
Sbjct: 66  PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVT 125

Query: 254 AVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ-YPKFLELVMPAIKEGK 310
            V G+    +  +   +  L+ + G+ ++  G + G F  +   + ++  M    + K
Sbjct: 126 VVLGL---ASPNERLPLDPLLLLTGRSLK--GSVFGGFKGEEVSRLVDDYM----KKK 174

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 58.8 bits (141), Expect = 4e-11
 Identities = 32/166 (19%), Positives = 53/166 (31%), Gaps = 5/166 (3%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           +     T + G  EL   + G  V V      VG +    AKL G   +   GS+     
Sbjct: 9   ITDMMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVE 66

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM-LDAVLLNMRIHGRIAVC 256
               +G  D  NYK     D  +K    +G+D      GG   L   +  ++  G I+  
Sbjct: 67  AAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNI 126

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
                   +                 ++G L      +  +  ++V
Sbjct: 127 NYHGSG--DALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDMV 170

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 58.1 bits (139), Expect = 7e-11
 Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 15/166 (9%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L   G+T Y  L        G+ V V    G +G +  + A  +G +VV    S+ K   
Sbjct: 12  LLCAGITTYSPLRH-WQAGPGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKRE- 68

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNM-RIHGRIAVC 256
                G D+  N +   ++ A LK       D     V           + +  G + + 
Sbjct: 69  AAKALGADEVVNSRNADEMAAHLK-----SFDFILNTVAAPHNLDDFTTLLKRDGTMTLV 123

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
           G  +      P     +  ++ KR  + G + G    +  + L+  
Sbjct: 124 GAPA-----TPHKSPEVFNLIMKRRAIAGSMIGG-IPETQEMLDFC 163

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 53.8 bits (129), Expect = 3e-10
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 137 ILGMPGLTAYGGLYEL---CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE 193
           I+G  G TA   +  L       +   + V+ ASG VG         +G  VV  +G + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 194 KVNLLKN 200
               LK+
Sbjct: 68  THEYLKS 74

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 56.8 bits (136), Expect = 3e-10
 Identities = 43/195 (22%), Positives = 66/195 (33%), Gaps = 26/195 (13%)

Query: 137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
            L     T Y G         G  VYV+ A G VG      A+L+G  VV          
Sbjct: 6   CLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL 63

Query: 197 LLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG----------------KML 240
                 GF+ A      P  +          +D   + VG                  +L
Sbjct: 64  AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 123

Query: 241 DAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRM-EGFLAGDFYH--QYP- 296
           ++++   R+ G+I + G+   Y  E P  V    ++    IR   G+     +H  Q P 
Sbjct: 124 NSLMQVTRVAGKIGIPGL---YVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV 180

Query: 297 -KFLELVMPAIKEGK 310
            K+   +M AI   +
Sbjct: 181 MKYNRALMQAIMWDR 195

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 1e-09
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 11/172 (6%)

Query: 137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
           ++G    T YG   +    K G    V    G VG  V    K  G   +      +   
Sbjct: 9   LIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF 67

Query: 197 LLKNKFGFDDAFNYKKEPDLDA-ALKRCFPEGIDIYFENVGGK--MLDAVLLNMRIHGRI 253
                 G  +  + K      +  L       +   FE +G    M+DA+      +G  
Sbjct: 68  EKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTS 127

Query: 254 AVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ--YPKFLELVM 303
            V G+     +        ++   G+  +  G + G    +   PK +   +
Sbjct: 128 VVVGVPPSAKMLTY---DPMLLFTGRTWK--GCVFGGLKSRDDVPKLVTEFL 174

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 54.3 bits (129), Expect = 2e-09
 Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 16/175 (9%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
             +  LTAY  L +    + GE V V AA+GA+G    Q A+ +G  V+ +A   EK+ L
Sbjct: 9   FPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 67

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
                  + A   +          R    G       V GK ++  L  +   GR+   G
Sbjct: 68  PLALGAEEAATYAEVPE-------RAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIG 120

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLEL---VMPAIKEG 309
                           ++++ + + + GF       +     E    ++P +   
Sbjct: 121 AAEGEVAP-----IPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRE 170

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 53.2 bits (126), Expect = 4e-09
 Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 13/174 (7%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L   G+T Y  +    S    + + V  A G +G +  Q AK V    +     +E+   
Sbjct: 9   LTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE 67

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVC 256
              + G D   N   +  L    +    +    +   N   K L      +   G+  + 
Sbjct: 68  AAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMV 127

Query: 257 GMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGK 310
           G+         +  ++   +    I+  G L G+    +   + L     + GK
Sbjct: 128 GLF------GADLHYHAPLITLSEIQFVGSLVGN-QSDFLGIMRL----AEAGK 170

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 52.6 bits (125), Expect = 5e-09
 Identities = 24/178 (13%), Positives = 47/178 (26%), Gaps = 15/178 (8%)

Query: 137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVN 196
           ++G    + YG          G    V    G VG       K+ G   + +     +  
Sbjct: 8   LIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF 66

Query: 197 LLKNKFGFDDAFNYKKEPD-LDAALKRCFPEGIDIYFENV-GGKMLDAVLLNMRIHGRIA 254
                 G  D  N ++    +   +      G+D   +     + L A +    +     
Sbjct: 67  PKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSC 126

Query: 255 VCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQ--YPKFLELVMPAIKEGK 310
                    +  P     +  ++G+ I   G   G +      P  +          K
Sbjct: 127 TVVGAKVDEMTIP----TVDVILGRSIN--GTFFGGWKSVDSVPNLVSDYK----NKK 174

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.3 bits (124), Expect = 6e-09
 Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 15/174 (8%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           L   GLT Y  L        G+ V +    G +G +    +K +G      + S  K   
Sbjct: 9   LLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE- 65

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
              K G D      +E D        F   +     ++     + +   M++ GRI    
Sbjct: 66  DAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCA-SSLTDIDFNIMPKAMKVGGRIVSIS 124

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL 311
           +  Q+       + +L     K + +     G       K L  ++  + E  +
Sbjct: 125 IPEQHE------MLSLKPYGLKAVSISYSALGS-----IKELNQLLKLVSEKDI 167

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.7 bits (117), Expect = 5e-08
 Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 11/165 (6%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           +   G+T Y GL +  + + G++V +S   G +G +  Q+A+ +G +V        K+  
Sbjct: 9   ILCAGVTVYKGL-KQTNARPGQWVAISGIGG-LGHVAVQYARAMGLHVAAIDIDDAKLE- 65

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
              +          ++ D   A++R       +    V        +   R  G IA+ G
Sbjct: 66  -LARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVG 124

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELV 302
           +              +  VV K + + G + G       + L+  
Sbjct: 125 LPPGDF------PTPIFDVVLKGLHIAGSIVGT-RADLQEALDFA 162

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 48.6 bits (114), Expect = 1e-07
 Identities = 36/174 (20%), Positives = 60/174 (34%), Gaps = 15/174 (8%)

Query: 138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNL 197
           +   G+T Y  L ++   K GE+V +    G +G +  Q+AK +G  VV      EK  L
Sbjct: 9   IFCAGVTTYKAL-KVTGAKPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEK--L 64

Query: 198 LKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCG 257
              K    D      + D    +K             V      +   ++R  G   + G
Sbjct: 65  ELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVG 124

Query: 258 MISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKL 311
           +         E    +   V   I++ G + G       + L+       EGK+
Sbjct: 125 LP------PEEMPIPIFDTVLNGIKIIGSIVGT-RKDLQEALQF----AAEGKV 167

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 44.0 bits (102), Expect = 5e-06
 Identities = 17/179 (9%), Positives = 51/179 (28%), Gaps = 13/179 (7%)

Query: 7   VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKL 66
           ++ + V+ + +  G PK+  +   +    +     + + V++K L    +P    ++  +
Sbjct: 2   ITAQAVLYTQH--GEPKDV-LFTQS--FEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGV 56

Query: 67  D------KPSFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQH 120
                     F  +       +      +   ++ +  +       +     +       
Sbjct: 57  YPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALG 116

Query: 121 LIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSP-KKGEYVYVS-AASGAVGQLVGQF 177
                      +         GLT    +  L    K    +Y    A+   G+ +  +
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 175

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	347
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.96
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.95
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.94
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.93
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.93
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.93
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.93
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.93
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.92
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.91
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.91
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.91
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.91
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.91
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.91
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.9
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.9
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.9
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.9
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.88
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.88
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.88
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.87
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.86
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.84
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.83
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.56
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.38
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.33
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.3
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.28
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.27
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.25
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.19
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.16
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.16
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.15
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.14
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.13
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.13
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.12
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.11
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.1
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.08
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.06
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.02
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.98
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.97
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.96
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.95
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.95
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.92
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.91
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.91
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.91
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.9
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.89
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.89
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.88
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.88
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.87
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.87
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.86
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.85
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.85
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.84
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.84
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.84
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.77
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.76
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.74
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.73
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.71
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.69
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.67
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.65
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.63
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.63
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.62
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.61
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.58
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.55
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.53
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.51
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.46
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.44
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.4
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.39
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.38
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.33
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.33
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.32
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.3
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.27
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.26
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.25
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.25
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.21
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.17
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.13
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.13
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.12
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	97.03
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.94
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.93
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.93
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.91
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.9
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.89
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.89
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.82
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.82
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.82
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.79
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.74
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.71
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.68
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.61
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	96.6
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.58
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.58
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.53
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.52
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.5
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.47
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.44
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.41
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.29
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.28
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.28
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.26
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.23
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.22
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.2
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	96.15
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.08
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.07
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.04
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.04
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	95.96
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.92
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.88
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.87
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.84
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.71
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.68
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.67
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	95.66
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.62
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.58
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.56
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.54
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.5
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.45
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.43
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.4
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.38
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.37
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.3
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	95.28
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.21
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.18
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.17
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	95.11
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.09
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.05
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.04
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.03
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.03
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	94.92
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.7
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	94.65
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.64
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.58
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.57
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.51
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.43
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.39
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.3
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.25
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.17
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.16
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.12
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.09
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.07
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.0
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	93.97
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.9
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.85
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.84
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.83
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.83
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.82
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	93.71
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.7
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	93.69
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.67
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.59
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.55
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.53
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.46
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.46
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.39
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	93.27
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.24
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	93.2
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.15
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	93.08
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.95
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.92
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.85
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.79
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	92.6
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.58
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.56
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.53
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.51
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	92.5
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	92.44
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	92.42
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.34
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	92.33
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	92.27
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.19
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.18
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	92.07
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	92.06
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.05
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.02
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.0
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	91.88
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	91.86
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	91.64
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.61
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.5
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	91.46
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.28
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	91.26
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.25
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.13
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.13
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	91.1
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.09
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.07
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.93
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	90.86
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	90.7
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	90.6
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	90.58
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	90.55
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.53
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.43
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.4
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	90.11
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	90.1
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.07
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	89.96
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	89.96
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.88
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.81
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	89.78
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	89.74
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.7
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	89.69
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	89.65
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	89.56
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	89.52
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.47
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	89.42
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	89.41
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	89.32
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.29
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.27
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.1
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	89.01
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.81
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	88.66
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.58
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	88.56
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.53
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.5
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.39
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	88.37
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	87.99
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	87.92
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	87.87
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.8
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	87.53
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	87.51
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	87.41
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	87.3
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	87.18
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.17
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	86.88
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	86.5
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.42
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	86.28
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	86.05
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	85.96
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	85.69
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	85.65
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	85.64
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	85.58
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.46
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	85.19
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.1
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.95
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.92
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	84.89
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	84.82
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.73
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	84.42
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	84.23
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.08
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.96
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.94
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	83.73
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	83.5
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.26
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	83.22
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	82.96
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	82.62
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.59
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	82.43
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.23
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	82.2
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.02
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.22
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	81.05
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.96
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	80.54
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	80.35
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	80.21

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=8.6e-30  Score=207.55  Aligned_cols=174  Identities=21%  Similarity=0.318  Sum_probs=152.8

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      |||+++++++|||+++.+.+++++||+|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|+++.
T Consensus         2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV   80 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS
T ss_pred             chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc
Confidence            689999999999999989889999999999999999999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc-
Q 019042          214 PDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF-  291 (347)
Q Consensus       214 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-  291 (347)
                       ++.+.+++.+++ ++|++|||.|++.++.++++++++|+++.+|......     ........+.+++++.++....+ 
T Consensus        81 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          81 -DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA-----DASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT-----TCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCC-----CcccchHHHhCCcEEEEEEcccee
Confidence             999999999987 9999999999999999999999999999998765431     12233344568888888765443 


Q ss_pred             ---ccchHHHHHHHHHHHHcCCcccc
Q 019042          292 ---YHQYPKFLELVMPAIKEGKLVYV  314 (347)
Q Consensus       292 ---~~~~~~~~~~~~~~~~~g~~~~~  314 (347)
                         +..+++.++++.+++++|+++|.
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCcee
Confidence               45567889999999999999974

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.96  E-value=5.7e-29  Score=202.14  Aligned_cols=173  Identities=47%  Similarity=0.730  Sum_probs=150.0

Q ss_pred             ccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChh
Q 019042          135 TGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEP  214 (347)
Q Consensus       135 aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~  214 (347)
                      .++|.++++|||++|.+..++++||+|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++. 
T Consensus         7 l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~-   84 (182)
T d1v3va2           7 LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTV-   84 (182)
T ss_dssp             GTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSC-
T ss_pred             HHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhcccccc-
Confidence            46788999999999999999999999999999999999999999999999999999999999999 9999999999887 


Q ss_pred             hHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCC-ccccchHHHHhccceeeeeEeccc-
Q 019042          215 DLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKP-EGVHNLMQVVGKRIRMEGFLAGDF-  291 (347)
Q Consensus       215 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~-  291 (347)
                      ++.+.+.+.+.+ ++|+||||+|++.++.++++++++|+++.+|..+..+...+ ...++...++.|++++.|+...++ 
T Consensus        85 ~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~  164 (182)
T d1v3va2          85 NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQ  164 (182)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCC
T ss_pred             cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccC
Confidence            777777666655 99999999999999999999999999999997665432222 233556778899999999988777 


Q ss_pred             ccchHHHHHHHHHHHHcC
Q 019042          292 YHQYPKFLELVMPAIKEG  309 (347)
Q Consensus       292 ~~~~~~~~~~~~~~~~~g  309 (347)
                      ++..++.++++.+|+++|
T Consensus       165 ~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         165 GDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHhCc
Confidence            445567889999999876

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.7e-29  Score=200.72  Aligned_cols=163  Identities=26%  Similarity=0.326  Sum_probs=143.2

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      ++|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+++|++|+++++++++.+.++ ++|+++++|+++.
T Consensus         5 ~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~   83 (174)
T d1yb5a2           5 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV   83 (174)
T ss_dssp             HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST
T ss_pred             HHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCcccccccccc
Confidence            699999999999999988889999999999999999999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccc
Q 019042          214 PDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY  292 (347)
Q Consensus       214 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  292 (347)
                       ++.+.+++.+++ ++|++|||+|++.++.++++++++|+++.+|....       ...+...++.|++++.|+.+... 
T Consensus        84 -~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~k~~~i~g~~~~~~-  154 (174)
T d1yb5a2          84 -NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSS-  154 (174)
T ss_dssp             -THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGC-
T ss_pred             -cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC-------CCCCHHHHHHCCCEEEEEEecCC-
Confidence             999999999887 89999999999999999999999999999986432       24566778889999999876542 


Q ss_pred             cchHHHHHHHHHHHHc
Q 019042          293 HQYPKFLELVMPAIKE  308 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~  308 (347)
                        .++.++++.+++++
T Consensus       155 --~~~~~~~~~~~l~~  168 (174)
T d1yb5a2         155 --TKEEFQQYAAALQA  168 (174)
T ss_dssp             --CHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHHHH
Confidence              24556666666554

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.3e-29  Score=195.53  Aligned_cols=144  Identities=17%  Similarity=0.243  Sum_probs=125.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  |+|  ++++++. ++|.|.| ++ +||||||+++++|++|++.+.|.+.....+|.++|||++  |+|+
T Consensus         3 MkAv~~~~~--G~p--~~l~~~~-~~~~P~~-~~-~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~--G~V~   73 (150)
T d1yb5a1           3 MRAVRVFEF--GGP--EVLKLRS-DIAVPIP-KD-HQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVA--GVIE   73 (150)
T ss_dssp             EEEEEESSC--SSG--GGEEEEE-EEECCCC-CT-TEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEE--EEEE
T ss_pred             eeEEEEEcc--CCc--ceEEEEe-ecCCCCC-CC-CeEEEEEEEecCcccchhhhcCCcCccccccccCcccee--eeeE
Confidence            599999999  888  4566543 4677766 77 999999999999999999998877666678999999955  5999


Q ss_pred             EecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042           89 VLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                      ++|+++++|++||||++.    |+|+||++++++. ++++ |++++.. ++|+++..++|||+++...+...+|+++||+
T Consensus        74 ~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          74 AVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEKLKPV-IGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             EECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTTCCCC-EEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eecceeeccccCccccccccccccccccccccccc-cccc-cCCCCHH-HHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            999999999999999876    7999999999999 9999 9996555 6899999999999999888899999999874

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=7.9e-28  Score=195.04  Aligned_cols=170  Identities=23%  Similarity=0.254  Sum_probs=141.6

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      ++|+++++++|||++|.+..++++||+|+|+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|++++
T Consensus         5 ~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~~~~   83 (179)
T d1qora2           5 QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE   83 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEEECCCC
Confidence            699999999999999988889999999999999999999999999999999999999999999999 9999999999997


Q ss_pred             hhHHHHHHHHCCC-CccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhc-cceeeeeEeccc
Q 019042          214 PDLDAALKRCFPE-GIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGK-RIRMEGFLAGDF  291 (347)
Q Consensus       214 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~  291 (347)
                       ++.++++++|++ ++|+++|+.|++.+..++++++++|+++.++......     ...+...+..+ .+.+....+..+
T Consensus        84 -d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~  157 (179)
T d1qora2          84 -DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAV-----TGVNLGILNQKGSLYVTRPSLQGY  157 (179)
T ss_dssp             -CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCC-----CCBCTHHHHHTTSCEEECCCHHHH
T ss_pred             -CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCc-----cccchhhhhccceEEEEeeEEeee
Confidence             999999999988 9999999999999999999999999999988765432     22333333333 333333222222


Q ss_pred             ---ccchHHHHHHHHHHHHcCC
Q 019042          292 ---YHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       292 ---~~~~~~~~~~~~~~~~~g~  310 (347)
                         ++.+.+.+.++++++++|.
T Consensus       158 ~~~~~~~~~~~~~l~~lv~~Gv  179 (179)
T d1qora2         158 ITTREELTEASNELFSLIASGV  179 (179)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTTS
T ss_pred             cCCHHHHHHHHHHHHHHHHCcC
Confidence               4455667788889988873

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=3.3e-28  Score=194.63  Aligned_cols=168  Identities=20%  Similarity=0.234  Sum_probs=134.9

Q ss_pred             cccccCCchhhHHHHhh---hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEec
Q 019042          134 YTGILGMPGLTAYGGLY---ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNY  210 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~---~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~  210 (347)
                      ++|+++++++|||++++   +.....+|++|||+||+|++|.+++|+|+..|++|+++++++++.+.++ ++|+++++|+
T Consensus         5 eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~vi~~   83 (176)
T d1xa0a2           5 EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAR   83 (176)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEEC
T ss_pred             HHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccceeeec
Confidence            79999999999997654   4578889999999999999999999999999999999999999999999 9999999998


Q ss_pred             CChhhHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          211 KKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       211 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      ++  ++.+.++...++++|+|||+.|++.+..++++|+++|+++.+|...+     .....+...++.|++++.|.....
T Consensus        84 ~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g-----~~~~~~~~~~~~k~~~i~Gv~~~~  156 (176)
T d1xa0a2          84 ED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGG-----AEVPTTVHPFILRGVSLLGIDSVY  156 (176)
T ss_dssp             C-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSS-----SCCCCCSHHHHHTTCEEEECCSSS
T ss_pred             ch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccC-----cccCCCHHHHHHCCcEEEEEeCCc
Confidence            75  44555554444599999999999999999999999999999998654     334678889999999999975332


Q ss_pred             cccchHHHHHHHHHHHHcCCccc
Q 019042          291 FYHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                      .+   .+...++++.++ +.++|
T Consensus       157 ~~---~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         157 CP---MDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             CC---HHHHHHHHHHHH-TTTCC
T ss_pred             CC---HHHHHHHHHHHh-cccCC
Confidence            11   344555565553 66765

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=6.2e-27  Score=188.41  Aligned_cols=168  Identities=23%  Similarity=0.266  Sum_probs=147.7

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      .+++|+|.+.|||+++.+..++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|+++++|+++
T Consensus         5 ~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~   82 (174)
T d1f8fa2           5 LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKT   82 (174)
T ss_dssp             GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEEeCCC
Confidence            588999999999999988899999999999996 9999999999999999 6677788999999999 999999999998


Q ss_pred             hhhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccc
Q 019042          213 EPDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDF  291 (347)
Q Consensus       213 ~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  291 (347)
                      + ++.+.+++++++++|++|||+|. +.++.++++++++|+++.+|.....    ....++...++.+++++.|+..+++
T Consensus        83 ~-~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~----~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          83 Q-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             S-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             c-CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCC----cccccCHHHHHHCCCEEEEEEecCC
Confidence            7 99999999998899999999998 6889999999999999999874321    2234677888899999999876654


Q ss_pred             ccchHHHHHHHHHHHHcCC
Q 019042          292 YHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       292 ~~~~~~~~~~~~~~~~~g~  310 (347)
                        ..+++++++++++++|+
T Consensus       158 --~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 --SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             --CHHHHHHHHHHHHHTTS
T ss_pred             --ChHHHHHHHHHHHHcCC
Confidence              23678999999999886

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=2.5e-27  Score=192.98  Aligned_cols=179  Identities=37%  Similarity=0.635  Sum_probs=143.1

Q ss_pred             ccccccccCCchhhHHHHhhhhcCCCCC--CEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCee
Q 019042          131 LSYYTGILGMPGLTAYGGLYELCSPKKG--EYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDA  207 (347)
Q Consensus       131 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~--~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~v  207 (347)
                      +++...+|+.+++|||++|++..++++|  ++|||+||+|++|++++|+||..|+ .|+++++++++...+..++|++++
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            4444557888999999999999999987  8899999999999999999999999 566667777665555548999999


Q ss_pred             EecCChhhHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCcc----ccchHHHHhcccee
Q 019042          208 FNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEG----VHNLMQVVGKRIRM  283 (347)
Q Consensus       208 i~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~  283 (347)
                      +|++++ ++.+.+++.++.++|++||++|++.+..++++++++|+++.+|..++.+...+..    ......+..|++++
T Consensus        82 i~~~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~  160 (187)
T d1vj1a2          82 VNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITR  160 (187)
T ss_dssp             EETTSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEE
T ss_pred             eeccch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEE
Confidence            999997 9999999999779999999999999999999999999999999765432221111    12234456789999


Q ss_pred             eeeEecccccchHHHHHHHHHHHHcCC
Q 019042          284 EGFLAGDFYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       284 ~g~~~~~~~~~~~~~~~~~~~~~~~g~  310 (347)
                      .|+...++.+.+++.++++.+|+++|+
T Consensus       161 ~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         161 ERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             EECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             EEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            998877777777899999999999885

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=2e-27  Score=191.48  Aligned_cols=143  Identities=18%  Similarity=0.117  Sum_probs=120.1

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ||.||||+++.++  |+|    +++++  +|.|.| ++ +|||||+++++||++|++.+.|.+.....+|.++|||  ++
T Consensus         2 ~P~tMkA~v~~~~--g~p----l~l~e--vp~P~~-~~-~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE--~~   69 (175)
T d1llua1           2 LPQTMKAAVVHAY--GAP----LRIEE--VKVPLP-GP-GQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHE--GV   69 (175)
T ss_dssp             CCSEEEEEEBCST--TSC----CEEEE--EECCCC-CT-TCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSC--EE
T ss_pred             cchhcEEEEEEeC--CCC----CEEEE--eECCCC-CC-CEEEEEEEEecCcccchhhhccCccccccCCcCCCCc--ce
Confidence            7899999999998  777    56665  666666 77 9999999999999999999998765556789999999  55


Q ss_pred             eEEEEecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCcceeccCCCCCccc
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSY  133 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~  133 (347)
                      |+|+++|++++++++||||+..                               |+|+||++++++. ++++ |++++.. 
T Consensus        70 G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~-~~~i-Pd~l~~~-  146 (175)
T d1llua1          70 GYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNY-VGIL-PKNVKAT-  146 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTTCCCC-
T ss_pred             EEEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHH-EEEC-CCCCChh-
Confidence            6999999999999999999742                               4899999999999 9999 9996543 


Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                      .++++..++.|+++.+.  ....+|++|||+
T Consensus       147 ~a~~~~~~~~t~~~~~~--~g~~~G~~VLVl  175 (175)
T d1llua1         147 IHPGKLDDINQILDQMR--AGQIEGRIVLEM  175 (175)
T ss_dssp             EEEECGGGHHHHHHHHH--TTCCSSEEEEEC
T ss_pred             HHHHHHhHHHHHHHHHH--hCCCCCCEEEeC
Confidence            46777888889998873  344579999984

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=2.6e-26  Score=184.34  Aligned_cols=163  Identities=22%  Similarity=0.271  Sum_probs=146.4

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      ++|+++++++|||+++. ..++++|++|+|+|++|++|++++|++++.|+ +|++++++++|+++++ ++|+++++|+++
T Consensus         5 eAA~l~c~~~Ta~~al~-~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~   82 (170)
T d1jvba2           5 EAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASM   82 (170)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceeeccCC
Confidence            79999999999999995 57999999999999889999999999999996 9999999999999999 999999999988


Q ss_pred             hhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          213 EPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       213 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      . ++.+.+++.+.+ ++|++|||+|+ ..++.++++++++|+++.+|....      ...++...++.+++++.|+..+.
T Consensus        83 ~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          83 Q-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA------DLHYHAPLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC------CCCCCHHHHHHHTCEEEECCSCC
T ss_pred             c-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC------ccccCHHHHHhCCcEEEEEecCC
Confidence            7 888999988876 89999999998 578999999999999999987532      23466777889999999998766


Q ss_pred             cccchHHHHHHHHHHHHcCC
Q 019042          291 FYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~  310 (347)
                           +++++++++++++|+
T Consensus       156 -----~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 -----QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             -----HHHHHHHHHHHHTTS
T ss_pred             -----HHHHHHHHHHHHcCC
Confidence                 688999999999986

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=2.6e-27  Score=191.27  Aligned_cols=133  Identities=13%  Similarity=0.018  Sum_probs=111.7

Q ss_pred             EEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCceeeceEEEEecCCCCCCCCCCEEEe
Q 019042           28 KIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLSGYGVSKVLDSTHPNYKKDDLVWG  105 (347)
Q Consensus        28 ~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~g~G~v~~vG~~v~~~~vGd~V~~  105 (347)
                      .++.+++|.|.| ++ +|||||++++|||++|++.+.+....  ..++|+++|||  ++|+|+++|+++++|++||||+.
T Consensus        12 ~l~~~e~~~P~~-~~-~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE--~~G~Vv~vG~~v~~~~~GdrV~~   87 (178)
T d1e3ja1          12 DLRLEQRPIPEP-KE-DEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHE--ASGTVVKVGKNVKHLKKGDRVAV   87 (178)
T ss_dssp             EEEEEECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCE--EEEEEEEECTTCCSCCTTCEEEE
T ss_pred             cEEEEEeECCCC-CC-CEEEEEEEEEcccCchhhhhccCccccccccCCeeeccc--cceEEEecCcccCCCCCCCEEEE
Confidence            355555777866 78 99999999999999999877754322  33568999999  66699999999999999999974


Q ss_pred             c-------------------------------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcC
Q 019042          106 L-------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCS  154 (347)
Q Consensus       106 ~-------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~  154 (347)
                      .                               |+|+||++++++. ++++ |++++.. ++|+++..+.|||+++. .++
T Consensus        88 ~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~a~~-~~~  163 (178)
T d1e3ja1          88 EPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDNCNVK-QLVTHSFKLEQTVDAFE-AAR  163 (178)
T ss_dssp             CCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTCCCG-GGEEEEEEGGGHHHHHH-HHH
T ss_pred             CcccccCCccccccCCccccccccceeccccccccceeeeecccc-eeeC-CCCCCHH-HHHHHHhHHHHHHHHHH-HhC
Confidence            2                               6899999999999 9999 9995554 68889999999999984 589


Q ss_pred             CCCCCEEEEEcCCC
Q 019042          155 PKKGEYVYVSAASG  168 (347)
Q Consensus       155 ~~~~~~vlI~ga~g  168 (347)
                      +++|++|+|+||+.
T Consensus       164 ~~~g~~VlVig~C~  177 (178)
T d1e3ja1         164 KKADNTIKVMISCR  177 (178)
T ss_dssp             HCCTTCSEEEEECC
T ss_pred             CCCCCEEEEEcccc
Confidence            99999999999753

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=6e-27  Score=183.87  Aligned_cols=143  Identities=17%  Similarity=0.146  Sum_probs=120.1

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      |.++||+++.++  +.+    +.++.+++|.|+| ++ +||||||+++|||++|+..+.+.......+|+++|||++  |
T Consensus         1 m~~~KA~v~~~~--~~~----~~~~i~~v~~P~~-~~-~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~--G   70 (152)
T d1xa0a1           1 MSAFQAFVVNKT--ETE----FTAGVQTISMDDL-PE-GDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLA--G   70 (152)
T ss_dssp             CCEEEEEEEEEE--TTE----EEEEEEEEEGGGS-CS-CSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEE--E
T ss_pred             CCceEEEEEEec--CCc----eEEEEEEccCCCC-CC-CEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeee--e
Confidence            568899999998  776    3555566777777 77 999999999999999988888766555677999999944  5


Q ss_pred             EEEEecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCC
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPK  156 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  156 (347)
                      +|++  ..++.+++||+|++.         |+|+||++++++. ++++ |+++  +.++|+++++++|||.++....+++
T Consensus        71 ~v~~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~-~~~i-P~~l--~~~aa~l~~a~~ta~~~~~~~~~~~  144 (152)
T d1xa0a1          71 VVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKGL--ERIAQEISLAELPQALKRILRGELR  144 (152)
T ss_dssp             EEEE--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTTH--HHHEEEEEGGGHHHHHHHHHHTCCC
T ss_pred             eeec--cCCCccccCCEEEEecCccccccCCCcceeeeehhhc-cccC-CCCC--CHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            7766  667889999999865         6899999999999 9999 9994  4578899999999999988877775


Q ss_pred             CCCEEEEEc
Q 019042          157 KGEYVYVSA  165 (347)
Q Consensus       157 ~~~~vlI~g  165 (347)
                       |++|||+|
T Consensus       145 -G~tVL~l~  152 (152)
T d1xa0a1         145 -GRTVVRLA  152 (152)
T ss_dssp             -SEEEEECC
T ss_pred             -CCEEEEcC
Confidence             99999975

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.94  E-value=6.7e-27  Score=191.90  Aligned_cols=144  Identities=15%  Similarity=0.137  Sum_probs=123.5

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      .+||+||+++.++  +.|    +++++  ++.|.| ++ +|||||+.++|||++|++.+.+... ...+|.++|||  ++
T Consensus         5 ~~~~~kAav~~~~--~~p----l~i~e--v~~P~p-~~-~eVlIkv~a~giCgsD~~~~~g~~~-~~~~p~i~GhE--~~   71 (199)
T d1cdoa1           5 KVIKCKAAVAWEA--NKP----LVIEE--IEVDVP-HA-NEIRIKIIATGVCHTDLYHLFEGKH-KDGFPVVLGHE--GA   71 (199)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHHTTCC-TTSCSEECCCC--EE
T ss_pred             CceEEEEEEEecC--CCC----cEEEE--EECCCC-CC-CEEEEEEEEEEEecchhhhhhhccc-ccccccccccc--cc
Confidence            4789999999998  777    56665  566656 77 9999999999999999998887543 34568999999  55


Q ss_pred             eEEEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYS  113 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~  113 (347)
                      |+|+++|++++++++||||+..                                                   |+|+||+
T Consensus        72 G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~  151 (199)
T d1cdoa1          72 GIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYT  151 (199)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEE
T ss_pred             eEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEE
Confidence            6999999999999999999742                                                   6799999


Q ss_pred             eecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042          114 LIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus       114 ~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                      +++++. ++++ |++++.. ++|++.+++.|++.++......+.|++|||+
T Consensus       152 ~v~~~~-~~~i-P~~~~~~-~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         152 VVNQIA-VAKI-DPSVKLD-EFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             EEEGGG-EEEC-CTTSCCG-GGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             EEchHH-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999 9999 9996655 6899999999999999888888999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=8.8e-27  Score=190.50  Aligned_cols=144  Identities=18%  Similarity=0.140  Sum_probs=121.8

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      -+|||||++++++  |+|    +++++  +|.|+| ++ +|||||+.++|||++|++.+.|.+. ...+|+++|||  ++
T Consensus         3 ~~~~~kAav~~~~--g~~----l~i~e--vp~P~p-~~-~eVLVkv~a~gic~sD~~~~~G~~~-~~~~p~v~GhE--~~   69 (197)
T d2fzwa1           3 EVIKCKAAVAWEA--GKP----LSIEE--IEVAPP-KA-HEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHL--GA   69 (197)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCE--EE
T ss_pred             CceEEEEEEEccC--CCC----CEEEE--EECCCC-CC-CEEEEEEEEecCCCCcHHHHcCCcc-cccccccCCcc--ee
Confidence            4788999999998  887    55555  677767 77 9999999999999999999998653 35679999999  55


Q ss_pred             eEEEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYS  113 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~  113 (347)
                      |+|+++|++|+++++||+|+..                                                   |+|+||+
T Consensus        70 G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~  149 (197)
T d2fzwa1          70 GIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYT  149 (197)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEE
T ss_pred             eEEEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEE
Confidence            6999999999999999999741                                                   5899999


Q ss_pred             eecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042          114 LIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus       114 ~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                      ++++.. ++++ |++++.. ++|++++++.|++.++.....-+.+++|+|+
T Consensus       150 vvp~~~-~~~v-p~~l~~~-~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         150 VVADIS-VAKI-DPLIKVD-EFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             EEEGGG-EEEC-CTTSCSG-GGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             EechHH-EEEC-CCCCCHH-HHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999 9999 9996655 6889999999999998665555678888874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.93  E-value=3.1e-26  Score=186.79  Aligned_cols=171  Identities=19%  Similarity=0.245  Sum_probs=140.1

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEE-cCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhCCCeeE
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVS-AASGAVGQLVGQFAKLVGCYVVGSAGSK----EKVNLLKNKFGFDDAF  208 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~-ga~g~vG~~a~qla~~~G~~V~~~~~~~----~~~~~~~~~~g~~~vi  208 (347)
                      ++|+++++++|||++|.+..++++|++|+|+ ||+|++|++++|+||++|++|++++++.    ++.+.++ ++|+++++
T Consensus         5 ~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lGad~vi   83 (189)
T d1gu7a2           5 QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVI   83 (189)
T ss_dssp             HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEE
T ss_pred             HHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hccccEEE
Confidence            6999999999999999988999999988886 7789999999999999999999998653    3456677 99999999


Q ss_pred             ecCCh--hhHHHHHHHHC---CCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhcccee
Q 019042          209 NYKKE--PDLDAALKRCF---PEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRM  283 (347)
Q Consensus       209 ~~~~~--~~~~~~i~~~~---~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                      ++++.  .++.+.+++.+   ++++|++|||+|++.+..++++|+++|+++.+|..++.     ....+...++.|++++
T Consensus        84 ~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          84 TEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             EHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEE
T ss_pred             eccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCC-----CccCcHHHHHHCCcEE
Confidence            98542  13444555543   44899999999999999999999999999999975432     2345677788899999


Q ss_pred             eeeEeccc----ccchHHHHHHHHHHHHcCC
Q 019042          284 EGFLAGDF----YHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       284 ~g~~~~~~----~~~~~~~~~~~~~~~~~g~  310 (347)
                      .|++...+    ++...+.++++.+++++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99877655    4445678899999999885

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3e-26  Score=178.90  Aligned_cols=140  Identities=11%  Similarity=0.079  Sum_probs=116.2

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSKV   89 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~~   89 (347)
                      +.+.+.++  |+|  +.++++  ++|.|.| ++ +||+||++++++|++|++.+.|.+. ....|.++|||  ++|+|++
T Consensus         2 ~~i~~~~~--G~p--e~l~~~--e~~~P~p-~~-~eVlVkv~a~~in~~D~~~~~G~~~-~~~~p~~~G~e--~~G~V~~   70 (147)
T d1qora1           2 TRIEFHKH--GGP--EVLQAV--EFTPADP-AE-NEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTE--AAGIVSK   70 (147)
T ss_dssp             EEEEBSSC--CSG--GGCEEE--ECCCCCC-CT-TEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSC--EEEEEEE
T ss_pred             eEEEEccc--CCC--ceeEEE--EecCCCC-CC-CEEEEEEEEecccceeeeeecCCCC-CCcceeeeccc--cccceee
Confidence            45778888  888  455555  4677766 77 9999999999999999999888653 34568999999  5569999


Q ss_pred             ecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccc-cccccCCchhhHHHHhhhhcCCCCCCEEEE
Q 019042           90 LDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSY-YTGILGMPGLTAYGGLYELCSPKKGEYVYV  163 (347)
Q Consensus        90 vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~-~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI  163 (347)
                      +|+++++|++||||+..    |+|++|++++++. ++++ |++++++. ++++++..+.++++++.+ .++++|++|||
T Consensus        71 vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~~-P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          71 VGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             ECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             eeeecccccccceeeeeccccccceeEEEEehHH-eEEc-CcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            99999999999999743    7899999999999 9999 99976653 355677888888888865 68999999998

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.93  E-value=4.6e-29  Score=201.63  Aligned_cols=159  Identities=16%  Similarity=0.126  Sum_probs=133.9

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCC---------cccCCC
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPS---------FVASFN   76 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~---------~~~p~v   76 (347)
                      |+++||++++++  |.|+ +.+++++.++|.|.| ++ +|||||+++++||++|++.+.|.....         ..+|.+
T Consensus         1 m~t~kA~v~~~~--G~p~-~~l~l~~~~~p~p~~-~~-~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v   75 (175)
T d1gu7a1           1 MITAQAVLYTQH--GEPK-DVLFTQSFEIDDDNL-AP-NEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAP   75 (175)
T ss_dssp             CEEEEEEEESSC--SCHH-HHCEEEEEEECTTSC-CT-TEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEE
T ss_pred             CceeEEEEEccC--CCcc-cccEEEEEECCCCCC-Cc-CEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcc
Confidence            679999999999  8886 667898888998877 78 999999999999999999887753221         245788


Q ss_pred             CCCceeeceEEEEecCCCCCCCCCCEEEec----cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhh-
Q 019042           77 PGEPLSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYE-  151 (347)
Q Consensus        77 ~G~e~~g~G~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~-  151 (347)
                      +|+|  +.|+|+++|.++..++.||+|+..    |+|+||+++++++ ++++ |++  ++ ..++++..++|||+++.. 
T Consensus        76 ~G~e--~~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~-~~~i-P~~--~~-~~~a~~~~~~ta~~~l~~~  148 (175)
T d1gu7a1          76 CGNE--GLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNP--AQ-SKANGKPNGLTDAKSIETL  148 (175)
T ss_dssp             CCSC--CEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCH--HH-HHHTTCSCCCCCCCCEEEE
T ss_pred             cccc--cccccccccccccccccccceeccccccccccceeeehhhh-ccCC-Ccc--ch-hhhhccchHHHHHHHHHHH
Confidence            9999  556999999999999999999865    7899999999999 9999 998  55 344556788899998764 


Q ss_pred             hcCCCCCCEEEEEc-CCChHHHHHHH
Q 019042          152 LCSPKKGEYVYVSA-ASGAVGQLVGQ  176 (347)
Q Consensus       152 ~~~~~~~~~vlI~g-a~g~vG~~a~q  176 (347)
                      ..++++|++|+|+| |+|++|++++|
T Consensus       149 ~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         149 YDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             CCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             hcCCCCCCEEEEECccchhhhheEEe
Confidence            46899999999998 55789998876

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=1.5e-25  Score=179.16  Aligned_cols=161  Identities=23%  Similarity=0.329  Sum_probs=138.9

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      ++|+|+++++|||+++.+ +++++|++|+|+|+ |++|++++|+||.+|++|++++++++|++.++ ++|+++++|+++.
T Consensus         5 ~aA~l~ca~~Ta~~al~~-~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~   81 (166)
T d1llua2           5 EIAPILCAGVTVYKGLKQ-TNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNARQE   81 (166)
T ss_dssp             HHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHHHH-hCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccccccch
Confidence            689999999999999954 79999999999995 99999999999999999999999999999999 9999999999887


Q ss_pred             hhHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccccc
Q 019042          214 PDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYH  293 (347)
Q Consensus       214 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  293 (347)
                       ++.+.+.+.+.+..++++++.+.+.++.++++++++|+++.+|.+.+      ....+...++.|++++.|+..+.   
T Consensus        82 -~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~~~---  151 (166)
T d1llua2          82 -DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIVGT---  151 (166)
T ss_dssp             -CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEeecC---
Confidence             88888887765544444444455799999999999999999987532      23567788889999999987766   


Q ss_pred             chHHHHHHHHHHHHcC
Q 019042          294 QYPKFLELVMPAIKEG  309 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~g  309 (347)
                        +++++++++++++|
T Consensus       152 --~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 --RADLQEALDFAGEG  165 (166)
T ss_dssp             --HHHHHHHHHHHHTT
T ss_pred             --HHHHHHHHHHHHCc
Confidence              67799999999887

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=2.9e-25  Score=178.31  Aligned_cols=161  Identities=22%  Similarity=0.327  Sum_probs=139.9

Q ss_pred             cccccCCchhhHHHHhhhhc-CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          134 YTGILGMPGLTAYGGLYELC-SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~-~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                      ++|+|+++++|||+++.+.. .+++|++|+|+|+ |++|++++|++++.|+ +|++++++++|++.++ ++|+++++|++
T Consensus         8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~   85 (172)
T d1h2ba2           8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDAR   85 (172)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETT
T ss_pred             HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCc
Confidence            78999999999999997755 5799999999995 9999999999999997 7888899999999999 99999999998


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEec
Q 019042          212 KEPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG  289 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  289 (347)
                      +  +..+.+.+.+.+ ++|++|||+|+ ..++.++++++++|+++.+|...       ....+...++.|++++.|+..+
T Consensus        86 ~--~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~  156 (172)
T d1h2ba2          86 R--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVG  156 (172)
T ss_dssp             S--CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSC
T ss_pred             c--cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEec
Confidence            7  445556667766 89999999998 47999999999999999998632       1245677888999999999877


Q ss_pred             ccccchHHHHHHHHHHHHcCC
Q 019042          290 DFYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~g~  310 (347)
                      +     .++++++++++++|+
T Consensus       157 ~-----~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         157 N-----YVELHELVTLALQGK  172 (172)
T ss_dssp             C-----HHHHHHHHHHHHTTS
T ss_pred             C-----HHHHHHHHHHHHcCC
Confidence            6     577999999999886

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=2.2e-25  Score=178.56  Aligned_cols=164  Identities=25%  Similarity=0.302  Sum_probs=144.5

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      +||+++++++|||++++ ..++++|++|+|+|+ |++|++++|+++..|++|++++.+++|+++++ ++|+++++++++.
T Consensus         5 eAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~~~~   81 (168)
T d1rjwa2           5 EAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE   81 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceecccccc
Confidence            69999999999999996 479999999999985 99999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccccc
Q 019042          214 PDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYH  293 (347)
Q Consensus       214 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  293 (347)
                       ++.+.+++.+.+..|+++|+.+...+..++++++++|+++.+|....      ....+...++.+++++.|+..+.   
T Consensus        82 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~---  151 (168)
T d1rjwa2          82 -DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIVGT---  151 (168)
T ss_dssp             -CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccC------CCCCCHHHHHHCCcEEEEEeeCC---
Confidence             89999999887756666655555789999999999999999987532      34567888899999999987665   


Q ss_pred             chHHHHHHHHHHHHcCCcc
Q 019042          294 QYPKFLELVMPAIKEGKLV  312 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~g~~~  312 (347)
                        +++++++++++++|+++
T Consensus       152 --~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 --RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --HHHHHHHHHHHHTTSCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              67899999999999985

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=3.5e-26  Score=183.00  Aligned_cols=138  Identities=14%  Similarity=0.064  Sum_probs=115.3

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCceeeceEE
Q 019042           10 KQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLSGYGVS   87 (347)
Q Consensus        10 ~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~g~G~v   87 (347)
                      ||+++.++  |+|    ++++  +++.|+++++ +|||||+.+++||++|++.+.|....  ....|+++|||  ++|+|
T Consensus         1 kA~~~~~~--g~p----l~i~--~v~~P~~~~~-~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE--~~G~V   69 (171)
T d1h2ba1           1 KAARLHEY--NKP----LRIE--DVDYPRLEGR-FDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHE--NVGYI   69 (171)
T ss_dssp             CEEEESST--TSC----CEEE--CCCCCCCBTT-BCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCC--EEEEE
T ss_pred             CEEEEEeC--CCC----CEEE--EeeCCCCCCC-CEEEEEEEecccceeeehccCCCcccccCCcccccccee--eeeee
Confidence            79999998  877    4554  5777765467 99999999999999999888875432  23468999999  55699


Q ss_pred             EEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           88 KVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        88 ~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      +++|++++++++||||+..                              |+|+||++++++. ++++ |++++.. .+++
T Consensus        70 ~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~e-~aa~  146 (171)
T d1h2ba1          70 EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKDVRVE-VDIH  146 (171)
T ss_dssp             EEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTTCCCC-EEEE
T ss_pred             ecccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhc-ceec-CCCCCHH-HHHH
Confidence            9999999999999999752                              6899999999999 9999 9995553 4788


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEE
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYV  163 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI  163 (347)
                      +.+++.|||+++. ...+ .|++|||
T Consensus       147 ~~~~~~ta~~al~-~~~~-~G~~VlI  170 (171)
T d1h2ba1         147 KLDEINDVLERLE-KGEV-LGRAVLI  170 (171)
T ss_dssp             EGGGHHHHHHHHH-TTCC-SSEEEEE
T ss_pred             HHhHHHHHHHHHH-hcCC-CCCEEEe
Confidence            8999999999995 4677 8999998

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=3e-25  Score=179.96  Aligned_cols=164  Identities=21%  Similarity=0.232  Sum_probs=138.3

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      .+|++.|+++|||+++.+..++++|++|||+|+ |++|++++|+|++.|+ +|++++++++|++.++ ++|+++++|+++
T Consensus         5 ~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~   82 (182)
T d1vj0a2           5 VLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTT
T ss_pred             HHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEeccc
Confidence            478899999999999988889999999999996 9999999999999998 8999999999999999 999999999987


Q ss_pred             hhh---HHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccc-hHHHHhccceeeee
Q 019042          213 EPD---LDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHN-LMQVVGKRIRMEGF  286 (347)
Q Consensus       213 ~~~---~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~  286 (347)
                      . +   ..+.+.+++.+ ++|+||||+|+ ..++.++++++++|+++.+|.....    .....+ ...++.|++++.|+
T Consensus        83 ~-~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~l~~k~l~i~G~  157 (182)
T d1vj0a2          83 T-SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ----DPVPFKVYEWLVLKNATFKGI  157 (182)
T ss_dssp             S-CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCC----CCEEECHHHHTTTTTCEEEEC
T ss_pred             c-chHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCC----CccccccHHHHHHCCcEEEEE
Confidence            5 4   34557777877 89999999998 5789999999999999999864321    111223 34466799999999


Q ss_pred             EecccccchHHHHHHHHHHHHcC
Q 019042          287 LAGDFYHQYPKFLELVMPAIKEG  309 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~g  309 (347)
                      +.+.     .+.+++++++++++
T Consensus       158 ~~~~-----~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         158 WVSD-----TSHFVKTVSITSRN  175 (182)
T ss_dssp             CCCC-----HHHHHHHHHHHHTC
T ss_pred             EeCC-----HHHHHHHHHHHHHC
Confidence            8776     56788888888764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=1.4e-26  Score=185.55  Aligned_cols=159  Identities=24%  Similarity=0.307  Sum_probs=126.5

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      ++|+++++++|||+++.+ +++++||+|+|+|++|++|++++|+|++.|++|+++++++++++.++ ++|+++++|+.+ 
T Consensus         5 eAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~-   81 (171)
T d1iz0a2           5 EAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAE-   81 (171)
T ss_dssp             HHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGG-
T ss_pred             HHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceeeehhh-
Confidence            689999999999999965 89999999999999999999999999999999999999999999999 999999999864 


Q ss_pred             hhHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEeccccc
Q 019042          214 PDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYH  293 (347)
Q Consensus       214 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  293 (347)
                        ..+.+..  ++++|++|||+| +.+..++++++++|+++.+|...+.     ....+...++.|++++.|+....+.+
T Consensus        82 --~~~~~~~--~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~-----~~~~~~~~~~~k~~~i~g~~~~~~~~  151 (171)
T d1iz0a2          82 --VPERAKA--WGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPLLR  151 (171)
T ss_dssp             --HHHHHHH--TTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHHTT
T ss_pred             --hhhhhhc--cccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCC-----CCCccHHHHHHCCcEEEEEeCcChhh
Confidence              2233322  238999999988 6789999999999999999976532     23456677889999999998766522


Q ss_pred             chHHHHHHHHHHH
Q 019042          294 QYPKFLELVMPAI  306 (347)
Q Consensus       294 ~~~~~~~~~~~~~  306 (347)
                       .++.+++....+
T Consensus       152 -~~~~~~~~~~~l  163 (171)
T d1iz0a2         152 -EGALVEEALGFL  163 (171)
T ss_dssp             -CHHHHHHHHHHH
T ss_pred             -hHHHHHHHHHHH
Confidence             244455544443

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.93  E-value=2.4e-26  Score=189.29  Aligned_cols=141  Identities=16%  Similarity=0.214  Sum_probs=117.4

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      .+|||||++++++  ++|    +++++  +|.|.| ++ +||||||.++|||++|++.+.|..  ...+|+++|||++  
T Consensus         5 ~~~~~KAaV~~~~--g~p----l~i~e--vp~P~p-~~-geVlVkv~a~gic~sD~~~~~G~~--~~~~P~v~GHE~~--   70 (202)
T d1e3ia1           5 KVIKCKAAIAWKT--GSP----LCIEE--IEVSPP-KA-CEVRIQVIATCVCPTDINATDPKK--KALFPVVLGHECA--   70 (202)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHTTCTTS--CCCSSBCCCCEEE--
T ss_pred             CeEEEEEEEEccC--CCC----CEEEE--EECCCC-CC-CEEEEEEEEEEEeccccceeeeec--ccccccccccccc--
Confidence            4789999999998  777    55655  666666 77 999999999999999999998854  3456999999954  


Q ss_pred             eEEEEecCCCCCCCCCCEEEec-------------------------------------------------------cCc
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL-------------------------------------------------------TSW  109 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~-------------------------------------------------------g~~  109 (347)
                      |+|+++|++|+++++||+|+..                                                       |+|
T Consensus        71 G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~f  150 (202)
T d1e3ia1          71 GIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSF  150 (202)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCS
T ss_pred             eEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCc
Confidence            5999999999999999999742                                                       679


Q ss_pred             ceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042          110 EEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus       110 ~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      +||+++++.. ++++ |++++.. .++++.+++.+++.++..   +++|++|.|+.
T Consensus       151 aey~~v~~~~-l~~l-P~~~~~~-~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         151 SQYTVVSEAN-LARV-DDEFDLD-LLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             BSEEEEEGGG-EEEC-CTTSCGG-GGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             eEEEEEehhh-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            9999999999 9999 9996654 477888888888888743   46789887764

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=9.1e-26  Score=181.12  Aligned_cols=138  Identities=15%  Similarity=0.094  Sum_probs=113.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  ++|    ++++  ++|.|.| ++ +|||||++++|||++|++.+.+.......+|+++|||  ++|+|+
T Consensus         1 MkA~v~~~~--g~p----l~i~--~v~~P~~-~~-~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE--~~G~Vv   68 (171)
T d1rjwa1           1 MKAAVVEQF--KEP----LKIK--EVEKPTI-SY-GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE--GVGIVE   68 (171)
T ss_dssp             CEEEEBSST--TSC----CEEE--ECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSC--EEEEEE
T ss_pred             CeEEEEecC--CCC----cEEE--EeECCCC-CC-CeEEEEEEEeeccccceeeeecccccccccccccCCE--EEEEEE
Confidence            799999988  776    4555  4777767 77 9999999999999999988887666667789999999  556999


Q ss_pred             EecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCcceeccCCCCCccccccc
Q 019042           89 VLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGI  137 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~  137 (347)
                      ++|+.++++++||+|+..                               |+|+||+++++++ ++++ |+++  ++++|+
T Consensus        69 ~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~--~~e~A~  144 (171)
T d1rjwa1          69 EVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDNT--IIEVQP  144 (171)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTTC--CEEEEE
T ss_pred             EecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHH-EEEC-CCCC--CHHHHH
Confidence            999999999999999631                               6899999999998 9999 9995  446666


Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      |. ...++++.+.+ +.+ +|++|||+|
T Consensus       145 l~-~~~~~~~~~~~-~~~-~G~tVlViG  169 (171)
T d1rjwa1         145 LE-KINEVFDRMLK-GQI-NGRVVLTLE  169 (171)
T ss_dssp             GG-GHHHHHHHHHT-TCC-SSEEEEECC
T ss_pred             HH-HHHHHHHHHHh-cCC-CCCEEEEeC
Confidence            64 34566766643 455 599999998

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=6.2e-26  Score=172.45  Aligned_cols=128  Identities=15%  Similarity=0.093  Sum_probs=108.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++++  |+|    +++  .+++.|.| ++ +||+||++++|||++|++...|.+.....+|+++|||+  +|+| 
T Consensus         1 MkA~~~~~~--G~~----l~~--~e~~~p~p-~~-~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~--~G~V-   67 (131)
T d1iz0a1           1 MKAWVLKRL--GGP----LEL--VDLPEPEA-EE-GEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEV--VGVV-   67 (131)
T ss_dssp             CEEEEECST--TSC----EEE--EECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEE--EEEE-
T ss_pred             CcEEEEccC--CCC----CEE--EEccCCCC-CC-CEEEEEEEEEeccccccccccccccccccceeEeeeee--EEee-
Confidence            699999998  776    455  45677766 77 99999999999999999998887766667899999994  4577 


Q ss_pred             EecCCCCCCCCCCEEEec---cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042           89 VLDSTHPNYKKDDLVWGL---TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                                +||+|+++   |+|+||++++++. ++++ |++++.. ++|++++.+.|||++|.+.+  +.|++||++
T Consensus        68 ----------vGd~V~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          68 ----------EGRRYAALVPQGGLAERVAVPKGA-LLPL-PEGRPVV-GPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             ----------TTEEEEEECSSCCSBSEEEEEGGG-CEEC-CTTCCCE-EEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             ----------ccceEEEEeccCccceeeeeCHHH-eEEc-cCCCCHH-HHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence                      49999987   8999999999999 9999 9996555 69999999999999997755  458898863

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=2.1e-25  Score=178.93  Aligned_cols=167  Identities=20%  Similarity=0.148  Sum_probs=136.5

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      +++.+++++.|||+++ +.+++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++|++.++ ++|+++++|+++
T Consensus         5 ~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~~~~   81 (174)
T d1jqba2           5 NAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDILNYKN   81 (174)
T ss_dssp             HHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCccccccccc
Confidence            4667889999999998 4589999999999985 9999999999999998 7999999999999999 999999999988


Q ss_pred             hhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          213 EPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       213 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      + ++.+.+.+++++ ++|++|||+|+ ..++.++++++++|+++.+|.+..... .+ .....+....+++++.++....
T Consensus        82 ~-~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~-~~-~~~~~~~~~~~~~~i~g~~~~~  158 (174)
T d1jqba2          82 G-HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDA-LL-IPRVEWGCGMAHKTIKGGLCPG  158 (174)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSE-EE-EETTTTGGGTBCCEEEEBCCCC
T ss_pred             h-hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCc-Cc-CcHhHHHHHhCccEEEEecCCC
Confidence            7 899999999988 89999999997 578999999999999999997543210 00 0111223345677887775543


Q ss_pred             cccchHHHHHHHHHHHHcCC
Q 019042          291 FYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~  310 (347)
                      .    +..++++.++++.|+
T Consensus       159 ~----r~~~e~l~~li~~gk  174 (174)
T d1jqba2         159 G----RLRAERLRDMVVYNR  174 (174)
T ss_dssp             H----HHHHHHHHHHHHTTS
T ss_pred             C----cccHHHHHHHHHcCC
Confidence            1    455778888888775

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=9.9e-26  Score=180.31  Aligned_cols=161  Identities=19%  Similarity=0.181  Sum_probs=136.1

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      .||+|+|++.|||+++. ..++++|++|+|+|+ |++|++++|+|+.+|++|++++++++|++.++ ++|+++++|+.+.
T Consensus         5 ~AApl~cag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~   81 (168)
T d1piwa2           5 LAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEE   81 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGT
T ss_pred             HHHHHHHHHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEeeccch
Confidence            47899999999999995 479999999999996 99999999999999999999999999999999 9999999998653


Q ss_pred             hhHHHHHHHHCCCCccEEEECCCch---hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          214 PDLDAALKRCFPEGIDIYFENVGGK---MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       214 ~~~~~~i~~~~~~~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      .++.+.    ..+++|+++||.+..   .+..++++++++|+++.+|.+..      ....+...++.|++++.|+..+.
T Consensus        82 ~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~g~  151 (168)
T d1piwa2          82 GDWGEK----YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGS  151 (168)
T ss_dssp             SCHHHH----SCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCC
T ss_pred             HHHHHh----hhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------cccccHHHHHhCCcEEEEEeeCC
Confidence            243332    234799999998763   57889999999999999997542      22456667788999999988776


Q ss_pred             cccchHHHHHHHHHHHHcCCcc
Q 019042          291 FYHQYPKFLELVMPAIKEGKLV  312 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~~~  312 (347)
                           +++++++++++++|+++
T Consensus       152 -----~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 -----IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             -----HHHHHHHHHHHHHTTCC
T ss_pred             -----HHHHHHHHHHHHhCCCC
Confidence                 67899999999999875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.92  E-value=2e-24  Score=172.89  Aligned_cols=166  Identities=18%  Similarity=0.191  Sum_probs=134.8

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      ++|.|.|.+.|+|+++.+.+++++||+|+|+|+ |++|++++|+++..|+ +|++++.+++|+++++ ++|+++++|+..
T Consensus         5 ~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~   82 (174)
T d1e3ia2           5 RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRE   82 (174)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccCCcc
Confidence            588999999999999988899999999999985 9999999999999999 7889999999999999 999999998764


Q ss_pred             hhhHHH-HHHHHCCCCccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCccccchHHHHhccceeeeeEec
Q 019042          213 EPDLDA-ALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG  289 (347)
Q Consensus       213 ~~~~~~-~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  289 (347)
                      .++..+ ..+...++++|++|||+|. ..++.++++++++ |+++.+|.+..      ...++...++ .+.++.|+..+
T Consensus        83 ~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------~~~i~~~~~~-~~k~i~Gs~~G  155 (174)
T d1e3ia2          83 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDVI-LGRSINGTFFG  155 (174)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHHH-TTCEEEECSGG
T ss_pred             chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------ccccchHHHh-ccCEEEEEEee
Confidence            323334 4444445599999999998 5899999999996 99999997532      2233444443 35678888766


Q ss_pred             ccccchHHHHHHHHHHHHcCC
Q 019042          290 DFYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~g~  310 (347)
                      .+.  ..+++.++++++++|+
T Consensus       156 s~~--~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         156 GWK--SVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GCC--HHHHHHHHHHHHHTTS
T ss_pred             CCC--hHHHHHHHHHHHHCcC
Confidence            542  2678899999998875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=3.1e-24  Score=173.11  Aligned_cols=169  Identities=20%  Similarity=0.204  Sum_probs=137.3

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      ++|.|+|++.|||+++.+.+++++||+|+|+|+ |++|++++|+++++|+ +|++++++++|++.++ ++|+++++|+.+
T Consensus         5 ~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~   82 (176)
T d2fzwa2           5 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQD   82 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCc
Confidence            589999999999999988899999999999996 8999999999999997 7888999999999999 999999999864


Q ss_pred             h-hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          213 E-PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       213 ~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      . ++..+.++..+++++|++||++|. ..+..+..+++++|.++.++.....    .....+....+.+++++.|+..+.
T Consensus        83 ~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          83 FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----GEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGG
T ss_pred             hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccc----cccccccHHHHHCCCEEEEEeeeC
Confidence            2 256667777777799999999998 5778888999999888777543321    112233344455788999987766


Q ss_pred             cccchHHHHHHHHHHHHcCC
Q 019042          291 FYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~  310 (347)
                      +..  .+++.++++++++|+
T Consensus       159 ~~~--~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKS--VESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCH--HHHHHHHHHHHHTTS
T ss_pred             CcH--HHHHHHHHHHHHcCC
Confidence            432  677999999999886

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=4.5e-24  Score=171.18  Aligned_cols=167  Identities=18%  Similarity=0.172  Sum_probs=134.9

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      ++|.|.|++.|||+++.+.+++++||+|+|+|+ |++|++++|+|+++|+ +|++++++++|+++++ ++|+++++|+++
T Consensus         4 eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~   81 (174)
T d1p0fa2           4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKD   81 (174)
T ss_dssp             GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCCC
Confidence            689999999999999988899999999999995 9999999999999998 8999999999999999 999999999876


Q ss_pred             hhh-HHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhcc-CCEEEEEcccccccCCCCccccchHHHHhccceeeeeEec
Q 019042          213 EPD-LDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRI-HGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG  289 (347)
Q Consensus       213 ~~~-~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  289 (347)
                      .++ ..+..+..+++++|++||++|. ..+..++..+++ +|+++.+|.....    .....+. ..+.+++++.|+.++
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~----~~~~~~~-~~~~~~~~i~Gs~~G  156 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----ERLPLDP-LLLLTGRSLKGSVFG  156 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----CCEEECT-HHHHTTCEEEECSGG
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCc----cccccCH-HHHhCCCEEEEEEeC
Confidence            523 4455555666699999999998 577888888876 5999999975421    1112223 334567899998766


Q ss_pred             ccccchHHHHHHHHHHHHcCC
Q 019042          290 DFYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~g~  310 (347)
                      .+.   .++++++++++++|+
T Consensus       157 ~~~---~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         157 GFK---GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GCC---GGGHHHHHHHHHTTS
T ss_pred             CCC---HHHHHHHHHHHHcCC
Confidence            532   346889999998875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-24  Score=172.98  Aligned_cols=165  Identities=18%  Similarity=0.204  Sum_probs=137.7

Q ss_pred             cccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEec
Q 019042          132 SYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNY  210 (347)
Q Consensus       132 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~  210 (347)
                      +++.|++..++.+||+++. .+++++||+|+|+|+ |++|++++|+|+.+|+ +|++++++++|++.++ ++|+++++++
T Consensus         2 S~e~Aal~epla~a~~a~~-~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~   78 (171)
T d1pl8a2           2 TFEEGALIEPLSVGIHACR-RGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQI   78 (171)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCcccccc
Confidence            3456677788999999985 579999999999996 9999999999999999 8999999999999999 9999999988


Q ss_pred             CChhhHHHHHHH---HCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeee
Q 019042          211 KKEPDLDAALKR---CFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGF  286 (347)
Q Consensus       211 ~~~~~~~~~i~~---~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  286 (347)
                      ++. +..+..+.   ..+.++|++|||+|+ ..++.++++++++|+++.+|.+..      ....+...++.|++++.|+
T Consensus        79 ~~~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------~~~~~~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          79 SKE-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGV  151 (171)
T ss_dssp             SSC-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEEC
T ss_pred             ccc-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHHCCcEEEEE
Confidence            765 55444333   333489999999998 588999999999999999997542      2346778888999999998


Q ss_pred             EecccccchHHHHHHHHHHHHcCCcc
Q 019042          287 LAGDFYHQYPKFLELVMPAIKEGKLV  312 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~g~~~  312 (347)
                      ..+.      ++++++++++++|++.
T Consensus       152 ~~~~------~~~~~al~li~~gkid  171 (171)
T d1pl8a2         152 FRYC------NTWPVAISMLASKSVN  171 (171)
T ss_dssp             CSCS------SCHHHHHHHHHTTSCC
T ss_pred             eCCH------hHHHHHHHHHHcCCCC
Confidence            6432      4578899999999874

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.8e-24  Score=171.81  Aligned_cols=160  Identities=22%  Similarity=0.278  Sum_probs=133.1

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCCh
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKE  213 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~  213 (347)
                      .+|+|+|++.|+|+++. .+++++|++|+|+|+ |++|++++|+|+.+|+++++++++++++++++ ++|+++++|+.+.
T Consensus         8 ~~Apl~Cag~Tay~al~-~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~~   84 (168)
T d1uufa2           8 AVAPLLCAGITTYSPLR-HWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA   84 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH
T ss_pred             HHHHHHhHHHHHHHHHH-HhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEECchh
Confidence            57889999999999995 589999999999995 99999999999999999999999999999999 9999999999875


Q ss_pred             hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccc
Q 019042          214 PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFY  292 (347)
Q Consensus       214 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  292 (347)
                       +.....    .+++|++|||+|. ..+..++++++++|+++.+|.+.+     +....+...++.+++++.|+..+.  
T Consensus        85 -~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~l~~k~~~i~Gs~~~~--  152 (168)
T d1uufa2          85 -DEMAAH----LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGG--  152 (168)
T ss_dssp             -HHHHTT----TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC--
T ss_pred             -hHHHHh----cCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCC-----CcccccHHHHHHCCcEEEEEeecC--
Confidence             332211    1379999999998 579999999999999999987543     223456777888999999998766  


Q ss_pred             cchHHHHHHHHHHHHcCCc
Q 019042          293 HQYPKFLELVMPAIKEGKL  311 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~g~~  311 (347)
                         .+++++++++++++++
T Consensus       153 ---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHcCC
Confidence               6778899999887654

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.91  E-value=1.2e-24  Score=177.20  Aligned_cols=140  Identities=14%  Similarity=0.097  Sum_probs=106.3

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      |++|+|+++.+.  ++|    |++++  +|.|+| ++ +|||||+.++|||++|++.+.|.+.  .++|+++|||++  |
T Consensus         1 ~k~~~Aav~~~~--g~~----l~l~~--v~~P~p-~~-geVlVkv~a~gic~sD~~~~~G~~~--~~~P~i~GHE~~--G   66 (194)
T d1f8fa1           1 LKDIIAAVTPCK--GAD----FELQA--LKIRQP-QG-DEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGS--G   66 (194)
T ss_dssp             CEEEEEEEBCST--TCC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEE--E
T ss_pred             CceeEEEEEcCC--CCC----cEEEE--eeCCCC-CC-CEEEEEEEEEEecCchHhhhhhccc--ccCCcccccceE--E
Confidence            567899999888  766    56665  566666 77 9999999999999999999888543  467999999955  5


Q ss_pred             EEEEecCCCCCCCCCCEEEec----------------------------------------------------cCcceeE
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL----------------------------------------------------TSWEEYS  113 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~----------------------------------------------------g~~~~~~  113 (347)
                      +|+++|++++++++||||+..                                                    |+|+||.
T Consensus        67 ~V~~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~  146 (194)
T d1f8fa1          67 IIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYA  146 (194)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEE
T ss_pred             EeeecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeE
Confidence            999999999999999999642                                                    2345555


Q ss_pred             eecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE
Q 019042          114 LIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGS  188 (347)
Q Consensus       114 ~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~  188 (347)
                      ++++.. ++++ |++++.                          ++.++|.| .|++|++++|+++.+|++.++.
T Consensus       147 ~v~~~~-~~~i-p~~i~~--------------------------~~~~~i~g-~g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         147 LSRENN-TVKV-TKDFPF--------------------------DQLVKFYA-FDEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             EEEGGG-EEEE-CTTCCG--------------------------GGGEEEEE-GGGHHHHHHHHHHTSCSEEEEE
T ss_pred             EEehHH-EEEC-CCCCCc--------------------------ccEEEEeC-cHHHHHHHHHHHHHcCCCEEEE
Confidence            555555 5555 554221                          23355555 5999999999999999964443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.91  E-value=6.6e-24  Score=170.13  Aligned_cols=164  Identities=18%  Similarity=0.214  Sum_probs=134.5

Q ss_pred             cccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          132 SYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       132 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                      +++.|+|..++++||+++. ..++++|++|+|+| +|++|++++|+|+.+|++|++++++++|+++++ ++|++.+++++
T Consensus         2 S~e~Aal~ePla~a~~a~~-~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~   78 (170)
T d1e3ja2           2 SLEEGALLEPLSVGVHACR-RAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVD   78 (170)
T ss_dssp             CHHHHHTHHHHHHHHHHHH-HHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEecc
Confidence            3466677788999999995 57999999999998 599999999999999999999999999999999 99998776654


Q ss_pred             Ch----hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeee
Q 019042          212 KE----PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGF  286 (347)
Q Consensus       212 ~~----~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  286 (347)
                      ..    .+..+.+.+..++++|++|||+|+ ..++.++++++++|+++.+|.+..      ....+...++.|++++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~gs  152 (170)
T d1e3ja2          79 PAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSV  152 (170)
T ss_dssp             TTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEEC
T ss_pred             ccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHHHCCCEEEEE
Confidence            31    134455666666689999999998 578999999999999999997542      2345777888999999998


Q ss_pred             EecccccchHHHHHHHHHHHHcCC
Q 019042          287 LAGDFYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~g~  310 (347)
                      ....      ++++++++++++|+
T Consensus       153 ~~~~------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         153 FRYC------NDYPIALEMVASGR  170 (170)
T ss_dssp             CSCS------SCHHHHHHHHHTTS
T ss_pred             ECCH------HHHHHHHHHHHcCC
Confidence            5432      35778889998875

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=9.2e-25  Score=175.73  Aligned_cols=138  Identities=13%  Similarity=0.139  Sum_probs=111.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      |.|++||+++.++  ++|    +++++  +|.|+| ++ +||||||.++|||++|++.++|.+. ..++|+++|||  ++
T Consensus         1 m~~k~kA~v~~~~--~~p----l~i~e--v~~P~~-~~-~evlVkv~a~gIC~sD~~~~~G~~~-~~~~P~vlGHE--~~   67 (184)
T d1vj0a1           1 MGLKAHAMVLEKF--NQP----LVYKE--FEISDI-PR-GSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHE--GA   67 (184)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCE--EE
T ss_pred             CCceEEEEEEecC--CCC----cEEEE--eeCCCC-CC-CEEEEEEEEECCCCCchhheeccCC-cccccccccee--ee
Confidence            7899999999998  776    56655  666766 77 9999999999999999999988542 34679999999  55


Q ss_pred             eEEEEecCCCC-----CCCCCCEEEe---------------------------------------ccCcceeEeec-CCC
Q 019042           85 GVSKVLDSTHP-----NYKKDDLVWG---------------------------------------LTSWEEYSLIQ-SPQ  119 (347)
Q Consensus        85 G~v~~vG~~v~-----~~~vGd~V~~---------------------------------------~g~~~~~~~~~-~~~  119 (347)
                      |+|+++|++|+     ++++||+|+.                                       .|+|+||++++ +..
T Consensus        68 G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~  147 (184)
T d1vj0a1          68 GRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD  147 (184)
T ss_dssp             EEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCC
T ss_pred             eeeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHc
Confidence            69999999886     4689999973                                       25889999986 466


Q ss_pred             cceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042          120 HLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus       120 ~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                       ++++ |+++  +++.     +..+|++++ +.+++++|++|+|+.
T Consensus       148 -v~~i-p~~l--~~~~-----pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         148 -VLKV-SEKI--THRL-----PLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             -EEEE-CTTC--CEEE-----EGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             -EEEC-CCCC--CHHH-----HHHHHHHHH-HHhCCCcCCEEEEee
Confidence             9999 9994  4321     346788888 558999999999973

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.91  E-value=2.7e-24  Score=173.32  Aligned_cols=138  Identities=18%  Similarity=0.163  Sum_probs=109.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCC-------CCcccCCCCCCce
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDK-------PSFVASFNPGEPL   81 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~-------~~~~~p~v~G~e~   81 (347)
                      |||++++++  |+|    ++++  |+|.|+| ++ +|||||+.++|||++|++.+.|.+.       ...++|+++|||+
T Consensus         1 MKA~~~~~~--G~p----l~i~--dv~~P~p-~~-~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~   70 (177)
T d1jvba1           1 MRAVRLVEI--GKP----LSLQ--EIGVPKP-KG-PQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI   70 (177)
T ss_dssp             CEEEEECST--TSC----CEEE--ECCCCCC-CT-TCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEE
T ss_pred             CeEEEEEeC--CCC----CEEE--EeeCCCC-CC-CEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceE
Confidence            799999999  877    4555  4677766 77 9999999999999999998887532       2346799999995


Q ss_pred             eeceEEEEecCCCCCCCCCCEEEec------------------------------cCcceeEeecCCCcceeccCCCCCc
Q 019042           82 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEYSLIQSPQHLIKILDTNVPL  131 (347)
Q Consensus        82 ~g~G~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~  131 (347)
                      +  |+|+++|++++++++||+|+..                              |+|+||+++++.+.++++ |+..+.
T Consensus        71 ~--G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~-~~~~~~  147 (177)
T d1jvba1          71 A--GKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRVKPM  147 (177)
T ss_dssp             E--EEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCCC
T ss_pred             E--EEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEEC-CCCChH
Confidence            5  5999999999999999999742                              689999999877646776 765222


Q ss_pred             ccccccc-CCchhhHHHHhhhhcCCCCCCEEEE
Q 019042          132 SYYTGIL-GMPGLTAYGGLYELCSPKKGEYVYV  163 (347)
Q Consensus       132 ~~~aa~l-~~~~~tA~~~l~~~~~~~~~~~vlI  163 (347)
                        +++++ ..++.+|++++.. .++ .|++|||
T Consensus       148 --~~a~~~~~~~~~a~~~~~~-~~~-~G~~VlI  176 (177)
T d1jvba1         148 --ITKTMKLEEANEAIDNLEN-FKA-IGRQVLI  176 (177)
T ss_dssp             --CEEEEEGGGHHHHHHHHHT-TCC-CSEEEEE
T ss_pred             --HHHHHHHHHHHHHHHHHHh-hcc-cCCceEC
Confidence              44444 5688899999854 555 5899987

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=8.8e-26  Score=180.89  Aligned_cols=165  Identities=20%  Similarity=0.254  Sum_probs=132.1

Q ss_pred             cccccCCchhhHHHHhhh---hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEec
Q 019042          134 YTGILGMPGLTAYGGLYE---LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNY  210 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~---~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~  210 (347)
                      ++|++++++.|||++++.   .....++++|||+||+|++|++++|+||.+|++|+++++++++.+.++ ++|+++++|+
T Consensus         5 ~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~vi~~   83 (177)
T d1o89a2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASRVLPR   83 (177)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEEEEEG
T ss_pred             HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhcccccccc
Confidence            799999999999987643   333445679999999999999999999999999999999999999999 9999999999


Q ss_pred             CChhhHHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          211 KKEPDLDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       211 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      ++. ++.+.   +.....|.++|++|++.+..++++++++|+++.+|...+.     ....+...++.|++++.|+....
T Consensus        84 ~~~-~~~~~---l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~-----~~~~~~~~~~~k~~~i~G~~~~~  154 (177)
T d1o89a2          84 DEF-AESRP---LEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGF-----TLPTTVMPFILRNVRLQGVDSVM  154 (177)
T ss_dssp             GGS-SSCCS---SCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCS-----CCCCCSHHHHHHCCEEEECCSSS
T ss_pred             ccH-HHHHH---HHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCc-----cccccHHHHHHCCCeEEEEeccc
Confidence            765 44322   2233689999999999999999999999999999987543     23456788889999999975533


Q ss_pred             c-ccchHHHHHHHHHHHHc
Q 019042          291 F-YHQYPKFLELVMPAIKE  308 (347)
Q Consensus       291 ~-~~~~~~~~~~~~~~~~~  308 (347)
                      . ++...+.++++.+.+.+
T Consensus       155 ~~~~~~~~~~~~L~~~l~~  173 (177)
T d1o89a2         155 TPPERRAQAWQRLVADLPE  173 (177)
T ss_dssp             CCHHHHHHHHHHHHHHSCH
T ss_pred             CCHHHHHHHHHHHHHhccc
Confidence            2 44445556666555443

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=2.6e-24  Score=174.53  Aligned_cols=144  Identities=10%  Similarity=-0.095  Sum_probs=115.4

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      |.++||+++.++  +..  ..+++++.+   |.|+++ +|||||+.++|||++|++.+.|.+. ...+|+++|||  ++|
T Consensus         4 P~~~ka~~~~~~--~~~--~~~~~~~~~---p~p~~~-~eVlVkv~a~giC~sDl~~~~g~~~-~~~~P~i~GHE--~~G   72 (192)
T d1piwa1           4 PEKFEGIAIQSH--EDW--KNPKKTKYD---PKPFYD-HDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHE--IVG   72 (192)
T ss_dssp             TTCEEEEEECCS--SST--TSCEEEEEC---CCCCCT-TEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCC--EEE
T ss_pred             CceeEEEEEeCC--CcC--CcceEeecc---CCCCCC-CeEEEEEeeeCCCcchHHHHcCCCC-CCCCCcCcccc--ccc
Confidence            789999999888  544  345566543   235588 9999999999999999998887543 35679999999  455


Q ss_pred             EEEEecCCC-CCCCCCCEEEe--------------------------------------ccCcceeEeecCCCcceeccC
Q 019042           86 VSKVLDSTH-PNYKKDDLVWG--------------------------------------LTSWEEYSLIQSPQHLIKILD  126 (347)
Q Consensus        86 ~v~~vG~~v-~~~~vGd~V~~--------------------------------------~g~~~~~~~~~~~~~~~~i~P  126 (347)
                      +|+++|+++ +.+++||||..                                      .|+|+||++++++. ++++ |
T Consensus        73 ~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~-~~~i-P  150 (192)
T d1piwa1          73 KVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VVPI-P  150 (192)
T ss_dssp             EEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EEEC-C
T ss_pred             chhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHH-eEEC-C
Confidence            999999987 56999999951                                      16899999999988 9999 9


Q ss_pred             CCCCccccccccCCc-hhhHHHHhhhhcCCCCCCEEEEEc
Q 019042          127 TNVPLSYYTGILGMP-GLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus       127 ~~~~~~~~aa~l~~~-~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      ++++  ++.|++.+. +.|||+++. .++++++++|++..
T Consensus       151 ~~l~--~e~Aal~~~~~~ta~~~l~-~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         151 ENIW--VETLPVGEAGVHEAFERME-KGDVRYRFTLVGYD  187 (192)
T ss_dssp             TTCC--EEEEESSHHHHHHHHHHHH-HTCCSSEEEEECCH
T ss_pred             CCCC--HHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEC
Confidence            9954  455666665 569999995 68999999999863

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.90  E-value=2e-23  Score=168.19  Aligned_cols=169  Identities=18%  Similarity=0.192  Sum_probs=134.9

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      ++|.|+|++.|||+++.+.+++++||+|+|+|+ |++|++++|+++..|+ +|++++++++|++.++ ++|+++++++.+
T Consensus         5 ~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i~~~~   82 (176)
T d2jhfa2           5 KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVNPQD   82 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEEecCC
Confidence            699999999999999988899999999999997 8999999999999986 9999999999999999 999999998754


Q ss_pred             hhh-HHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          213 EPD-LDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       213 ~~~-~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      .++ ..+..+...++++|++||++|. ..++.++..++++|..+.++.....    ....+.....+.+++++.|+..+.
T Consensus        83 ~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          83 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCC----cccccccHHHHhCCCEEEEEEEeC
Confidence            323 4455555555699999999998 5778889999887544444443221    122334445667899999987665


Q ss_pred             cccchHHHHHHHHHHHHcCC
Q 019042          291 FYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~  310 (347)
                      +  ..+++++++++++.+|+
T Consensus       159 ~--~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 F--KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             C--CHHHHHHHHHHHHHTTS
T ss_pred             C--CHHHHHHHHHHHHHCcC
Confidence            3  33678999999998875

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.2e-24  Score=172.08  Aligned_cols=140  Identities=14%  Similarity=0.039  Sum_probs=109.4

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCC--CcccCCCCCCceee
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKP--SFVASFNPGEPLSG   83 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~--~~~~p~v~G~e~~g   83 (347)
                      ...++|++++.+       ++  ++.+++|.|+| ++ +||||||++++||++|++.+.+....  ...+|+++|||  +
T Consensus         5 ~p~~~a~V~~gp-------~~--l~l~evp~P~p-~~-~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE--~   71 (185)
T d1pl8a1           5 KPNNLSLVVHGP-------GD--LRLENYPIPEP-GP-NEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHE--A   71 (185)
T ss_dssp             CCCCEEEEEEET-------TE--EEEEECCCCCC-CT-TEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCE--E
T ss_pred             CCCCEEEEEeCC-------Ce--EEEEEeECCCC-CC-CEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeee--e
Confidence            347789999766       33  44455788877 78 99999999999999999887753221  33568999999  5


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec-------------------------------cCcceeEeecCCCcceeccCCCCCcc
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEYSLIQSPQHLIKILDTNVPLS  132 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~~~~~~~~~~i~P~~~~~~  132 (347)
                      +|+|+++|++++++++||||+..                               |+|+||+++++++ ++++ |++++..
T Consensus        72 ~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~-~~~l-P~~~~~~  149 (185)
T d1pl8a1          72 SGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDNVKPL  149 (185)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTCGGG
T ss_pred             eeeEEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHH-EEEC-CCCCCHH
Confidence            55999999999999999999742                               5699999999999 9999 9995443


Q ss_pred             ccccccCCchhhHHHHhhhhcCCCCCCEEEEE
Q 019042          133 YYTGILGMPGLTAYGGLYELCSPKKGEYVYVS  164 (347)
Q Consensus       133 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~  164 (347)
                       +++.+  +..+|++++. ..++++|++|+|.
T Consensus       150 -~aa~~--pl~~a~~a~~-~~~~~~G~~VlIg  177 (185)
T d1pl8a1         150 -VTHRF--PLEKALEAFE-TFKKGLGLKIMLK  177 (185)
T ss_dssp             -EEEEE--EGGGHHHHHH-HHHTTCCSEEEEE
T ss_pred             -HHHHH--HHHHHHHHHH-HhCCCCCCEEEEE
Confidence             34433  4567777774 4688999999994

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.90  E-value=3e-23  Score=167.08  Aligned_cols=168  Identities=18%  Similarity=0.140  Sum_probs=135.0

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      ++|.|+|++.|||+++.+.+++++||+|+|+|+ |++|++++++++..|+ +|++++++++|++.++ ++|+++++|+++
T Consensus         5 ~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~in~~~   82 (175)
T d1cdoa2           5 TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVNPND   82 (175)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEECGGG
T ss_pred             HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEEcCCC
Confidence            589999999999999988899999999999995 9999999999999987 8999999999999999 999999999876


Q ss_pred             hhhHHHHHHHHCC-CCccEEEECCCc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecc
Q 019042          213 EPDLDAALKRCFP-EGIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGD  290 (347)
Q Consensus       213 ~~~~~~~i~~~~~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  290 (347)
                      +++..+.+.+.+. +++|++||++|. ..+..+..+++++|.++.++....     ..........+.+++++.|+..+.
T Consensus        83 ~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-----~~~~~~~~~~~~~~~~i~Gs~~G~  157 (175)
T d1cdoa2          83 HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-----LHDVATRPIQLIAGRTWKGSMFGG  157 (175)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-----SSCEEECHHHHHTTCEEEECSGGG
T ss_pred             cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-----CcccCccHHHHHCCcEEEEEEEeC
Confidence            5344555555554 499999999998 578888888877755544433222     122345556667889999987665


Q ss_pred             cccchHHHHHHHHHHHHcCC
Q 019042          291 FYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~g~  310 (347)
                      +  ..+++++++++++++|+
T Consensus       158 ~--~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         158 F--KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             C--CHHHHHHHHHHHHHTTS
T ss_pred             C--cHHHHHHHHHHHHHcCC
Confidence            4  33688999999999885

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.4e-23  Score=162.65  Aligned_cols=126  Identities=10%  Similarity=-0.005  Sum_probs=103.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||+++.++  +++.    .++..+++.|.| ++ +||+|||+|+|||++|.....|.+.....+|+++|+|  ++|+|+
T Consensus         1 MkA~v~~~~--~~~~----~l~i~~v~~p~~-~~-geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e--~~G~V~   70 (146)
T d1o89a1           1 LQALLLEQQ--DGKT----LASVQTLDESRL-PE-GDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGID--FAGTVR   70 (146)
T ss_dssp             CEEEEEECC-----C----EEEEEECCGGGS-CS-CSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSE--EEEEEE
T ss_pred             CeEEEEEcC--CCce----EEEEEEcCCCCC-CC-CEEEEEEeeccCccceeeEEEeecccccccceecccc--ccccce
Confidence            799999998  7773    555566777766 77 9999999999999999988888766666779999999  555998


Q ss_pred             EecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHh
Q 019042           89 VLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGL  149 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l  149 (347)
                      ++|.  +.+++||+|+..         |+|+||++++++. ++++ |+++++. ++|++++++.||+..+
T Consensus        71 ~~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~-vv~l-P~~ls~~-eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          71 TSED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDW-LVAM-PQGQAAK-EISLSEAPNFAEAIIN  135 (146)
T ss_dssp             EECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTTSCCE-EECGGGHHHHHHHHHT
T ss_pred             eecc--CCccceeeEEeecccceecCCCcceeeeeeeeee-EEEC-CCCCCHH-HHHHHHHHHHHHHHHH
Confidence            8765  479999999863         7899999999999 9999 9996665 7999998888887655

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=5.7e-23  Score=164.89  Aligned_cols=166  Identities=17%  Similarity=0.159  Sum_probs=132.3

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      .+|.|+|.+.|+|+++.+.+++++||+|+|+|+ |++|++++|++++.|+ +|++++.+++|++.++ ++|+++++|+++
T Consensus         6 ~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in~~~   83 (176)
T d1d1ta2           6 KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECISPKD   83 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEECccc
Confidence            589999999999999988889999999999996 9999999999999996 8999999999999999 999999999886


Q ss_pred             hhhHHHHHHHHCCC-CccEEEECCCc-hhHHHHHHhhccC-CEEEEEcccccccCCCCccccchHHHHhccceeeeeEec
Q 019042          213 EPDLDAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIH-GRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAG  289 (347)
Q Consensus       213 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  289 (347)
                      .++..+.+.+.+.+ ++|++||++|. +.+..++..+.++ |+++.+|.+...    .....+... +.++.++.|+..+
T Consensus        84 ~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~----~~~~~~~~~-~~~~~~i~Gs~~G  158 (176)
T d1d1ta2          84 STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA----KMLTYDPML-LFTGRTWKGCVFG  158 (176)
T ss_dssp             CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTT----CCEEECTHH-HHTTCEEEECSGG
T ss_pred             cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccc----cccCCCHHH-HhCCCEEEEEEEe
Confidence            52345666665555 99999999998 4677777777665 999999975432    112223333 4467899998766


Q ss_pred             ccccchHHHHHHHHHHHHc
Q 019042          290 DFYHQYPKFLELVMPAIKE  308 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~  308 (347)
                      ..  ..++++.++++++.+
T Consensus       159 ~~--~~~~dip~li~~~~~  175 (176)
T d1d1ta2         159 GL--KSRDDVPKLVTEFLA  175 (176)
T ss_dssp             GC--CHHHHHHHHHHHHTT
T ss_pred             CC--CcHHHHHHHHHHHhC
Confidence            53  226778887777643

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=2.2e-25  Score=176.73  Aligned_cols=148  Identities=14%  Similarity=0.071  Sum_probs=119.3

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceE
Q 019042            7 VSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGV   86 (347)
Q Consensus         7 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~   86 (347)
                      .++||+++.++  +.+  ..++++  +++.|++ ++ +||||||+|+|||++|++...+.+.....+|.++|+|++|  +
T Consensus         2 ~~~ka~~~~~~--g~~--~~l~~~--~v~~p~l-~~-~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G--~   71 (162)
T d1tt7a1           2 TLFQALQAEKN--ADD--VSVHVK--TISTEDL-PK-DGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG--T   71 (162)
T ss_dssp             CEEEEEEECCG--GGS--CCCEEE--EEESSSS-CS-SSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEE--E
T ss_pred             CcEEEEEEEec--CCC--eEEEEE--EcCCCCC-CC-CEEEEEEEEecccchhhheeeecccccccceeeeeeeccc--c
Confidence            35799999998  665  334554  4666666 66 9999999999999999998888765556678999999555  7


Q ss_pred             EEEecCCCCCCCCCCEEEec---------cCcceeEeecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCC
Q 019042           87 SKVLDSTHPNYKKDDLVWGL---------TSWEEYSLIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKK  157 (347)
Q Consensus        87 v~~vG~~v~~~~vGd~V~~~---------g~~~~~~~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  157 (347)
                      |.+  +.++++++||+|+..         |+|+||++++++. ++++ |++++.. +||+++..++|||.++.. .....
T Consensus        72 v~~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~-l~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~-~~~~~  145 (162)
T d1tt7a1          72 VVS--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQNLSLK-EAMVDQLLTIVDREVSLE-ETPGA  145 (162)
T ss_dssp             EEE--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTTCCHH-HHHHSCSTTSEEEEECST-THHHH
T ss_pred             ccc--ccccccccceeeEeeeccceeccccccceEEEecHHH-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh-cCCCC
Confidence            665  567889999999864         7999999999999 9999 9996555 699999999999988754 34555


Q ss_pred             CCEEEEEcCCChH
Q 019042          158 GEYVYVSAASGAV  170 (347)
Q Consensus       158 ~~~vlI~ga~g~v  170 (347)
                      +++|||+|++|++
T Consensus       146 ~~~Vli~ga~G~v  158 (162)
T d1tt7a1         146 LKDILQNRIQGRV  158 (162)
T ss_dssp             HHHTTTTCCSSEE
T ss_pred             CCEEEEECCcceE
Confidence            6789999887754

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=3.9e-24  Score=169.58  Aligned_cols=155  Identities=23%  Similarity=0.262  Sum_probs=121.5

Q ss_pred             chhhHHHH---hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHH
Q 019042          141 PGLTAYGG---LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLD  217 (347)
Q Consensus       141 ~~~tA~~~---l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  217 (347)
                      ++.|||.+   |.+.....++++|||+||+|++|.+++|+||.+|++|++++++++|.+.++ ++|+++++++++  ...
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~--~~~   80 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISRED--VYD   80 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH--HCS
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccc--hhc
Confidence            45677755   444455667889999999999999999999999999999999999999999 999999998753  222


Q ss_pred             HHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhccceeeeeEecccccchHH
Q 019042          218 AALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK  297 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  297 (347)
                      +.+....++++|++||++|++.+..++++|+++|+++.+|...+.     ....+...++.|++++.|+.....+   .+
T Consensus        81 ~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~-----~~~~~~~~l~~k~~~i~G~~~~~~~---~~  152 (167)
T d1tt7a2          81 GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYCP---MD  152 (167)
T ss_dssp             SCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSCC---HH
T ss_pred             hhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCC-----cccCCHHHHHHCCcEEEEEecCCCC---HH
Confidence            233333334899999999999999999999999999999987543     3456788899999999997544322   23


Q ss_pred             HHHHHHHHH
Q 019042          298 FLELVMPAI  306 (347)
Q Consensus       298 ~~~~~~~~~  306 (347)
                      ...++.+.+
T Consensus       153 ~~~~~~~~l  161 (167)
T d1tt7a2         153 VRAAVWERM  161 (167)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            344444444

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=1.1e-25  Score=184.04  Aligned_cols=154  Identities=14%  Similarity=0.004  Sum_probs=118.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCC-----CCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceee
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLK-----VPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSG   83 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p-----~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g   83 (347)
                      +||++++.+       +++++++.+.|..     .| ++ +||+||+.+++||++|++.+.|..  ...+|+++|||  +
T Consensus         2 ~kA~v~~~~-------~~le~~e~~~P~~~~p~~~p-~~-~eVlVkv~a~giC~sDl~~~~G~~--~~~~P~v~GHE--~   68 (201)
T d1kola1           2 NRGVVYLGS-------GKVEVQKIDYPKMQDPRGKK-IE-HGVILKVVSTNICGSDQHMVRGRT--TAQVGLVLGHE--I   68 (201)
T ss_dssp             EEEEEEEET-------TEEEEEEECCCCSBCTTSCB-CS-SCEEEEEEEEECCHHHHHHHTTCS--CCCTTCBCCCC--E
T ss_pred             cEEEEEeCC-------CceEEEEecCCcccCCCCCC-CC-CEEEEEEEEEEEcchhhhhhcCCc--ccccceeccce--e
Confidence            699999887       3456665444421     23 56 999999999999999999988754  34679999999  4


Q ss_pred             ceEEEEecCCCCCCCCCCEEEec----------------------------------------cCcceeEeecCC-Ccce
Q 019042           84 YGVSKVLDSTHPNYKKDDLVWGL----------------------------------------TSWEEYSLIQSP-QHLI  122 (347)
Q Consensus        84 ~G~v~~vG~~v~~~~vGd~V~~~----------------------------------------g~~~~~~~~~~~-~~~~  122 (347)
                      +|+|+++|++|+++++||||+..                                        |+|+||+++|.. .+++
T Consensus        69 ~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~  148 (201)
T d1kola1          69 TGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLL  148 (201)
T ss_dssp             EEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCE
T ss_pred             eeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEE
Confidence            55999999999999999999621                                        589999999853 2499


Q ss_pred             eccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC
Q 019042          123 KILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC  183 (347)
Q Consensus       123 ~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~  183 (347)
                      ++ |++. +..+++++...+.++++++.. ...+.++    +| +|++|++++|+||.+||
T Consensus       149 ~i-Pd~~-~~~~~~~~~~~~~~~~~a~~~-~~~~~g~----~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         149 KL-PDRD-KAMEKINIAEVVGVQVISLDD-APRGYGE----FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             EC-SCHH-HHHHTCCHHHHHTEEEECGGG-HHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred             EC-CCCC-ChHHHHHHHHHHHHHHHHHHh-CCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence            99 9863 222577777777888888743 4444443    46 59999999999999886

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.88  E-value=2.9e-23  Score=170.05  Aligned_cols=141  Identities=16%  Similarity=0.147  Sum_probs=107.9

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeec
Q 019042            5 EAVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGY   84 (347)
Q Consensus         5 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~   84 (347)
                      ..+||||+++.++  ++|    +++++  +|.|.| ++ +||||||.++|||++|++.+.|.+  ..++|+++|||  ++
T Consensus         5 ~~~k~KAavl~~~--~~~----l~i~e--v~~P~p-~~-~eVlVkV~a~giC~sDl~~~~G~~--~~~~P~i~GHE--~~   70 (198)
T d2jhfa1           5 KVIKCKAAVLWEE--KKP----FSIEE--VEVAPP-KA-HEVRIKMVATGICRSDDHVVSGTL--VTPLPVIAGHE--AA   70 (198)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHHTSS--CCCSSBCCCCS--EE
T ss_pred             CceEEEEEEEecC--CCC----CEEEE--EECCCC-CC-CEEEEEEEEEecccccceeecCCc--ccccceecccc--ee
Confidence            4789999999988  666    56655  566666 77 999999999999999999999854  34679999999  55


Q ss_pred             eEEEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeE
Q 019042           85 GVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYS  113 (347)
Q Consensus        85 G~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~  113 (347)
                      |+|+++|++++++++||+|+..                                                   |+|+||+
T Consensus        71 G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~  150 (198)
T d2jhfa1          71 GIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYT  150 (198)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEE
T ss_pred             EEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeE
Confidence            6999999999999999999631                                                   5789999


Q ss_pred             eecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEc
Q 019042          114 LIQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSA  165 (347)
Q Consensus       114 ~~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~g  165 (347)
                      ++++.+ ++++ |++++++ .+++...++.....+.   ..+++|++|+|..
T Consensus       151 ~v~~~~-~~~~-p~~~~~e-~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         151 VVDEIS-VAKI-DAAFALD-PLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             EEEGGG-EEEC-CTTSCCG-GGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             EeCHHH-eEEC-CCCCCHH-HHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence            999999 9999 9986554 2333333322222221   2456788887763

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=6.7e-22  Score=161.05  Aligned_cols=168  Identities=21%  Similarity=0.189  Sum_probs=135.3

Q ss_pred             cccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCC
Q 019042          134 YTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKK  212 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~  212 (347)
                      +.++|+..+.|||+++. .+++++|++|+|+|+ |++|++++|+|+..|+ +|++++.+++|+++++ ++|+++++++.+
T Consensus         3 d~~~l~d~~~ta~~a~~-~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~   79 (195)
T d1kola2           3 DLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLD   79 (195)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSS
T ss_pred             hHHhcccHHHHHHHHHH-HhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCC
Confidence            46788999999999984 689999999999995 9999999999999998 8999999999999999 999999999888


Q ss_pred             hhhHHHHHHHHCCC-CccEEEECCCc----------------hhHHHHHHhhccCCEEEEEcccccccCCC-------Cc
Q 019042          213 EPDLDAALKRCFPE-GIDIYFENVGG----------------KMLDAVLLNMRIHGRIAVCGMISQYNLEK-------PE  268 (347)
Q Consensus       213 ~~~~~~~i~~~~~~-~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------~~  268 (347)
                      . ++.+.+.++|.+ ++|++|||+|.                +.++.++++++++|+++.+|.+.......       ..
T Consensus        80 ~-~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~  158 (195)
T d1kola2          80 T-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGS  158 (195)
T ss_dssp             S-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTC
T ss_pred             c-CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCc
Confidence            7 999999999987 99999999983                47999999999999999999754321100       01


Q ss_pred             cccchHHHHhccceeeeeEecccccchHHHHHHHHHHHHcCC
Q 019042          269 GVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGK  310 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~  310 (347)
                      ....+..++.|++++.+.   .  .+.++.++++++++.+++
T Consensus       159 ~~~~~~~~~~k~~~i~~g---~--~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         159 LSIRFGLGWAKSHSFHTG---Q--TPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCHHHHHHTTCEEEES---S--CCHHHHHHHHHHHHHTTS
T ss_pred             eeeeHHHHHhhcceeccC---C--CchHHHHHHHHHHHHcCC
Confidence            123344566778776532   2  123556778888887654

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.87  E-value=5.5e-23  Score=167.86  Aligned_cols=139  Identities=17%  Similarity=0.149  Sum_probs=106.7

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      .+||||++++++  ++|    +++++  +|.|.| ++ +|||||+.++|||++|++.+.|..  ...+|+++|||++  |
T Consensus         6 ~~~~KAav~~~~--g~~----l~i~e--v~~P~p-~~-~eVlVkv~a~gICgsDlh~~~G~~--~~~~P~i~GHE~~--G   71 (198)
T d1p0fa1           6 DITCKAAVAWEP--HKP----LSLET--ITVAPP-KA-HEVRIKILASGICGSDSSVLKEII--PSKFPVILGHEAV--G   71 (198)
T ss_dssp             CEEEEEEEBSST--TSC----CEEEE--EEECCC-CT-TEEEEEEEEEECCHHHHHHHTTSS--CCCSSBCCCCCEE--E
T ss_pred             ceEEEEEEEccC--CCC----CEEEE--EECCCC-CC-CEEEEEEEEEEEecccceeeeecc--ccccccccceeee--e
Confidence            569999999888  777    56665  566666 77 999999999999999999998754  2467999999955  5


Q ss_pred             EEEEecCCCCCCCCCCEEEec---------------------------------------------------cCcceeEe
Q 019042           86 VSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWEEYSL  114 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~  114 (347)
                      +|+++|++++++++||+|+..                                                   ++|+||++
T Consensus        72 ~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~  151 (198)
T d1p0fa1          72 VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTV  151 (198)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEE
T ss_pred             eeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEE
Confidence            999999999999999999731                                                   36899999


Q ss_pred             ecCCCcceeccCCCCCccccccccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHH
Q 019042          115 IQSPQHLIKILDTNVPLSYYTGILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQ  172 (347)
Q Consensus       115 ~~~~~~~~~i~P~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~  172 (347)
                      +++.. ++|+ |++++.+. .++..+..          ..+.+++.|+|.|+ |++|+
T Consensus       152 v~~~~-~~ki-p~~~~~~~-~~~~~~~~----------~~v~~~~~vlv~G~-G~iGl  195 (198)
T d1p0fa1         152 VADIA-VAKI-DPKINVNF-LVSTKLTL----------DQINKAFELLSSGQ-GVRSI  195 (198)
T ss_dssp             EETTS-EEEE-CTTSCGGG-GEEEEECG----------GGHHHHHHHTTTSS-CSEEE
T ss_pred             ecHHH-EEEC-CCCCCHHH-HHHhhcch----------hhcCCCCEEEEECC-CcceE
Confidence            99988 9999 88865542 22222221          22334456888884 87774

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1e-21  Score=157.43  Aligned_cols=128  Identities=17%  Similarity=0.126  Sum_probs=100.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++...+  ++|    |++  .|+|.|+| ++ +|||||+.++|||++|++.+.+... ...+|+++|||++  |+|+
T Consensus         1 m~a~~~~~~--~~p----l~i--~ev~~P~p-g~-geVlVkv~a~gic~sDl~~~~g~~~-~~~~P~i~GhE~~--G~V~   67 (179)
T d1uufa1           1 IKAVGAYSA--KQP----LEP--MDITRREP-GP-NDVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIV--GRVV   67 (179)
T ss_dssp             CEEEEBSST--TSC----CEE--EECCCCCC-CT-TEEEEEEEEEECCHHHHHHHHCTTS-CCCSSBCCCCCEE--EEEE
T ss_pred             CeEEEEccC--CCC----CEE--EEecCCCC-CC-CEEEEEEEEECCCCCcceeeeeeec-ccccccccccccc--ccch
Confidence            689988877  777    444  55777877 88 9999999999999999998887543 3567999999955  5999


Q ss_pred             EecCCCCCCCCCCEEEe---------------------------------------ccCcceeEeecCCCcceeccCCCC
Q 019042           89 VLDSTHPNYKKDDLVWG---------------------------------------LTSWEEYSLIQSPQHLIKILDTNV  129 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~---------------------------------------~g~~~~~~~~~~~~~~~~i~P~~~  129 (347)
                      ++|++|+++++||+|..                                       .|+|+||+++++++ ++++ |+. 
T Consensus        68 ~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~-~~~i-p~~-  144 (179)
T d1uufa1          68 AVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VLRI-RVA-  144 (179)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CEEC-CCC-
T ss_pred             hhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHH-EEEC-CCC-
Confidence            99999999999999951                                       16799999999999 9999 865 


Q ss_pred             CccccccccCCchhhHHHHhhhhcCCC
Q 019042          130 PLSYYTGILGMPGLTAYGGLYELCSPK  156 (347)
Q Consensus       130 ~~~~~aa~l~~~~~tA~~~l~~~~~~~  156 (347)
                       ..  .+.+..++.+|++++.+ +.++
T Consensus       145 -~~--~~~~a~~l~~a~~a~~~-a~v~  167 (179)
T d1uufa1         145 -DI--EMIRADQINEAYERMLR-GDVK  167 (179)
T ss_dssp             -CE--EEECGGGHHHHHHHHHT-TCSS
T ss_pred             -Cc--ChhHhchhHHHHHHHHH-hCcc
Confidence             22  22333466788888844 4544

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.84  E-value=3.4e-21  Score=153.95  Aligned_cols=109  Identities=17%  Similarity=0.077  Sum_probs=86.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeeceEEE
Q 019042            9 NKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYGVSK   88 (347)
Q Consensus         9 ~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G~v~   88 (347)
                      |||++++.+       +++++  .|+|.|.| ++ +|||||++++|||++|++.+.+... ...+|+++|||+  +|+|+
T Consensus         1 MKa~v~~~~-------~~l~i--~e~p~P~~-~~-~eVlIkv~a~gic~sD~~~~~~~~~-~~~~P~i~GhE~--~G~V~   66 (177)
T d1jqba1           1 MKGFAMLGI-------NKLGW--IEKERPVA-GS-YDAIVRPLAVSPCTSDIHTVFEGAL-GDRKNMILGHEA--VGEVV   66 (177)
T ss_dssp             CEEEEEEET-------TEEEE--EECCCCCC-CT-TCEEEEEEEECCCHHHHHHHHHCTT-CCCSSEECCCCE--EEEEE
T ss_pred             CeEEEEEeC-------CCeEE--EEeeCCCC-CC-CEEEEEEEEEecCCCcccccccCCC-CCCCCccCccee--eEEee
Confidence            799999887       33444  45677777 77 9999999999999999987765332 346699999995  45999


Q ss_pred             EecCCCCCCCCCCEEEec---------------------------------cCcceeEeecCC-CcceeccCCCCCcc
Q 019042           89 VLDSTHPNYKKDDLVWGL---------------------------------TSWEEYSLIQSP-QHLIKILDTNVPLS  132 (347)
Q Consensus        89 ~vG~~v~~~~vGd~V~~~---------------------------------g~~~~~~~~~~~-~~~~~i~P~~~~~~  132 (347)
                      ++|+++++|++||||+..                                 |+|+||++++.. ..++++ |++++.+
T Consensus        67 ~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~i-P~~~~~~  143 (177)
T d1jqba1          67 EVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAIL-PKDVDLS  143 (177)
T ss_dssp             EECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEEC-CTTSCGG
T ss_pred             ecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEEC-CCCcchH
Confidence            999999999999999721                                 689999999863 238999 9995544

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.83  E-value=6.9e-20  Score=140.96  Aligned_cols=141  Identities=25%  Similarity=0.376  Sum_probs=108.4

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccCCCCCCCCCeEEEEEEEeecChhccccccCCCCCCcccCCCCCCceeece
Q 019042            6 AVSNKQVILSNYVTGFPKESDMKIITGSINLKVPEGSKDTVLLKNLYLSCDPYMRGRMSKLDKPSFVASFNPGEPLSGYG   85 (347)
Q Consensus         6 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~evlikv~~~~i~~~d~~~~~~~~~~~~~~p~v~G~e~~g~G   85 (347)
                      |+++|+|++.+++.|.|++++|++++.++|  .| ++ +|||||++|.+++|..+....         |+.+|.-+.|.|
T Consensus         1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~ip--~~-~~-gevLvk~~~~svDp~~R~~~~---------~~~~g~~~~g~~   67 (147)
T d1v3va1           1 MVKAKSWTLKKHFQGKPTQSDFELKTVELP--PL-KN-GEVLLEALFLSVDPYMRIASK---------RLKEGAVMMGQQ   67 (147)
T ss_dssp             CCEEEEEEESSCCCSSCCGGGEEEEEEECC--CC-CT-TCEEEEEEEEECCTHHHHHGG---------GSCTTSBCCCCE
T ss_pred             CcccEEEEEccCCCCCCcccceEEEEEECC--CC-CC-CEEEEEEEEEeEccccccccc---------ccccCCccccce
Confidence            678999999999999998888999886665  44 67 999999999999998765443         233344344445


Q ss_pred             EEEEecCCCCCCCCCCEEEeccCcceeEeecCCCcceeccCCCCCc---cc-cccccCCchhh-HHHHhhhhcCCCCCCE
Q 019042           86 VSKVLDSTHPNYKKDDLVWGLTSWEEYSLIQSPQHLIKILDTNVPL---SY-YTGILGMPGLT-AYGGLYELCSPKKGEY  160 (347)
Q Consensus        86 ~v~~vG~~v~~~~vGd~V~~~g~~~~~~~~~~~~~~~~i~P~~~~~---~~-~aa~l~~~~~t-A~~~l~~~~~~~~~~~  160 (347)
                      +.+.++++.++|++||+|+++++|++|.+++.+. +.++ |...+.   .. ..+++...++| ||..+..  ..++|++
T Consensus        68 vg~Vv~S~~~~f~~GD~V~g~~gw~ey~v~~~~~-l~kv-~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~k~Get  143 (147)
T d1v3va1          68 VARVVESKNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTEWPDKKIQYHEHVTKGFENMPAAFIEMLN--GANLGKA  143 (147)
T ss_dssp             EEEEEEESCTTSCTTCEEEECCCSBSEEEECSSS-CEEC-CTTCCTTSSCCCEEEEECGGGHHHHHHHHHT--TCCSSEE
T ss_pred             EEEEEEeCCCcccCCCEEEEccCCEeEEEeccce-eeEc-cccccccccchhhhHhccccchHHHHHHhhC--CCCCCCE
Confidence            6666779999999999999999999999999999 9999 654321   11 45677777777 4546644  4567999


Q ss_pred             EEE
Q 019042          161 VYV  163 (347)
Q Consensus       161 vlI  163 (347)
                      |++
T Consensus       144 vv~  146 (147)
T d1v3va1         144 VVT  146 (147)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=1.1e-15  Score=102.61  Aligned_cols=70  Identities=26%  Similarity=0.320  Sum_probs=63.9

Q ss_pred             cccccCCchhhHHHHhhh---hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Q 019042          134 YTGILGMPGLTAYGGLYE---LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF  204 (347)
Q Consensus       134 ~aa~l~~~~~tA~~~l~~---~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~  204 (347)
                      +++++++++.|||.+++.   ....+++++|+|+|++|++|.+++|+++..|++|+++++++++.++++ ++|+
T Consensus         5 eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA   77 (77)
T d1o8ca2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA   77 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred             HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence            789999999999988753   356688999999999999999999999999999999999999999999 8885

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=1e-06  Score=72.73  Aligned_cols=105  Identities=24%  Similarity=0.393  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++++.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5889999999999999999999999999999999999888887677653   23455454244444443322  479999


Q ss_pred             EECCCch--------------------------hHHHHHHhhc--cCCEEEEEccccc
Q 019042          232 FENVGGK--------------------------MLDAVLLNMR--IHGRIAVCGMISQ  261 (347)
Q Consensus       232 id~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  261 (347)
                      +.++|..                          ..+.++..|+  .+|++|.+++...
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  140 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG  140 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence            9998731                          1244566663  4699999987543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.33  E-value=3.1e-06  Score=64.31  Aligned_cols=100  Identities=19%  Similarity=0.213  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +.-+|+|+|+ |-+|+.|+..|+.+|++|.+.+.+.++++.+++.++......+.+...+.+.+.+     +|+||.++=
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-----aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAE-----ADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHT-----CSEEEECCC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhcc-----CcEEEEeee
Confidence            3468999996 9999999999999999999999999999999855554322223332255555554     899999873


Q ss_pred             ---ch----hHHHHHHhhccCCEEEEEcccccc
Q 019042          237 ---GK----MLDAVLLNMRIHGRIAVCGMISQY  262 (347)
Q Consensus       237 ---~~----~~~~~~~~l~~~G~~v~~g~~~~~  262 (347)
                         ..    .-+..++.|+++..+|.+..-.+.
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG  137 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQGG  137 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCC
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEEEeecCCCC
Confidence               22    457888999999999999875443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.30  E-value=3e-06  Score=69.99  Aligned_cols=105  Identities=15%  Similarity=0.128  Sum_probs=76.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      -+|+++||+|+++++|.+.++.+...|++|+++.++++..+.++ +.+... ..|..+.++..+.+.+...  +++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            46899999999999999999999999999999999988877776 777642 3455554344444443322  3699999


Q ss_pred             ECCCch--------------------------hHHHHHHhhcc--CCEEEEEccccc
Q 019042          233 ENVGGK--------------------------MLDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       233 d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      .++|..                          ..+.++..|+.  +|++|.+++...
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            998831                          12445566654  589999887654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.28  E-value=3e-06  Score=70.28  Aligned_cols=105  Identities=17%  Similarity=0.160  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee---EecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA---FNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||++++|.+.++.+...|++|+.+++++++++.+.++++....   .|..+..+..+.+.+...  +.+|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            689999999999999999999999999999999999988887768876432   233443233333333322  369999


Q ss_pred             EECCCch--------------------------hHHHHHHhhc-cCCEEEEEccccc
Q 019042          232 FENVGGK--------------------------MLDAVLLNMR-IHGRIAVCGMISQ  261 (347)
Q Consensus       232 id~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~  261 (347)
                      +.++|..                          ..+.++..|+ .+|++|.+++...
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9999831                          1244556665 4799999987654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.27  E-value=1.6e-05  Score=65.63  Aligned_cols=104  Identities=17%  Similarity=0.238  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN----KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~----~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.++.++.+.+.+    +.|...   ..|..++++..+.+.+...  ++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58899999999999999999999999999999999887654332    445532   2355554344444443322  36


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhcc--CCEEEEEcccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMRI--HGRIAVCGMIS  260 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~  260 (347)
                      +|+++.++|..                          ..+.++..|+.  +|++|.+++..
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~  144 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT  144 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccch
Confidence            99999999831                          12446666744  58999988744

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.25  E-value=2e-06  Score=70.90  Aligned_cols=80  Identities=11%  Similarity=0.181  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCC--CCccEEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFP--EGIDIYFE  233 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~--~~~d~vid  233 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++++.+.+++++.. ..|..+.++..+.+.+...  +++|+++.
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            58999999999999999999999999999999999999888876777642 3455554344444433322  36999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        84 nAG   86 (242)
T d1ulsa_          84 YAG   86 (242)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            988

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4e-06  Score=69.11  Aligned_cols=79  Identities=18%  Similarity=0.167  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      -+|+++||+||++++|.+.++.+...|++|+++++++++++.+.++++..  ...|..+.++..+.+.++  +++|++++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~--g~iDilVn   82 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV--GPVDLLVN   82 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCCEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHh--CCceEEEe
Confidence            36899999999999999999999999999999999999888777566543  234555542333333222  37999999


Q ss_pred             CCC
Q 019042          234 NVG  236 (347)
Q Consensus       234 ~~g  236 (347)
                      ++|
T Consensus        83 nAg   85 (244)
T d1pr9a_          83 NAA   85 (244)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            987

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.16  E-value=5e-06  Score=68.38  Aligned_cols=78  Identities=15%  Similarity=0.144  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++.+++++++.+.++++...  ..|..+.++..+.+.++  +++|+++.+
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEEC
Confidence            58999999999999999999999999999999999998877765665432  34555542333333222  479999999


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      +|
T Consensus        82 Ag   83 (242)
T d1cyda_          82 AA   83 (242)
T ss_dssp             CC
T ss_pred             Cc
Confidence            88

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.1e-05  Score=66.75  Aligned_cols=105  Identities=17%  Similarity=0.139  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC----Ce----eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF----DD----AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~----~~----vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      .|+++||+||++|+|.+.++.+...|++|+++.++.++++.+.+++..    ..    ..|..+.+++.+.+.+...  +
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            488999999999999999999999999999999999887766545422    11    2355454344444443322  3


Q ss_pred             CccEEEECCCch------------------hHHHHHHhhcc-----CCEEEEEccccc
Q 019042          227 GIDIYFENVGGK------------------MLDAVLLNMRI-----HGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~------------------~~~~~~~~l~~-----~G~~v~~g~~~~  261 (347)
                      ++|++++++|..                  ....++..|++     +|++|.+++..+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            699999999841                  12344555543     488999987654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.15  E-value=3.8e-06  Score=69.18  Aligned_cols=107  Identities=18%  Similarity=0.167  Sum_probs=76.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDI  230 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~  230 (347)
                      -+|++++|+||++++|.+.++.+...|++|+++.+++++.+.+.++++...   ..|..++++..+.+.+...  +++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            368999999999999999999999999999999999999887776776422   2344454344444443332  36999


Q ss_pred             EEECCCch--------------------------hHHHHHHhhc--cCCEEEEEcccccc
Q 019042          231 YFENVGGK--------------------------MLDAVLLNMR--IHGRIAVCGMISQY  262 (347)
Q Consensus       231 vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~~  262 (347)
                      ++.++|..                          ..+.++..++  .+|++|.+++....
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  143 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL  143 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc
Confidence            99999831                          1133444443  35899999886543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.14  E-value=8.4e-06  Score=64.42  Aligned_cols=78  Identities=19%  Similarity=0.165  Sum_probs=58.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----C-CeeEecCChhhHHHHHHHHCCCCcc
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG----F-DDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g----~-~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      --+|++++|+||+|++|..+++.+...|++|++++++.++.+.+.+++.    . ....|..+.    +.+.+.. +++|
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~-~~iD   94 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD----ASRAEAV-KGAH   94 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH----HHHHHHT-TTCS
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH----HHHHHHh-cCcC
Confidence            3479999999999999999999999999999999999988776664442    2 233454443    2333333 3599


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++|++.|.
T Consensus        95 ilin~Ag~  102 (191)
T d1luaa1          95 FVFTAGAI  102 (191)
T ss_dssp             EEEECCCT
T ss_pred             eeeecCcc
Confidence            99999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.13  E-value=3.6e-06  Score=69.89  Aligned_cols=80  Identities=15%  Similarity=0.230  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.++.++++.+.+++|...   ..|..++++..+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            58899999999999999999999999999999999998887776887642   3355554344444443322  379999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +.+.|
T Consensus        84 VnnAg   88 (256)
T d1k2wa_          84 VNNAA   88 (256)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            99998

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=5.2e-06  Score=68.59  Aligned_cols=105  Identities=15%  Similarity=0.167  Sum_probs=75.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--CCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--EGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~~d~vi  232 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++++.+.++++...  ..|..+.++..+.+.+...  +++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            58999999999999999999999999999999999999888875555422  2344454344444443322  3699999


Q ss_pred             ECCCch---------------------------hHHHHHHhhcc-CCEEEEEccccc
Q 019042          233 ENVGGK---------------------------MLDAVLLNMRI-HGRIAVCGMISQ  261 (347)
Q Consensus       233 d~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~  261 (347)
                      .++|..                           ..+.++..|+. +|++|.+++...
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            998821                           02345555544 589999887544

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.1e-05  Score=66.95  Aligned_cols=81  Identities=25%  Similarity=0.382  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-Ce----eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF-DD----AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~-~~----vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      +|+++||+||++++|.+.++.+.+.|++|+.+.+++++++.+.+++   +. ..    ..|..++++..+.+.+...  +
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5889999999999999999999999999999999998877664333   32 12    2344554344444443332  3


Q ss_pred             CccEEEECCCc
Q 019042          227 GIDIYFENVGG  237 (347)
Q Consensus       227 ~~d~vid~~g~  237 (347)
                      ++|++|.++|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            69999999983

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.11  E-value=4.3e-06  Score=69.27  Aligned_cols=106  Identities=17%  Similarity=0.166  Sum_probs=75.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||++++|.+.++.+...|++|+.+.+++++.+.+.++++..   ...|..++++..+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            6899999999999999999999999999999999999887776577643   23444444344444433322  369999


Q ss_pred             EECCCch--------------------------hHHHHHHhhc--cCCEEEEEcccccc
Q 019042          232 FENVGGK--------------------------MLDAVLLNMR--IHGRIAVCGMISQY  262 (347)
Q Consensus       232 id~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~~  262 (347)
                      +.++|..                          ..+.++..++  .+|++|.+++....
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~  142 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL  142 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc
Confidence            9998831                          1233444443  36999999876543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.10  E-value=4.4e-06  Score=70.16  Aligned_cols=80  Identities=24%  Similarity=0.293  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++++.+.+++|...   ..|..+.++..+.+.+...  +.+|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            58999999999999999999999999999999999998877776777532   2344444233333333322  369999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +.++|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99887

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.08  E-value=9.3e-06  Score=67.10  Aligned_cols=105  Identities=15%  Similarity=0.277  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      +|++++|+||++|+|.+.++.+...|++|+++.+++++++.+.+++   |..   ...|..++++..+.+.+..  .+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            5789999999999999999999999999999999988876655443   432   2335455434444444332  2479


Q ss_pred             cEEEECCCch--------------------------hHHHHHHhh--ccCCEEEEEccccc
Q 019042          229 DIYFENVGGK--------------------------MLDAVLLNM--RIHGRIAVCGMISQ  261 (347)
Q Consensus       229 d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  261 (347)
                      |+++.+.|..                          ..+.++..+  +.+|++|.+++..+
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  149 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG  149 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence            9999988831                          123344444  34699999987544

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.06  E-value=8.4e-06  Score=68.12  Aligned_cols=80  Identities=19%  Similarity=0.317  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---e--eEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---D--AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~--vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++.+.+.++++..   .  ..|..+.++..+.+.+...  +.+|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            6899999999999999999999999999999999999888777676542   1  2344444344444433322  3699


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      +++.++|
T Consensus        85 ~lVnnAG   91 (268)
T d2bgka1          85 IMFGNVG   91 (268)
T ss_dssp             EEEECCC
T ss_pred             eeccccc
Confidence            9999987

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.02  E-value=9e-06  Score=67.20  Aligned_cols=81  Identities=10%  Similarity=0.089  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-e----eEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-D----AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~----vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++.+.+.++++.. .    ..|..+.++..+.+.+...  +++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            5899999999999999999999999999999999999888777666541 1    2344444233333333222  3799


Q ss_pred             EEEECCCc
Q 019042          230 IYFENVGG  237 (347)
Q Consensus       230 ~vid~~g~  237 (347)
                      ++++++|.
T Consensus        85 iLVnnAg~   92 (251)
T d1zk4a1          85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999983

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.00  E-value=9.2e-06  Score=66.70  Aligned_cols=104  Identities=10%  Similarity=0.123  Sum_probs=76.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      +|++++|+||++++|.+.++-+...|++|+++.++.++.+.+.++++...   ..|.+++++..+.+.+...  +++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            68999999999999999999999999999999999998877776777642   2344454344444444332  369999


Q ss_pred             EECCCch--------------------------hHHHHHHhhccCCEEEEEcccc
Q 019042          232 FENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       232 id~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.++|..                          ..+.++..++.++.++.++...
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            9988732                          1244566777788877766543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.98  E-value=1.2e-05  Score=66.82  Aligned_cols=105  Identities=20%  Similarity=0.256  Sum_probs=73.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++++.+.+++   |..   ...|..+.++..+.+.+...  +++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998877665443   332   12344444244444433322  369


Q ss_pred             cEEEECCCch---------------------------hHHHHHHhh--ccCCEEEEEccccc
Q 019042          229 DIYFENVGGK---------------------------MLDAVLLNM--RIHGRIAVCGMISQ  261 (347)
Q Consensus       229 d~vid~~g~~---------------------------~~~~~~~~l--~~~G~~v~~g~~~~  261 (347)
                      |+++++.|..                           ..+.++..+  +.+|++|.+++...
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  145 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG  145 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh
Confidence            9999988721                           023344544  45799999987554

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.97  E-value=2.4e-05  Score=60.16  Aligned_cols=103  Identities=15%  Similarity=0.069  Sum_probs=73.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeE-ecCCh------------------hhHHH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAF-NYKKE------------------PDLDA  218 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~~~~~------------------~~~~~  218 (347)
                      .-+|+|+|+ |.+|+.|+..|+.+|++|.+.+.+.++++.++ +++...+- +....                  ....+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            458999996 99999999999999999999999999999999 88774431 00000                  01112


Q ss_pred             HHHHHCCCCccEEEECCC---ch----hHHHHHHhhccCCEEEEEccccccc
Q 019042          219 ALKRCFPEGIDIYFENVG---GK----MLDAVLLNMRIHGRIAVCGMISQYN  263 (347)
Q Consensus       219 ~i~~~~~~~~d~vid~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~~~  263 (347)
                      .+.+... ..|+||-++-   ..    .-+..++.|++|..+|.+..-.+.+
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn  157 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGN  157 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCc
Confidence            2222111 4899998773   22    4478889999999999998755543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1e-05  Score=66.42  Aligned_cols=105  Identities=20%  Similarity=0.210  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHC--CCCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCF--PEGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~  228 (347)
                      .|++++|+||++|+|...+..+...|++|+++++++++++.+.++   .|..   ...|..+.++..+.+.+..  .+.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999999987766543   3432   2345555434444444332  2369


Q ss_pred             cEEEECCCch--------------------------hHHHHHHhhcc--CCEEEEEccccc
Q 019042          229 DIYFENVGGK--------------------------MLDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       229 d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      |+++.++|..                          ..+.++..|+.  .|++|.+++..+
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            9999999832                          12445555655  478988887543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.95  E-value=2.1e-05  Score=65.13  Aligned_cols=81  Identities=16%  Similarity=0.236  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe---eEecCChhhHH---HHHHHHCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD---AFNYKKEPDLD---AALKRCFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~---~~i~~~~~~~  227 (347)
                      +|+++||+||++++|.+.++.+...|++|+++++++++++.+.++   .+...   ..|..+.++..   +.+.+..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999999876655433   34322   24544442333   3344444457


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|+++.+.|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            9999999883

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=7.2e-06  Score=68.82  Aligned_cols=102  Identities=18%  Similarity=0.227  Sum_probs=68.0

Q ss_pred             CCEE-EEEcCCChHHHHHHHH-HHHCCCEEEEEeCCHHHHHHHHHHh---CCC-e--eEecCChhhHHHHHHHHCC--CC
Q 019042          158 GEYV-YVSAASGAVGQLVGQF-AKLVGCYVVGSAGSKEKVNLLKNKF---GFD-D--AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       158 ~~~v-lI~ga~g~vG~~a~ql-a~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      |.+| ||+||++|+|+++++. ++..|++|++++++.++.+.+.+++   +.. .  ..|..+.++..+.+.+...  ++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4556 8999999999988764 5556999999999999877665444   332 1  2455444233322222221  36


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +|++|+++|-.                          ..+.++..|++.|+++.+++.
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            99999999831                          124455667889999998764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.92  E-value=3.4e-05  Score=63.93  Aligned_cols=106  Identities=18%  Similarity=0.231  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHH----HhCCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-EKVNLLKN----KFGFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~-~~~~~~~~----~~g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      +|+++||+||++|+|.+.++.+...|++|+++.+++ ++.+.+.+    ..|...   ..|..+.++..+.+.+...  +
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            688999999999999999999999999999999863 44443332    334432   2344444244443333322  3


Q ss_pred             CccEEEECCCch--------------------------hHHHHHHhhcc--CCEEEEEcccccc
Q 019042          227 GIDIYFENVGGK--------------------------MLDAVLLNMRI--HGRIAVCGMISQY  262 (347)
Q Consensus       227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~  262 (347)
                      ++|+++.++|..                          ..+.++..|+.  +|++|.+++..+.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            699999999831                          12445555554  5899998876543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.91  E-value=1.5e-05  Score=66.08  Aligned_cols=105  Identities=18%  Similarity=0.276  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHH---HCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKR---CFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~---~~~~~  227 (347)
                      +|++++|+||++++|.+.++.+...|++|+.+.+++++++.+.+++   +..   ...|..+.++..+.+.+   ..++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998876665443   222   22344444233333333   33346


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhc--cCCEEEEEccccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMR--IHGRIAVCGMISQ  261 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  261 (347)
                      +|++++++|..                          ..+.++..|+  .+|++|.+++...
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            99999998831                          1234455553  3589999887543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.91  E-value=2.8e-05  Score=64.39  Aligned_cols=105  Identities=18%  Similarity=0.193  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-Ce----eEecCChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF-DD----AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~-~~----vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      +|++++|+||++|+|.+.++.+...|++|+++.++.++++.+.+++   +. ..    ..|..+.++..+.+.+...  +
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999998776554332   21 12    2355554344444443322  3


Q ss_pred             CccEEEECCCch------------h---------------HHHHHHhhc--cCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK------------M---------------LDAVLLNMR--IHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~------------~---------------~~~~~~~l~--~~G~~v~~g~~~~  261 (347)
                      ++|++++++|..            .               .+.++..++  .+|++|.+++...
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  146 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG  146 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence            699999998721            0               133444443  4699999987654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.91  E-value=1.5e-05  Score=66.66  Aligned_cols=80  Identities=18%  Similarity=0.290  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--Ce----eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF--DD----AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~----vi~~~~~~~~~~~i~~~~~--  225 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++++.+.+++   +.  ..    ..|..+.++..+.+.+...  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5889999999999999999999999999999999998877665443   22  11    2344444244333433322  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +++|+++.++|
T Consensus        84 g~iDilvnnAG   94 (272)
T d1xkqa_          84 GKIDVLVNNAG   94 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeCCc
Confidence            36999999987

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=1.4e-05  Score=65.69  Aligned_cols=78  Identities=19%  Similarity=0.294  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +|+++||+||++++|.+.++.+...|++|+++++++++++.+.+..+.. ...|.... +..+.+.+.. +++|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence            6899999999999999999999999999999999999888777444442 23444443 4444444333 3699999998


Q ss_pred             C
Q 019042          236 G  236 (347)
Q Consensus       236 g  236 (347)
                      |
T Consensus        83 g   83 (245)
T d2ag5a1          83 G   83 (245)
T ss_dssp             C
T ss_pred             c
Confidence            8

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.89  E-value=3.8e-06  Score=68.92  Aligned_cols=99  Identities=13%  Similarity=0.164  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCC-----hhhHHHHHHHHCCC-CccE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKK-----EPDLDAALKRCFPE-GIDI  230 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~-----~~~~~~~i~~~~~~-~~d~  230 (347)
                      +|++|||+||++++|.+.++.+...|++|+.+.+.+.+..      .....+....     .+.+...+.+.... ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999999999999999999999999999987654211      0111111111     11223333333333 7999


Q ss_pred             EEECCCc-h--------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          231 YFENVGG-K--------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       231 vid~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +++++|. .                          ..+.++..++++|++|.+++...
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            9999872 1                          02446667899999999987654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.89  E-value=3.2e-05  Score=64.14  Aligned_cols=106  Identities=21%  Similarity=0.273  Sum_probs=71.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      -.|+++||+||++++|.+.++.+...|++|+++.++ ++..+.+.+   +.|...   ..|..+.++..+.+.+...  +
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999987654 443333332   455532   2344443233333333222  3


Q ss_pred             CccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ++|+++.+.|..                          ..+.++..++.+|+++.+.+...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~  144 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA  144 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccc
Confidence            699999999831                          13557777888898888876443

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.88  E-value=3.3e-05  Score=63.97  Aligned_cols=105  Identities=14%  Similarity=0.217  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHH---HCCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKR---CFPEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~---~~~~~  227 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++++.+.+++   |..   ...|..+.++..+.+.+   ..++.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998876665443   332   12344444244433333   33336


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhc--cCCEEEEEccccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMR--IHGRIAVCGMISQ  261 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  261 (347)
                      +|+++++.|..                          ..+.++..++  .+|++|.+++...
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            99999999831                          1133455553  4689999987654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=1.2e-05  Score=66.66  Aligned_cols=81  Identities=21%  Similarity=0.317  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe---eEecCChhhHHHHHHHHCC--CCc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD---AFNYKKEPDLDAALKRCFP--EGI  228 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~~--~~~  228 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++.+.+.++   .|...   ..|..++++..+.+.+...  +++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999998877665433   34421   2344444233333333222  369


Q ss_pred             cEEEECCCc
Q 019042          229 DIYFENVGG  237 (347)
Q Consensus       229 d~vid~~g~  237 (347)
                      |+++.++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999883

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.87  E-value=5.1e-05  Score=63.31  Aligned_cols=106  Identities=21%  Similarity=0.269  Sum_probs=72.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--C
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      -+|+++||+||++++|.+.++.+...|++|++++++ ++..+.+.+   +.|...   ..|..+++++.+.+.+...  +
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            358999999999999999999999999999998776 343333321   445432   2344444344444444332  3


Q ss_pred             CccEEEECCCch--------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK--------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      ++|+++.+.|..                          ..+.++..|+.+|+++.+++...
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~  156 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  156 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc
Confidence            689999988731                          13556777888999998876543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.87  E-value=1.6e-05  Score=66.12  Aligned_cols=80  Identities=15%  Similarity=0.277  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--Ce----eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF--DD----AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~----vi~~~~~~~~~~~i~~~~~--  225 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++++.+.+++   +.  ..    ..|..+.++..+.+.+...  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6889999999999999999999999999999999998877665433   22  11    2344444244444443322  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +++|+++.++|
T Consensus        84 g~iDilvnnAG   94 (264)
T d1spxa_          84 GKLDILVNNAG   94 (264)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEeecccc
Confidence            36999999987

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.86  E-value=1.9e-05  Score=65.45  Aligned_cols=79  Identities=18%  Similarity=0.291  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHCC--CCcc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      |+.+||+||++|+|.+.++.+...|++|+++.+++++++.+.++   .|..   ...|..+.++..+.+.+...  +++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            67789999999999999999999999999999998877665433   3432   12344454344444433322  4699


Q ss_pred             EEEECCC
Q 019042          230 IYFENVG  236 (347)
Q Consensus       230 ~vid~~g  236 (347)
                      +++.++|
T Consensus        82 ilVnnAG   88 (257)
T d2rhca1          82 VLVNNAG   88 (257)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999988

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.85  E-value=0.00023  Score=53.89  Aligned_cols=75  Identities=21%  Similarity=0.260  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      +--.+.+|||+|+ |.+|.+.++.+...|+ +++++.|+.++.+.+.+++|.. +++++   ++.+.+.+     +|+||
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~---~~~~~l~~-----~Divi   89 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD---ELVDHLAR-----SDVVV   89 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG---GHHHHHHT-----CSEEE
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch---hHHHHhcc-----CCEEE
Confidence            3346789999996 9999999999999998 7999999988876555588853 44443   56666654     99999


Q ss_pred             ECCCch
Q 019042          233 ENVGGK  238 (347)
Q Consensus       233 d~~g~~  238 (347)
                      .|++..
T Consensus        90 ~atss~   95 (159)
T d1gpja2          90 SATAAP   95 (159)
T ss_dssp             ECCSSS
T ss_pred             EecCCC
Confidence            999863

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.85  E-value=7e-05  Score=63.39  Aligned_cols=105  Identities=22%  Similarity=0.215  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC---------HHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS---------KEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~---------~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      +|++++|+||++|+|.+.++.+...|++|++.+++         .+..+.+.++   .+.....|..+.++..+.+....
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            58999999999999999999999999999998543         3333333223   33344555555424444443322


Q ss_pred             --CCCccEEEECCCch--------------------------hHHHHHHhhc--cCCEEEEEccccc
Q 019042          225 --PEGIDIYFENVGGK--------------------------MLDAVLLNMR--IHGRIAVCGMISQ  261 (347)
Q Consensus       225 --~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  261 (347)
                        .+++|++|+++|..                          ..+.++..|+  .+|++|.+++..+
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence              24799999999831                          1244566664  3589999987553

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=2.3e-05  Score=66.31  Aligned_cols=83  Identities=16%  Similarity=0.229  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCC---eeEecCChhhHHHHHHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF--------GFD---DAFNYKKEPDLDAALKR  222 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~--------g~~---~vi~~~~~~~~~~~i~~  222 (347)
                      +.-+|++++|+||++++|.+.++.+...|++|+++.++.++++.+.+++        +..   ...|..+.++..+.+.+
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999999988776554343        121   12344444244443433


Q ss_pred             HCC--CCccEEEECCC
Q 019042          223 CFP--EGIDIYFENVG  236 (347)
Q Consensus       223 ~~~--~~~d~vid~~g  236 (347)
                      ...  +++|++++++|
T Consensus        88 ~~~~~G~iDiLVnnAg  103 (297)
T d1yxma1          88 TLDTFGKINFLVNNGG  103 (297)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHhCCeEEEEeecc
Confidence            322  36999999988

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.84  E-value=1.8e-05  Score=63.36  Aligned_cols=112  Identities=17%  Similarity=0.234  Sum_probs=76.6

Q ss_pred             ccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEecCCh
Q 019042          137 ILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKE  213 (347)
Q Consensus       137 ~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~  213 (347)
                      ++..+...|. .+ ...++++|++||.+|  +|.|..++.+++..|.+|+++...++-.+.+++   ++|.+.+..... 
T Consensus        60 ~is~P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-  134 (215)
T d1jg1a_          60 TVSAPHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG-  134 (215)
T ss_dssp             EECCHHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred             hhhhhhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-
Confidence            4444555554 23 567999999999999  578999999999889889999998775555543   456654332222 


Q ss_pred             hhHHHHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          214 PDLDAALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       214 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                       |..+....  .+.||.++-+.+- ..-...++.|++||++|..
T Consensus       135 -d~~~g~~~--~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         135 -DGSKGFPP--KAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             -CGGGCCGG--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -ccccCCcc--cCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence             21111111  1269999876665 4557788999999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.84  E-value=1.8e-05  Score=66.21  Aligned_cols=80  Identities=18%  Similarity=0.328  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--Ce----eEecCChhhHHHHHHHHCC--
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GF--DD----AFNYKKEPDLDAALKRCFP--  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~----vi~~~~~~~~~~~i~~~~~--  225 (347)
                      +|++++|+||++|+|.+.++.+...|++|+++.+++++++.+.+++   |.  ..    ..|..+.++..+.+.+...  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999998877665333   32  11    2344444234343433322  


Q ss_pred             CCccEEEECCC
Q 019042          226 EGIDIYFENVG  236 (347)
Q Consensus       226 ~~~d~vid~~g  236 (347)
                      +.+|+++.++|
T Consensus        83 G~iDilVnnAG   93 (274)
T d1xhla_          83 GKIDILVNNAG   93 (274)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeecc
Confidence            36999999987

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.77  E-value=2.1e-05  Score=65.26  Aligned_cols=80  Identities=13%  Similarity=0.136  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HhCCC---eeEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN----KFGFD---DAFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|+++||+||++++|.+.++.+...|++|+++.++.++.+.+.+    +.|..   ...|..+.++..+.+.+...  ++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            58899999999999999999999999999999998765543322    44543   23454554344444433322  47


Q ss_pred             ccEEEECCC
Q 019042          228 IDIYFENVG  236 (347)
Q Consensus       228 ~d~vid~~g  236 (347)
                      +|+++.+.|
T Consensus        88 iDilVnnAg   96 (260)
T d1h5qa_          88 ISGLIANAG   96 (260)
T ss_dssp             EEEEEECCC
T ss_pred             CcEeccccc
Confidence            999999987

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.76  E-value=3.4e-05  Score=65.22  Aligned_cols=81  Identities=11%  Similarity=0.214  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HhCCCe-e--EecCChhhHHHHHHHHC--CCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN----KFGFDD-A--FNYKKEPDLDAALKRCF--PEG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~i~~~~--~~~  227 (347)
                      +|+++||+||++++|.+.++.+...|++|+.+.++.++.+.+.+    +.|... .  .|..+.++..+.+....  .++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            58999999999999999999999999999999999887654432    334432 2  34444323333333222  247


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|+++.+.|.
T Consensus       104 iDilvnnAg~  113 (294)
T d1w6ua_         104 PNIVINNAAG  113 (294)
T ss_dssp             CSEEEECCCC
T ss_pred             cchhhhhhhh
Confidence            9999999883

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.74  E-value=0.00015  Score=59.91  Aligned_cols=100  Identities=22%  Similarity=0.342  Sum_probs=71.9

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ..+++++|++||=.|+  |.|.+++.+|+..|  .+|++++.+++..+.+++   .+|....+..... |.    .....
T Consensus        97 ~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-d~----~~~~~  169 (266)
T d1o54a_          97 MMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DI----SEGFD  169 (266)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CG----GGCCS
T ss_pred             HhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-cc----ccccc
Confidence            5589999999999984  55888899999875  599999999998887764   3454222222221 22    11122


Q ss_pred             C-CccEEEECCCc--hhHHHHHHhhccCCEEEEEc
Q 019042          226 E-GIDIYFENVGG--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       226 ~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      . .+|.|+-....  ..+..+.+.|+|||+++++.
T Consensus       170 ~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         170 EKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            2 68887766665  48899999999999998764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.73  E-value=6.1e-05  Score=61.83  Aligned_cols=104  Identities=15%  Similarity=0.193  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HH-HHHHHHhCCCe---eEecCChhhHHHHHHHHCC--CCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KV-NLLKNKFGFDD---AFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~-~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++. .. +.++ +.|...   ..|..+.++..+.+.+...  +++|
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH-HcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5889999999999999999999999999999998653 22 3334 666532   3344554344444433322  3699


Q ss_pred             EEEECCCch-----------h---------------HHHHHHhhcc--CCEEEEEccccc
Q 019042          230 IYFENVGGK-----------M---------------LDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       230 ~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      +++.++|..           .               .+.++..|+.  +|++|.+++...
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            999999831           1               2345555543  589999887654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.71  E-value=4.5e-05  Score=63.18  Aligned_cols=81  Identities=21%  Similarity=0.227  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE-KVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~-~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.++.+ +.+.+.+   +.|...   ..|..++++..+.+.+...  ++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5889999999999999999999999999999998743 3333321   455431   2344454344333333322  36


Q ss_pred             ccEEEECCCc
Q 019042          228 IDIYFENVGG  237 (347)
Q Consensus       228 ~d~vid~~g~  237 (347)
                      +|+++.++|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999883

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=0.00012  Score=59.44  Aligned_cols=72  Identities=28%  Similarity=0.372  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+    +.+... ..|.++  +....+.++  +.+|+++.++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~--~~~~~~~~~--g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRK--DLDLLFEKV--KEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTT--CHHHHHHHS--CCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHH--HHHHHHHHh--CCCcEEEecc
Confidence            5889999999999999999999999999999999876543    445432 223332  333333333  3699999998


Q ss_pred             C
Q 019042          236 G  236 (347)
Q Consensus       236 g  236 (347)
                      |
T Consensus        75 G   75 (234)
T d1o5ia_          75 G   75 (234)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.67  E-value=5.2e-05  Score=62.61  Aligned_cols=77  Identities=16%  Similarity=0.171  Sum_probs=55.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC---eeEecCChhhHHHHHHHHCC--CCccEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD---DAFNYKKEPDLDAALKRCFP--EGIDIY  231 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  231 (347)
                      .+||+||++|+|.+.++.+...|++|+.+.+++++++.+.++   .|..   ...|..+.++..+.+.+...  +++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            569999999999999999999999999999999887665433   3432   12455554344444433322  469999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +.++|
T Consensus        83 VnnAG   87 (255)
T d1gega_          83 VNNAG   87 (255)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99987

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.65  E-value=0.00015  Score=59.32  Aligned_cols=103  Identities=23%  Similarity=0.278  Sum_probs=67.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHH---HhCCC---eeEecCChhhHHHHHHHHCC--CCcc
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKEKVNLLKN---KFGFD---DAFNYKKEPDLDAALKRCFP--EGID  229 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~-~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  229 (347)
                      ..+||+||++++|.+.++.+...|++|++++ +++++.+.+.+   +.|..   ...|..+.++..+.+.+...  +++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999998875 45555544432   34542   12344444244333333321  4799


Q ss_pred             EEEECCCch--------------------------hHHHHHHhh--ccCCEEEEEccccc
Q 019042          230 IYFENVGGK--------------------------MLDAVLLNM--RIHGRIAVCGMISQ  261 (347)
Q Consensus       230 ~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  261 (347)
                      ++++++|..                          ..+.++..|  +.+|++|.+++..+
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  141 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG  141 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence            999999831                          124456666  45799999987543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.63  E-value=7.4e-05  Score=60.11  Aligned_cols=110  Identities=13%  Similarity=0.073  Sum_probs=71.7

Q ss_pred             CCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHH
Q 019042          139 GMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       139 ~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  218 (347)
                      ..+...|. .+ ....+++|++||-+|  +|.|..++.+++. +.+|+++..+++-.+.+++.+....-+..... |...
T Consensus        54 ~~p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~-d~~~  127 (224)
T d1vbfa_          54 TALNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILG-DGTL  127 (224)
T ss_dssp             CCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEES-CGGG
T ss_pred             ehhhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccC-chhh
Confidence            33444454 33 567999999999999  4578888877775 67999999999988888744433111111111 1111


Q ss_pred             HHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          219 ALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       219 ~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      ...+  .+.||.|+-+.+- ......++.|++||++|..
T Consensus       128 g~~~--~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         128 GYEE--EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             CCGG--GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cchh--hhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            1111  1359998876554 4557778999999999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.63  E-value=0.00012  Score=59.76  Aligned_cols=102  Identities=14%  Similarity=0.131  Sum_probs=69.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCE-------EEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCC-
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCY-------VVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFP-  225 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~-------V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~-  225 (347)
                      .|||+||++|+|.+.+..+...|++       |+...++.++++.+.+++   |..   ...|..+.++..+.+.+... 
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999888987       889999988877665443   332   12355554344333333221 


Q ss_pred             -CCccEEEECCCch--------------------------hHHHHHHhhcc--CCEEEEEccccc
Q 019042          226 -EGIDIYFENVGGK--------------------------MLDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       226 -~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                       +.+|+++++.|..                          ..+.++..|+.  +|+++.+++..+
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence             3699999998831                          12445666643  689999887654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.62  E-value=9e-05  Score=59.31  Aligned_cols=111  Identities=21%  Similarity=0.230  Sum_probs=73.8

Q ss_pred             cCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh---CCCeeEecCC
Q 019042          138 LGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF---GFDDAFNYKK  212 (347)
Q Consensus       138 l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~  212 (347)
                      +..+...|. .+ ...++++|++||-+|+  |.|..++.+++..|  .+|+++..+++..+.+++.+   +...+.-...
T Consensus        58 i~~P~~~a~-~l-~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~  133 (213)
T d1dl5a1          58 SSQPSLMAL-FM-EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG  133 (213)
T ss_dssp             ECCHHHHHH-HH-HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred             eccchhhHH-HH-HhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC
Confidence            333444444 23 5679999999999994  56889999999876  48999999998777776433   3332221111


Q ss_pred             hhhHHHHHHHHCCCCccEEEECCCch-hHHHHHHhhccCCEEEEE
Q 019042          213 EPDLDAALKRCFPEGIDIYFENVGGK-MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       213 ~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  256 (347)
                        |..+...  ..+.||+|+.+.+-. ..+..++.|++||+++..
T Consensus       134 --d~~~~~~--~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         134 --DGYYGVP--EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             --CGGGCCG--GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             --chHHccc--cccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence              1111110  012599999877653 457788999999999874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.61  E-value=5.3e-05  Score=62.35  Aligned_cols=79  Identities=18%  Similarity=0.135  Sum_probs=56.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCC---eeEecCChhhH---HHHHHHHCCC-Cc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFD---DAFNYKKEPDL---DAALKRCFPE-GI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~---~~~i~~~~~~-~~  228 (347)
                      .++|||+||++|+|.+.++.+...|+  +|+.++++.++++.+++..+..   ..+|..+.++.   .+.+.+..+. ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            37899999999999999988888886  7999999998888887333332   22344443233   3334433333 69


Q ss_pred             cEEEECCC
Q 019042          229 DIYFENVG  236 (347)
Q Consensus       229 d~vid~~g  236 (347)
                      |+++.++|
T Consensus        83 dilinnAG   90 (250)
T d1yo6a1          83 SLLINNAG   90 (250)
T ss_dssp             CEEEECCC
T ss_pred             EEEEEcCc
Confidence            99999998

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=7.8e-05  Score=62.03  Aligned_cols=106  Identities=20%  Similarity=0.193  Sum_probs=68.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCCe-eE--ecCChhhHHHHHHHHC--CC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK----FGFDD-AF--NYKKEPDLDAALKRCF--PE  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~-vi--~~~~~~~~~~~i~~~~--~~  226 (347)
                      -+|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++    .+... .+  |..+............  .+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999999988776533    22221 11  2222211211121111  13


Q ss_pred             CccEEEECCCch--------------------------hHHHHHHhhc-cCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK--------------------------MLDAVLLNMR-IHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~  261 (347)
                      ..|+++.+.|..                          ..+.++..|+ .+|+++.+++..+
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~  153 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG  153 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence            689998877631                          1133444444 4789998887654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.55  E-value=1.5e-05  Score=65.15  Aligned_cols=97  Identities=18%  Similarity=0.153  Sum_probs=63.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCC--h---hhHHHHHHH-HCCCCccEEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKK--E---PDLDAALKR-CFPEGIDIYF  232 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~--~---~~~~~~i~~-~~~~~~d~vi  232 (347)
                      .+|||+||++++|.+.++.+...|++|+.+++++++..  .    ....+..+.  .   ....+.+.. +..+++|+++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li   76 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--D----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   76 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--S----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc--c----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence            47999999999999999999999999999998765311  0    111111111  0   011122222 2234799999


Q ss_pred             ECCCc-h--------------------------hHHHHHHhhccCCEEEEEccccc
Q 019042          233 ENVGG-K--------------------------MLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       233 d~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      .++|. .                          ..+.++..|+++|+++.+++...
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            99872 1                          02446667889999999987554

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.53  E-value=0.00026  Score=54.15  Aligned_cols=94  Identities=16%  Similarity=0.018  Sum_probs=65.3

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      +..++.++++|+|+|+ ||.+.+++.-++..|+ ++.++.|+.++.+.+.+.++... ++...            ...+|
T Consensus        10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~------------~~~~D   75 (167)
T d1npya1          10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE------------NQQAD   75 (167)
T ss_dssp             HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT------------TCCCS
T ss_pred             HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc------------ccchh
Confidence            3356678899999996 9999999999999998 89999999998888775676543 22111            12489


Q ss_pred             EEEECCCch--------hHHHHHHhhccCCEEEEEcc
Q 019042          230 IYFENVGGK--------MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       230 ~vid~~g~~--------~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ++|+|+.-.        .+......+++...++.+-.
T Consensus        76 liINaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY  112 (167)
T d1npya1          76 ILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  112 (167)
T ss_dssp             EEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             hheeccccCCccccccccccccHhhcCCcceEEEEee
Confidence            999987521        11111234566666666644

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.51  E-value=4.8e-05  Score=62.79  Aligned_cols=105  Identities=17%  Similarity=0.078  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhCCCe----eEecC-ChhhHHHHHHHHCC--C
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK---NKFGFDD----AFNYK-KEPDLDAALKRCFP--E  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~---~~~g~~~----vi~~~-~~~~~~~~i~~~~~--~  226 (347)
                      +|++|+|+||++|+|.+.+..+...|++|+++.++.++.+.+.   ...+...    ..|.. +..++.+.+.+...  +
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999988877655433332   1223222    22332 21123333333222  3


Q ss_pred             CccEEEECCCch---h---------------HHHHHHhhc-----cCCEEEEEccccc
Q 019042          227 GIDIYFENVGGK---M---------------LDAVLLNMR-----IHGRIAVCGMISQ  261 (347)
Q Consensus       227 ~~d~vid~~g~~---~---------------~~~~~~~l~-----~~G~~v~~g~~~~  261 (347)
                      ++|+++.++|..   .               .+.++..|.     ++|+++.+++..+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            699999999841   1               233444553     3588998877654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.46  E-value=2.4e-05  Score=63.94  Aligned_cols=75  Identities=15%  Similarity=0.135  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCC--CCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP--EGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--~~~d~vid~  234 (347)
                      +|++++|+||++++|.+.++.+...|++|+++.+++++.+.+.     ....|..+.++..+.+.+...  +++|+++.+
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            6899999999999999999999999999999998865432111     123455554234333333322  369999999


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      +|
T Consensus        81 AG   82 (237)
T d1uzma1          81 AG   82 (237)
T ss_dssp             CS
T ss_pred             ec
Confidence            88

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.44  E-value=0.00055  Score=57.20  Aligned_cols=104  Identities=11%  Similarity=0.025  Sum_probs=71.3

Q ss_pred             HHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHH
Q 019042          146 YGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       146 ~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~  222 (347)
                      +.-+.+.+++++|++||=+|  .|.|-.+..+|+..|++|++++.+++..+.+++   ..|....+..... |+     .
T Consensus        50 ~~~~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~-----~  121 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW-----E  121 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CG-----G
T ss_pred             HHHHHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cc-----c
Confidence            34455668999999999999  467778899999999999999999987666552   3454322222111 22     1


Q ss_pred             HCCCCccEEEE-----CCCc-----------hhHHHHHHhhccCCEEEEEc
Q 019042          223 CFPEGIDIYFE-----NVGG-----------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       223 ~~~~~~d~vid-----~~g~-----------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ...+.||.|+.     ..+.           ..++.+.+.|+|+|++++-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            12347998864     2222           24778889999999998643

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.40  E-value=0.00025  Score=57.94  Aligned_cols=99  Identities=6%  Similarity=0.075  Sum_probs=70.2

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh---CC-CeeEecCChhhHHHHHHHHC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF---GF-DDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~---g~-~~vi~~~~~~~~~~~i~~~~  224 (347)
                      ...+++||++||=.|+  |.|.++..+|+..|  .+|++++.+++..+.+++.+   +. .. ++.... |+.+    ..
T Consensus        79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~n-v~~~~~-Di~~----~~  150 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGN-VRTSRS-DIAD----FI  150 (250)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTT-EEEECS-CTTT----CC
T ss_pred             HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCc-eEEEEe-eeec----cc
Confidence            4579999999999984  56888888998864  49999999999888887543   22 22 222222 3222    22


Q ss_pred             CC-CccEEEECCCc--hhHHHHHHhhccCCEEEEEc
Q 019042          225 PE-GIDIYFENVGG--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       225 ~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+ .+|.|+-....  ..+..+.+.|++||+++++.
T Consensus       151 ~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         151 SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            23 79988765554  48899999999999998763

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.00023  Score=58.31  Aligned_cols=49  Identities=14%  Similarity=0.085  Sum_probs=43.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD  205 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~  205 (347)
                      +|++++|+||++|+|.+.++.+...|++|+++.+++++++.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999988777666577763

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.38  E-value=0.00017  Score=59.39  Aligned_cols=105  Identities=15%  Similarity=0.103  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCee--EecCChhhHHHHHHHHCC--CC
Q 019042          157 KGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDA--FNYKKEPDLDAALKRCFP--EG  227 (347)
Q Consensus       157 ~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~v--i~~~~~~~~~~~i~~~~~--~~  227 (347)
                      +|++++|+||+|  |+|.+.++.+...|++|+++.++++..+.+++   ..+....  .|..+.++..+.+.+...  ++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            589999999987  89999999999999999999888654433331   2333222  344443233333333221  36


Q ss_pred             ccEEEECCCch---------------h---------------HHHHHHhhccCCEEEEEccccc
Q 019042          228 IDIYFENVGGK---------------M---------------LDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       228 ~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      +|+++++.|..               .               .+.+...++.+|++|.+++...
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            99999988631               0               1223345677899998876554

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.33  E-value=0.00077  Score=56.11  Aligned_cols=102  Identities=13%  Similarity=0.040  Sum_probs=70.2

Q ss_pred             HHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHH
Q 019042          147 GGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRC  223 (347)
Q Consensus       147 ~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~  223 (347)
                      ..+.+..++++|++||=+|  .|.|..++.+|+..|++|++++.+++..+.+++.   .|...-+..... |+    +. 
T Consensus        52 ~~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~----~~-  123 (285)
T d1kpga_          52 DLALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQ-  123 (285)
T ss_dssp             HHHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GG-
T ss_pred             HHHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hh----hc-
Confidence            3455668999999999999  4789999999999999999999999988877632   222111111111 21    11 


Q ss_pred             CCCCccEEEE-----CCCc----hhHHHHHHhhccCCEEEEE
Q 019042          224 FPEGIDIYFE-----NVGG----KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       224 ~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~  256 (347)
                      .++.+|.|+.     ..+.    ..+..+.++|+|+|++++-
T Consensus       124 ~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         124 FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence            1346887754     3332    2567788899999999853

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.00072  Score=51.74  Aligned_cols=104  Identities=11%  Similarity=-0.011  Sum_probs=65.4

Q ss_pred             HHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC
Q 019042          147 GGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       147 ~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      .+|.+..-..+|++|+|.|+ ||.+.+++.-+...|++++++.|+.++.+.+.+.+.....+.....++       ....
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-------~~~~   78 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE-------LEGH   78 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-------GTTC
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc-------cccc
Confidence            34544333457899999996 999999999999999999999999998777764554321111111101       1112


Q ss_pred             CccEEEECCCchhH----HHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFENVGGKML----DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~~g~~~~----~~~~~~l~~~G~~v~~g~  258 (347)
                      .+|++|+|+.....    ..-...++++..+..+-.
T Consensus        79 ~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY  114 (170)
T d1nyta1          79 EFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFY  114 (170)
T ss_dssp             CCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             ccceeecccccCcccCCCCCcHHHhccCcEEEEeec
Confidence            58999999853211    111234566666655543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=9e-05  Score=58.90  Aligned_cols=96  Identities=16%  Similarity=0.160  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .++|+|+||+|.+|..++..+...|.+|+++++++++..... ..+... ..|..+.+++.+.+.     ++|+||.+.|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~~~l~~al~-----~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-----GQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-----TCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccchhhHHHHhc-----CCCEEEEEec
Confidence            368999999999999999988889999999999988754332 233321 123333322323322     4899999987


Q ss_pred             ch-----------hHHHHHHhhccCC--EEEEEccc
Q 019042          237 GK-----------MLDAVLLNMRIHG--RIAVCGMI  259 (347)
Q Consensus       237 ~~-----------~~~~~~~~l~~~G--~~v~~g~~  259 (347)
                      ..           .....++.++..|  +++.++..
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~  112 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence            42           1234455555543  77777653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.30  E-value=0.00078  Score=55.32  Aligned_cols=82  Identities=17%  Similarity=0.180  Sum_probs=55.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHH-------HHHHHHHHhCCC---eeEecCChhhHHHHHHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKE-------KVNLLKNKFGFD---DAFNYKKEPDLDAALKR  222 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~-------~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~  222 (347)
                      .++|+.++||+||+|++|++.+..+...|+ +|+.+.++..       ..+.++ ..|..   ...|..+.++..+.+..
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence            568889999999999999999999988999 6777776532       122333 45653   12344554344444444


Q ss_pred             HCCC-CccEEEECCC
Q 019042          223 CFPE-GIDIYFENVG  236 (347)
Q Consensus       223 ~~~~-~~d~vid~~g  236 (347)
                      +... .+|.++.+.|
T Consensus        84 i~~~~~i~~vv~~ag   98 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAA   98 (259)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             ccccccccccccccc
Confidence            4333 6899999888

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00027  Score=57.65  Aligned_cols=107  Identities=15%  Similarity=0.148  Sum_probs=72.3

Q ss_pred             HHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHH
Q 019042          145 AYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALK  221 (347)
Q Consensus       145 A~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~  221 (347)
                      -+..|....++.+|++||=+|.  |.|..+..+++..|++|++++.++.-.+.+++   ..|....+..... |+.+.  
T Consensus        21 ~~~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~~~~--   95 (245)
T d1nkva_          21 KYATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAGY--   95 (245)
T ss_dssp             HHHHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTTC--
T ss_pred             HHHHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HHhhc--
Confidence            3445667789999999999994  56777888888889999999999987766653   2354321221111 22111  


Q ss_pred             HHCCCCccEEEECCC-----c--hhHHHHHHhhccCCEEEEEc
Q 019042          222 RCFPEGIDIYFENVG-----G--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       222 ~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                       ...+.+|+|+..-.     .  ..+....+.|+|+|+++...
T Consensus        96 -~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 -VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             -CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             -cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence             12237999885322     1  36778888999999998753

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00078  Score=56.21  Aligned_cols=102  Identities=18%  Similarity=0.211  Sum_probs=63.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEE---EEeCCHHH---HHHHHHHhCC---C---eeEecCChhhHHHHHHHHCCCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVV---GSAGSKEK---VNLLKNKFGF---D---DAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~---~~~~~~~~---~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      .|||+||++|+|.+.+..+...|++|+   .+.++.++   +....+++..   .   ...|..+.++..+.+.+...+.
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence            568999999999999999999998644   44444332   2222213322   1   1245555535555555554558


Q ss_pred             ccEEEECCCch--------------------------hHHHHHHhhcc--CCEEEEEccccc
Q 019042          228 IDIYFENVGGK--------------------------MLDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       228 ~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      +|+++.+.|..                          ..+.++..|+.  +|++|.+++..+
T Consensus        84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g  145 (285)
T d1jtva_          84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG  145 (285)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence            99999988731                          12345555533  699999887654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.25  E-value=7.5e-05  Score=61.50  Aligned_cols=100  Identities=16%  Similarity=0.096  Sum_probs=66.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----CCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG----FDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      ++||+||++++|++.++.+...|++|++..++.++.+.++ ..+    ...+.+..+..++.+.+.+.. +++|+++.+.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEEEECC
Confidence            7899999999999999999999999999998877766665 332    223333332212333333332 3699999877


Q ss_pred             Cch------------h---------------HHHHHHhhcc--CCEEEEEccccc
Q 019042          236 GGK------------M---------------LDAVLLNMRI--HGRIAVCGMISQ  261 (347)
Q Consensus       236 g~~------------~---------------~~~~~~~l~~--~G~~v~~g~~~~  261 (347)
                      |..            .               .+.++..|+.  +|++|.+++...
T Consensus        80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~  134 (252)
T d1zmta1          80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  134 (252)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence            621            0               1334455543  699999987554

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.25  E-value=0.00058  Score=56.60  Aligned_cols=81  Identities=11%  Similarity=0.117  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhCCCe--eEecCChhhHHHHHHHHCC--C
Q 019042          156 KKGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKE---KVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~  226 (347)
                      -+|+++||+||+|  |+|.+.++.+...|++|+++.++++   +.+.+.++.+...  ..|..+..+..+.+.+...  +
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            4689999999876  8999999999999999999998764   3333332333222  2333333233333333222  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      .+|+++.+.|
T Consensus        83 ~id~lV~nag   92 (274)
T d2pd4a1          83 SLDFIVHSVA   92 (274)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCeEEeecc
Confidence            6999999887

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.0005  Score=55.22  Aligned_cols=97  Identities=19%  Similarity=0.172  Sum_probs=65.9

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh---CC-----Cee-EecCChhhHHHHHH
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF---GF-----DDA-FNYKKEPDLDAALK  221 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~---g~-----~~v-i~~~~~~~~~~~i~  221 (347)
                      ..+++|++||-.|  .|.|..++.+|+..|  .+|+++..+++-.+.+++.+   +.     ..+ +-..   |......
T Consensus        72 ~~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g---D~~~~~~  146 (224)
T d1i1na_          72 DQLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---DGRMGYA  146 (224)
T ss_dssp             TTSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---CGGGCCG
T ss_pred             hccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe---ecccccc
Confidence            3789999999999  577899999998875  49999999988776665332   21     111 1011   1100000


Q ss_pred             HHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          222 RCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       222 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      .  .+.||.|+.+..- ......++.|++||++|..
T Consensus       147 ~--~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         147 E--EAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             G--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             h--hhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            0  1269999877665 4567889999999999874

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.17  E-value=0.00025  Score=58.02  Aligned_cols=78  Identities=12%  Similarity=0.184  Sum_probs=51.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHH---HCCCEEEEEeCCHHHHHHHHH--HhCCC---eeEecCChhhHHHHHH---HHCC-C
Q 019042          159 EYVYVSAASGAVGQLVGQFAK---LVGCYVVGSAGSKEKVNLLKN--KFGFD---DAFNYKKEPDLDAALK---RCFP-E  226 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~---~~G~~V~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~---~~~~-~  226 (347)
                      ++|||+||++|+|.+.++.+.   +.|++|+++++++++.+.+++  +.+..   ..+|..+.++..+.+.   .... +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            479999999999998886554   358999999999876655541  12221   2244445424443333   3322 3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ++|+++.+.|
T Consensus        83 ~iDiLvnNAg   92 (248)
T d1snya_          83 GLNVLFNNAG   92 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CcceEEeecc
Confidence            7999999987

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.13  E-value=0.0032  Score=48.07  Aligned_cols=97  Identities=13%  Similarity=0.043  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +++|+|.|+ |.+|..+++.+...|.+|+++.++.++.+.+.+.++...+. .... +......... ...|.++.+...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~-~~~~-~~~~~~~~~i-~~~~~~i~~~~~   77 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPI-SLDV-NDDAALDAEV-AKHDLVISLIPY   77 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEE-ECCT-TCHHHHHHHH-TTSSEEEECSCG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccc-cccc-cchhhhHhhh-hccceeEeeccc
Confidence            578999996 99999999999999999999999999988887455543222 2221 1111111111 136888887766


Q ss_pred             -hhHHHHHHhhccCCEEEEEcc
Q 019042          238 -KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       238 -~~~~~~~~~l~~~G~~v~~g~  258 (347)
                       ........+++.+..++....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~   99 (182)
T d1e5qa1          78 TFHATVIKSAIRQKKHVVTTSY   99 (182)
T ss_dssp             GGHHHHHHHHHHHTCEEECSSC
T ss_pred             hhhhHHHHHHHhhccceeeccc
Confidence             355555566677777766543

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.13  E-value=0.0012  Score=54.83  Aligned_cols=103  Identities=15%  Similarity=0.118  Sum_probs=69.5

Q ss_pred             HHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHH
Q 019042          146 YGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       146 ~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~  222 (347)
                      +.-+.+..++++|++||=+|.  |.|..+..+++..|++|++++.+++..+.+++.   .|....+..... ++    + 
T Consensus        41 ~~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~----~-  112 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----E-  112 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----G-
T ss_pred             HHHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hh----h-
Confidence            444556679999999999993  566678888888899999999999988777643   233211111111 21    1 


Q ss_pred             HCCCCccEEEE-----CCCch----hHHHHHHhhccCCEEEEE
Q 019042          223 CFPEGIDIYFE-----NVGGK----MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       223 ~~~~~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~  256 (347)
                      ..++.+|.|+.     ..+.+    .++...++|+|+|++++-
T Consensus       113 ~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         113 DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            12346888853     33322    477788999999999864

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.12  E-value=0.00033  Score=56.19  Aligned_cols=98  Identities=15%  Similarity=0.140  Sum_probs=61.8

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC---C----CEEEEEeCCHHHHHHHHHHh--------CCCeeEecCChhhHH
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV---G----CYVVGSAGSKEKVNLLKNKF--------GFDDAFNYKKEPDLD  217 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~---G----~~V~~~~~~~~~~~~~~~~~--------g~~~vi~~~~~~~~~  217 (347)
                      ..+++|++||.+|.  |.|..++.+++..   |    .+|+.+...++-.+.+++.+        +...+.....  |..
T Consensus        76 ~~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~--d~~  151 (223)
T d1r18a_          76 DHLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG--DGR  151 (223)
T ss_dssp             TTCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES--CGG
T ss_pred             hccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEec--ccc
Confidence            37899999999994  5677766666654   4    38999999887666554221        2222211111  111


Q ss_pred             HHHHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          218 AALKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       218 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      +...  ..+.||.|+-+.+- ......++.|++||++|..
T Consensus       152 ~~~~--~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         152 KGYP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             GCCG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccc--cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            1110  01269988876665 4557788899999999874

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.03  E-value=0.0017  Score=50.26  Aligned_cols=100  Identities=20%  Similarity=0.228  Sum_probs=67.4

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCC-eeEecCChhhHHHHHHHHCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFD-DAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ...++++|++||=.|+  |.|..++.+|+. +.+|++++.+++..+.+++   +.|.. .+ ..... +..+....  ..
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v-~~~~g-da~~~~~~--~~   99 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEG-DAPEALCK--IP   99 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEES-CHHHHHTT--SC
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcce-EEEEC-chhhcccc--cC
Confidence            3468899999999984  566777777764 5699999999987777764   34542 22 11111 33333221  13


Q ss_pred             CccEEEECCCc----hhHHHHHHhhccCCEEEEEc
Q 019042          227 GIDIYFENVGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       227 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+|+++.....    ..++.+.+.|+++|+++...
T Consensus       100 ~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         100 DIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             CEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            69999865543    26778888999999988654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.94  E-value=0.0046  Score=47.40  Aligned_cols=90  Identities=16%  Similarity=0.103  Sum_probs=61.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-------EecCC--hhhHHHHHHHHCCCCc
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-------FNYKK--EPDLDAALKRCFPEGI  228 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-------i~~~~--~~~~~~~i~~~~~~~~  228 (347)
                      +.++.|+|+ |.+|++.+..+...|.+|.+.++++++.+.++ +.+....       .....  ..+..+.+.     .+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~a   73 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DA   73 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEESCHHHHHT-----TC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CC
Confidence            368999996 99999999999999999999999999988887 5543111       00000  013334343     38


Q ss_pred             cEEEECCCchhHHHHHH----hhccCCEEE
Q 019042          229 DIYFENVGGKMLDAVLL----NMRIHGRIA  254 (347)
Q Consensus       229 d~vid~~g~~~~~~~~~----~l~~~G~~v  254 (347)
                      |++|-++........++    ++.++-.++
T Consensus        74 D~iii~v~~~~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          74 DVILIVVPAIHHASIAANIASYISEGQLII  103 (184)
T ss_dssp             SEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred             CEEEEEEchhHHHHHHHHhhhccCCCCEEE
Confidence            99999998765555544    444444443

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00074  Score=57.22  Aligned_cols=103  Identities=17%  Similarity=0.205  Sum_probs=67.3

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC--------------CCeeEecCChh
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFG--------------FDDAFNYKKEP  214 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g--------------~~~vi~~~~~~  214 (347)
                      ...+++||++||=.|.  |.|.+++.+|+..|.  +|+.+..+++..+.+++.+-              .+. ++.... 
T Consensus        92 ~~l~i~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~n-v~~~~~-  167 (324)
T d2b25a1          92 SMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN-VDFIHK-  167 (324)
T ss_dssp             HHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC-EEEEES-
T ss_pred             HHhCCCCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccc-eeEEec-
Confidence            4579999999999884  569999999999864  89999999998887764321              011 111111 


Q ss_pred             hHHHHHHHHCCCCccEEEECCCc--hhHHHHHHhhccCCEEEEEc
Q 019042          215 DLDAALKRCFPEGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       215 ~~~~~i~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      |+......+..+.+|.||--...  ..+..+.+.|+|||+++.+.
T Consensus       168 di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         168 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            11111111112257877644443  47899999999999999764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.93  E-value=0.0012  Score=54.14  Aligned_cols=80  Identities=16%  Similarity=0.150  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHH-H--HCCCEEEEEeCCHHHHHHHHHHhC---C-Ce----eEecCChhhHHHH---HHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFA-K--LVGCYVVGSAGSKEKVNLLKNKFG---F-DD----AFNYKKEPDLDAA---LKR  222 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla-~--~~G~~V~~~~~~~~~~~~~~~~~g---~-~~----vi~~~~~~~~~~~---i~~  222 (347)
                      +|+.++|+||++|+|.+.++.+ +  ..|++|+++.+++++++.+.+++.   . ..    ..|..+.++..+.   +.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            5788999999999998877655 4  259999999999998877654442   1 12    2344444233333   333


Q ss_pred             HC--CC-CccEEEECCC
Q 019042          223 CF--PE-GIDIYFENVG  236 (347)
Q Consensus       223 ~~--~~-~~d~vid~~g  236 (347)
                      ..  .+ ..|+++.+.|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence            22  12 5788888765

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0057  Score=45.71  Aligned_cols=101  Identities=17%  Similarity=0.183  Sum_probs=72.9

Q ss_pred             hHHHHhhhhcC-CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHH
Q 019042          144 TAYGGLYELCS-PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       144 tA~~~l~~~~~-~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~  222 (347)
                      +.+.++.+..+ .-.|++++|.| .|-+|.-.++.++..|++|+++...+.+.-.+. .-|. .+.      .+.+.+. 
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~-~v~------~~~~a~~-   78 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGY-EVT------TMDEACQ-   78 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTC-EEC------CHHHHTT-
T ss_pred             hHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCce-Eee------ehhhhhh-
Confidence            34455544433 45799999999 699999999999999999999999987643333 2333 222      2222322 


Q ss_pred             HCCCCccEEEECCCch--hHHHHHHhhccCCEEEEEcc
Q 019042          223 CFPEGIDIYFENVGGK--MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       223 ~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  258 (347)
                          ..|+++-+.|..  .-.+-++.||++-.+..+|.
T Consensus        79 ----~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          79 ----EGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             ----TCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSS
T ss_pred             ----hccEEEecCCCccchhHHHHHhccCCeEEEEecc
Confidence                379999999974  45677789999988888875

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.90  E-value=0.0027  Score=49.21  Aligned_cols=98  Identities=14%  Similarity=0.025  Sum_probs=66.0

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-----------------EecCChh
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-----------------FNYKKEP  214 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-----------------i~~~~~~  214 (347)
                      ...+.+|++||..|.  |.|..+..+|++ |++|++++.+++-.+.+++..+....                 +..+-. 
T Consensus        15 ~l~~~~~~rvLd~GC--G~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-   90 (201)
T d1pjza_          15 SLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF-   90 (201)
T ss_dssp             HHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS-
T ss_pred             HcCCCCCCEEEEecC--cCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc-
Confidence            357889999999994  678889988874 99999999999999888854432111                 000000 


Q ss_pred             hHHHHHHHHCCCCccEEEECCCc---------hhHHHHHHhhccCCEEEEEc
Q 019042          215 DLDAALKRCFPEGIDIYFENVGG---------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       215 ~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ++.....    ..+|.|++...-         ..+....+.|+++|+++...
T Consensus        91 ~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          91 ALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             ccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            1111111    148998875441         25677888999999987654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.89  E-value=0.0088  Score=43.20  Aligned_cols=75  Identities=17%  Similarity=0.144  Sum_probs=55.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      +|+|.|+ |.+|+..++.+...|.+|++++.++++.+.++++++.. ++..+.  .-.+.+.+..-..+|.++-++.++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~--~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDC--TKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCT--TSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcc--cchhhhhhcChhhhhhhcccCCcH
Confidence            6899996 99999999999999999999999999998887566653 443222  112334443323689999988875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.89  E-value=0.0026  Score=52.27  Aligned_cols=82  Identities=12%  Similarity=0.222  Sum_probs=55.7

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhCCCe---eEecCChh---hHHHHHHHHCC
Q 019042          155 PKKGEYVYVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKEKV-NLLKNKFGFDD---AFNYKKEP---DLDAALKRCFP  225 (347)
Q Consensus       155 ~~~~~~vlI~ga~--g~vG~~a~qla~~~G~~V~~~~~~~~~~-~~~~~~~g~~~---vi~~~~~~---~~~~~i~~~~~  225 (347)
                      +-+|+++||+||+  .|+|.+.++-+...|++|+.+.++.++. +.+.++++...   ..|..+.+   ++.+.+.+...
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            4578999999964  4799999999999999999999887765 43443555432   23333321   23344444333


Q ss_pred             --CCccEEEECCC
Q 019042          226 --EGIDIYFENVG  236 (347)
Q Consensus       226 --~~~d~vid~~g  236 (347)
                        +.+|+++.+.|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence              26899999987

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.82  E-value=0.0018  Score=52.98  Aligned_cols=81  Identities=11%  Similarity=0.187  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEe--cCChhhHHHHHHHHCC--C
Q 019042          156 KKGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFN--YKKEPDLDAALKRCFP--E  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~--~~~~~~~~~~i~~~~~--~  226 (347)
                      -+|+++||+||+|  |+|.+.+..+...|++|+.+.++++..+.+++   ..+....+.  ..+..+..+.+.+...  +
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            4689999999988  79999999999999999999988664444331   334333222  2222123333333322  3


Q ss_pred             CccEEEECCC
Q 019042          227 GIDIYFENVG  236 (347)
Q Consensus       227 ~~d~vid~~g  236 (347)
                      ..|+.+++.+
T Consensus        83 ~~d~~v~~a~   92 (258)
T d1qsga_          83 KFDGFVHSIG   92 (258)
T ss_dssp             SEEEEEECCC
T ss_pred             ccceEEEeec
Confidence            6899998875

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.82  E-value=0.0015  Score=54.29  Aligned_cols=105  Identities=11%  Similarity=0.087  Sum_probs=69.6

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCC
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~  225 (347)
                      |.....+.++++||=+|+  |.|..+..+++..|++|++++.++...+.+++   ..|...-+..... ++.+ + ....
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~-d~~~-l-~~~~  133 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFLE-I-PCED  133 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTTS-C-SSCT
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccc-cccc-c-cccc
Confidence            334568899999999994  57788888998889999999999887766663   2343211111111 1110 0 0112


Q ss_pred             CCccEEEECCC-----c--hhHHHHHHhhccCCEEEEEcc
Q 019042          226 EGIDIYFENVG-----G--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       226 ~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.+|+|+..-.     .  ..+..+.++|+|+|+++....
T Consensus       134 ~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         134 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            36999976432     1  267889999999999987654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.82  E-value=0.0063  Score=46.79  Aligned_cols=97  Identities=13%  Similarity=0.089  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH---HHhC----C-CeeEecCChhhHHHHHHHHCCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLK---NKFG----F-DDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~---~~~g----~-~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      -++.+|+|.|+ ||.|.+++..+...|+ +++++.+++++.+.+.   ++++    . ..+.+..+..++.+.+.     
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   89 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-----   89 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----
Confidence            36789999995 9999999999999998 7888888765433222   1332    2 12344443323333332     


Q ss_pred             CccEEEECCCch-------hHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFENVGGK-------MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+|++|+|+.-.       .+..-...++++..++.+-.
T Consensus        90 ~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y  128 (182)
T d1vi2a1          90 SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY  128 (182)
T ss_dssp             TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred             ccceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence            389999998621       11111345677888887754

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.79  E-value=0.0031  Score=51.54  Aligned_cols=101  Identities=18%  Similarity=0.123  Sum_probs=70.7

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh----C--CCeeEecCChhhHHHHHHH
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKF----G--FDDAFNYKKEPDLDAALKR  222 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~----g--~~~vi~~~~~~~~~~~i~~  222 (347)
                      ...+++||++||=.|  .|.|.+++.+|+..|  .+|+.++.+++..+.+++.+    +  .+.+-.. .. |..+.  .
T Consensus        90 ~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~-~~-d~~~~--~  163 (264)
T d1i9ga_          90 HEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV-VS-DLADS--E  163 (264)
T ss_dssp             HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE-CS-CGGGC--C
T ss_pred             HHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEE-ec-ccccc--c
Confidence            558999999999988  467999999999986  49999999999888887422    1  1221111 11 21110  1


Q ss_pred             HCCCCccEEEECCCc--hhHHHHHHhhccCCEEEEEc
Q 019042          223 CFPEGIDIYFENVGG--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       223 ~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +..+.+|.||-....  ..+..+.+.|+++|+++++.
T Consensus       164 ~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         164 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            112368987665555  48899999999999998764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.74  E-value=0.0022  Score=51.51  Aligned_cols=103  Identities=16%  Similarity=0.194  Sum_probs=68.5

Q ss_pred             HhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHC
Q 019042          148 GLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       148 ~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      .+...+.+++|++||=+|+  |.|..+..+++. +.+|++++.++.-.+.+++.   .+...+ +.... |..+ + .+.
T Consensus         7 ~l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~-~~~~~-d~~~-~-~~~   79 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENV-RFQQG-TAES-L-PFP   79 (234)
T ss_dssp             HHHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSE-EEEEC-BTTB-C-CSC
T ss_pred             HHHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccc-ccccc-cccc-c-ccc
Confidence            3556789999999999994  678888888774 68999999998876666532   333221 11111 1100 0 011


Q ss_pred             CCCccEEEECCCc-------hhHHHHHHhhccCCEEEEEc
Q 019042          225 PEGIDIYFENVGG-------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       225 ~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+.+|+|+.+-.-       ..++.+.+.|+|+|+++...
T Consensus        80 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          80 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            2369999864432       26888999999999988754

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.71  E-value=0.0032  Score=50.71  Aligned_cols=93  Identities=17%  Similarity=0.096  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      .+.++.+||=.|+  |.|..+..+++ .|++|++++.+++-.+.++ +-+....+..+.. ++     ....+.+|+|+.
T Consensus        39 ~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l-----~~~~~~fD~ii~  108 (246)
T d2avna1          39 YLKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DL-----PFPSGAFEAVLA  108 (246)
T ss_dssp             HCCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SC-----CSCTTCEEEEEE
T ss_pred             hcCCCCEEEEECC--CCchhcccccc-cceEEEEeecccccccccc-ccccccccccccc-cc-----ccccccccceee
Confidence            4457789998883  58888888876 5999999999999999998 6565555544332 32     111237999986


Q ss_pred             CCCc--------hhHHHHHHhhccCCEEEEE
Q 019042          234 NVGG--------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       234 ~~g~--------~~~~~~~~~l~~~G~~v~~  256 (347)
                      ....        ..+....++|++||.++..
T Consensus       109 ~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         109 LGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             CSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            5431        2567888899999998764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.68  E-value=0.0024  Score=51.12  Aligned_cols=71  Identities=23%  Similarity=0.152  Sum_probs=47.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      .+|||+||+|.+|...+..+...|.  .|+.+.+++++.+.+.  -+... ..|..+..++.+.+     .++|.|+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAF-----QGIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHH-----TTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeecccccccccc-----ccceeeEEEE
Confidence            4899999999999999999988885  6778888887655432  12221 22333321222222     2489999887


Q ss_pred             C
Q 019042          236 G  236 (347)
Q Consensus       236 g  236 (347)
                      +
T Consensus        77 ~   77 (252)
T d2q46a1          77 S   77 (252)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0015  Score=52.50  Aligned_cols=100  Identities=8%  Similarity=-0.080  Sum_probs=65.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-CeeEecCChhhHHHHHHHHCCCCccEE-E
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-DDAFNYKKEPDLDAALKRCFPEGIDIY-F  232 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~v-i  232 (347)
                      ..+|.+||-+|  .|.|..+..++++.+.+|++++.++.-.+.+++.... ...+..... +.......+..+.+|.+ +
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-cccccccccccccccceee
Confidence            36788999998  4678888999887777999999999988888843321 111111111 33333333333478887 4


Q ss_pred             ECCCc-----------hhHHHHHHhhccCCEEEEEc
Q 019042          233 ENVGG-----------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       233 d~~g~-----------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      |....           ..+..+.++|+|||+++...
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            65432           14566888999999998654

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=96.60  E-value=0.0071  Score=48.19  Aligned_cols=103  Identities=14%  Similarity=0.069  Sum_probs=71.2

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHH---
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRC---  223 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~---  223 (347)
                      ..+..+.++||=+|  .+.|..++.+|+++  +.+|+.+..+++..+.+++   +.|....+..... +..+.+.++   
T Consensus        54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l~~~  130 (227)
T d1susa1          54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKD  130 (227)
T ss_dssp             HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHC
T ss_pred             HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHHHhc
Confidence            34555678999998  68999999999987  4699999999988777764   3455433333222 344444443   


Q ss_pred             --CCCCccEEEE-CCCc---hhHHHHHHhhccCCEEEEEc
Q 019042          224 --FPEGIDIYFE-NVGG---KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       224 --~~~~~d~vid-~~g~---~~~~~~~~~l~~~G~~v~~g  257 (347)
                        ..+.||+||- +--.   ..+..++++|++||.++.=.
T Consensus       131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             cccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence              2346999864 4333   27889999999999988543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.58  E-value=0.0048  Score=49.18  Aligned_cols=100  Identities=14%  Similarity=0.151  Sum_probs=67.4

Q ss_pred             hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCe--eEecCChhhHHHHHHHHC
Q 019042          150 YELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDD--AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       150 ~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~~  224 (347)
                      .+.++++++++||=+|+  |.|..+..+++ .|++|++++.+++-.+.+++   ..+...  .+..+.. ++     .+.
T Consensus         8 l~~~~l~~~~rVLDiGc--G~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~l-----~~~   78 (231)
T d1vl5a_           8 MQIAALKGNEEVLDVAT--GGGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PFT   78 (231)
T ss_dssp             HHHHTCCSCCEEEEETC--TTCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CSC
T ss_pred             HHhcCCCCcCEEEEecc--cCcHHHHHHHH-hCCEEEEEECCHHHHhhhhhcccccccccccccccccc-cc-----ccc
Confidence            35689999999999994  47777777765 47899999999887666653   234332  2222111 11     111


Q ss_pred             CCCccEEEECCC-----c--hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVG-----G--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+.+|+|+....     +  ..+..+.++|+|||++++...
T Consensus        79 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          79 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            236999986543     2  367889999999999997643

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.58  E-value=0.0065  Score=46.17  Aligned_cols=95  Identities=11%  Similarity=-0.013  Sum_probs=61.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ..++++|+|.|+ ||.+.+++..+...+.+++++.|+.++.+.+.+.++.. .+.....  +      ......+|++|+
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~--~------~~~~~~~diiIN   85 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM--D------SIPLQTYDLVIN   85 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG--G------GCCCSCCSEEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhh--c------cccccccceeee
Confidence            457889999995 99999999888877779999999999888777566531 1111111  1      011125899999


Q ss_pred             CCCchhH----HHHHHhhccCCEEEEEcc
Q 019042          234 NVGGKML----DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       234 ~~g~~~~----~~~~~~l~~~G~~v~~g~  258 (347)
                      |+.....    ......++++..++.+..
T Consensus        86 ~tp~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          86 ATSAGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             CCCC-------CCCHHHHHHCSCEEESCC
T ss_pred             cccccccccccchhhhhhcccceeeeeec
Confidence            9874211    112234566776666543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.53  E-value=0.013  Score=44.06  Aligned_cols=86  Identities=13%  Similarity=0.169  Sum_probs=59.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC-CeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF-DDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      +|.|+|. |.+|...+..++..|.+|++.++++++.+.++ +.|. +...+  +. +   .+     ...|+||-|+...
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~--~~-~---~~-----~~~DiIilavp~~   68 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQ--DL-S---LL-----QTAKIIFLCTPIQ   68 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEES--CG-G---GG-----TTCSEEEECSCHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeee--ec-c---cc-----cccccccccCcHh
Confidence            5889995 99999888888899999999999999989888 7775 33222  11 1   11     2489999888754


Q ss_pred             hH----HHHHHhhccCCEEEEEcc
Q 019042          239 ML----DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       239 ~~----~~~~~~l~~~G~~v~~g~  258 (347)
                      ..    +.....++++-.++.++.
T Consensus        69 ~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          69 LILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhhhhhhhcccccceeeccc
Confidence            33    333334455556655544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.52  E-value=0.014  Score=40.82  Aligned_cols=89  Identities=8%  Similarity=-0.003  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHhCCCeeEe--cCChhhHHHHHHHHCCCCccEEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE--KVNLLKNKFGFDDAFN--YKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~vi~--~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      +|.+|+|.|+ |.+|..-++.+...|++|++++....  ...++. + +....+.  +... ++         .++++|+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~-~~i~~~~~~~~~~-dl---------~~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-E-GMLTLVEGPFDET-LL---------DSCWLAI   77 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-T-TSCEEEESSCCGG-GG---------TTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-c-CCceeeccCCCHH-Hh---------CCCcEEe
Confidence            4789999996 99999999999999999988876443  222222 2 2212222  1111 11         2489999


Q ss_pred             ECCCchhH-HHHHHhhccCCEEEEEcc
Q 019042          233 ENVGGKML-DAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       233 d~~g~~~~-~~~~~~l~~~G~~v~~g~  258 (347)
                      -+.+...+ .......++.|.+|.+..
T Consensus        78 ~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             ecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            99988655 466678889999998765

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.50  E-value=0.0074  Score=49.24  Aligned_cols=35  Identities=14%  Similarity=0.120  Sum_probs=31.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK  194 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~  194 (347)
                      +.||+||++|+|.+.++.+...|++|+.+.++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            67999999999999999999999999999987553

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.47  E-value=0.011  Score=47.94  Aligned_cols=96  Identities=17%  Similarity=0.126  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCCCCccE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      ..++|++||=.|.  |.|.+++.++ ..|++|++++.++.-.+.+++   .-|....+-..   +....   ...+.+|+
T Consensus       117 ~~~~g~~VLDiGc--GsG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d~~~~---~~~~~fD~  187 (254)
T d2nxca1         117 HLRPGDKVLDLGT--GSGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAA---LPFGPFDL  187 (254)
T ss_dssp             HCCTTCEEEEETC--TTSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHHH---GGGCCEEE
T ss_pred             hcCccCEEEEccc--chhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEec---ccccc---ccccccch
Confidence            4678999999994  3466776555 478999999999987777663   23433222111   33222   12247999


Q ss_pred             EEECCCch----hHHHHHHhhccCCEEEEEcc
Q 019042          231 YFENVGGK----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       231 vid~~g~~----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |+.+....    .+....++|+|+|+++..|.
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            99766543    45677789999999998665

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.0019  Score=43.83  Aligned_cols=36  Identities=17%  Similarity=0.088  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      +|++|+|.|. |..|+++++++...|++|++.+.+..
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            5788999996 99999999999999999999997554

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.41  E-value=0.051  Score=39.82  Aligned_cols=96  Identities=19%  Similarity=0.182  Sum_probs=63.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HH-HHHHHHhCCCeeEecCChhhHH---HH-----------
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKE--KV-NLLKNKFGFDDAFNYKKEPDLD---AA-----------  219 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~--~~-~~~~~~~g~~~vi~~~~~~~~~---~~-----------  219 (347)
                      ++|.|.|++|.+|..+.++.+..  .++|++++...+  .+ +.++ +|....+.-.++. ...   +.           
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~-ef~Pk~v~i~d~~-~~~~l~~~~~~~~~~v~~g   80 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK-RTNAKRAVIADPS-LYNDLKEALAGSSVEAAAG   80 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH-HTTCSEEEESCGG-GHHHHHHHTTTCSSEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH-hhccccceeccHH-HHHHHHHHhhhcccccccC
Confidence            68999999999999999999987  568877764433  33 3344 7877665433321 111   11           


Q ss_pred             ---HHHHCCCCccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          220 ---LKRCFPEGIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       220 ---i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                         +.++....+|+++.+..+ ..+.-.+..++.+-++.+.
T Consensus        81 ~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          81 ADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             ccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence               111111247899888755 7888888888888775543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.29  E-value=0.0076  Score=50.10  Aligned_cols=38  Identities=11%  Similarity=0.180  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Q 019042          157 KGEYVYVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKEK  194 (347)
Q Consensus       157 ~~~~vlI~ga~g--~vG~~a~qla~~~G~~V~~~~~~~~~  194 (347)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            689999999876  89999999999999999999876543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.28  E-value=0.021  Score=42.35  Aligned_cols=99  Identities=20%  Similarity=0.177  Sum_probs=72.2

Q ss_pred             HHHhhhhc-CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC
Q 019042          146 YGGLYELC-SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       146 ~~~l~~~~-~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~  224 (347)
                      +.++.+.. -+-.|++++|.| -|-+|.-.++-++.+|++|+++..++-+.-.+. --|. .+.      ...+.+.   
T Consensus        10 ~d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf-~v~------~~~~a~~---   77 (163)
T d1v8ba1          10 PDGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGF-NVV------TLDEIVD---   77 (163)
T ss_dssp             HHHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTC-EEC------CHHHHTT---
T ss_pred             HHHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCC-ccC------chhHccc---
Confidence            34444433 346899999999 699999999999999999999999997643332 1222 232      2333332   


Q ss_pred             CCCccEEEECCCch--hHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIYFENVGGK--MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  258 (347)
                        ..|+++-++|..  .-..-++.||.+..+..+|.
T Consensus        78 --~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GH  111 (163)
T d1v8ba1          78 --KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGH  111 (163)
T ss_dssp             --TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             --cCcEEEEcCCCCccccHHHHHHhhCCeEEEeccc
Confidence              379999999984  35667889999999988876

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.28  E-value=0.0045  Score=51.15  Aligned_cols=39  Identities=18%  Similarity=0.146  Sum_probs=31.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KEKVNLL  198 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~-~~~~~~~  198 (347)
                      .++|+||++|+|.+.++.+...|++|+++.++ +++.+.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~   43 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   43 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence            56899999999999999999999999987764 4444433

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.26  E-value=0.018  Score=42.68  Aligned_cols=87  Identities=11%  Similarity=0.150  Sum_probs=65.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchh
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM  239 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  239 (347)
                      +|.++| +|.+|.+.+.-....|.++++..++.++.+.+.+++|...+-      +..+.+.     ..|+||=|+-...
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~-----~~dvIilavkp~~   69 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLID-----QVDLVILGIKPQL   69 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHH-----TCSEEEECSCGGG
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhh-----ccceeeeecchHh
Confidence            578899 599999888877777899999999999888876578865321      2333333     3899999997777


Q ss_pred             HHHHHHhhccCCEEEEEcc
Q 019042          240 LDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~  258 (347)
                      +...+..++++..++++..
T Consensus        70 ~~~vl~~l~~~~~iis~~a   88 (152)
T d2ahra2          70 FETVLKPLHFKQPIISMAA   88 (152)
T ss_dssp             HHHHHTTSCCCSCEEECCT
T ss_pred             HHHHhhhcccceeEecccc
Confidence            8888888888877776543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.02  Score=44.23  Aligned_cols=40  Identities=25%  Similarity=0.223  Sum_probs=35.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      ++|.|+|+ |.+|...++++...|.+|+..+.+++.++.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            47999996 99999999999999999999999988665554

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.22  E-value=0.0052  Score=52.31  Aligned_cols=47  Identities=30%  Similarity=0.274  Sum_probs=40.5

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      .-+.+|++|||+||+|-+|...+..+...|.+|++++++.++.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            45677999999999999999999888888999999999887766554

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.20  E-value=0.021  Score=42.23  Aligned_cols=83  Identities=20%  Similarity=0.287  Sum_probs=57.4

Q ss_pred             EEEEEcCCChHHHHHHH-HHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          160 YVYVSAASGAVGQLVGQ-FAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~q-la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      +|.++|+ |.+|.+.++ ++++-+.+|++..+++++.+.+.+++|.. +.+..+  +    +     ...|+||=|+-..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~--~----v-----~~~Div~lavkP~   68 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP--E----L-----HSDDVLILAVKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC--C----C-----CTTSEEEECSCHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc--c----c-----cccceEEEecCHH
Confidence            5889995 999998777 44544479999999999988887567763 222111  1    1     1378888888766


Q ss_pred             hHHHHHHhhccCCEEEE
Q 019042          239 MLDAVLLNMRIHGRIAV  255 (347)
Q Consensus       239 ~~~~~~~~l~~~G~~v~  255 (347)
                      .+...++-+++.++++.
T Consensus        69 ~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          69 DMEAACKNIRTNGALVL   85 (152)
T ss_dssp             HHHHHHTTCCCTTCEEE
T ss_pred             HHHHhHHHHhhcccEEe
Confidence            66777776766665543

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.012  Score=46.47  Aligned_cols=104  Identities=13%  Similarity=0.044  Sum_probs=70.7

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHH--
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRC--  223 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~--  223 (347)
                      ...+..+.++||=+|  .+.|..++.+|+.+  +.+|+.+..+++..+.+++   ..|....+..... +..+.+.++  
T Consensus        53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~~~  129 (219)
T d2avda1          53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA  129 (219)
T ss_dssp             HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhhhh
Confidence            345566678999998  67899999999886  5699999999987766663   3355433333222 333333332  


Q ss_pred             --CCCCccEEEECCCc----hhHHHHHHhhccCCEEEEEc
Q 019042          224 --FPEGIDIYFENVGG----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       224 --~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                        ..+.+|+||--...    ..+..++++|++||.++.=.
T Consensus       130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn  169 (219)
T d2avda1         130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  169 (219)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence              23379988654433    26789999999999988643

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.08  E-value=0.0069  Score=48.30  Aligned_cols=102  Identities=16%  Similarity=0.142  Sum_probs=67.7

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHhCC-C--eeEecCChhhHHHHHHHHCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKEKVNLLKNKFGF-D--DAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~~~~~~~~~~~g~-~--~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....++||++||=.|+  |.|..+..+++..|  .+|++++.++...+.+++.... .  ..+..+.  ....... ...
T Consensus        67 ~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~--~~~~~~~-~~~  141 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA--TKPEEYR-ALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT--TCGGGGT-TTC
T ss_pred             cccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC--CCccccc-ccc
Confidence            3358899999999995  56888999999886  4999999999988877743322 1  1111211  1111111 111


Q ss_pred             CCccEEEECCCc-----hhHHHHHHhhccCCEEEEEc
Q 019042          226 EGIDIYFENVGG-----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       226 ~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ..+|+++.....     ..+..+.+.|+++|+++++-
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence            257888765532     15778888999999998763

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.07  E-value=0.016  Score=50.17  Aligned_cols=104  Identities=23%  Similarity=0.316  Sum_probs=66.6

Q ss_pred             hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---h-------CC--C-eeEecCChhh
Q 019042          150 YELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNK---F-------GF--D-DAFNYKKEPD  215 (347)
Q Consensus       150 ~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~---~-------g~--~-~vi~~~~~~~  215 (347)
                      .+..++++|++++=+|  +|+|..+.++|+..|+ +|++++-++...+.+++.   +       |.  . ..+..... .
T Consensus       209 l~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~-f  285 (406)
T d1u2za_         209 YQQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS-F  285 (406)
T ss_dssp             HHHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC-S
T ss_pred             HHHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeec-h
Confidence            3567999999999998  6899999999999987 899999998876666521   1       11  0 11111110 1


Q ss_pred             HH-HHHHHHCCCCccEEEECCC---c---hhHHHHHHhhccCCEEEEEc
Q 019042          216 LD-AALKRCFPEGIDIYFENVG---G---KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       216 ~~-~~i~~~~~~~~d~vid~~g---~---~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +. ....... ..+|+++-...   .   ..+....+.|++||++|..-
T Consensus       286 ~~~~~~d~~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         286 VDNNRVAELI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             TTCHHHHHHG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             hhcccccccc-ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            10 1111111 13778775321   1   25677888999999999754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.04  E-value=0.025  Score=40.70  Aligned_cols=72  Identities=18%  Similarity=0.147  Sum_probs=52.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-EecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-FNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +++|.|. |.+|+.+++.+...|.+|++++.++++.+.++ +.+...+ .|..+. +.   +.+..-..+|.++-+.++
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~~---l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-NE---LLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-TH---HHHHTGGGCSEEEECCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-hh---hhccCCccccEEEEEcCc
Confidence            4788885 99999999999999999999999999999888 6665332 233333 33   332211258888887775

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.04  E-value=0.09  Score=38.47  Aligned_cols=95  Identities=14%  Similarity=0.096  Sum_probs=62.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCH--HHH-HHHHHHhCCCeeEecCChhhH---HHH------------
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSK--EKV-NLLKNKFGFDDAFNYKKEPDL---DAA------------  219 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~--~~~-~~~~~~~g~~~vi~~~~~~~~---~~~------------  219 (347)
                      +|.|.|++|.+|..+..+.+..  .++|.+.+...  +.+ +.++ +|....++-.++. .+   .+.            
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~-~f~pk~v~i~d~~-~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCL-EFSPRYAVMDDEA-SAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHH-HHCCSEEEESSHH-HHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHH-HHhhcccccccHH-HHHHHHHHhhhhcccccccc
Confidence            6899999999999999999987  46877776443  333 3333 7887765544332 21   111            


Q ss_pred             ----HHHHCCC-CccEEEECCCc-hhHHHHHHhhccCCEEEEE
Q 019042          220 ----LKRCFPE-GIDIYFENVGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       220 ----i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                          +.++... .+|+|+.+..+ ..+.-.+..++.+-++.+.
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence                1222222 58999998866 7888888888887665433

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.96  E-value=0.024  Score=47.81  Aligned_cols=38  Identities=3%  Similarity=-0.037  Sum_probs=31.7

Q ss_pred             CCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCCHHHH
Q 019042          158 GEYVYVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKEKV  195 (347)
Q Consensus       158 ~~~vlI~ga--~g~vG~~a~qla~~~G~~V~~~~~~~~~~  195 (347)
                      ++..||+|+  +.|+|.+.++.+...|++|+.+.++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence            567899994  45999999999999999999988766543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.92  E-value=0.0029  Score=54.08  Aligned_cols=78  Identities=17%  Similarity=0.250  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----CCe-eEecCChhhHHHHHHHHCCCCccEE
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFG----FDD-AFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g----~~~-vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +|++|||+||+|-+|..+++.+...|.+|+++++...+...+.+...    ... ..|..+.+.+.+.+...   .+|++
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~---~~~~v   83 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIV   83 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc---hhhhh
Confidence            57899999999999999999999999999999986543221110211    111 12333331233333322   57899


Q ss_pred             EECCCc
Q 019042          232 FENVGG  237 (347)
Q Consensus       232 id~~g~  237 (347)
                      +.+++.
T Consensus        84 ~~~aa~   89 (356)
T d1rkxa_          84 FHMAAQ   89 (356)
T ss_dssp             EECCSC
T ss_pred             hhhhcc
Confidence            988874

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.88  E-value=0.018  Score=44.61  Aligned_cols=86  Identities=21%  Similarity=0.205  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|...+++++..|++|++.++.......   ..+..    .  . ++.+.+.+     .|+++-+..
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~~----~--~-~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGYY----V--D-SLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTCB----C--S-CHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc---cceee----e--c-cccccccc-----cccccccCC
Confidence            488999999 5999999999999999999999876543221   11211    1  1 45555554     799888765


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      . +     .-...++.|+++..+|.++-
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHHhhhCCccEEEecCc
Confidence            3 1     22567788999988887764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.018  Score=45.76  Aligned_cols=103  Identities=15%  Similarity=0.101  Sum_probs=66.9

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCee-------------------EecC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDA-------------------FNYK  211 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-------------------i~~~  211 (347)
                      ....+.++.+||..|.  |.|..+..+|+ .|++|++++-|+.-.+.++++.+....                   ++..
T Consensus        39 ~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            3356788999999984  55888888876 699999999999988887744432110                   0100


Q ss_pred             ChhhHHHHHHHHCCCCccEEEECCCc---------hhHHHHHHhhccCCEEEEEcc
Q 019042          212 KEPDLDAALKRCFPEGIDIYFENVGG---------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .. |+.. +.....+.+|+|+++..-         ..+....++|+|+|++++...
T Consensus       116 ~~-d~~~-l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         116 CC-SIFD-LPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             ES-CGGG-GGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             Ec-chhh-ccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            00 1100 000111268999987631         256788899999999876654

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.044  Score=46.12  Aligned_cols=101  Identities=19%  Similarity=0.238  Sum_probs=67.8

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----------HhCCC----eeE--ecC
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKN----------KFGFD----DAF--NYK  211 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~----------~~g~~----~vi--~~~  211 (347)
                      +.+..+++++++|+=.|  .|.|..+.++|+..++ ++++++-+++..+.+++          .+|..    ..+  |..
T Consensus       143 ~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            44667999999999998  5789999999999987 79999999876665542          12221    122  222


Q ss_pred             ChhhHHHHHHHHCCCCccEEEECCC--c----hhHHHHHHhhccCCEEEEEc
Q 019042          212 KEPDLDAALKRCFPEGIDIYFENVG--G----KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       212 ~~~~~~~~i~~~~~~~~d~vid~~g--~----~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +. ++.+.+.+     +|+|+-..-  .    ..+....+.|++||++|+.-
T Consensus       221 ~~-~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SE-EWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SH-HHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cc-ccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            22 33333332     678874322  1    14566777899999999764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.71  E-value=0.041  Score=41.30  Aligned_cols=89  Identities=10%  Similarity=0.074  Sum_probs=62.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|+|+| .|.+|...+..+++.|.  +|++.+++++..+.++ +.+.. ......+  .       ......|+++-|+.
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~--~-------~~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIA--K-------VEDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGG--G-------GGGTCCSEEEECSC
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhh--h-------hhccccccccccCC
Confidence            699999 59999999998988885  8999999999999998 77763 3222111  1       00114788888887


Q ss_pred             ch----hHHHHHHhhccCCEEEEEccc
Q 019042          237 GK----MLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       237 ~~----~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      ..    .+....+.++++-.++.++..
T Consensus        72 ~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             chhhhhhhhhhhccccccccccccccc
Confidence            54    344455566777777777653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.68  E-value=0.0046  Score=49.69  Aligned_cols=37  Identities=19%  Similarity=0.145  Sum_probs=33.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEK  194 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~  194 (347)
                      ++++||+||++++|.+.++.+...|++|+++.++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            3688999999999999999999999999999987653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.67  E-value=0.21  Score=36.32  Aligned_cols=78  Identities=10%  Similarity=-0.030  Sum_probs=54.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCC--CccEEEECCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPE--GIDIYFENVG  236 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~--~~d~vid~~g  236 (347)
                      .+|.|+|+.|.+|...+..++..|.+|.+.+++........ .-+++.++...........+.++.+.  .=.+++|++.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            47999997799999999999999999999998776544443 45666665554432444445544432  2258888886


Q ss_pred             c
Q 019042          237 G  237 (347)
Q Consensus       237 ~  237 (347)
                      .
T Consensus        89 v   89 (152)
T d2pv7a2          89 V   89 (152)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=95.66  E-value=0.019  Score=48.12  Aligned_cols=74  Identities=15%  Similarity=0.236  Sum_probs=47.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHHhCCCee--EecCChhhHHHHHHHHCCCCccEEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAG-----SKEKVNLLKNKFGFDDA--FNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~-----~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      +|||+||+|-+|...+..+...|.+|+++++     ..++...+. ..+--..  .|..+.+++.+.+...   ++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~---~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc---CCceEE
Confidence            6999999999999999999889999999862     222333343 3332222  2333332344444332   589999


Q ss_pred             ECCCc
Q 019042          233 ENVGG  237 (347)
Q Consensus       233 d~~g~  237 (347)
                      .+++.
T Consensus        78 h~aa~   82 (338)
T d1orra_          78 HLAGQ   82 (338)
T ss_dssp             ECCCC
T ss_pred             eeccc
Confidence            98863

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.62  E-value=0.012  Score=45.20  Aligned_cols=43  Identities=16%  Similarity=0.213  Sum_probs=37.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF  202 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~  202 (347)
                      +|.|+||+|++|.+.++.+...|++|++..|++++.+.+.+++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            5788877899999999999999999999999999877665443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.58  E-value=0.019  Score=49.54  Aligned_cols=32  Identities=19%  Similarity=0.076  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA  189 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~  189 (347)
                      |.+|||+||+|-+|..++..+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67899999999999999999999999999986

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.56  E-value=0.034  Score=42.50  Aligned_cols=88  Identities=24%  Similarity=0.235  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -.|.++.|.|. |.+|+..+++++..|.+|++.++...+.. .. ..+..    +.   ++.+.+.+     .|+|+-+.
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~-~~-~~~~~----~~---~l~ell~~-----sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPAR-AA-QLGIE----LL---SLDDLLAR-----ADFISVHL  106 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHH-HH-HHTCE----EC---CHHHHHHH-----CSEEEECC
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhH-Hh-hcCce----ec---cHHHHHhh-----CCEEEEcC
Confidence            35789999995 99999999999999999999997655432 22 34432    11   44445554     79998776


Q ss_pred             Cc-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          236 GG-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .. +     .-...++.|+++..+|.++-
T Consensus       107 Plt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            53 2     22567788899988887764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.54  E-value=0.026  Score=40.72  Aligned_cols=76  Identities=17%  Similarity=0.142  Sum_probs=48.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  238 (347)
                      +|.|.|++|-+|+..++..... +.++.+.....+......                         ..++|++||.+..+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~-------------------------~~~~DvvIDFS~p~   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT-------------------------DGNTEVVIDFTHPD   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH-------------------------TTTCSEEEECCCTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc-------------------------cccCCEEEEcccHH
Confidence            5899999999999988887665 667766553221111111                         12478888887776


Q ss_pred             hHHHHHHhhccCCEEEEEcccc
Q 019042          239 MLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       239 ~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      .....++.+...|.-+.+|.++
T Consensus        56 ~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1          56 VVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             THHHHHHHHHHTTCEEEECCCC
T ss_pred             HHHHHHHHHHhcCCCEEEeccc
Confidence            6666666555666556667654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.50  E-value=0.019  Score=44.65  Aligned_cols=69  Identities=22%  Similarity=0.294  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -+|.+|+|+| .|.+|..+++++...|++|++.+.+.++..... .+|... ++..   +       +..-.+|+++=|.
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~-~~~~---~-------~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTA-VALE---D-------VLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-CCGG---G-------GGGCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhcccc-cCcc---c-------cccccceeeeccc
Confidence            3689999999 699999999999999999999999999888887 777643 2221   1       1112478887666


Q ss_pred             Cc
Q 019042          236 GG  237 (347)
Q Consensus       236 g~  237 (347)
                      .+
T Consensus        92 ~~   93 (201)
T d1c1da1          92 MG   93 (201)
T ss_dssp             CS
T ss_pred             cc
Confidence            54

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.45  E-value=0.019  Score=45.05  Aligned_cols=101  Identities=13%  Similarity=0.127  Sum_probs=63.8

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCCc
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      ..++||++||=.|+  |.|..+..+++..+ .+|++++-++...+.+++..   +-...+..+.. +. .... .....+
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~~-~~~~~v  126 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-KP-WKYS-GIVEKV  126 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-CG-GGTT-TTCCCE
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-Cc-cccc-cccceE
Confidence            58899999999996  45677888888775 39999999998777765322   21111111111 10 0000 011247


Q ss_pred             cEEEECCCc-----hhHHHHHHhhccCCEEEEEcc
Q 019042          229 DIYFENVGG-----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       229 d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |+++....-     ..+..+.+.|+++|+++++-.
T Consensus       127 d~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  161 (209)
T d1nt2a_         127 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVK  161 (209)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEecccChhhHHHHHHHHHHHhccCCeEEEEEE
Confidence            777665432     156778889999999987643

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.43  E-value=0.0021  Score=51.69  Aligned_cols=74  Identities=19%  Similarity=0.226  Sum_probs=46.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +.+|||+||+|-+|...++.+...|.  +|++++|++.+...-. .-... .+.|..+.    +.+.+.. .++|+++.|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~----~~~~~~~-~~~d~vi~~   87 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAF-QGHDVGFCC   87 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGG-SSCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccc----ccccccc-ccccccccc
Confidence            46899999999999999998887775  8999998654321111 01111 12233222    1222221 258999999


Q ss_pred             CCc
Q 019042          235 VGG  237 (347)
Q Consensus       235 ~g~  237 (347)
                      +|.
T Consensus        88 ~~~   90 (232)
T d2bkaa1          88 LGT   90 (232)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.40  E-value=0.045  Score=42.87  Aligned_cols=94  Identities=16%  Similarity=0.068  Sum_probs=62.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCC-eeEecCChhhHHHHHHHHCCCCcc
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFD-DAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      .+.++++||=+|+  |.|..+..+++ .|++|++++.+++-.+.+++.   .+.. ..+..+.. ++     ....+.+|
T Consensus        34 ~l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~l-----~~~~~~fD  104 (226)
T d1ve3a1          34 YMKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KL-----SFEDKTFD  104 (226)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SC-----CSCTTCEE
T ss_pred             hcCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc-cc-----cccCcCce
Confidence            4678899999995  55888888886 589999999999888777633   2321 12222111 11     01113689


Q ss_pred             EEEECCCc---------hhHHHHHHhhccCCEEEEE
Q 019042          230 IYFENVGG---------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       230 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~  256 (347)
                      +|+....-         ..++...++|+|||+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            98864431         1577788899999998754

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.38  E-value=0.36  Score=36.26  Aligned_cols=140  Identities=11%  Similarity=0.062  Sum_probs=79.4

Q ss_pred             EEEEEcCCChHHHH-HHHHHHHCC--CEEEEE-eCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          160 YVYVSAASGAVGQL-VGQFAKLVG--CYVVGS-AGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       160 ~vlI~ga~g~vG~~-a~qla~~~G--~~V~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +|.|+| +|.+|.- .+...+..+  ++++++ ++++++.+.+.+.++...++  +   ++.+.+..   ..+|+|+-|+
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~--~---~~~ell~~---~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--D---SYEELLES---GLVDAVDLTL   75 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--S---CHHHHHHS---SCCSEEEECC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee--e---eeeccccc---cccceeeccc
Confidence            688999 5999864 466666553  477755 45566666665578865543  2   44444442   3589999888


Q ss_pred             Cc-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHh-ccceeeeeEecccccchHHHHHHHHHHHHcCCccc
Q 019042          236 GG-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVG-KRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVY  313 (347)
Q Consensus       236 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  313 (347)
                      .. .+...+..+++.+=. |.+.-+-..+.   .....+..... ++..+. .....-...+...+.++.+++++|++-.
T Consensus        76 p~~~h~~~~~~al~~gk~-V~~EKPl~~~~---~e~~~l~~~~~~~~~~~~-v~~~~R~~~~~~~~~~~~~~i~~G~ig~  150 (181)
T d1zh8a1          76 PVELNLPFIEKALRKGVH-VICEKPISTDV---ETGKKVVELSEKSEKTVY-IAENFRENSYQKEFEDFYQVVAEGKPND  150 (181)
T ss_dssp             CGGGHHHHHHHHHHTTCE-EEEESSSSSSH---HHHHHHHHHHHHCSSCEE-EECGGGCCHHHHHHHHHHHHHHSCCCCS
T ss_pred             cccccccccccccccchh-hhcCCCCcCCH---HHHHHHHHHHHHhCCeEE-EEeeccccccCHHHHHHHHHHHCCCCcc
Confidence            76 467777777776644 55554322110   01111222222 233222 1111102235677889999999988754

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.37  E-value=0.026  Score=44.95  Aligned_cols=103  Identities=11%  Similarity=0.060  Sum_probs=65.2

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCC---CeeEecCChhhHHHHHHHHCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGF---DDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ....+++|++||=.|+  |.|..+..+++.. +..|++++-++.-.+.+++....   ...+..+.. +. ....... .
T Consensus        68 ~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~~~~~-~  142 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KP-QEYANIV-E  142 (230)
T ss_dssp             CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CG-GGGTTTC-C
T ss_pred             HhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-cC-ccccccc-c
Confidence            3457899999999996  5678888888875 35999999999888777732211   112222211 11 1111111 1


Q ss_pred             CccEEEECCCc-----hhHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFENVGG-----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .+|+++.....     ..+..+.+.|+++|.+++.-.
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~k  179 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIK  179 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccCceEEEEee
Confidence            46666665542     147778889999999887643

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.045  Score=46.08  Aligned_cols=73  Identities=16%  Similarity=0.154  Sum_probs=47.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHh---CCCe-eEecCChhhHHHHHHHHCCCCccEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAG----SKEKVNLLKNKF---GFDD-AFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~----~~~~~~~~~~~~---g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +|||+||+|-+|...+..+...|.+|+++++    ........+ .+   .... ..|..+.+.+.+.++.   .++|+|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~V   77 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH-hhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            5999999999999999999999999999864    222223332 22   2221 1333343234444443   258999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+++
T Consensus        78 iHlAa   82 (338)
T d1udca_          78 IHFAG   82 (338)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99875

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.28  E-value=0.024  Score=46.13  Aligned_cols=32  Identities=16%  Similarity=0.215  Sum_probs=29.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      +|||+||+|-+|...+..++..|.+|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            59999999999999999999999999999865

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.21  E-value=0.099  Score=41.62  Aligned_cols=95  Identities=15%  Similarity=0.118  Sum_probs=63.4

Q ss_pred             hhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-eeEecCChhhHHHHHHHHC-
Q 019042          150 YELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-DAFNYKKEPDLDAALKRCF-  224 (347)
Q Consensus       150 ~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~-  224 (347)
                      .......++++||=.|+  |.|..+..+++ .|++|++++.+++-.+.+++.+   +.. ..+..+        +..+. 
T Consensus        34 ~~~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d--------~~~l~~  102 (251)
T d1wzna1          34 FKEDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD--------VLEIAF  102 (251)
T ss_dssp             HHHTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC--------GGGCCC
T ss_pred             HHHhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchheehh--------hhhccc
Confidence            34446667789999995  35787777776 6899999999998777777432   221 222221        11222 


Q ss_pred             CCCccEEEECCCc----------hhHHHHHHhhccCCEEEE
Q 019042          225 PEGIDIYFENVGG----------KMLDAVLLNMRIHGRIAV  255 (347)
Q Consensus       225 ~~~~d~vid~~g~----------~~~~~~~~~l~~~G~~v~  255 (347)
                      ++.+|+|+...+.          ..++.+.++|+++|.++.
T Consensus       103 ~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         103 KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            2379999875432          256778889999999875

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.18  E-value=0.051  Score=41.57  Aligned_cols=40  Identities=13%  Similarity=0.031  Sum_probs=34.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      ++|.|+|+ |.+|...+.++...|.+|+..+.+++.++.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            46999996 99999888888889999999999988766554

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.016  Score=49.51  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=29.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      +.|||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5789999999999999999999999999999754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=95.11  E-value=0.011  Score=47.97  Aligned_cols=35  Identities=14%  Similarity=0.254  Sum_probs=31.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      +.|+|+||++++|.+.++.+...|++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            46899999999999999999999999999997643

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.09  E-value=0.16  Score=37.58  Aligned_cols=86  Identities=12%  Similarity=0.069  Sum_probs=60.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc-h
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-K  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~  238 (347)
                      +|.|+| .|.+|...+.-+...|.+|++..+++++.+.++ +.++.. .  .   +..+.+++     .|++|-|+.. +
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~-~--~---~~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET-A--S---TAKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C--S---SHHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhh-c--c---cHHHHHhC-----CCeEEEEcCCHH
Confidence            478899 599999999888889999999999999998888 777632 1  1   23333333     7888888865 3


Q ss_pred             hHHH-------HHHhhccCCEEEEEcc
Q 019042          239 MLDA-------VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       239 ~~~~-------~~~~l~~~G~~v~~g~  258 (347)
                      ....       ....++++-.++.+++
T Consensus        69 ~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhCCcchhhccCCCCEEEECCC
Confidence            3332       3445566667776655

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.05  E-value=0.013  Score=48.51  Aligned_cols=96  Identities=13%  Similarity=0.001  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-----eeEecCChhhHHHHHHHHCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-----DAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-----~vi~~~~~~~~~~~i~~~~~  225 (347)
                      +.+++.+||=.|+  |.|..++.+++. |++|++++.+++-++.+++..   +..     ..+..-   ++...-.....
T Consensus        53 ~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  126 (292)
T d1xvaa_          53 RQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA---NWLTLDKDVPA  126 (292)
T ss_dssp             HHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---CGGGHHHHSCC
T ss_pred             hhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec---cccccccccCC
Confidence            4456779999884  678888888875 899999999998777776322   111     011111   11111122222


Q ss_pred             C-CccEEEECCCc---------------hhHHHHHHhhccCCEEEE
Q 019042          226 E-GIDIYFENVGG---------------KMLDAVLLNMRIHGRIAV  255 (347)
Q Consensus       226 ~-~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~  255 (347)
                      + .+|.|+.....               ..+..+.+.|+|||.++.
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            3 79999864321               157888999999999886

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.04  E-value=0.057  Score=42.65  Aligned_cols=49  Identities=22%  Similarity=0.164  Sum_probs=43.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD  205 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~  205 (347)
                      -+|.+|+|+| .|.+|..+++++...|++|++++.+..+.+.+.+..|+.
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence            4689999999 599999999999999999999999988887777567764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.03  E-value=0.039  Score=42.50  Aligned_cols=89  Identities=21%  Similarity=0.172  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      -.|.+|.|+| .|.+|...+++++..|++|++.++.... +... ..+...   . .  ++.+.+..     .|+|.-+.
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~-~~~~~~---~-~--~l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSD-GVER-ALGLQR---V-S--TLQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCT-THHH-HHTCEE---C-S--SHHHHHHH-----CSEEEECC
T ss_pred             eeCceEEEec-cccccccceeeeeccccceeeccCcccc-cchh-hhcccc---c-c--chhhcccc-----CCEEEEee
Confidence            3588999999 5999999999999999999999876443 2222 344322   1 1  45555554     78887766


Q ss_pred             Cc--h----hHHHHHHhhccCCEEEEEcc
Q 019042          236 GG--K----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~--~----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ..  +    .-...++.|+++..+|.++-
T Consensus       113 plt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCCCeEEecCC
Confidence            52  2    22456778899988887764

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.03  E-value=0.04  Score=46.28  Aligned_cols=102  Identities=18%  Similarity=0.146  Sum_probs=64.6

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHH--CCCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRC--FPEG  227 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~--~~~~  227 (347)
                      .+++|++||=.+  ++.|..++.+|+. |+ +|++++.++...+.+++.   .|....+..... |..+.+..+  .++.
T Consensus       142 ~~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred             hcCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCC
Confidence            467899998776  4566666766654 66 899999999988877643   344211222122 333333332  2237


Q ss_pred             ccEEEECCCc----------------hhHHHHHHhhccCCEEEEEccc
Q 019042          228 IDIYFENVGG----------------KMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       228 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      ||+|+-....                +.+..++++|++||.++.+...
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            9999853321                1456678899999999987653

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=94.92  E-value=0.056  Score=43.58  Aligned_cols=99  Identities=8%  Similarity=0.008  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC--CCCccE
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF--PEGIDI  230 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~~~~d~  230 (347)
                      ....++.+||=.|  .|.|..+.+++...+.+|++++.+++-.+.+++.+.....+++... ++    .++.  .+.+|+
T Consensus        89 l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d~----~~~~~~~~~fD~  161 (254)
T d1xtpa_          89 LPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-SM----ETATLPPNTYDL  161 (254)
T ss_dssp             STTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-CG----GGCCCCSSCEEE
T ss_pred             CCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-cc----cccccCCCccce
Confidence            3456677899888  4789999999987777999999999988889855544333333221 21    1222  236999


Q ss_pred             EEECCCc---------hhHHHHHHhhccCCEEEEEcc
Q 019042          231 YFENVGG---------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       231 vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |+....-         ..+..+.+.|+++|.+++...
T Consensus       162 I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            9864431         246778889999999987543

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.70  E-value=0.58  Score=35.07  Aligned_cols=91  Identities=11%  Similarity=0.104  Sum_probs=60.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEE-eCCHHHHHHHHHHhCCCe-eEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGS-AGSKEKVNLLKNKFGFDD-AFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~-~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++.|+| +|.+|...++.++.. +++++++ +.++++.+.+.++++... .-.++   ++.+.+..   ..+|+|+-|+.
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~---~~iD~v~I~tp   75 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLED---PEIDALYVPLP   75 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHHC---TTCCEEEECCC
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhhc---cccceeeeccc
Confidence            588999 599998888888776 6788866 456666555554776532 11122   44444442   25999999987


Q ss_pred             c-hhHHHHHHhhccCCEEEEEcc
Q 019042          237 G-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      . .++..+..+++.+=. |.+.-
T Consensus        76 ~~~h~~~~~~~l~~g~~-v~~EK   97 (184)
T d1ydwa1          76 TSLHVEWAIKAAEKGKH-ILLEK   97 (184)
T ss_dssp             GGGHHHHHHHHHTTTCE-EEECS
T ss_pred             chhhcchhhhhhhccce-eeccc
Confidence            7 577888888886644 55654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.65  E-value=0.034  Score=46.67  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      +++||+||+|-+|...+..+...|.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            479999999999999999999999999999974

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.64  E-value=0.21  Score=37.33  Aligned_cols=96  Identities=15%  Similarity=0.074  Sum_probs=61.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CEEEEEeC--CHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC----------CC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVG-CYVVGSAG--SKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF----------PE  226 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~--~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~----------~~  226 (347)
                      +|.|+| .|-+|...+..+.... .+++++..  .......+. .++.+... ...  +.........          ..
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYA-ASE--EFIPRFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEE-SSG--GGHHHHHHHTCCCSCBHHHHHT
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeec-ccc--cceeeecccCccccchhhhhhc
Confidence            689999 5999998888776654 57776653  233445555 56653221 111  1111111110          02


Q ss_pred             CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          227 GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       227 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ++|+|+||+|. .....+..+++.|-+.|..+.+.
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            59999999998 56777888999999999887754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.58  E-value=0.023  Score=39.49  Aligned_cols=38  Identities=16%  Similarity=0.224  Sum_probs=32.7

Q ss_pred             CCCC-CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          155 PKKG-EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       155 ~~~~-~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      +.++ .+|.|+|+ |.+|++.++-|+.+|.++++.+.+++
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3444 46999995 99999999999999999999997765

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.57  E-value=0.07  Score=40.92  Aligned_cols=89  Identities=10%  Similarity=0.044  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.++.|+|. |.+|+..+++++..|.+|+..++......... ..+..   .+.   ++.+.+.+     .|+|.-+..
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~---~~~---~l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQAT---FHD---SLDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCE---ECS---SHHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh-ccccc---ccC---CHHHHHhh-----CCeEEecCC
Confidence            4799999995 99999999999999999999887544222222 22221   111   45555554     799887664


Q ss_pred             c--h----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G--K----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~--~----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      -  +    .-...++.|+++..+|.++-
T Consensus       113 lt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCccEEEecCC
Confidence            3  1    22567788999998888764

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.51  E-value=0.016  Score=44.87  Aligned_cols=101  Identities=15%  Similarity=0.119  Sum_probs=64.2

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCe-eEecCChhhHHHHHHHHC
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDD-AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-vi~~~~~~~~~~~i~~~~  224 (347)
                      |.......++++||=.|+  |.|..++.+++ .+.+|++++.++...+.+++.+   +... .+..... |+.+   ...
T Consensus        44 Li~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~-d~~~---~~~  116 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS-DLYE---NVK  116 (194)
T ss_dssp             HHHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC-STTT---TCT
T ss_pred             HHHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEc-chhh---hhc
Confidence            445567888999999984  66777777765 5679999999998777776422   3211 1111111 2111   112


Q ss_pred             CCCccEEEECC----Cch----hHHHHHHhhccCCEEEEE
Q 019042          225 PEGIDIYFENV----GGK----MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       225 ~~~~d~vid~~----g~~----~~~~~~~~l~~~G~~v~~  256 (347)
                      ++.+|+|+...    +..    .++.+.+.|+++|+++..
T Consensus       117 ~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            23799999642    222    467788899999998654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.43  E-value=0.065  Score=40.52  Aligned_cols=53  Identities=17%  Similarity=0.133  Sum_probs=39.1

Q ss_pred             HhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Q 019042          148 GLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF  202 (347)
Q Consensus       148 ~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~  202 (347)
                      +|.+...--+|++|+|.|+ ||++.+++..+...| +|++..|+.++.+.+.+.+
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1           8 ALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             HHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             HHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            3433333357899999995 999998887776556 9999999998877665344

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.39  E-value=0.13  Score=34.35  Aligned_cols=71  Identities=14%  Similarity=0.154  Sum_probs=48.6

Q ss_pred             CCCCCCEEEEEcCCChHHHHH-HHHHHHCCCEEEEEeCCH-HHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLV-GQFAKLVGCYVVGSAGSK-EKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a-~qla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      .+...+++.+.|. |++|+.+ +++++..|++|.+.+... ...+.++ +.|.. +...... +   .+     .+.|+|
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~-v~~g~~~-~---~i-----~~~d~v   71 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAK-IYIGHAE-E---HI-----EGASVV   71 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCE-EEESCCG-G---GG-----TTCSEE
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCe-EEECCcc-c---cC-----CCCCEE
Confidence            4556789999996 8899777 899999999999999763 3445666 67874 3332222 1   11     137877


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +-+.+
T Consensus        72 V~S~A   76 (96)
T d1p3da1          72 VVSSA   76 (96)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            76655

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.01  Score=49.69  Aligned_cols=32  Identities=16%  Similarity=0.202  Sum_probs=29.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG  190 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~  190 (347)
                      ++|||+||+|-+|...+..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            57999999999999999999889999999875

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.25  E-value=0.14  Score=41.55  Aligned_cols=95  Identities=12%  Similarity=0.040  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      ..++.+||=+|.  |.|..+..+++.. +.++++++.+++-.+.+++...-...+..+.. ++     .+..+.+|+|+.
T Consensus        82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence            456788998884  5677788888876 67999999999988888733322221111111 11     011236999997


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEc
Q 019042          234 NVGGKMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       234 ~~g~~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ......+.+..+.|+|+|.++...
T Consensus       154 ~~~~~~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         154 IYAPCKAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHhCCCcEEEEEe
Confidence            666568889999999999998764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.17  E-value=0.082  Score=39.29  Aligned_cols=97  Identities=15%  Similarity=0.052  Sum_probs=65.9

Q ss_pred             cccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          136 GILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       136 a~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      .-+|++....+..|.+..---.|++|+|.|-+.-+|.-+..++...|++|+.+.+...                     +
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~   73 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------N   73 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------C
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------h
Confidence            3445454444545544333347999999999889999999999999999987754321                     2


Q ss_pred             HHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.+.+++     .|+++-++|.+.+-. -+.++++-.++.+|..
T Consensus        74 l~~~~~~-----ADivI~a~G~p~~i~-~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          74 LRHHVEN-----ADLLIVAVGKPGFIP-GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             HHHHHHH-----CSEEEECSCCTTCBC-TTTSCTTCEEEECCCE
T ss_pred             hHHHHhh-----hhHhhhhccCccccc-ccccCCCcEEEecCce
Confidence            2233333     799999998752211 2467888899988874

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.16  E-value=0.074  Score=40.71  Aligned_cols=80  Identities=16%  Similarity=0.156  Sum_probs=57.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC------ee----EecCChhhHHHHHHHHCCCCcc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD------DA----FNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~------~v----i~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      +|.|+|+ |..|.+.+.++...|.+|+...++++..+.+. +-+..      ..    +....  ++.+.+.     +.|
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~-~~~~n~~yl~~~~l~~~i~~t~--~l~~a~~-----~ad   79 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN-EKRENVLFLKGVQLASNITFTS--DVEKAYN-----GAE   79 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH-HHTBCTTTSTTCBCCTTEEEES--CHHHHHT-----TCS
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh-hcccccccccccccccccccch--hhhhccC-----CCC
Confidence            6999996 99999999999888889999999999888776 33210      01    11111  4444443     389


Q ss_pred             EEEECCCchhHHHHHHhhc
Q 019042          230 IYFENVGGKMLDAVLLNMR  248 (347)
Q Consensus       230 ~vid~~g~~~~~~~~~~l~  248 (347)
                      ++|-++....++..++.++
T Consensus        80 ~iiiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          80 IILFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             CEEECSCHHHHHHHHHHHC
T ss_pred             EEEEcCcHHHHHHHHHHHH
Confidence            9999999877777766544

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.12  E-value=0.056  Score=45.87  Aligned_cols=73  Identities=21%  Similarity=0.304  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      ++-+|||+||+|-+|...+..+...|.+|+++++...... .. ......  ..|..   +.......+  .++|.|+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~-~~~~~~~~~~D~~---~~~~~~~~~--~~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TE-DMFCDEFHLVDLR---VMENCLKVT--EGVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CG-GGTCSEEEECCTT---SHHHHHHHH--TTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hh-hcccCcEEEeech---hHHHHHHHh--hcCCeEeec
Confidence            5778999999999999999999999999999976433211 11 122222  22322   332222222  258999987


Q ss_pred             CC
Q 019042          235 VG  236 (347)
Q Consensus       235 ~g  236 (347)
                      ++
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.09  E-value=0.15  Score=42.71  Aligned_cols=75  Identities=19%  Similarity=0.152  Sum_probs=46.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHH--HhCCC-eeEecCChhhHHHHHHHHCCCCccEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS----KEKVNLLKN--KFGFD-DAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~----~~~~~~~~~--~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +.|||+||+|-+|...+..+...|.+|+++++.    .+.......  .-+.. ...|..+.+++.+.+...   ++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~---~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---KIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---CCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc---CCCEE
Confidence            579999999999999999998899999998631    122122220  11222 123434432333333321   59999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+++
T Consensus        79 ihlAa   83 (347)
T d1z45a2          79 IHFAG   83 (347)
T ss_dssp             EECCS
T ss_pred             EEccc
Confidence            99886

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.07  E-value=0.12  Score=42.35  Aligned_cols=34  Identities=12%  Similarity=0.107  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      ++|||+||+|-+|...+..+...|.+|++++|+.
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            4699999999999999999988999999998753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.00  E-value=0.057  Score=41.06  Aligned_cols=83  Identities=22%  Similarity=0.193  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+|. |.+|...+++++..|++|++.+++...        +....  +.   ++.+.+.     ..|+|+-+..
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~--~~---~l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRF--TN---SLEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCC--BS---CSHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc--------cceee--ee---chhhhhh-----ccchhhcccc
Confidence            5889999995 999999999999999999999876431        11111  11   3333443     2799988764


Q ss_pred             c--h----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G--K----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~--~----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      -  +    .-...++.|+++..+|.++-
T Consensus       102 l~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cccccccccccceeeeccccceEEeccc
Confidence            3  2    22667789999999998864

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.97  E-value=0.045  Score=42.63  Aligned_cols=68  Identities=18%  Similarity=0.145  Sum_probs=44.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ++|||+||+|-+|...+..+...|.  +|++..+++..         ...-+..... ++.+.... ..+.+|.|+.|.|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------~~~~~~~~~~-d~~~~~~~-~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVG-PLAELLPQ-LDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBS-CHHHHGGG-CCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------hccccccccc-chhhhhhc-cccchheeeeeee
Confidence            6899999999999999999888886  67777654321         1111222222 44333322 2336899999987


Q ss_pred             c
Q 019042          237 G  237 (347)
Q Consensus       237 ~  237 (347)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.90  E-value=0.12  Score=40.57  Aligned_cols=97  Identities=10%  Similarity=0.088  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHCCCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKL---VGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCFPEG  227 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~---~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~  227 (347)
                      .++++.+||=.|.  |.|..+..+++.   .+++|++++.+++-.+.+++.+   +....+..... +.    .....+.
T Consensus        36 ~~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d~----~~~~~~~  108 (225)
T d1im8a_          36 FVTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-DI----RHVEIKN  108 (225)
T ss_dssp             HCCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-CT----TTCCCCS
T ss_pred             hcCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-hh----hcccccc
Confidence            4678999999984  678778888875   4789999999999888887433   22211211111 11    1111225


Q ss_pred             ccEEEECCCc---------hhHHHHHHhhccCCEEEEEc
Q 019042          228 IDIYFENVGG---------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       228 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +|+++-+..-         ..++...+.|+|+|.++...
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            6777654331         26888999999999999764

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.85  E-value=0.071  Score=43.10  Aligned_cols=96  Identities=18%  Similarity=0.097  Sum_probs=64.6

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC---eeEecCChhhHHHHHHHHCCC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD---DAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ..+++|++||-.++  |+|..++.+|+.-+++|++++.+++..+.+++..   |..   .+++.+.. +       +...
T Consensus       103 ~~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~-~-------~~~~  172 (260)
T d2frna1         103 KVAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR-D-------FPGE  172 (260)
T ss_dssp             HHCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT-T-------CCCC
T ss_pred             hhcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH-H-------hccC
Confidence            35688999999884  6788888888875569999999999887776432   332   23333221 1       2223


Q ss_pred             -CccEEEEC-CC--chhHHHHHHhhccCCEEEEEcc
Q 019042          227 -GIDIYFEN-VG--GKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 -~~d~vid~-~g--~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                       .+|.|+-. ..  ...+..+++.+++||.+.....
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence             68866543 22  2478889999999998765443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.84  E-value=0.015  Score=43.58  Aligned_cols=87  Identities=15%  Similarity=0.101  Sum_probs=55.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-----eeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-----DAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +|+|+|+ |.+|.+....+...|.+|..+++++++.+..+ ..+..     ..+....    .+.+.     .+|++|-+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~-----~~D~iii~   70 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTAND----PDFLA-----TSDLLLVT   70 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEESC----HHHHH-----TCSEEEEC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCccccccccccch----hhhhc-----ccceEEEe
Confidence            6899996 99999988888889999999998876433222 22221     1121211    22222     48999999


Q ss_pred             CCchhHHHHHH----hhccCCEEEEEc
Q 019042          235 VGGKMLDAVLL----NMRIHGRIAVCG  257 (347)
Q Consensus       235 ~g~~~~~~~~~----~l~~~G~~v~~g  257 (347)
                      +.......+++    ++.++..++.+.
T Consensus        71 vka~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          71 LKAWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             SCGGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             ecccchHHHHHhhccccCcccEEeecc
Confidence            98754444444    445556666653

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.83  E-value=0.2  Score=38.28  Aligned_cols=93  Identities=13%  Similarity=0.058  Sum_probs=60.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCee-EecCChhhHHHHHHHHC-CCCcc
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDA-FNYKKEPDLDAALKRCF-PEGID  229 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~v-i~~~~~~~~~~~i~~~~-~~~~d  229 (347)
                      +.+| +||=+|+  |.|..+..+++ .|.+|++++.+++-++.+++   ..+...+ +...+   +    .+.. .+.||
T Consensus        29 ~~~g-rvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d---~----~~~~~~~~fD   97 (198)
T d2i6ga1          29 VAPG-RTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD---L----NTLTFDGEYD   97 (198)
T ss_dssp             SCSC-EEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC---T----TTCCCCCCEE
T ss_pred             CCCC-cEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhhee---c----cccccccccc
Confidence            3444 8999984  58888888876 58999999999987776652   2344321 11111   1    1111 23699


Q ss_pred             EEEECCCc---------hhHHHHHHhhccCCEEEEEcc
Q 019042          230 IYFENVGG---------KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       230 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +|+...--         ..++.+.++|+++|.++....
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          98 FILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             EEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             EEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99863321         266778889999999887654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.83  E-value=0.021  Score=36.78  Aligned_cols=34  Identities=24%  Similarity=0.263  Sum_probs=30.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      ++|.|.|+ |.+|++.++-++.+|.++.+.+.+++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            47999995 99999999999999999999997654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.82  E-value=0.39  Score=35.20  Aligned_cols=92  Identities=15%  Similarity=0.179  Sum_probs=54.2

Q ss_pred             CEEEEEcCCChHHH-HHHHHHHHC-CCEEEEEeCC-H--HHHHHHHHHhCCCeeEecCChhhHHHHHHHHCC-CCccEEE
Q 019042          159 EYVYVSAASGAVGQ-LVGQFAKLV-GCYVVGSAGS-K--EKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP-EGIDIYF  232 (347)
Q Consensus       159 ~~vlI~ga~g~vG~-~a~qla~~~-G~~V~~~~~~-~--~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~-~~~d~vi  232 (347)
                      =++.|+| +|.+|. ..+++++.. ..+++++++. .  ....+++ ++|....  +.   .+ +.+.+... .++|+||
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~--~~---~~-d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTT--YA---GV-EGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEE--SS---HH-HHHHHSGGGGGEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCccc--cc---ce-eeeeecccccccCEEE
Confidence            3689999 699986 567787766 4578777643 2  2345666 7776431  22   22 22222211 2699999


Q ss_pred             ECCCc-hhHHH--HHHhhccCCEEEEEcc
Q 019042          233 ENVGG-KMLDA--VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       233 d~~g~-~~~~~--~~~~l~~~G~~v~~g~  258 (347)
                      +++.. .+...  +.+.++.|-.++....
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             EcCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence            98864 34443  3444555556655543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=93.71  E-value=0.13  Score=43.34  Aligned_cols=37  Identities=24%  Similarity=0.223  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      +-++|+|+||+|.+|...+..+...|.+|++++|+.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            3468999999999999999999999999999998654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.70  E-value=0.078  Score=37.72  Aligned_cols=73  Identities=15%  Similarity=0.085  Sum_probs=51.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchh
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKM  239 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  239 (347)
                      +|.|+|++|-+|++..+++...+.+++.......           ..        ++         ..+|++||.+..+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-----------~~--------~~---------~~~DVvIDFS~p~~   53 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-----------VE--------EL---------DSPDVVIDFSSPEA   53 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-----------EE--------EC---------SCCSEEEECSCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-----------HH--------Hh---------ccCCEEEEecCHHH
Confidence            5899999999999999999998887765432110           00        00         13789999988876


Q ss_pred             HHHHHHhhccCCEEEEEcccc
Q 019042          240 LDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       240 ~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +...++.....+.-+.+|++.
T Consensus        54 ~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          54 LPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             HHHHHHHHHHHTCEEEECCCS
T ss_pred             HHHHHHHHHhcCCCEEEEcCC
Confidence            666666666666666677764

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.69  E-value=0.037  Score=43.47  Aligned_cols=100  Identities=13%  Similarity=0.135  Sum_probs=62.1

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHH---HHHH
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAA---LKRC  223 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~---i~~~  223 (347)
                      ..+..+.++||=+|  ++.|..++.+|+++  +.+|+.++.+++..+.+++   ..|....+..... +..+.   +...
T Consensus        51 lv~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~G-d~~e~l~~l~~~  127 (214)
T d2cl5a1          51 VIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKK  127 (214)
T ss_dssp             HHHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGHHHH
T ss_pred             HHHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeec-cccccccchhhc
Confidence            33445567999998  57788889999876  5799999999887776653   4465332222222 33333   3332


Q ss_pred             CC-CCccEEEE-CCCch-----hHHHHHHhhccCCEEE
Q 019042          224 FP-EGIDIYFE-NVGGK-----MLDAVLLNMRIHGRIA  254 (347)
Q Consensus       224 ~~-~~~d~vid-~~g~~-----~~~~~~~~l~~~G~~v  254 (347)
                      .. +.+|++|- +....     .+..++++|++||.++
T Consensus       128 ~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         128 YDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             SCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             ccccccceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            22 26898764 33222     2445566799999755

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.67  E-value=0.53  Score=35.27  Aligned_cols=93  Identities=13%  Similarity=0.078  Sum_probs=55.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCC--HHHHHHHHHHhCCCeeEecCChhhHHHHHHHHC----C------C
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGS--KEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCF----P------E  226 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~--~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~----~------~  226 (347)
                      +|.|.| .|-+|+..+..+... ..+++++...  ......+. ..+.......+   . ...+.+..    +      .
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~~~---~-~~~~~~~~i~v~g~~~~~~~   76 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVPQQ---S-IKKFEESGIPVAGTVEDLIK   76 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECCGG---G-HHHHHTTTCCCCCCHHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceeccCc---c-ceeccccceecCCchhhhhh
Confidence            589999 699999999999876 4588877542  22333333 33432111111   1 11111100    0      1


Q ss_pred             CccEEEECCCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ++|+|+||+|. ...+.+-.+++.+-+++..+.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            38999999997 466667778877767776554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.59  E-value=0.38  Score=35.37  Aligned_cols=44  Identities=14%  Similarity=0.017  Sum_probs=37.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD  205 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~  205 (347)
                      +|.++| .|-+|...+.-+...|.+|++..+++++.+.+. ..+..
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~~   46 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGAS   46 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhcc
Confidence            688999 599999888888888999999999999988887 66653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.55  E-value=0.091  Score=40.15  Aligned_cols=89  Identities=13%  Similarity=-0.016  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .+.++.|.|. |.+|...++.++..|.+|+..++........+ ..+...   ..   ++.+.++     ..|+|+-+..
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~~l~-----~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTW---HA---TREDMYP-----VCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHGG-----GCSEEEECSC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccc-cccccc---cC---CHHHHHH-----hccchhhccc
Confidence            5789999994 99999999999999999999997544333333 444321   11   3333333     2788877664


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      - +     .-...+..|+++..+|.++-
T Consensus       110 lt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhHHHHHHhCCCCCEEEecCc
Confidence            2 2     23567778888888887754

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.53  E-value=0.51  Score=35.11  Aligned_cols=97  Identities=13%  Similarity=0.109  Sum_probs=58.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCC--HHHHHHHHHHhCCCeeEecCCh-hhHHH-------HHHHHCCCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGS--KEKVNLLKNKFGFDDAFNYKKE-PDLDA-------ALKRCFPEGI  228 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~--~~~~~~~~~~~g~~~vi~~~~~-~~~~~-------~i~~~~~~~~  228 (347)
                      +|.|.| -|-+|....+.+...+ .+++++...  ......+. .++.+......+. ..+.+       .+.++. .++
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~v   79 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA   79 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccccceeecccCcccCCChhHhh-cCC
Confidence            689998 6999999999887665 477666532  23334444 5554432211111 00100       011111 159


Q ss_pred             cEEEECCCc-hhHHHHHHhhccCCEEEEEccc
Q 019042          229 DIYFENVGG-KMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       229 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      |+|+||+|. .....+..+++.+-++|..+.+
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            999999997 4666777788888888877654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.46  E-value=0.26  Score=36.92  Aligned_cols=44  Identities=14%  Similarity=-0.040  Sum_probs=37.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF  204 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~  204 (347)
                      .+|-++| .|.+|...+.-+...|.+|++..+++++.+.+. +.++
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~   46 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEA   46 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTT
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-Hhcc
Confidence            3688999 599999988888889999999999999988876 4444

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.46  E-value=0.073  Score=41.14  Aligned_cols=85  Identities=22%  Similarity=0.244  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .|.+|.|+| .|.+|+..+++++..|++|++.++...+        +....+.+.   ++.+.+.+     .|++.-+..
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMK--------GDHPDFDYV---SLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCS--------SCCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccch--------hhhcchhHH---HHHHHHHh-----cccceeeec
Confidence            478999999 5999999999999999999999875432        111112222   34444443     788877664


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      . +     .-...++.|+++..+|.++-
T Consensus       107 lt~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHhhccCCceEEEeccc
Confidence            3 2     23567788999998888764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.39  E-value=0.13  Score=42.82  Aligned_cols=99  Identities=16%  Similarity=0.090  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCCe--eEecCChhhHHHHHHHHCCCCccE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK---FGFDD--AFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      .+|++||=.++  +.|..++++|+ .+.+|++++.++...+.+++.   .|.+.  .+..+.. ++.+.+... ++.||+
T Consensus       144 ~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~-~~~~~~~~~-~~~fD~  218 (318)
T d1wxxa2         144 FRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF-DLLRRLEKE-GERFDL  218 (318)
T ss_dssp             CCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH-HHHHHHHHT-TCCEEE
T ss_pred             hCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH-HHhhhhHhh-hcCCCE
Confidence            46889987764  44555666664 456999999999988877643   34432  2222222 333333321 237999


Q ss_pred             EEECCC-----c-----------hhHHHHHHhhccCCEEEEEccc
Q 019042          231 YFENVG-----G-----------KMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       231 vid~~g-----~-----------~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      |+-...     .           +.+..++++|+|||.++.+...
T Consensus       219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            875221     1           1356778899999999987653

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=93.27  E-value=0.82  Score=33.86  Aligned_cols=98  Identities=15%  Similarity=0.065  Sum_probs=56.6

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCC-eeEecCChhhHHHHHHHHCCCCc
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFD-DAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      ..+.+|.+||=.++  |.|..++..+ ..|++|++++.+++..+.+++   .++.. .+... +.+.+.... ....+.|
T Consensus        37 ~~~~~g~~vLDl~~--G~G~~~i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~-~~d~~~~~~-~~~~~~f  111 (171)
T d1ws6a1          37 LRYPRRGRFLDPFA--GSGAVGLEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL-PVEVFLPEA-KAQGERF  111 (171)
T ss_dssp             HHCTTCCEEEEETC--SSCHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS-CHHHHHHHH-HHTTCCE
T ss_pred             ccccCCCeEEEecc--ccchhhhhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeee-ehhcccccc-cccCCcc
Confidence            35678888887763  4444555533 469999999999987776653   45553 33333 321222222 2333479


Q ss_pred             cEEEECC----Cc-hhHHHHH--HhhccCCEEEE
Q 019042          229 DIYFENV----GG-KMLDAVL--LNMRIHGRIAV  255 (347)
Q Consensus       229 d~vid~~----g~-~~~~~~~--~~l~~~G~~v~  255 (347)
                      |+||-.-    +- ..+....  .+++++|.++.
T Consensus       112 D~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         112 TVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             EEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             ceeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            9997532    22 2333333  35788887664

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.24  E-value=0.11  Score=36.38  Aligned_cols=40  Identities=18%  Similarity=0.086  Sum_probs=35.0

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .....++++|+|.|+ |.+|+-.++.++.+|.+|+.+.+++
T Consensus        16 ~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          16 ELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            346678899999996 9999999999999999999999775

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.20  E-value=0.22  Score=40.78  Aligned_cols=94  Identities=18%  Similarity=0.134  Sum_probs=63.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC---------CC-eeEecCChhhHHHHHHHHCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFG---------FD-DAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g---------~~-~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ..++|||.|  ||-|..+-.+++..+. +|.++.-+++-.+.++ ++-         .. .++. .   |-.+.+++...
T Consensus        80 ~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~-~~f~~~~~~~~~~r~~i~~-~---Da~~~l~~~~~  152 (290)
T d1xj5a_          80 NPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSK-QFFPDVAIGYEDPRVNLVI-G---DGVAFLKNAAE  152 (290)
T ss_dssp             CCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHH-HHCHHHHGGGGSTTEEEEE-S---CHHHHHHTSCT
T ss_pred             CCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHHHHHH-HhchhhhccccCCCcEEEE-c---cHHHHHhhccc
Confidence            457999999  4567777788887775 8999999998878887 432         11 1222 1   44455655444


Q ss_pred             CCccEEE-ECCCc----------hhHHHHHHhhccCCEEEEEc
Q 019042          226 EGIDIYF-ENVGG----------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       226 ~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +.+|+|| |+...          +.++.+.++|+++|.++.-.
T Consensus       153 ~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         153 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            4799875 44321          14678888999999998653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.15  E-value=0.89  Score=32.79  Aligned_cols=95  Identities=9%  Similarity=-0.050  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHH--hCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKV-NLLKNK--FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~-~~~~~~--~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      -++++|.|+ |.+|..+++.+...|.+|+++..++++. +.+++.  .|. .++..+.  .-.+.+++..-..+|.++-+
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~-~vi~Gd~--~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDS--NDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCT--TSHHHHHHHTTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCc-EEEEccC--cchHHHHHhccccCCEEEEc
Confidence            357999996 9999999999999999999998876542 233312  233 2343322  12234444433468999988


Q ss_pred             CCch--hH--HHHHHhhccCCEEEEE
Q 019042          235 VGGK--ML--DAVLLNMRIHGRIAVC  256 (347)
Q Consensus       235 ~g~~--~~--~~~~~~l~~~G~~v~~  256 (347)
                      ++.+  .+  -...+.+.+.-+++..
T Consensus        79 ~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cccHHHHHHHHHHHHHhCCCCceEEE
Confidence            8764  22  2233344555555544

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.08  E-value=0.059  Score=44.76  Aligned_cols=74  Identities=12%  Similarity=0.181  Sum_probs=46.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHhCCC-----eeEecCChhhHHHHHHHHCCCCccEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE--KVNLLKNKFGFD-----DAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~--~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      ++|||+||+|-+|..++..+...|.+|+++++...  ..+.++ .++..     ...|..+...+.+.+...   ..+++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~~~   76 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---QPQEV   76 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHH-HhcccCCcEEEEccccChHHhhhhhccc---ccccc
Confidence            47999999999999999988888999999987532  223344 44432     123333331333333332   35677


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      +.+..
T Consensus        77 ~~~a~   81 (321)
T d1rpna_          77 YNLAA   81 (321)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            76664

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.95  E-value=0.13  Score=36.16  Aligned_cols=41  Identities=15%  Similarity=-0.014  Sum_probs=34.3

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      ....-.++++|+|.|+ |.+|+-+++.++..|.+|+++.+.+
T Consensus        23 ~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             HHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            3344456789999996 9999999999999999999998764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.92  E-value=0.31  Score=31.90  Aligned_cols=65  Identities=17%  Similarity=0.179  Sum_probs=44.3

Q ss_pred             EEEEEcCCChHHHHH-HHHHHHCCCEEEEEeCCH-HHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLV-GQFAKLVGCYVVGSAGSK-EKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a-~qla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|-++|. ||+|+.+ +++++..|++|.+.+..+ +..+.++ +.|+......+.. ++         .++|+|+-+.+
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i~~gh~~~-~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPIFVPHSAD-NW---------YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCEESSCCTT-SC---------CCCSEEEECTT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeEEeeeccc-cc---------CCCCEEEEecC
Confidence            6778896 8899755 688899999999999876 3456666 8897532222221 11         24788876655

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.85  E-value=0.07  Score=40.44  Aligned_cols=39  Identities=21%  Similarity=0.112  Sum_probs=33.9

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      ....+++|+|+|| |+.|+.++..+...|.+|++....+.
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3455789999996 99999999999999999999997653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.79  E-value=0.94  Score=32.47  Aligned_cols=93  Identities=18%  Similarity=0.110  Sum_probs=58.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-CCeeE----ecCChhhHHHHHHHHCCCCccEE
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEKVNLLKNKFG-FDDAF----NYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~~~~~~~~~g-~~~vi----~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      .+|.|.||+|.+|...+.++...|.  ++..++..+.+.+ +. ++. +....    ..... ++.+.++     +.|+|
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~-Dl~~~~~~~~~~~~~~~~-~~~~~~~-----~aDiv   72 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AA-DLSHIETRATVKGYLGPE-QLPDCLK-----GCDVV   72 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HH-HHTTSSSSCEEEEEESGG-GHHHHHT-----TCSEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hH-HHhhhhhhcCCCeEEcCC-ChHHHhC-----CCCEE
Confidence            3789999889999999999998876  6888887666533 33 332 21111    11122 4444443     48999


Q ss_pred             EECCCch----------------hHH---HHHHhhccCCEEEEEccc
Q 019042          232 FENVGGK----------------MLD---AVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       232 id~~g~~----------------~~~---~~~~~l~~~G~~v~~g~~  259 (347)
                      +-+.|.+                .++   ..+....+++.++.+..+
T Consensus        73 Vitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNP  119 (144)
T d1mlda1          73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP  119 (144)
T ss_dssp             EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred             EECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence            9988831                112   223334677888888664

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=92.60  E-value=0.27  Score=35.94  Aligned_cols=142  Identities=15%  Similarity=0.065  Sum_probs=74.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHhCCCe--eEecCChhhHHHHHHHHCCCCccEEE
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKEKVNLLKNKFGFDD--AFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~---~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      |-+|.|.||+|-+|+-.++++..+..   ++...+++........  .....  ..+..+. +         ....|+++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~--~~~~~~~~~~~~~~-~---------~~~~d~~f   68 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK--FKDQDITIEETTET-A---------FEGVDIAL   68 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEE--ETTEEEEEEECCTT-T---------TTTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccc--ccCCcccccccchh-h---------hhhhhhhh
Confidence            34799999999999999999988853   4555554322111000  00111  1111111 1         12589999


Q ss_pred             ECCCch-hHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHHhcc----ceeeeeEecccccchHHHHHHHHHHHH
Q 019042          233 ENVGGK-MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVVGKR----IRMEGFLAGDFYHQYPKFLELVMPAIK  307 (347)
Q Consensus       233 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~  307 (347)
                      -+.+.. ....+......+-+++..+..-...   +.......+.....    .++...     |.=+...+.-+.-+++
T Consensus        69 ~~~~~~~s~~~~~~~~~~~~~VIDlSsdfR~~---~~~~~~~pe~n~~~~~~~~~iIAn-----PgC~tt~i~~l~PL~~  140 (154)
T d2gz1a1          69 FSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQN---PDVPLVVPEVNAHALDAHNGIIAC-----PNAAWNSVQIAETLHE  140 (154)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEECSSTTTTC---TTSCBCCHHHHGGGGGGCCSEEEC-----CCTHHHHHHHHHHHHH
T ss_pred             hccCccchhhHHhhhccccceehhcChhhhcc---CCcccccchhhHHHhcCcCceEEC-----CCCHHHHHHHHHHHHH
Confidence            888874 5556666777788888876532211   11111122222211    112211     1112334555677888


Q ss_pred             cCCcccccceee
Q 019042          308 EGKLVYVEDIAE  319 (347)
Q Consensus       308 ~g~~~~~~~~~~  319 (347)
                      .|.+++.....|
T Consensus       141 ~~lik~~~~~~~  152 (154)
T d2gz1a1         141 RGLVRPTAELKF  152 (154)
T ss_dssp             TTCCSCCSSCCS
T ss_pred             hcCCCccceeee
Confidence            888888765444

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.58  E-value=0.047  Score=41.68  Aligned_cols=35  Identities=11%  Similarity=0.075  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKE  193 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~  193 (347)
                      +++|+|+|| |..|+.++..++..|+ .|+++.+++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999996 9999999999999999 5889887654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.56  E-value=0.21  Score=37.17  Aligned_cols=97  Identities=15%  Similarity=0.099  Sum_probs=65.6

Q ss_pred             cccCCchhhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhh
Q 019042          136 GILGMPGLTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPD  215 (347)
Q Consensus       136 a~l~~~~~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  215 (347)
                      +-+|++....+..|.+..---.|++|+|.|.+.-+|.-++.++...|+.|+.+.+....                     
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~---------------------   75 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH---------------------   75 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---------------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc---------------------
Confidence            34565555555555443333479999999998899999999999999999987754322                     


Q ss_pred             HHHHHHHHCCCCccEEEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          216 LDAALKRCFPEGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       216 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      +.+.++     ..|+++-+.|...+-. -+.++++-.++.+|..
T Consensus        76 l~~~~~-----~aDivi~a~G~~~~i~-~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          76 LDEEVN-----KGDILVVATGQPEMVK-GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             HHHHHT-----TCSEEEECCCCTTCBC-GGGSCTTCEEEECCCB
T ss_pred             HHHHHh-----hccchhhccccccccc-cccccCCCeEeccCcc
Confidence            111111     2788888888753311 2477888888888763

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.53  E-value=0.11  Score=36.24  Aligned_cols=38  Identities=13%  Similarity=0.044  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .++..++|+|.|| |.+|+-.++.++..|.+|+++.+++
T Consensus        18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            4455689999996 9999999999999999999999764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.51  E-value=0.59  Score=35.01  Aligned_cols=81  Identities=14%  Similarity=0.039  Sum_probs=52.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHhCC---------CeeEecCChhhHHHHHHHHCCCCc
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE--KVNLLKNKFGF---------DDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~--~~~~~~~~~g~---------~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      +|.|+|+ |..|.+.+..+...|.+|+...+..+  ..+.+. +-.-         ...+...  .++.+.+.     ..
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~~--~~~~~~~~-----~a   72 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFWP--EQLEKCLE-----NA   72 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEECG--GGHHHHHT-----TC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhcccccccc--ccHHHHHh-----cc
Confidence            5889996 99999999999888999999887543  333332 1110         0011111  15555543     38


Q ss_pred             cEEEECCCchhHHHHHHhhcc
Q 019042          229 DIYFENVGGKMLDAVLLNMRI  249 (347)
Q Consensus       229 d~vid~~g~~~~~~~~~~l~~  249 (347)
                      |+|+-++....++..++.+++
T Consensus        73 d~Ii~avps~~~~~~~~~l~~   93 (180)
T d1txga2          73 EVVLLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             SEEEECSCGGGHHHHHHHHTT
T ss_pred             chhhcccchhhhHHHHHhhcc
Confidence            999999998777777765544

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.50  E-value=0.11  Score=40.63  Aligned_cols=100  Identities=13%  Similarity=0.078  Sum_probs=64.9

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEE
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      ...++.+||=.|  .|.|..+..+++..+.+|++++-+++-.+.+++.+...  ..+.+... ++.+ + ....+.+|+|
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d~~~-~-~~~~~~fD~I  131 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-GLQD-F-TPEPDSYDVI  131 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-CGGG-C-CCCSSCEEEE
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-cccc-c-cccccccccc
Confidence            456778999998  47788888888777779999999999888888433221  11122111 2111 0 0112378999


Q ss_pred             EECCC-----c----hhHHHHHHhhccCCEEEEEcc
Q 019042          232 FENVG-----G----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       232 id~~g-----~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +....     .    ..+..+.+.|+++|.++....
T Consensus       132 ~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         132 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            87432     1    256778889999999987754

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=92.44  E-value=0.22  Score=38.92  Aligned_cols=93  Identities=9%  Similarity=0.031  Sum_probs=59.1

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC-eeEecCChhhHHHHHHHHC-CCCccE
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD-DAFNYKKEPDLDAALKRCF-PEGIDI  230 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~-~~~~d~  230 (347)
                      ...-++++||=+|  .|.|..+..+++ .|.+|++++.+++..+.+++.+.-. ..+. .   ++.    ... ++.+|+
T Consensus        16 ~~~~~~~~VLDiG--cG~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~-~---~~~----~~~~~~~fD~   84 (225)
T d2p7ia1          16 TPFFRPGNLLELG--SFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIH-S---RFE----DAQLPRRYDN   84 (225)
T ss_dssp             GGGCCSSCEEEES--CTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEE-S---CGG----GCCCSSCEEE
T ss_pred             hhhCCCCcEEEEe--CCCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccc-c---ccc----cccccccccc
Confidence            3445567899988  456877776654 5889999999999999988444321 1222 1   111    112 237999


Q ss_pred             EEECCCch-------hHHHHH-HhhccCCEEEEE
Q 019042          231 YFENVGGK-------MLDAVL-LNMRIHGRIAVC  256 (347)
Q Consensus       231 vid~~g~~-------~~~~~~-~~l~~~G~~v~~  256 (347)
                      |+..---.       .+.... ++|+++|.++..
T Consensus        85 I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          85 IVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            98533212       345555 579999998865

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=92.42  E-value=0.17  Score=41.15  Aligned_cols=96  Identities=17%  Similarity=0.151  Sum_probs=65.4

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHHHC-CC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKRCF-PE  226 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~-~~  226 (347)
                      .++.++.+||=.|.  |.|..+..+++..  +.+|++++.+++-.+.+++.+   +....+...   |+.    ++. ++
T Consensus        23 ~~~~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~---d~~----~~~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEG---DAT----EIELND   93 (281)
T ss_dssp             SCCCSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEES---CTT----TCCCSS
T ss_pred             hccCCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccc---ccc----cccccC
Confidence            35677889998883  5788888998875  579999999998888777433   222111111   211    111 23


Q ss_pred             CccEEEECCC-----c--hhHHHHHHhhccCCEEEEEc
Q 019042          227 GIDIYFENVG-----G--KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       227 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+|+|+....     .  ..+..+.+.|+++|.+++..
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            6999986543     2  26788999999999998765

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.34  E-value=0.12  Score=35.98  Aligned_cols=34  Identities=21%  Similarity=0.182  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .++++|.|| |.+|+-+++.+..+|.+|+++.+.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            478999996 9999999999999999999999775

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.33  E-value=0.84  Score=37.74  Aligned_cols=33  Identities=15%  Similarity=0.140  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG  190 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~  190 (347)
                      .+++||+||+|-+|...+..+...|.+|+++++
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            468999999999999999999999999999974

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=92.27  E-value=0.054  Score=44.20  Aligned_cols=34  Identities=15%  Similarity=0.146  Sum_probs=30.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      ++|||+||+|-+|...+..+...|.+|++++++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            4799999999999999999999999999999753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.19  E-value=0.075  Score=42.54  Aligned_cols=33  Identities=15%  Similarity=0.052  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      .++|+|+|| |..|++++..++..|.+|+++.++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            578999996 999999999999999999999864

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.18  E-value=0.17  Score=41.95  Aligned_cols=97  Identities=20%  Similarity=0.130  Sum_probs=54.1

Q ss_pred             hhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH--HHhCCC---eeEecCChhhHHHHHHH
Q 019042          149 LYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLK--NKFGFD---DAFNYKKEPDLDAALKR  222 (347)
Q Consensus       149 l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~--~~~g~~---~vi~~~~~~~~~~~i~~  222 (347)
                      +.+.....+|++||-+|+  |.|.+++.+|+ .|+ +|+++..++.-....+  .+.+..   .++..+-. ++     .
T Consensus        27 i~~~~~~~~~~~VLDiGc--G~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~-~l-----~   97 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGC--GTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIE-EV-----H   97 (311)
T ss_dssp             HHHCGGGTTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTT-TS-----C
T ss_pred             HHhccccCCcCEEEEECC--CCCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHH-Hh-----c
Confidence            444446678999999995  36666666665 576 8999998875322111  033332   22322211 11     0


Q ss_pred             HCCCCccEEEECC-C----ch----h-HHHHHHhhccCCEEE
Q 019042          223 CFPEGIDIYFENV-G----GK----M-LDAVLLNMRIHGRIA  254 (347)
Q Consensus       223 ~~~~~~d~vid~~-g----~~----~-~~~~~~~l~~~G~~v  254 (347)
                      ...+.+|+|+... +    .+    . +...-+.|+|+|+++
T Consensus        98 ~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          98 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            1113799998522 1    11    2 222345799999886

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.07  E-value=0.13  Score=37.46  Aligned_cols=88  Identities=22%  Similarity=0.139  Sum_probs=49.3

Q ss_pred             EEEEEcCCChHHHHHHHH-HHHCC---CEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEEEE
Q 019042          160 YVYVSAASGAVGQLVGQF-AKLVG---CYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIYFE  233 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~ql-a~~~G---~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~vid  233 (347)
                      +|.|.||+|-+|+-.+++ +.+..   .+++...++.......  .++..  .+.+..+   .. .+.     ++|++|-
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~--~~~~~~~~~~~~~~---~~-~~~-----~~DivF~   71 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAP--SFGGTTGTLQDAFD---LE-ALK-----ALDIIVT   71 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCC--GGGTCCCBCEETTC---HH-HHH-----TCSEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccc--cccCCceeeecccc---hh-hhh-----cCcEEEE
Confidence            699999999999999975 44332   3676666553321111  11111  1122111   11 121     4899999


Q ss_pred             CCCchhHHHHHHhhccCC---EEEEEcc
Q 019042          234 NVGGKMLDAVLLNMRIHG---RIAVCGM  258 (347)
Q Consensus       234 ~~g~~~~~~~~~~l~~~G---~~v~~g~  258 (347)
                      |.+.+.-......+...|   .++..+.
T Consensus        72 a~~~~~s~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          72 CQGGDYTNEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             ecCchHHHHhhHHHHhcCCCeecccCCc
Confidence            999875555555554544   3555544

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=92.06  E-value=0.31  Score=38.81  Aligned_cols=100  Identities=14%  Similarity=0.120  Sum_probs=62.8

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCCC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ....+....+||=+|  +|.|..++.++++. +.++++++.+ +..+.+++   +.|....+..... |+.    +..+.
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~-D~~----~~~~~  145 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEG-DFF----EPLPR  145 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSS
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhccc-cch----hhccc
Confidence            445667778999998  57899999999988 6799988864 33333332   3343221222211 221    11123


Q ss_pred             CccEEEECCC-----c----hhHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFENVG-----G----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ++|+|+-..-     .    ..+..+.+.|+|+|++++...
T Consensus       146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            6899875432     1    247788899999999998754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.05  E-value=0.062  Score=45.13  Aligned_cols=73  Identities=12%  Similarity=0.068  Sum_probs=45.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCCCeeE--ecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKFGFDDAF--NYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi--~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|||+||+|-+|...++.+...| .+|++++....+...+.+.-.. ..+  |..+..++.+.+.+    ++|+||.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~-~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF-HFVEGDISIHSEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTE-EEEECCTTTCSHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCe-EEEECccCChHHHHHHHHh----CCCccccccc
Confidence            59999999999999998887888 5899998765443333211111 122  22221133333322    4899999887


Q ss_pred             c
Q 019042          237 G  237 (347)
Q Consensus       237 ~  237 (347)
                      -
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.02  E-value=2.4  Score=34.05  Aligned_cols=104  Identities=14%  Similarity=0.129  Sum_probs=65.1

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCCeeEecCCh----------------
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGFDDAFNYKKE----------------  213 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~vi~~~~~----------------  213 (347)
                      ..+.++.+|+.. .+|..|++++..++.+|.+++++..   ++.+.+.++ .+|+.-++...+.                
T Consensus        55 g~~~~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          55 GEIKPGDVLIEA-TSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             TSCCTTSEEEEE-CCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             CCcCCCceeeee-cccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccccc
Confidence            445556655554 4799999999999999997666654   567788888 9998533221111                


Q ss_pred             -----------hh-------HHHHHHHHCCCCccEEEECCCc-h---hHHHHHHhhccCCEEEEEcc
Q 019042          214 -----------PD-------LDAALKRCFPEGIDIYFENVGG-K---MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       214 -----------~~-------~~~~i~~~~~~~~d~vid~~g~-~---~~~~~~~~l~~~G~~v~~g~  258 (347)
                                 +.       ...++.+-.++.+|.++-+.|+ .   .+...++...+..+++.+..
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                       00       1111222233468999988876 3   34455666677788776543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.00  E-value=0.074  Score=43.45  Aligned_cols=33  Identities=24%  Similarity=0.156  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      +++|+|+|| |..|+.++..++..|.+|+++..+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            578999996 999999999999999999999865

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.88  E-value=0.4  Score=39.48  Aligned_cols=97  Identities=12%  Similarity=0.086  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCC-ee-----EecCChhhHHHHHHHHCCCCcc
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFD-DA-----FNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~-~v-----i~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ..++|||+|  ||-|..+-.+++.... +|.++.-+++-.+.+++-+... ..     ++..-. |..+-+++ +.+.+|
T Consensus       106 ~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~yD  181 (312)
T d2b2ca1         106 DPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEFD  181 (312)
T ss_dssp             SCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCEE
T ss_pred             CCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEc-hHHHHHHh-CCCCCC
Confidence            457899999  4667777788887765 8999999998888888333210 00     111111 44455554 445799


Q ss_pred             EEEECCCc-----------hhHHHHHHhhccCCEEEEEc
Q 019042          230 IYFENVGG-----------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       230 ~vid~~g~-----------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +||--...           +.++.+.++|+++|.++.-+
T Consensus       182 vII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         182 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             EEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            98743221           14677788999999998654

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=91.86  E-value=0.27  Score=39.85  Aligned_cols=95  Identities=14%  Similarity=0.089  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh----CC--C---eeEecCChhhHHHHHHHHCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKF----GF--D---DAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~----g~--~---~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ...++|||+|  ||-|..+..+++..+. +|.++.-+++=.+.+++-+    ++  +   .++..    |..+-+++ ++
T Consensus        74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~----D~~~~l~~-~~  146 (274)
T d1iy9a_          74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD----DGFMHIAK-SE  146 (274)
T ss_dssp             SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES----CSHHHHHT-CC
T ss_pred             CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec----hHHHHHhh-cC
Confidence            3457999999  5667778888887765 9999999998777777322    22  1   22322    33334443 33


Q ss_pred             CCccEEEECC-C---------c-hhHHHHHHhhccCCEEEEEc
Q 019042          226 EGIDIYFENV-G---------G-KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       226 ~~~d~vid~~-g---------~-~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ..+|+|+--. .         + +.++.+.++|+++|.++.-.
T Consensus       147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            4799986432 2         1 24778888999999998643

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=91.64  E-value=0.3  Score=40.39  Aligned_cols=93  Identities=19%  Similarity=0.169  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh-----CC--C---eeEecCChhhHHHHHHHHCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKEKVNLLKNKF-----GF--D---DAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~~~~~~~~~~~~-----g~--~---~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ..++|||+|+  |.|..+.++++... .+|.++.-+++-.+.+++-+     ++  +   .++. .   |..+-+++ ++
T Consensus        77 ~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-~---Da~~~l~~-~~  149 (312)
T d1uira_          77 EPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-D---DARAYLER-TE  149 (312)
T ss_dssp             CCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-S---CHHHHHHH-CC
T ss_pred             CcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-c---hHHHHhhh-cC
Confidence            4579999994  56777778888764 59999999998777777333     11  1   1221 1   44445544 44


Q ss_pred             CCccEEE-ECC---Cc----------hhHHHHHHhhccCCEEEEE
Q 019042          226 EGIDIYF-ENV---GG----------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       226 ~~~d~vi-d~~---g~----------~~~~~~~~~l~~~G~~v~~  256 (347)
                      +.+|+|| |..   +.          +.+..+.++|+++|.++.-
T Consensus       150 ~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             CcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            5799986 331   21          1357788899999998753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.61  E-value=0.17  Score=35.38  Aligned_cols=39  Identities=13%  Similarity=0.161  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      .+.++++++|.|+ |.+|.-++..++..|.+|+.+.+++.
T Consensus        26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            4567899999996 99999999999999999999997753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.50  E-value=0.25  Score=39.16  Aligned_cols=89  Identities=17%  Similarity=0.086  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-eeEecCChhhHHHHHHHHC-CCCccE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-DAFNYKKEPDLDAALKRCF-PEGIDI  230 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~-~~~~d~  230 (347)
                      .++++||=+|+  |.|..+..+++ .|.+|++++.+++-++.+++..   +.. ..+..    |+    ..+. .+.+|+
T Consensus        36 ~~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~----d~----~~~~~~~~fD~  104 (246)
T d1y8ca_          36 LVFDDYLDLAC--GTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ----DI----SNLNINRKFDL  104 (246)
T ss_dssp             CCTTEEEEETC--TTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC----CG----GGCCCSCCEEE
T ss_pred             CCCCeEEEEeC--cCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeecc----ch----hhhcccccccc
Confidence            34578999985  46777777765 5889999999998777776432   322 22211    21    1122 237999


Q ss_pred             EEECCCc-----------hhHHHHHHhhccCCEEEE
Q 019042          231 YFENVGG-----------KMLDAVLLNMRIHGRIAV  255 (347)
Q Consensus       231 vid~~g~-----------~~~~~~~~~l~~~G~~v~  255 (347)
                      |+...+.           ..++.+.++|+++|.++.
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9964331           146778889999999885

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=91.46  E-value=0.81  Score=33.60  Aligned_cols=136  Identities=10%  Similarity=0.058  Sum_probs=79.0

Q ss_pred             EEEEEcCCChHHHH-HHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc
Q 019042          160 YVYVSAASGAVGQL-VGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~-a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~  237 (347)
                      +|.|+|+ |.+|.. .+..++.. +..++++++++++.+.+.+.++...+++     ++.+.+.    ..+|+|+-|+..
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll~----~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT-----DYRDVLQ----YGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS-----STTGGGG----GCCSEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc-----cHHHhcc----cccceecccccc
Confidence            5889994 999854 45566555 5577777788888777776788754432     2222221    248999988877


Q ss_pred             -hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHH-hccceeeeeEecccccchHHHHHHHHHHHHcCCcccc
Q 019042          238 -KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV-GKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV  314 (347)
Q Consensus       238 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  314 (347)
                       .+...+..+++.+=. |.+.-+-..+.   .....+.... .++..+. ....    .+...+.++.+.+..|++-..
T Consensus        73 ~~H~~~~~~al~~gk~-V~~EKP~~~~~---~e~~~l~~~a~~~~~~~~-vg~~----r~~~~~~~~~~~~~~G~ig~~  142 (167)
T d1xeaa1          73 DVHSTLAAFFLHLGIP-TFVDKPLAASA---QECENLYELAEKHHQPLY-VGFN----GFDAMVQDWLQVAAAGKLPTH  142 (167)
T ss_dssp             GGHHHHHHHHHHTTCC-EEEESCSCSSH---HHHHHHHHHHHHTTCCEE-EECG----THHHHHHHHHHHHHHTCCCHH
T ss_pred             cccccccccccccccc-cccCCCCcCCH---HHHHHHHHHHHHcCCEEE-EEeC----cCCHHHHHHHHHhhcCCCCcE
Confidence             477778888887654 55554322110   0111122222 2333321 1111    234557788888888888643

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.28  E-value=0.18  Score=35.13  Aligned_cols=46  Identities=20%  Similarity=0.235  Sum_probs=36.1

Q ss_pred             hhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       143 ~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .+++.++ .. . +..++++|.|+ |.+|+=.++.++.+|.+|+++.+++
T Consensus        10 ~~s~~~l-~l-~-~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          10 VDSTGAL-DF-Q-NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EEHHHHT-SC-S-SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EchhHhh-Cc-c-cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            4555555 32 2 23478999996 9999999999999999999999764

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.26  E-value=0.44  Score=38.53  Aligned_cols=94  Identities=15%  Similarity=0.050  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC---------------eeEecCChhhHHHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD---------------DAFNYKKEPDLDAAL  220 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~---------------~vi~~~~~~~~~~~i  220 (347)
                      .+.++|||.|+  |-|..+-.+++.-..+|.++.-+++=.+.+++-++..               +++..    |..+-+
T Consensus        71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~----Da~~~l  144 (276)
T d1mjfa_          71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG----DGFEFI  144 (276)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES----CHHHHH
T ss_pred             CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC----hHHHHH
Confidence            44579999995  4555566666654458999999988878887333221               22222    333444


Q ss_pred             HHHCCCCccEEEE-CCCc----------hhHHHHHHhhccCCEEEEEc
Q 019042          221 KRCFPEGIDIYFE-NVGG----------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       221 ~~~~~~~~d~vid-~~g~----------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      ++  .+.+|+||- ....          +.+..+.++|+++|.++.-.
T Consensus       145 ~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         145 KN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            43  347999864 3321          24677888999999987543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.25  E-value=0.25  Score=39.21  Aligned_cols=35  Identities=20%  Similarity=0.363  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      -+|.+|+|+| .|.+|..+++++...|++|++++.+
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            4789999999 5999999999999999999987743

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.13  E-value=0.012  Score=44.17  Aligned_cols=92  Identities=21%  Similarity=0.187  Sum_probs=56.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhC----CC--eeEecCChhhHHHHHHHHCCCCccEEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFG----FD--DAFNYKKEPDLDAALKRCFPEGIDIYF  232 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g----~~--~vi~~~~~~~~~~~i~~~~~~~~d~vi  232 (347)
                      +|.|+|++|-+|++.++++... ++++.+...++.....-+ .+|    ..  .+...+   ++.+.     ...+|+++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~~~~~~~~~~~~~~---~~~~~-----~~~~DViI   76 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGELAGAGKTGVTVQS---SLDAV-----KDDFDVFI   76 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTCSSSSSCCSCCEES---CSTTT-----TTSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhhhhccccCCceeec---cHHHH-----hcccceEE
Confidence            6899999999999999999876 667766553332110000 111    10  000011   11111     12589999


Q ss_pred             ECCCchhHHHHHHhhccCCEEEEEcccc
Q 019042          233 ENVGGKMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       233 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      |.+..+.....++.....|.=+.+|+++
T Consensus        77 DFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          77 DFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             EeccHHHHHHHHHHHHhccceeEEecCC
Confidence            9998877777778777778777788765

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.13  E-value=0.16  Score=35.22  Aligned_cols=34  Identities=24%  Similarity=0.114  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .++++|.|+ |.+|+-+++.++.+|.+|+++.+.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            468999996 9999999999999999999998765

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.10  E-value=0.63  Score=37.74  Aligned_cols=95  Identities=13%  Similarity=0.134  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC----C----C-eeEecCChhhHHHHHHHHCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFG----F----D-DAFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g----~----~-~vi~~~~~~~~~~~i~~~~~  225 (347)
                      ...++|||.|  ||-|..+-.+++..+. +|+++.-+++-.+.+++-+.    .    . +++. .   |..+-+++ +.
T Consensus        77 ~~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~-~---Da~~~l~~-~~  149 (285)
T d2o07a1          77 PNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV-G---DGFEFMKQ-NQ  149 (285)
T ss_dssp             SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-S---CHHHHHHT-CS
T ss_pred             cCcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE-c---cHHHHHhc-CC
Confidence            3457999999  4567777788887655 99999999887777773221    1    1 2221 1   44444543 34


Q ss_pred             CCccEEE-ECCCc----------hhHHHHHHhhccCCEEEEEc
Q 019042          226 EGIDIYF-ENVGG----------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       226 ~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      +.+|+|| |....          +.++.+.++|+++|.++.-.
T Consensus       150 ~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         150 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            4799986 33321          24677888999999988653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.51  Score=39.22  Aligned_cols=31  Identities=23%  Similarity=0.129  Sum_probs=28.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEe
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSA  189 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~  189 (347)
                      ++|||+||+|-+|...+..+...|.+|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            6899999999999999999999999999985

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.07  E-value=0.72  Score=34.79  Aligned_cols=85  Identities=18%  Similarity=0.168  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      .+.+|.|+| .|.+|...+++++..|.+|+..++....        .......+.   ++.+.+++     .|+++-+..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKL--------PLGNATQVQ---HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCC--------CCTTCEECS---CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccc--------hhhhhhhhh---hHHHHHhh-----ccceeeccc
Confidence            578999999 5999999999999999999999865331        111112222   45555544     789887765


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEcc
Q 019042          237 G-K-----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~-~-----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      - +     .-...++.|+++..+|.++-
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence            2 2     23667788999888888765

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.93  E-value=0.19  Score=35.22  Aligned_cols=34  Identities=15%  Similarity=0.151  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .++++|+|| |.+|+-.++.+..+|.+|+++.+++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            468999996 9999999999999999999999764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.86  E-value=0.11  Score=37.90  Aligned_cols=33  Identities=18%  Similarity=0.165  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG  190 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~  190 (347)
                      +|.+|||.|| |.+|..-+..+...|++|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            5789999996 99999999999999999998864

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.70  E-value=1.8  Score=30.07  Aligned_cols=38  Identities=24%  Similarity=0.228  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      -+.++.+|+++|.+|..|..-++..+.+|-+|++-+..
T Consensus        11 li~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtP   48 (130)
T d1euca1          11 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTP   48 (130)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred             EEcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeecc
Confidence            45678899999999999999999999999998877744

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=90.60  E-value=0.14  Score=41.59  Aligned_cols=62  Identities=11%  Similarity=0.223  Sum_probs=39.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|||+||+|-+|...+..+...|. ++++.+...       .+    ..|..+...+.+.++..   ++|+||.+++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~-------~~----~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK-------EF----CGDFSNPKGVAETVRKL---RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS-------SS----CCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc-------cc----cCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence            599999999999998887777664 555554321       11    12333332344444432   5899999986

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=90.58  E-value=0.055  Score=41.27  Aligned_cols=92  Identities=11%  Similarity=0.004  Sum_probs=55.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---hCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNK---FGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +|.|.||+|-+|+-.++++..+ .+++..+.++...-..+.+.   +...........   .    .....++|++|.|.
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~Dvvf~al   79 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAV---K----DADFSNVDAVFCCL   79 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCG---G----GCCGGGCSEEEECC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhh---h----hhhhcccceeeecc
Confidence            6899999999999999999887 55777666443322222201   111100000000   0    00002589999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEcc
Q 019042          236 GGKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ...........+...+.++....
T Consensus        80 p~~~s~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          80 PHGTTQEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             SSSHHHHHHHTSCSSCEEEECSS
T ss_pred             ccchHHHHHHHHHhcCcccccch
Confidence            88666666677888888876544

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.55  E-value=0.13  Score=42.96  Aligned_cols=33  Identities=21%  Similarity=0.304  Sum_probs=29.7

Q ss_pred             EE-EEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          160 YV-YVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       160 ~v-lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      +| ||+||+|-+|...+..+...|++|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            57 9999999999999999988999999999753

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.53  E-value=0.61  Score=36.91  Aligned_cols=97  Identities=11%  Similarity=0.066  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCeeEecCChhhHHHHHHH-H-CCCCc
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFDDAFNYKKEPDLDAALKR-C-FPEGI  228 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~-~-~~~~~  228 (347)
                      -+.++++||=.|.  |.|..+..+++.-..+|++++.+++-.+.+++..   +...-+..... |.   ... . ..+.+
T Consensus        21 ~~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~-D~---~~~~~~~~~~f   94 (252)
T d1ri5a_          21 YTKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ-DS---YGRHMDLGKEF   94 (252)
T ss_dssp             HCCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES-CT---TTSCCCCSSCE
T ss_pred             hCCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc-ch---hhhcccccccc
Confidence            4578999999984  4466677777765558999999999888887432   22111111111 11   000 1 12269


Q ss_pred             cEEEECCCch-----------hHHHHHHhhccCCEEEEE
Q 019042          229 DIYFENVGGK-----------MLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       229 d~vid~~g~~-----------~~~~~~~~l~~~G~~v~~  256 (347)
                      |+|+....-.           .+..+.++|+++|.++..
T Consensus        95 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          95 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             eEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            9998654321           345667899999998864

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.43  E-value=1.2  Score=32.84  Aligned_cols=99  Identities=14%  Similarity=0.097  Sum_probs=59.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHhCCC-----eeEecCCh----------hhHHHHHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS--KEKVNLLKNKFGFD-----DAFNYKKE----------PDLDAALKR  222 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~--~~~~~~~~~~~g~~-----~vi~~~~~----------~~~~~~i~~  222 (347)
                      +|.|.| -|-+|.++.+.+...+.++.++...  .+.+.++. ++-..     ..+..++.          -.......+
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            588998 6999999999888778888777643  33444444 33210     00111000          000001222


Q ss_pred             HCCC--CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          223 CFPE--GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       223 ~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      +.++  ++|+|+||+|. .....+..+++.+-+-|++..+.
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            3333  79999999998 56778888888776556665543

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=90.11  E-value=2.1  Score=32.56  Aligned_cols=105  Identities=14%  Similarity=0.101  Sum_probs=65.8

Q ss_pred             hhHHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHH
Q 019042          143 LTAYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDA  218 (347)
Q Consensus       143 ~tA~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~  218 (347)
                      -.-|..++.  +  .+..||=+|  .|.|..++.+|+.. ..++++++.+......+.+   +.+...+--...  |...
T Consensus        19 ~~~w~~~F~--~--~~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~--Da~~   90 (204)
T d2fcaa1          19 KGKWNTVFG--N--DNPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI--DADT   90 (204)
T ss_dssp             TTCHHHHHT--S--CCCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC--CGGG
T ss_pred             HhHHHHHcC--C--CCceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc--chhh
Confidence            444666653  2  234667777  57899999999987 7799999999887655542   456543321111  2222


Q ss_pred             HHHHHCC-CCccEEEECCCc---------------hhHHHHHHhhccCCEEEEE
Q 019042          219 ALKRCFP-EGIDIYFENVGG---------------KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       219 ~i~~~~~-~~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~~  256 (347)
                       +.+..+ +.+|.|+-....               +.+..+.+.|+|||.+.+.
T Consensus        91 -l~~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1          91 -LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             -HHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             -hhcccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence             223333 367776643322               3577888999999998765

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.10  E-value=0.96  Score=36.27  Aligned_cols=103  Identities=13%  Similarity=0.069  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHC-----C--CEEEEEeCCHHHHHHHHHHhCC-----CeeEecCCh--hhHHHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLV-----G--CYVVGSAGSKEKVNLLKNKFGF-----DDAFNYKKE--PDLDAA  219 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~-----G--~~V~~~~~~~~~~~~~~~~~g~-----~~vi~~~~~--~~~~~~  219 (347)
                      ..+++-+||=+|+  |.|..+..+++..     +  .++++++.++.-.+.+++.+.-     ...++....  +++...
T Consensus        37 ~~~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (280)
T d1jqea_          37 DTKSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSR  114 (280)
T ss_dssp             TTCSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHH
T ss_pred             cCCCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcch
Confidence            3344457888884  4555555555432     3  3688999998887777744322     112333222  122222


Q ss_pred             HHHHCC-CCccEEEECCC-----c--hhHHHHHHhhccCCEEEEEcc
Q 019042          220 LKRCFP-EGIDIYFENVG-----G--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       220 i~~~~~-~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ...... +.+|+|+..-.     .  ..+..+.++|+++|.+++...
T Consensus       115 ~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         115 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             HTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            222222 37999987443     2  378889999999999887643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.07  E-value=0.27  Score=34.92  Aligned_cols=39  Identities=15%  Similarity=-0.009  Sum_probs=34.1

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      ..+.++++++|.|+ |.+|+-++..++..|.+|+.+.+.+
T Consensus        30 ~~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          30 RQLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             HhhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            35567889999996 9999999999999999999999765

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.96  E-value=2.8  Score=31.48  Aligned_cols=105  Identities=18%  Similarity=0.245  Sum_probs=64.3

Q ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh---CCC-eeEecCChhhHHHHHHHHCCC
Q 019042          152 LCSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKF---GFD-DAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       152 ~~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ...+.+++.+ |-. +-|.|-.+..+++.. +.+|++++.+++..+.+++.+   +.. ..++.+-. ++...+.....+
T Consensus        18 ~l~~~~~~~~-lD~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~-~~~~~~~~~~~~   94 (192)
T d1m6ya2          18 FLKPEDEKII-LDC-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR-EADFLLKTLGIE   94 (192)
T ss_dssp             HHCCCTTCEE-EET-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG-GHHHHHHHTTCS
T ss_pred             hhCCCCCCEE-EEe-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh-hHHHHHHHcCCC
Confidence            3467788755 444 344555555666655 679999999999888887433   322 22332222 555555554334


Q ss_pred             CccEEEECCCc----------------hhHHHHHHhhccCCEEEEEccc
Q 019042          227 GIDIYFENVGG----------------KMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       227 ~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      .+|.|+--.|-                ..+..+.+.|+++|+++++...
T Consensus        95 ~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~  143 (192)
T d1m6ya2          95 KVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH  143 (192)
T ss_dssp             CEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred             CcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence            78877433331                1456677788999998877653

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.96  E-value=0.19  Score=41.78  Aligned_cols=91  Identities=23%  Similarity=0.152  Sum_probs=51.9

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCCC
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~~  226 (347)
                      .+.+|++||-+|+  |.|.+++.+|+ .|+ +|++++.++.- ..+++   .-+...   ++..+.. ++     ....+
T Consensus        30 ~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~~-~~a~~~~~~n~~~~~v~~~~~~~~-~~-----~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSIS-DYAVKIVKANKLDHVVTIIKGKVE-EV-----ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTTH-HHHHHHHHHTTCTTTEEEEESCTT-TC-----CCSSS
T ss_pred             ccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHHH-hhhhhHHHHhCCccccceEeccHH-Hc-----ccccc
Confidence            4568999999984  35777766555 676 89999987642 22221   223321   2222221 11     01113


Q ss_pred             CccEEEECCCc------h----hHHHHHHhhccCCEEE
Q 019042          227 GIDIYFENVGG------K----MLDAVLLNMRIHGRIA  254 (347)
Q Consensus       227 ~~d~vid~~g~------~----~~~~~~~~l~~~G~~v  254 (347)
                      .+|+|+...-.      .    .+...-++|+|+|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            68998753221      1    3344557999999886

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.88  E-value=0.17  Score=35.51  Aligned_cols=36  Identities=22%  Similarity=0.166  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      ..++++|.|+ |-+|+=.++.++.+|.+|+++.+++.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            3579999996 99999999999999999999997753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.81  E-value=0.19  Score=39.58  Aligned_cols=37  Identities=19%  Similarity=0.206  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      ..+++|+|+|| |..|+.++..++..|.+|+++..+++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            45789999996 99999999999999999999987653

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=89.78  E-value=2  Score=29.30  Aligned_cols=90  Identities=17%  Similarity=0.156  Sum_probs=55.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +.++.+|+|+|.+|.-|..-++..+.+|-+|++-+...+.-+.   -.| -.++|     ...+.+++. +  +|.-+=.
T Consensus         3 i~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~---~~g-iPVf~-----sV~eAv~~~-~--~~~SvIf   70 (119)
T d2nu7a1           3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTT---HLG-LPVFN-----TVREAVAAT-G--ATASVIY   70 (119)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEE---ETT-EEEES-----SHHHHHHHH-C--CCEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcc---cCC-Cchhh-----HHHHHHHHh-C--CCeEEEe
Confidence            3567899999999999999999999999998877754321110   011 13443     344444442 2  4444444


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEE
Q 019042          235 VGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       235 ~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      +.. ...+.++..+..+=+++.+
T Consensus        71 VPp~~a~dA~~EAi~agI~~iV~   93 (119)
T d2nu7a1          71 VPAPFCKDSILEAIDAGIKLIIT   93 (119)
T ss_dssp             CCGGGHHHHHHHHHHTTCSEEEE
T ss_pred             ccHHHHHHHHHHHHHCCCCEEEE
Confidence            444 3556667777666444433

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=89.74  E-value=0.45  Score=39.33  Aligned_cols=102  Identities=15%  Similarity=0.037  Sum_probs=61.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CC--C--eeEecCChhhHHHHHHHHC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKF---GF--D--DAFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~---g~--~--~vi~~~~~~~~~~~i~~~~  224 (347)
                      ..+.+|++||=..+  ++|-.++..+ ..|+ +|+.++.++...+.+++.+   |.  .  ..+..+.. ++.+.+.+ .
T Consensus       140 ~~~~~g~~VLdlf~--~~G~~sl~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~-~~l~~~~~-~  214 (317)
T d2b78a2         140 NGSAAGKTVLNLFS--YTAAFSVAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF-DYFKYARR-H  214 (317)
T ss_dssp             HTTTBTCEEEEETC--TTTHHHHHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH-HHHHHHHH-T
T ss_pred             HHhhCCCceeecCC--CCcHHHHHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH-HHHHHHHh-h
Confidence            46678999987753  4444444443 4577 8999999988777776543   22  1  12222211 33333322 1


Q ss_pred             CCCccEEEECCCc----------------hhHHHHHHhhccCCEEEEEccc
Q 019042          225 PEGIDIYFENVGG----------------KMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       225 ~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      ++.||+||---..                +.+..++++|+++|.++.+..+
T Consensus       215 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         215 HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             cCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            2379998753220                1566788999999999987653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.70  E-value=0.21  Score=34.49  Aligned_cols=34  Identities=18%  Similarity=0.209  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      +++++|.|+ |.+|+-+++.++..|.+|+++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            378999996 9999999999999999999998764

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.69  E-value=0.77  Score=38.82  Aligned_cols=94  Identities=18%  Similarity=0.154  Sum_probs=63.2

Q ss_pred             EEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCCe--------------eEecCChhhHHHHHHHHC
Q 019042          163 VSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKF---GFDD--------------AFNYKKEPDLDAALKRCF  224 (347)
Q Consensus       163 I~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~---g~~~--------------vi~~~~~~~~~~~i~~~~  224 (347)
                      |..+.++.|..++..|+..|+ +|++.+-+++-.+.+++.+   +...              .+..... |....+.+ .
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-Da~~~~~~-~  126 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-DANRLMAE-R  126 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-CHHHHHHH-S
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh-hhhhhhHh-h
Confidence            334457889999999998888 8999999999888887533   1110              1111111 33333332 2


Q ss_pred             CCCccEE-EECCCc--hhHHHHHHhhccCCEEEEEcc
Q 019042          225 PEGIDIY-FENVGG--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       225 ~~~~d~v-id~~g~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +..+|+| +|-.|+  +.++.+++.++.+|-+..+.+
T Consensus       127 ~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTaT  163 (375)
T d2dula1         127 HRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTAT  163 (375)
T ss_dssp             TTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEec
Confidence            2369976 888887  488999999999988776643

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=89.65  E-value=2.1  Score=29.30  Aligned_cols=90  Identities=17%  Similarity=0.133  Sum_probs=57.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +.++.+|+|+|.+|..|..-++.++.+|-+|++-+...+.-+...   | -.++|     ...+.+++ +  ++|.-+=.
T Consensus         4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~---g-iPVf~-----tV~eAv~~-~--~~d~SvIf   71 (121)
T d1oi7a1           4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL---G-VPVYD-----TVKEAVAH-H--EVDASIIF   71 (121)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET---T-EEEES-----SHHHHHHH-S--CCSEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE---C-CchHh-----hHHHHHHh-c--CCeEEEEe
Confidence            356779999999999999999999999999888775432211110   1 12443     34445544 3  26665555


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEE
Q 019042          235 VGG-KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       235 ~g~-~~~~~~~~~l~~~G~~v~~  256 (347)
                      +.. ...+.++..+..+=.++.+
T Consensus        72 VPp~~a~dAi~EAi~agI~liv~   94 (121)
T d1oi7a1          72 VPAPAAADAALEAAHAGIPLIVL   94 (121)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             eCHHHHHHHHHHHHhCCCcEEEE
Confidence            665 3566677777777555444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.56  E-value=1.3  Score=31.78  Aligned_cols=37  Identities=27%  Similarity=0.136  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCCHHH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKEK  194 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~--~V~~~~~~~~~  194 (347)
                      .+.+|.|+|+ |.+|...++.+...|.  ++...+..+++
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            4568999996 9999998888887764  78889888775

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=89.52  E-value=0.16  Score=37.07  Aligned_cols=83  Identities=14%  Similarity=0.111  Sum_probs=50.6

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCchhHH
Q 019042          162 YVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGKMLD  241 (347)
Q Consensus       162 lI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~  241 (347)
                      -++| +|.+|...++.++..+..+.+..|+.++.+.+.+..+. ...+..+.      +     ...|+||-|+....+.
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~~~~~~~~------~-----~~~DiVil~v~d~~i~   69 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAATLEKH------P-----ELNGVVFVIVPDRYIK   69 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-CCCSSCCC------C-----C---CEEECSCTTTHH
T ss_pred             EEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-cccchhhh------h-----ccCcEEEEeccchhhh
Confidence            4678 59999888776655333345788999998888844443 22222111      0     2479999999888888


Q ss_pred             HHHHhhccCCE-EEEEc
Q 019042          242 AVLLNMRIHGR-IAVCG  257 (347)
Q Consensus       242 ~~~~~l~~~G~-~v~~g  257 (347)
                      .....++..+. ++.+.
T Consensus        70 ~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          70 TVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHTTTCCSSCCEEECC
T ss_pred             HHHhhhcccceeeeecc
Confidence            88888875554 44444

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.47  E-value=0.22  Score=40.54  Aligned_cols=34  Identities=18%  Similarity=0.139  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG  190 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~  190 (347)
                      -+|.+|+|.| .|.+|..+++.+...|++|++++.
T Consensus        34 L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          34 FGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            3678999999 599999999999999999998873

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=89.42  E-value=0.47  Score=37.83  Aligned_cols=98  Identities=13%  Similarity=0.077  Sum_probs=61.8

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCCCCc
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFPEGI  228 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~  228 (347)
                      ..+....+||=+|  +|.|..+..++++. +.++++++. ++-.+.+++   +.|....+..... ++.+    -.+.++
T Consensus        77 ~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~~----~~p~~~  148 (256)
T d1qzza2          77 YDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFFK----PLPVTA  148 (256)
T ss_dssp             SCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTTS----CCSCCE
T ss_pred             CCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-eccc----cccccc
Confidence            4566778899988  67899999999988 779999986 443444432   3343221221111 2111    112368


Q ss_pred             cEEEECCC-----c----hhHHHHHHhhccCCEEEEEcc
Q 019042          229 DIYFENVG-----G----KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       229 d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      |+++-..-     .    ..+..+.+.|+|+|+++++..
T Consensus       149 D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         149 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            88874322     1    146778889999999998865

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.41  E-value=0.22  Score=34.82  Aligned_cols=33  Identities=21%  Similarity=0.047  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      .++++|.|| |.+|+-.++.++.+|.+|+.+.++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            357999996 999999999999999999999754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.32  E-value=0.27  Score=34.47  Aligned_cols=34  Identities=9%  Similarity=0.006  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .++++|.|+ |.+|+-.++.++.+|.+|+.+.+++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            368999996 9999999999999999999999864

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.29  E-value=0.31  Score=38.91  Aligned_cols=34  Identities=21%  Similarity=0.161  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG  190 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~  190 (347)
                      -+|.+|+|+| .|.+|..+++.+...|++|++++.
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            4689999999 699999999999999999998864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.27  E-value=0.19  Score=41.41  Aligned_cols=38  Identities=18%  Similarity=0.128  Sum_probs=32.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .....++|+|+|| |..|+.++..++..|.+|+++..++
T Consensus        26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4445679999996 9999999999999999999998654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.10  E-value=0.28  Score=34.51  Aligned_cols=35  Identities=11%  Similarity=0.105  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      ..++++|.|+ |.+|+=.++..+.+|.+|+.+.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3579999996 9999999999999999999999764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=89.01  E-value=0.32  Score=38.28  Aligned_cols=34  Identities=21%  Similarity=0.107  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      .-.+|+|+|| |..|++++..++..|.+|+++.+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3458999996 999999999999999999999864

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.81  E-value=0.24  Score=41.29  Aligned_cols=92  Identities=25%  Similarity=0.152  Sum_probs=51.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HhCCCe---eEecCChhhHHHHHHHHCC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKN---KFGFDD---AFNYKKEPDLDAALKRCFP  225 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~  225 (347)
                      ....+|++||-.|+  |.|.+++.+| ..|+ +|+++..++. ...+++   ..+...   ++..+-. ++     .+..
T Consensus        34 ~~~~~~~~VLDlGc--GtG~ls~~aa-~~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGC--GTGILSMFAA-KHGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLE-DV-----HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEETC--TTSHHHHHHH-HTCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTT-TS-----CCSS
T ss_pred             cccCCcCEEEEeCC--CCCHHHHHHH-HhCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehh-hc-----cCcc
Confidence            34567899999984  3566665444 4676 8999998753 233331   334321   2222211 11     1112


Q ss_pred             CCccEEEECCCc------h----hHHHHHHhhccCCEEE
Q 019042          226 EGIDIYFENVGG------K----MLDAVLLNMRIHGRIA  254 (347)
Q Consensus       226 ~~~d~vid~~g~------~----~~~~~~~~l~~~G~~v  254 (347)
                      +.+|+|+...-.      .    .+...-++|+|+|+++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            379998763221      1    2344447899999885

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.66  E-value=0.1  Score=37.99  Aligned_cols=89  Identities=11%  Similarity=-0.003  Sum_probs=49.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV---GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~---G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|.|.||+|-+|+-.++++..+   ..++..+.++...-+.+.  +.... +....   .    ......++|++|-|.+
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~--~~~~~-~~~~~---~----~~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG--FAESS-LRVGD---V----DSFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE--ETTEE-EECEE---G----GGCCGGGCSEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee--ecccc-chhcc---c----hhhhhccceEEEecCC
Confidence            6899999999999999999754   347776665533211111  11111 11100   0    0000125899999998


Q ss_pred             chhHHH-HHHhhccCCEEEEEcc
Q 019042          237 GKMLDA-VLLNMRIHGRIAVCGM  258 (347)
Q Consensus       237 ~~~~~~-~~~~l~~~G~~v~~g~  258 (347)
                      ...... .-.....+.+++..+.
T Consensus        74 ~~~s~~~~~~~~~~g~~VID~Ss   96 (144)
T d2hjsa1          74 AEVSRAHAERARAAGCSVIDLSG   96 (144)
T ss_dssp             HHHHHHHHHHHHHTTCEEEETTC
T ss_pred             cchhhhhccccccCCceEEeech
Confidence            754444 4445555666665543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.58  E-value=0.2  Score=37.34  Aligned_cols=98  Identities=12%  Similarity=0.016  Sum_probs=60.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCCeeEe--cCChhhHHHHHHHHCCCCccE
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKN---KFGFDDAFN--YKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~--~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      -.|++++|.|-+.-+|.=.+.++...|+.|+........ .+.+.   ..-...+-+  .-..+.+.+...+     .|+
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~-----aDI  100 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ-KFTRGESLKLNKHHVEDLGEYSEDLLKKCSLD-----SDV  100 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE-EEESCCCSSCCCCEEEEEEECCHHHHHHHHHH-----CSE
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccc-ccccccceeeeeeccccccccchhHHhhcccc-----CCE
Confidence            468999999988899998888888899999866543211 00000   000111111  1112133334433     899


Q ss_pred             EEECCCchhHHHHHHhhccCCEEEEEccc
Q 019042          231 YFENVGGKMLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       231 vid~~g~~~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      ++-++|...+.---+.+++|..++.+|..
T Consensus       101 vIsavG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1         101 VITGVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             EEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             EEEccCCCccccChhhcccCceEeecccc
Confidence            99999976542233577888888988864

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=88.56  E-value=0.33  Score=40.91  Aligned_cols=73  Identities=10%  Similarity=0.094  Sum_probs=42.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCCH--HHHHHHHHHhC-CCe----eEecCChhhHHHHHHHHCCCCccEE
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCY-VVGSAGSK--EKVNLLKNKFG-FDD----AFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~-V~~~~~~~--~~~~~~~~~~g-~~~----vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      +|||+||+|-+|...+..+...|.+ |+++....  .+.+.+. .+. ...    ..|..+...+.+.++..   .+|+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---~~d~V   77 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DISESNRYNFEHADICDSAEITRIFEQY---QPDAV   77 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TTTTCTTEEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH-hhhhcCCcEEEEccCCCHHHHHHHHHhC---CCCEE
Confidence            6999999999999999988888986 45554321  1111122 221 111    12333332333333322   58999


Q ss_pred             EECCC
Q 019042          232 FENVG  236 (347)
Q Consensus       232 id~~g  236 (347)
                      |.+++
T Consensus        78 ihlAa   82 (361)
T d1kewa_          78 MHLAA   82 (361)
T ss_dssp             EECCS
T ss_pred             EECcc
Confidence            99986

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.53  E-value=1  Score=37.97  Aligned_cols=31  Identities=19%  Similarity=0.148  Sum_probs=25.6

Q ss_pred             CEEEEEcCCChHHHHHHH-HHHHCCCEEEEEe
Q 019042          159 EYVYVSAASGAVGQLVGQ-FAKLVGCYVVGSA  189 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~q-la~~~G~~V~~~~  189 (347)
                      =+|||+||+|-+|...+. |++..|.+|++++
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            369999999999977665 5567899999986

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=88.50  E-value=1.6  Score=32.30  Aligned_cols=99  Identities=11%  Similarity=0.049  Sum_probs=58.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC----CCEEEEEeC--CHHHHHHHHHHhCCC------ee--------EecCCh-hhHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV----GCYVVGSAG--SKEKVNLLKNKFGFD------DA--------FNYKKE-PDLDA  218 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~----G~~V~~~~~--~~~~~~~~~~~~g~~------~v--------i~~~~~-~~~~~  218 (347)
                      +|.|.| -|-+|.+....+-..    ..+|+++..  +.+.+.++. ++-..      .+        ++.+.- -.-.+
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~   80 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR   80 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence            588998 699999988776543    346766663  444455554 33110      00        110000 00001


Q ss_pred             HHHHHCCC--CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          219 ALKRCFPE--GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       219 ~i~~~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ...++.++  ++|+|+||+|. .....+..+|..+-+-|++..+.
T Consensus        81 ~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             CHHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            12233333  79999999997 57778888999887767676654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.39  E-value=1.5  Score=30.47  Aligned_cols=92  Identities=11%  Similarity=-0.038  Sum_probs=59.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCch-
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGGK-  238 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-  238 (347)
                      +++|.|. |.+|+.++..++  |.+|.++..++++.+.++ ..|.. ++..+.  .-.+.+++..-..++.++-+...+ 
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~-~i~Gd~--~~~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGAN-FVHGDP--TRVSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCE-EEESCT--TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCcc-cccccc--CCHHHHHHhhhhcCcEEEEeccchh
Confidence            5889995 999988777664  456778888888888887 77764 343332  223445554334688888888764 


Q ss_pred             ---hHHHHHHhhccCCEEEEEcc
Q 019042          239 ---MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       239 ---~~~~~~~~l~~~G~~v~~g~  258 (347)
                         ..-...+.+.+..+++....
T Consensus        75 ~n~~~~~~~r~~~~~~~iia~~~   97 (129)
T d2fy8a1          75 ETIHCILGIRKIDESVRIIAEAE   97 (129)
T ss_dssp             HHHHHHHHHHHHCSSSCEEEECS
T ss_pred             hhHHHHHHHHHHCCCceEEEEEc
Confidence               23344456667766665543

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.37  E-value=5.9  Score=32.74  Aligned_cols=52  Identities=25%  Similarity=0.291  Sum_probs=40.1

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCCe
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGFDD  206 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~  206 (347)
                      ..+++++.|+. ..+|..|.+++..|+.+|.+.+++..   ++++.+.++ .+|+.-
T Consensus        92 g~~~~~~~vv~-aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~v  146 (355)
T d1jbqa_          92 GTLKPGDTIIE-PTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAEI  146 (355)
T ss_dssp             TCSCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCEE
T ss_pred             CCcccCceEEE-ecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCeE
Confidence            45566666555 44799999999999999998776654   567888888 999853

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.99  E-value=0.58  Score=38.15  Aligned_cols=94  Identities=9%  Similarity=0.082  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC------C---eeEecCChhhHHHHHHHHCCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGF------D---DAFNYKKEPDLDAALKRCFPE  226 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~------~---~vi~~~~~~~~~~~i~~~~~~  226 (347)
                      ..++|||+|+  |-|..+-.+++..+. +|+++.-+++-.+.+++-+..      +   .++. .   |..+-+++ +++
T Consensus        89 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~-~---Da~~~l~~-~~~  161 (295)
T d1inla_          89 NPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-A---NGAEYVRK-FKN  161 (295)
T ss_dssp             SCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-S---CHHHHGGG-CSS
T ss_pred             CCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh-h---hHHHHHhc-CCC
Confidence            3479999995  556667788887754 899999998877777732211      1   2221 1   44444443 334


Q ss_pred             CccEEEE-CCC----c-------hhHHHHHHhhccCCEEEEEc
Q 019042          227 GIDIYFE-NVG----G-------KMLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       227 ~~d~vid-~~g----~-------~~~~~~~~~l~~~G~~v~~g  257 (347)
                      .+|+||- +..    .       +.+..+.++|+++|.++.-.
T Consensus       162 ~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         162 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            7999863 321    1       24678888999999998653

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=87.92  E-value=1.5  Score=33.89  Aligned_cols=91  Identities=13%  Similarity=0.194  Sum_probs=56.4

Q ss_pred             EEEEEcCCChHHH-HHHHHHHHC-CCEEEEEe-CCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          160 YVYVSAASGAVGQ-LVGQFAKLV-GCYVVGSA-GSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       160 ~vlI~ga~g~vG~-~a~qla~~~-G~~V~~~~-~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +|.|+| +|.+|. ..+...+.. ++++++++ +++++.+.+.++++..  .+..+++   +.+.+.   ...+|+|+-|
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d---~~ell~---~~~iD~V~I~  107 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN---FDKIAK---DPKIDAVYII  107 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS---GGGGGG---CTTCCEEEEC
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc---hhhhcc---cccceeeeec
Confidence            789999 498885 344444444 77877554 5667766665577763  2333432   222221   1269999988


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEEcc
Q 019042          235 VGG-KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       235 ~g~-~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.. .+...+..+++.+ .=|.+.-
T Consensus       108 tp~~~H~~~~~~al~~g-k~v~~EK  131 (221)
T d1h6da1         108 LPNSLHAEFAIRAFKAG-KHVMCEK  131 (221)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEECS
T ss_pred             cchhhhhhHHHHhhhcc-hhhhcCC
Confidence            877 4777788888765 4455654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=87.87  E-value=0.3  Score=40.40  Aligned_cols=35  Identities=20%  Similarity=0.216  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      +..+|+|+|| |..|+.++..++..|.+|+++..++
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3578999996 9999999999999999999999764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=87.80  E-value=0.47  Score=35.20  Aligned_cols=99  Identities=14%  Similarity=0.129  Sum_probs=60.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCC-----Ce-e------EecCCh-hh--HHHHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGF-----DD-A------FNYKKE-PD--LDAALK  221 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~-----~~-v------i~~~~~-~~--~~~~i~  221 (347)
                      +|.|.| -|-+|.++...+...+.+++++..   +.+.+.++. ++-.     .. +      +..+.. -.  -.....
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~   79 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE   79 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH
Confidence            588999 699999999988888888777754   335555555 3311     00 0      000000 00  000111


Q ss_pred             HHCCC--CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          222 RCFPE--GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       222 ~~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ++.++  ++|+|+||+|. .....+..+++.+-+-|++..+.
T Consensus        80 ~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          80 NIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             GCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             HCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            22222  69999999998 57778888888887667676654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=87.53  E-value=1  Score=35.45  Aligned_cols=32  Identities=16%  Similarity=0.157  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeC
Q 019042          158 GEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAG  190 (347)
Q Consensus       158 ~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~  190 (347)
                      +.+|+|.|+ |++|..+++.+...|. +++.++.
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            468999995 9999999999999999 7777764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.51  E-value=0.38  Score=33.46  Aligned_cols=36  Identities=11%  Similarity=0.018  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      +.+.+++|.|| |.+|+-+++.++..|.+|+.+.+++
T Consensus        30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            34578999996 9999999999999999999998764

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=87.41  E-value=0.91  Score=36.48  Aligned_cols=72  Identities=13%  Similarity=0.138  Sum_probs=42.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-EEEEEe--CCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCC-CCccEEEECCC
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGC-YVVGSA--GSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFP-EGIDIYFENVG  236 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~-~V~~~~--~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~-~~~d~vid~~g  236 (347)
                      |||+||+|-+|...+..+...|. +|+++.  +...+..... ++.....++..   ++...+..... ..++.++-+.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDKE---DFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEHH---HHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccch---HHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999888888897 688875  2222333333 33333333221   33333332222 25777776654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.30  E-value=1  Score=33.46  Aligned_cols=90  Identities=12%  Similarity=0.011  Sum_probs=51.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKN---KFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +|.|.||+|-+|+-.++++..+ .+++..+.++...-+.+.+   .+-....+...   +..+...     ++|++|-|.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~---~~~~~~~-----~~dvvf~a~   74 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEF---DPEKVSK-----NCDVLFTAL   74 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCC---CHHHHHH-----HCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccccccc---CHhHhcc-----ccceEEEcc
Confidence            6899999999999999999876 5577777655432222220   11111122222   2222222     289999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEcc
Q 019042          236 GGKMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       236 g~~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      +.......... ..+-+++..+.
T Consensus        75 p~~~s~~~~~~-~~~~~VIDlSa   96 (176)
T d1vkna1          75 PAGASYDLVRE-LKGVKIIDLGA   96 (176)
T ss_dssp             STTHHHHHHTT-CCSCEEEESSS
T ss_pred             ccHHHHHHHHh-hccceEEecCc
Confidence            87544443333 24556665543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.18  E-value=0.22  Score=40.44  Aligned_cols=33  Identities=27%  Similarity=0.256  Sum_probs=29.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      .|+|.|| |..|++++..++..|.+|+++.+.++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4899996 99999999999999999999987653

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=87.17  E-value=2.5  Score=31.06  Aligned_cols=98  Identities=12%  Similarity=0.082  Sum_probs=59.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeC---CHHHHHHHHHHhCCC------ee------EecCChhh----HHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAG---SKEKVNLLKNKFGFD------DA------FNYKKEPD----LDAA  219 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~---~~~~~~~~~~~~g~~------~v------i~~~~~~~----~~~~  219 (347)
                      +|.|.| -|-+|.++...+... ..+++++..   +.+.+.++. ++-..      .+      +..+.. .    -...
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~-~I~~~~~~~   79 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGN-PITIFQERD   79 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTE-EEEEECCSS
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCE-EEEEEECCC
Confidence            689999 699999999877655 468777754   345555555 33110      00      100000 0    0001


Q ss_pred             HHHHCCC--CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          220 LKRCFPE--GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       220 i~~~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ..++.++  ++|+|+||+|. .....+..++..+-+-|++..+.
T Consensus        80 p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          80 PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hhhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            2233333  79999999998 56677777888887666666554

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.88  E-value=0.32  Score=38.85  Aligned_cols=32  Identities=19%  Similarity=0.110  Sum_probs=28.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK  192 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~  192 (347)
                      .|+|+|| |..|++++.++++.|. +|.++.+++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            6999996 9999999999999997 888887654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=86.50  E-value=0.49  Score=34.23  Aligned_cols=90  Identities=21%  Similarity=0.118  Sum_probs=49.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC----CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV----GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENV  235 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~  235 (347)
                      +|.|.||+|-+|+-.++++...    ..++...+++...-...  .++-......... +. ..+     ..+|++|-|.
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~--~~~~~~~~~~~~~-~~-~~~-----~~~DvvF~al   72 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP--NFGKDAGMLHDAF-DI-ESL-----KQLDAVITCQ   72 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC--CSSSCCCBCEETT-CH-HHH-----TTCSEEEECS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc--ccCCcceeeeccc-ch-hhh-----ccccEEEEec
Confidence            5899999999999999865432    35666665443211111  1221111111111 11 111     2489999999


Q ss_pred             CchhHHHHHHhhccCC---EEEEEcc
Q 019042          236 GGKMLDAVLLNMRIHG---RIAVCGM  258 (347)
Q Consensus       236 g~~~~~~~~~~l~~~G---~~v~~g~  258 (347)
                      +...-......+...|   .++..+.
T Consensus        73 p~~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          73 GGSYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             CHHHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             CchHHHHHhHHHHHcCCceEEEeCCc
Confidence            9865555555544444   3665544

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.42  E-value=0.39  Score=39.50  Aligned_cols=35  Identities=20%  Similarity=0.149  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      ++..+|+|+|| |--|+.++..++..|.+|++...+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45568999996 999999999999999999999865

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=86.28  E-value=2.1  Score=30.94  Aligned_cols=38  Identities=21%  Similarity=0.183  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHH
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEK  194 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~  194 (347)
                      ++..+|.|+|+ |.+|...+.++...+. ++...+.++++
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            45678999996 9999988888887775 88888766543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=86.05  E-value=1.6  Score=31.37  Aligned_cols=38  Identities=21%  Similarity=0.127  Sum_probs=30.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLL  198 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~  198 (347)
                      +|.|+| .|.+|+..+.-++..|.+|++..+.+.+....
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            578888 59999999999999999998887665544333

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=85.96  E-value=0.21  Score=41.04  Aligned_cols=33  Identities=15%  Similarity=0.197  Sum_probs=28.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          159 EYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       159 ~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      ++|||+||+|-+|...+..+...|..|+++...
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            479999999999999999999999988877643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=85.69  E-value=0.64  Score=34.40  Aligned_cols=82  Identities=13%  Similarity=0.156  Sum_probs=54.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCCc-
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVGG-  237 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  237 (347)
                      +|.|+| +|.+|...+..++.. ++++++++....+      ......+..+.+   +...     ...+|+|+.|++. 
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~------~~~~~~~~~~~~---~~~~-----~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRAT------LDTKTPVFDVAD---VDKH-----ADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSC------CSSSSCEEEGGG---GGGT-----TTTCSEEEECSCTT
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccc------cccccccccchh---hhhh-----ccccceEEEeCCCc
Confidence            589999 599998888877765 6677766654332      111122232222   1111     1259999999987 


Q ss_pred             hhHHHHHHhhccCCEEEEE
Q 019042          238 KMLDAVLLNMRIHGRIAVC  256 (347)
Q Consensus       238 ~~~~~~~~~l~~~G~~v~~  256 (347)
                      .+...+..+|+.|-.++.+
T Consensus        70 ~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          70 TDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             THHHHHHHHHTTTSEEECC
T ss_pred             ccHHHHHHHHHCCCcEEEe
Confidence            5788899999999887754

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=85.65  E-value=5  Score=32.75  Aligned_cols=110  Identities=18%  Similarity=0.180  Sum_probs=65.7

Q ss_pred             HHHHhhhhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCCeeEecCChhh------
Q 019042          145 AYGGLYELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGFDDAFNYKKEPD------  215 (347)
Q Consensus       145 A~~~l~~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~vi~~~~~~~------  215 (347)
                      |++.+.....-.+..+|+... +|..|.+++..++..|.+++++..   +..+.+.++ .+|+.-++...+.++      
T Consensus        62 a~~~i~~~~~~~~~~~vv~as-sGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~~~  139 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITAS-AGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVR-GFGGEVLLHGANFDEAKAKAI  139 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEE-CSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHH-HHSCEEECCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecc-cchhHHHHHHhhccccccceeeccccchhHHHHHHH-hcCCEEEEcCcccccchhhhh
Confidence            444454333333444455544 689999999999999997776654   456778888 888853322111100      


Q ss_pred             -------------------------HHHHHHHHCCCCccEEEECCCch----hHHHHHHhhccCCEEEEEc
Q 019042          216 -------------------------LDAALKRCFPEGIDIYFENVGGK----MLDAVLLNMRIHGRIAVCG  257 (347)
Q Consensus       216 -------------------------~~~~i~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g  257 (347)
                                               ...++.+- .+.+|.+|-++|+.    .+...++.+.+.-+++.+.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                                     11111111 12589999988863    3445556667777887664

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.64  E-value=0.89  Score=32.87  Aligned_cols=47  Identities=17%  Similarity=0.099  Sum_probs=38.2

Q ss_pred             hhHHHHhhhhcCCCCCCEEEEE--cCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          143 LTAYGGLYELCSPKKGEYVYVS--AASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       143 ~tA~~~l~~~~~~~~~~~vlI~--ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      .|....+ . .+..+++.++|.  | .|-+|+-+++.+...|.+|+.+++.+
T Consensus        26 ~t~~d~l-~-~~~~~~~~vvi~d~g-gg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVM-D-GKKKIGKRVVILNAD-TYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             ECHHHHH-H-TCSCCCSEEEEEECC-CSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ECHHHHh-c-CccccCCceEEEecC-CChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4666666 2 466778888887  5 48899999999999999999999875

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=85.58  E-value=0.49  Score=34.86  Aligned_cols=35  Identities=23%  Similarity=0.247  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCCH
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVG--CYVVGSAGSK  192 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G--~~V~~~~~~~  192 (347)
                      .|++|+|.|| |.+|+.+++.++..+  .+|+++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3789999996 999999988888877  4888887654

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=85.46  E-value=5.2  Score=32.33  Aligned_cols=53  Identities=23%  Similarity=0.228  Sum_probs=38.8

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCCee
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGFDDA  207 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~v  207 (347)
                      ..+.++++|+... +|.-|++++..++..|.+.+++..   +..+...++ .+|+.-+
T Consensus        56 g~~~~~~~vv~~S-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~vv  111 (310)
T d1y7la1          56 GTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVNLV  111 (310)
T ss_dssp             TSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEEE
T ss_pred             CCCCCCceeeeec-CCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCceE
Confidence            4556777665555 799999999999999996555543   445777777 8888543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=85.19  E-value=2.1  Score=31.52  Aligned_cols=43  Identities=19%  Similarity=0.005  Sum_probs=36.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGF  204 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~  204 (347)
                      +|-|+| .|.+|...+.-+...|.+|++.++++++.+.+. +.+.
T Consensus         3 kIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~-~~~~   45 (178)
T d1pgja2           3 DVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFM-KANA   45 (178)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH-HHTT
T ss_pred             EEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HcCC
Confidence            377889 599999988888889999999999999988887 4443

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.10  E-value=0.4  Score=35.68  Aligned_cols=31  Identities=13%  Similarity=0.123  Sum_probs=27.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      -|+|+|+ |+.|+.++..+.+.|.+|.++.+.
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            3889996 999999999999999999999753

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.95  E-value=0.39  Score=37.82  Aligned_cols=31  Identities=23%  Similarity=0.153  Sum_probs=27.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      |+|+|| |..|++++..+...|.+|+++.+.+
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            789996 9999999998999999999998764

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.92  E-value=0.39  Score=38.10  Aligned_cols=32  Identities=22%  Similarity=0.182  Sum_probs=28.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHH
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKE  193 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~  193 (347)
                      |+|+|| |+.|++++..+...|.+|+++.+.+.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            889996 99999999999999999999998754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.89  E-value=1.4  Score=30.73  Aligned_cols=60  Identities=13%  Similarity=0.176  Sum_probs=46.3

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecC
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYK  211 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~  211 (347)
                      ..+++..-+.+++.-..-..-.+++++++..|. ++++.+++++..+.++ ++|++.++++.
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~  119 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPE  119 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHH
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHH
Confidence            446777777666643334566788889999988 7888898888888888 99999988754

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=84.82  E-value=2.9  Score=34.06  Aligned_cols=102  Identities=19%  Similarity=0.102  Sum_probs=59.8

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-eeEecCChhhHHHHHHHHC--CC
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKF---GFD-DAFNYKKEPDLDAALKRCF--PE  226 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~--~~  226 (347)
                      ....++.+||=..+  +.|..++.++ ..|++|+.++.++...+.+++.+   |.. .-+.+... |..+.+.+..  ++
T Consensus       128 ~~~~~~~rVLdlf~--~tG~~sl~aa-~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~-D~~~~l~~~~~~~~  203 (309)
T d2igta1         128 ETADRPLKVLNLFG--YTGVASLVAA-AAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICE-DAMKFIQREERRGS  203 (309)
T ss_dssp             HHSSSCCEEEEETC--TTCHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECS-CHHHHHHHHHHHTC
T ss_pred             hhccCCCeEEEecC--CCcHHHHHHH-hCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeC-CHHHhHHHHhhcCC
Confidence            35567888887763  3455555554 46899999999999888887533   332 11222222 4444444322  23


Q ss_pred             CccEEEEC---CC-----c-----h----hHHHHHHhhccCCEEEEEcc
Q 019042          227 GIDIYFEN---VG-----G-----K----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       227 ~~d~vid~---~g-----~-----~----~~~~~~~~l~~~G~~v~~g~  258 (347)
                      .||+||--   .+     .     .    .+..+..+++++|.++.+..
T Consensus       204 ~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~  252 (309)
T d2igta1         204 TYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA  252 (309)
T ss_dssp             CBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred             CCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEec
Confidence            79998742   11     0     1    23456678889987665543

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=84.73  E-value=5.3  Score=29.22  Aligned_cols=99  Identities=14%  Similarity=0.111  Sum_probs=56.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeC--CHHHHHHHHHHhCCC------ee------EecCCh---hhHHHHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAG--SKEKVNLLKNKFGFD------DA------FNYKKE---PDLDAALK  221 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~--~~~~~~~~~~~~g~~------~v------i~~~~~---~~~~~~i~  221 (347)
                      +|.|.| -|-+|.++...+... ..+++++-.  +.+.+.++- ++...      .+      +..+..   -.......
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll-~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~   80 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLL-KYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE   80 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhh-cccccCCcccccccccCCCEEeCCcceeeEecCCHH
Confidence            588999 699999888777654 457777753  333444444 32110      00      000000   00001122


Q ss_pred             HHCCC--CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          222 RCFPE--GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       222 ~~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ++.++  ++|+|+||+|. .....+..++..+-+-|++..+.
T Consensus        81 ~i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~  122 (171)
T d3cmco1          81 NLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA  122 (171)
T ss_dssp             GCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             HccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence            22333  79999999998 57777888888876555565543

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.42  E-value=0.22  Score=39.59  Aligned_cols=46  Identities=11%  Similarity=-0.156  Sum_probs=32.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Q 019042          154 SPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNK  201 (347)
Q Consensus       154 ~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~  201 (347)
                      ...+|++||=+|. | .|..+..+++..+.+|++++-++.-.+.+++.
T Consensus        48 ~~~~g~~vLDlGc-G-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~   93 (257)
T d2a14a1          48 GGLQGDTLIDIGS-G-PTIYQVLAACDSFQDITLSDFTDRNREELEKW   93 (257)
T ss_dssp             TSCCEEEEEESSC-T-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECC-C-CCHhHHHHhccccCcEEEecCCHHHHHHHHHH
Confidence            4567888888884 3 45555555554444899999999988888743

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=84.23  E-value=0.24  Score=37.49  Aligned_cols=34  Identities=18%  Similarity=0.173  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      ++..|+|+|+ |..|+.++..+.+.|.+|+++.+.
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            4567999996 999999999999999999999754

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=84.08  E-value=2.4  Score=31.08  Aligned_cols=98  Identities=14%  Similarity=0.163  Sum_probs=56.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC---CCEEEEEeC--CHHHHHHHHHHh----CC-Ce-e------EecCChhh----HHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV---GCYVVGSAG--SKEKVNLLKNKF----GF-DD-A------FNYKKEPD----LDA  218 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~---G~~V~~~~~--~~~~~~~~~~~~----g~-~~-v------i~~~~~~~----~~~  218 (347)
                      +|.|.| -|-+|.++...+...   ..+|+++-.  +.+.+.++. ++    |. .. +      +..+.. .    -.+
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLl-kyDS~hG~~~~~v~~~~~~l~ing~-~I~~~~~~   78 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL-KYDSVHKKFPGKVEYTENSLIVDGK-EIKVFAEP   78 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH-HCCTTTCCCSSCEEECSSEEEETTE-EEEEECCS
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHH-hccccccccCceEEEECCEEEECCE-EEEEEeCC
Confidence            688999 699999999877643   467777643  344455554 32    11 00 0      000000 0    000


Q ss_pred             HHHHHCCC--CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          219 ALKRCFPE--GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       219 ~i~~~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ...++.++  ++|+|+||+|. .....+..+++.+-+-|++..+.
T Consensus        79 ~p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          79 DPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             SGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             ChhhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            11112222  69999999998 57788888888876555565543

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.96  E-value=9.4  Score=30.87  Aligned_cols=105  Identities=17%  Similarity=0.145  Sum_probs=65.7

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCCeeEecCCh----------------
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKEKVNLLKNKFGFDDAFNYKKE----------------  213 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~vi~~~~~----------------  213 (347)
                      ..++.+...+|...+|..|++.+..++..|.+.+++..   +..+.+.++ .+|+.-++.....                
T Consensus        59 g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~  137 (320)
T d1z7wa1          59 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVELVLTDPAKGMKGAIAKAEEILAKT  137 (320)
T ss_dssp             TSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcceEEeeccccccccchhHHHHHHhC
Confidence            44555556666666899999999999999997666653   456788888 8998533211100                


Q ss_pred             ------------hh-------HHHHHHHHCCCCccEEEECCCch----hHHHHHHhhccCCEEEEEcc
Q 019042          214 ------------PD-------LDAALKRCFPEGIDIYFENVGGK----MLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       214 ------------~~-------~~~~i~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~  258 (347)
                                  .+       ...++.+-..+.+|.++-++|+.    .+...++...+.-+++.+..
T Consensus       138 ~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~  205 (320)
T d1z7wa1         138 PNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP  205 (320)
T ss_dssp             TTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             CCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence                        00       11122222334689999888863    23455556667777776543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.94  E-value=0.43  Score=35.49  Aligned_cols=32  Identities=16%  Similarity=0.018  Sum_probs=26.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe
Q 019042          157 KGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSA  189 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~  189 (347)
                      ++++|+|.|+ |.+|+-++..++..|.++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            5789999996 9999999999999998655543

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=83.73  E-value=0.38  Score=37.91  Aligned_cols=32  Identities=19%  Similarity=0.117  Sum_probs=27.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK  192 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~  192 (347)
                      +|+|+|| |..|+.++..++..|. +|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4899996 9999999999999997 699988653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.50  E-value=1.2  Score=34.79  Aligned_cols=34  Identities=29%  Similarity=0.353  Sum_probs=28.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHH-HHCCCEEEEEeC
Q 019042          156 KKGEYVYVSAASGAVGQLVGQFA-KLVGCYVVGSAG  190 (347)
Q Consensus       156 ~~~~~vlI~ga~g~vG~~a~qla-~~~G~~V~~~~~  190 (347)
                      -+|.+|+|+| .|.+|..+++.+ +..|++|++++.
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            4689999999 699999999887 567999988773

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.26  E-value=0.46  Score=36.51  Aligned_cols=30  Identities=17%  Similarity=0.126  Sum_probs=27.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      |+|+|+ |+.|+.++..+...|.+|+++...
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            788896 999999999999999999999864

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=83.22  E-value=6.2  Score=28.27  Aligned_cols=137  Identities=10%  Similarity=0.060  Sum_probs=73.3

Q ss_pred             EEEEEcCCChHHHH-HHHHHHHC-CCEEEEEe-CCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          160 YVYVSAASGAVGQL-VGQFAKLV-GCYVVGSA-GSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       160 ~vlI~ga~g~vG~~-a~qla~~~-G~~V~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      +|.|+| +|.+|.- .+..++.. ++++++++ ++.++.+.+.+.++...   ++   ++.+.+     ..+|+|+-|+.
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~---~~~~l~-----~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---AD---SLSSLA-----ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CS---SHHHHH-----TTCSEEEECSC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cc---cchhhh-----hhccccccccc
Confidence            588999 5999864 56666655 77877666 44455444444777642   22   222222     24899988887


Q ss_pred             c-hhHHHHHHhhccCCEEEEEcccccccCCCCccccchHHHH-hccceeeeeEecccccchHHHHHHHHHHHHcCCcccc
Q 019042          237 G-KMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMQVV-GKRIRMEGFLAGDFYHQYPKFLELVMPAIKEGKLVYV  314 (347)
Q Consensus       237 ~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  314 (347)
                      . .+...+..+++.+=. |.+.-+-..+.   .....+.... .++..+.-.....   .++...+.+.+++.+|.+...
T Consensus        71 ~~~h~~~~~~al~~gk~-V~~EKPla~~~---~e~~~l~~~a~~~~~~~~v~~~~r---~~~~~~~~~~~~i~~g~ig~~  143 (164)
T d1tlta1          71 TASHFDVVSTLLNAGVH-VCVDKPLAENL---RDAERLVELAARKKLTLMVGFNRR---FFVGCARHFIECVQNQTVPQT  143 (164)
T ss_dssp             TTHHHHHHHHHHHTTCE-EEEESSSCSSH---HHHHHHHHHHHHTTCCEEEECGGG---GHHHHHHHHHHHHHHTCCCTT
T ss_pred             chhccccccccccccce-eeccccccCCH---HHHHHHHHHHHHcCCcEEEEeccc---cCHHHHHHHHHHHHCCCCCCE
Confidence            6 477777778877655 45544321110   0011111121 2233222111111   123444567788888887654


Q ss_pred             c
Q 019042          315 E  315 (347)
Q Consensus       315 ~  315 (347)
                      +
T Consensus       144 ~  144 (164)
T d1tlta1         144 A  144 (164)
T ss_dssp             S
T ss_pred             E
Confidence            4

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=82.96  E-value=1.6  Score=33.79  Aligned_cols=66  Identities=17%  Similarity=0.195  Sum_probs=42.0

Q ss_pred             cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEECCC
Q 019042          165 AASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFENVG  236 (347)
Q Consensus       165 ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~~g  236 (347)
                      ..+|-+|.+.++-|..+|++|+.+......    . ......++......+..+.+.+... ..|++|.++.
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----~-~p~~~~~~~~~t~~~m~~~~~~~~~-~~D~~i~aAA   94 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVSL----P-TPPFVKRVDVMTALEMEAAVNASVQ-QQNIFIGCAA   94 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCCC----C-CCTTEEEEECCSHHHHHHHHHHHGG-GCSEEEECCB
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhccccc----C-cccccccceehhhHHHHHHHHhhhc-cceeEeeeec
Confidence            357789999999999999999999865321    0 1111234444443356666655443 4788877665

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=82.62  E-value=7.4  Score=28.69  Aligned_cols=102  Identities=21%  Similarity=0.238  Sum_probs=65.4

Q ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCC--eeEecCChhhHHHHHHHHCCCCccE
Q 019042          153 CSPKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFD--DAFNYKKEPDLDAALKRCFPEGIDI  230 (347)
Q Consensus       153 ~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~  230 (347)
                      ..+++|.+ +|-+..|+=|+ ...+++. +.+|+++++.++....++ ..-..  ..+..+-. ++.+.+.....+.+|.
T Consensus        14 l~~~~g~~-~vD~T~G~GGh-s~~iL~~-~~~viaiD~D~~ai~~a~-~~~~~~~~~~~~~f~-~~~~~l~~~~~~~vdg   88 (182)
T d1wg8a2          14 LAVRPGGV-YVDATLGGAGH-ARGILER-GGRVIGLDQDPEAVARAK-GLHLPGLTVVQGNFR-HLKRHLAALGVERVDG   88 (182)
T ss_dssp             HTCCTTCE-EEETTCTTSHH-HHHHHHT-TCEEEEEESCHHHHHHHH-HTCCTTEEEEESCGG-GHHHHHHHTTCSCEEE
T ss_pred             cCCCCCCE-EEEeCCCCcHH-HHHHhcc-cCcEEEEhhhhhHHHHHh-hccccceeEeehHHH-HHHHHHHHcCCCccCE
Confidence            46778875 56665555555 4455554 569999999999888887 44322  23433333 6666665544347887


Q ss_pred             EEECCCch----------------hHHHHHHhhccCCEEEEEccc
Q 019042          231 YFENVGGK----------------MLDAVLLNMRIHGRIAVCGMI  259 (347)
Q Consensus       231 vid~~g~~----------------~~~~~~~~l~~~G~~v~~g~~  259 (347)
                      |+=-.|-+                .+..+++.++++|+++.+...
T Consensus        89 Il~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fh  133 (182)
T d1wg8a2          89 ILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFH  133 (182)
T ss_dssp             EEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred             EEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecc
Confidence            76444421                367788889999998877653

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.59  E-value=0.39  Score=38.63  Aligned_cols=31  Identities=26%  Similarity=0.186  Sum_probs=28.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      +|+|+|| |..|+.++..++..|.+|+++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            4899996 999999999999999999999865

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=82.43  E-value=6.6  Score=29.42  Aligned_cols=72  Identities=18%  Similarity=0.157  Sum_probs=45.9

Q ss_pred             hhcCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCcc
Q 019042          151 ELCSPKKGEYVYVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGID  229 (347)
Q Consensus       151 ~~~~~~~~~~vlI~ga~g~vG~~a~qla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d  229 (347)
                      ...++ .|++||=.|+ | .|.+++. +...|+ +|++++.+++..+.+++......+++.    |+    .+ .++.+|
T Consensus        43 ~~~dl-~Gk~VLDlGc-G-tG~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~----D~----~~-l~~~fD  109 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAGT-G-NGILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA----DV----SE-ISGKYD  109 (197)
T ss_dssp             HHTSS-BTSEEEEETC-T-TCHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC----CG----GG-CCCCEE
T ss_pred             HcCCC-CCCEEEEeCC-C-CcHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE----eh----hh-cCCcce
Confidence            33454 5899999985 3 4655554 444665 899999999988888854443333332    22    11 234799


Q ss_pred             EEEECC
Q 019042          230 IYFENV  235 (347)
Q Consensus       230 ~vid~~  235 (347)
                      +||...
T Consensus       110 ~Vi~NP  115 (197)
T d1ne2a_         110 TWIMNP  115 (197)
T ss_dssp             EEEECC
T ss_pred             EEEeCc
Confidence            998653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.23  E-value=0.58  Score=36.30  Aligned_cols=31  Identities=16%  Similarity=0.158  Sum_probs=27.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCH
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGSK  192 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~  192 (347)
                      |+|+|+ |-.|+.++..+...|.+|.++.+.+
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788895 9999999999999999999999764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.20  E-value=1.4  Score=33.40  Aligned_cols=39  Identities=23%  Similarity=0.325  Sum_probs=34.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLK  199 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~  199 (347)
                      +|.|+| .|-+|+..+.++...|.+|++.+.++++.+.+.
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            588998 599999999999899999999999998888775

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=82.02  E-value=2.8  Score=30.59  Aligned_cols=99  Identities=14%  Similarity=0.116  Sum_probs=57.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCC--HHHHHHHHHHh----CC--Cee------EecCChhh----HHHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLVG-CYVVGSAGS--KEKVNLLKNKF----GF--DDA------FNYKKEPD----LDAAL  220 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~G-~~V~~~~~~--~~~~~~~~~~~----g~--~~v------i~~~~~~~----~~~~i  220 (347)
                      +|.|.| -|-+|.++...+.... .++.++...  .+.+.++. ++    |.  ..+      +..+.. .    -.+..
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~-~I~i~~~~~p   79 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGK-KIRVTAERDP   79 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTE-EEEEECCSSG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCE-EEEEEeCCCh
Confidence            578998 6999999999887764 577777643  23344443 22    11  001      000000 0    00011


Q ss_pred             HHHCCC--CccEEEECCCc-hhHHHHHHhhccCCEEEEEccccc
Q 019042          221 KRCFPE--GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMISQ  261 (347)
Q Consensus       221 ~~~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  261 (347)
                      .++.++  ++|+|+||+|. .....+..+++.+-+-|++..+..
T Consensus        80 ~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~  123 (166)
T d1gado1          80 ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSK  123 (166)
T ss_dssp             GGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             HHCCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeecccc
Confidence            122222  69999999998 577778888888866666665543

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.22  E-value=3.6  Score=30.03  Aligned_cols=98  Identities=12%  Similarity=0.061  Sum_probs=58.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCEEEEEeC---CHHHHHHHHHHhCCC------ee------EecCChhh----HHHH
Q 019042          160 YVYVSAASGAVGQLVGQFAKLV-GCYVVGSAG---SKEKVNLLKNKFGFD------DA------FNYKKEPD----LDAA  219 (347)
Q Consensus       160 ~vlI~ga~g~vG~~a~qla~~~-G~~V~~~~~---~~~~~~~~~~~~g~~------~v------i~~~~~~~----~~~~  219 (347)
                      +|.|.| -|-+|.++...+... ..+|.++-.   +.+.+.++- ++-..      .+      +..+.. .    ..+.
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~-~I~i~~~~~   78 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEK-KVSVFAEKD   78 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSC-EEEEECCSS
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhh-hcccccccceeeeccCCceEEecCc-EEEEEeCCC
Confidence            588998 699999999888765 557777753   345566665 43210      00      000000 0    0001


Q ss_pred             HHHHCCC--CccEEEECCCc-hhHHHHHHhhccCCEEEEEcccc
Q 019042          220 LKRCFPE--GIDIYFENVGG-KMLDAVLLNMRIHGRIAVCGMIS  260 (347)
Q Consensus       220 i~~~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  260 (347)
                      ..++.++  ++|+|+||+|. .....+..++..+-+-|++..+.
T Consensus        79 p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          79 PSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             GGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             hHHccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence            1111122  69999999998 56677888888886566665544

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.96  E-value=0.76  Score=35.17  Aligned_cols=30  Identities=13%  Similarity=-0.023  Sum_probs=27.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCEEEEEeCC
Q 019042          161 VYVSAASGAVGQLVGQFAKLVGCYVVGSAGS  191 (347)
Q Consensus       161 vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~  191 (347)
                      |+|+|+ |+.|+.++..|+..|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789996 999999999999999999999864

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=80.54  E-value=1.5  Score=33.17  Aligned_cols=89  Identities=13%  Similarity=0.083  Sum_probs=57.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEEEEC
Q 019042          155 PKKGEYVYVSAASGAVGQLVGQFAKLVGCYVVGSAGSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIYFEN  234 (347)
Q Consensus       155 ~~~~~~vlI~ga~g~vG~~a~qla~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~vid~  234 (347)
                      +.++++||=+|+  |.|..+..+     .++++++.+++-.+.++ +.+.. .+..+.. ++.     ..++.+|+|+..
T Consensus        34 ~~~~~~vLDiGc--G~G~~~~~~-----~~~~giD~s~~~~~~a~-~~~~~-~~~~d~~-~l~-----~~~~~fD~I~~~   98 (208)
T d1vlma_          34 LLPEGRGVEIGV--GTGRFAVPL-----KIKIGVEPSERMAEIAR-KRGVF-VLKGTAE-NLP-----LKDESFDFALMV   98 (208)
T ss_dssp             HCCSSCEEEETC--TTSTTHHHH-----TCCEEEESCHHHHHHHH-HTTCE-EEECBTT-BCC-----SCTTCEEEEEEE
T ss_pred             hCCCCeEEEECC--CCccccccc-----ceEEEEeCChhhccccc-ccccc-ccccccc-ccc-----cccccccccccc
Confidence            355678999985  356555544     35789999999888888 55543 2332221 210     112369999865


Q ss_pred             CC-----c--hhHHHHHHhhccCCEEEEEcc
Q 019042          235 VG-----G--KMLDAVLLNMRIHGRIAVCGM  258 (347)
Q Consensus       235 ~g-----~--~~~~~~~~~l~~~G~~v~~g~  258 (347)
                      ..     .  ..+....+.|+++|.+++...
T Consensus        99 ~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          99 TTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             SCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccchhhhhhcCCCCceEEEEec
Confidence            43     1  267888999999999887643

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=80.35  E-value=8.5  Score=27.90  Aligned_cols=73  Identities=14%  Similarity=0.134  Sum_probs=41.6

Q ss_pred             CCCEEEEEcCCChHHH--HHHHHHHHC-C---CEEEEEeCCHHHHHHHHH-------HhCCCeeEecCChhhHHHHHHHH
Q 019042          157 KGEYVYVSAASGAVGQ--LVGQFAKLV-G---CYVVGSAGSKEKVNLLKN-------KFGFDDAFNYKKEPDLDAALKRC  223 (347)
Q Consensus       157 ~~~~vlI~ga~g~vG~--~a~qla~~~-G---~~V~~~~~~~~~~~~~~~-------~~g~~~vi~~~~~~~~~~~i~~~  223 (347)
                      +.-+|.|.|| |++|.  +...+++.. .   .+++..+.++++++...+       ..+....+....  |..+.++  
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~eal~--   76 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DPEEAFT--   76 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CHHHHHS--
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--ChhhccC--
Confidence            3457899997 65552  333444433 2   379999988887652211       234332222222  4444443  


Q ss_pred             CCCCccEEEECCCc
Q 019042          224 FPEGIDIYFENVGG  237 (347)
Q Consensus       224 ~~~~~d~vid~~g~  237 (347)
                         +.|+|+.++|-
T Consensus        77 ---~AD~Vvitag~   87 (167)
T d1u8xx1          77 ---DVDFVMAHIRV   87 (167)
T ss_dssp             ---SCSEEEECCCT
T ss_pred             ---CCCEEEECCCc
Confidence               59999999974

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=80.21  E-value=11  Score=28.95  Aligned_cols=94  Identities=11%  Similarity=-0.008  Sum_probs=57.4

Q ss_pred             CEEEEEcCCCh----HHHHHHHHHHHC--CCEEEEEe-CCHHHHHHHHHHhCCCeeEecCChhhHHHHHHHHCCCCccEE
Q 019042          159 EYVYVSAASGA----VGQLVGQFAKLV--GCYVVGSA-GSKEKVNLLKNKFGFDDAFNYKKEPDLDAALKRCFPEGIDIY  231 (347)
Q Consensus       159 ~~vlI~ga~g~----vG~~a~qla~~~--G~~V~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  231 (347)
                      =+|.|+|. |.    ++..-+...+..  ++++++++ ++.++.+.+.++++....-.|+   ++.+.+..   ..+|+|
T Consensus        17 irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~---~~iD~V   89 (237)
T d2nvwa1          17 IRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD---SLESFAQY---KDIDMI   89 (237)
T ss_dssp             EEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES---CHHHHHHC---TTCSEE
T ss_pred             eEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec---chhhcccc---ccccee
Confidence            37899996 54    344444444443  57888655 5555655554478765443344   34444332   369999


Q ss_pred             EECCCc-hhHHHHHHhhccC-----CEEEEEccc
Q 019042          232 FENVGG-KMLDAVLLNMRIH-----GRIAVCGMI  259 (347)
Q Consensus       232 id~~g~-~~~~~~~~~l~~~-----G~~v~~g~~  259 (347)
                      +-|+.. .+...+..+|+.|     +.-|.+.-+
T Consensus        90 ~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKP  123 (237)
T d2nvwa1          90 VVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA  123 (237)
T ss_dssp             EECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred             eccCCCcchhhHHHHHHHhcccccCCceEEEecc
Confidence            999987 4677777777755     455667654