RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 019047
(347 letters)
>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 320
Score = 204 bits (520), Expect = 2e-64
Identities = 164/262 (62%), Positives = 213/262 (81%), Gaps = 10/262 (3%)
Query: 94 IAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDIT 153
IA+DVT+LIG TP+VYLN V EGCVG VAAKLE MEPC SVKDRIG+SMI+DAE+ G I
Sbjct: 3 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 62
Query: 154 PGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKG 213
PG++VL+EPT+GNTG+G+AF AA KGYKLI+TMPAS + ERRI+L AFG E++LTDP KG
Sbjct: 63 PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 122
Query: 214 LRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGG 273
++GA+ KAEEI+ TPN YM QQF+N AN KIH+++TGPEIW+ T G +D FV+ IGTGG
Sbjct: 123 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 182
Query: 274 TITGTGRFLKMMNKEIKVVGVEPAERSVISGEN----------AGYVPSILDVQLLDEVI 323
TITG G++LK N +K+ GVEP E +++SG AG++PS+L+V L+DEV+
Sbjct: 183 TITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVV 242
Query: 324 KVTNDEAVNMARRLALEEGLLV 345
+V++DE+++MAR+LAL+EGLLV
Sbjct: 243 QVSSDESIDMARQLALKEGLLV 264
>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermotoga maritima [TaxId: 2336]}
Length = 293
Score = 183 bits (465), Expect = 2e-56
Identities = 115/261 (44%), Positives = 161/261 (61%), Gaps = 19/261 (7%)
Query: 96 EDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPG 155
+ +LIG TP+V L+ + + KLE P SVKDR MI DAE+ G + G
Sbjct: 2 HMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG 57
Query: 156 KTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLR 215
+VEPT+GN G+ IA + A +G+++I+TMP + ++ERR +L+ GAE++LT E G++
Sbjct: 58 ---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMK 114
Query: 216 GALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTI 275
GA++KA EI A+M QF+N N+ H +TGPEI + +D FVA +GTGGTI
Sbjct: 115 GAVEKALEIS-RETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTI 173
Query: 276 TGTGRFLK-MMNKEIKVVGVEPAERSVISGEN----------AGYVPSILDVQLLDEVIK 324
+G GR LK +K+V VEPA+ V+SG AG+VP ILD ++DEVI
Sbjct: 174 SGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEVIT 233
Query: 325 VTNDEAVNMARRLALEEGLLV 345
V ++EA MAR LA +EGLLV
Sbjct: 234 VEDEEAYEMARYLAKKEGLLV 254
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 355
Score = 176 bits (446), Expect = 8e-53
Identities = 98/272 (36%), Positives = 146/272 (53%), Gaps = 21/272 (7%)
Query: 94 IAEDVTQLIGRTPMVYLNKVTE--GCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGD 151
I D+ + IG TPMV +NK+ + G + AK E SVKDRI MI DAE G
Sbjct: 34 ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGT 93
Query: 152 ITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPE 211
+ PG T+ +EPT+GNTG+G+A AAV+GY+ I+ MP + E+ +LRA GAEI+ T
Sbjct: 94 LKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTN 152
Query: 212 KGLRGALDKA---EEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAA 268
+ PN+++ Q+ N +N H+D+T EI + G +D+ VA+
Sbjct: 153 ARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVAS 212
Query: 269 IGTGGTITGTGRFLKMMNKEIKVVGVEPAERSV---------------ISGENAGYVPSI 313
+GTGGTITG R LK +++GV+P + + G ++P++
Sbjct: 213 VGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTV 272
Query: 314 LDVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
LD ++D+ K ++EA AR L +EGLL
Sbjct: 273 LDRTVVDKWFKSNDEEAFTFARMLIAQEGLLC 304
>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine
synthase) {Salmonella typhimurium [TaxId: 90371]}
Length = 302
Score = 171 bits (434), Expect = 8e-52
Identities = 126/271 (46%), Positives = 177/271 (65%), Gaps = 23/271 (8%)
Query: 94 IAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDIT 153
I ED + IG TP+V LN++ G + AK+ES P SVK RIG +MI DAE+ G +
Sbjct: 3 IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 59
Query: 154 PGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKG 213
PG + VEPT GNTG+ +A+VAA +GYKL +TMP + ++ERR LL+A GA ++LT+ KG
Sbjct: 60 PGVEL-VEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118
Query: 214 LRGALDKAEEIVLNT-PNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTG 272
++GA+ KAEEIV + + QQF N AN +IH +TGPEIWEDT G VD+F++ +GTG
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178
Query: 273 GTITGTGRFLKM--MNKEIKVVGVEPAERSV----------------ISGENAGYVPSIL 314
GT+TG R++K ++ V VEP + V I G AG++P L
Sbjct: 179 GTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNL 238
Query: 315 DVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
D++L+D+V+ +TN+EA++ ARRL EEG+L
Sbjct: 239 DLKLIDKVVGITNEEAISTARRLMEEEGILA 269
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine
synthase) {Haemophilus influenzae [TaxId: 727]}
Length = 310
Score = 170 bits (430), Expect = 4e-51
Identities = 119/270 (44%), Positives = 164/270 (60%), Gaps = 21/270 (7%)
Query: 94 IAEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDIT 153
I D + IG TP+V L NV K+E P SVK RIG +M+ AE+ G +T
Sbjct: 2 IYADNSYSIGNTPLVRLKHFGHNG--NVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLT 59
Query: 154 PGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKG 213
GK + V+ T+GNTG+ +A+VAA +GYK+ +TMP + +LER+ LL G ++LT+ KG
Sbjct: 60 KGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKG 118
Query: 214 LRGALDKAEEIVL-NTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTG 272
++GA+ KAEEIV + M +QF+N AN +IH ++TGPEIW+DT G VD+ VA +GTG
Sbjct: 119 MKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTG 178
Query: 273 GTITGTGRFLK-MMNKEIKVVGVEPAERSVIS----------------GENAGYVPSILD 315
G+ITG R +K K+I V VEP E VIS G AG++P LD
Sbjct: 179 GSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLD 238
Query: 316 VQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
+ ++D V V +D A+ ARRL EEG+L
Sbjct: 239 LSIIDRVETVDSDTALATARRLMAEEGILA 268
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermus thermophilus [TaxId: 274]}
Length = 302
Score = 169 bits (428), Expect = 7e-51
Identities = 122/259 (47%), Positives = 170/259 (65%), Gaps = 12/259 (4%)
Query: 98 VTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGK- 156
V IG+TP+V L KV E + V KLE + P S+KDR + MI DAEE G + PG
Sbjct: 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSG 62
Query: 157 TVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRG 216
V+VEPT+GNTG+G+A +AA +GY+LI+TMPA + ER+ +L+AFGAE++LTDPE+ +
Sbjct: 63 QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLA 122
Query: 217 ALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTIT 276
A ++A + A+M QF N AN++ H+++TGPE++E G +D FV GTGGTIT
Sbjct: 123 AREEALRLK-EELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181
Query: 277 GTGRFLKMMNKEIKVVGVEPAERSVIS----------GENAGYVPSILDVQLLDEVIKVT 326
G GR+LK +KV+ VEPA +V+S G G++P LD+ LLD VI+V
Sbjct: 182 GVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVW 241
Query: 327 NDEAVNMARRLALEEGLLV 345
++A +ARRLA EEGL +
Sbjct: 242 EEDAFPLARRLAREEGLFL 260
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine
synthase) {Escherichia coli, isoform B (CysM) [TaxId:
562]}
Length = 292
Score = 166 bits (421), Expect = 7e-50
Identities = 104/251 (41%), Positives = 153/251 (60%), Gaps = 5/251 (1%)
Query: 98 VTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKT 157
+ Q IG TP+V L ++ V KLE P SVKDR SMI +AE+ G+I PG
Sbjct: 3 LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDV 62
Query: 158 VLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGA 217
+ +E T+GNTG+ +A +AA+KGY++ + MP + + ERR +RA+GAE+IL E+G+ GA
Sbjct: 63 L-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 121
Query: 218 LDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITG 277
D A E+ N + QF+N N H+ +TGPEIW+ T G + FV+++GT GTITG
Sbjct: 122 RDLALEMA-NRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 180
Query: 278 TGRFLKMMNKEIKVVGVEPAERSVISG---ENAGYVPSILDVQLLDEVIKVTNDEAVNMA 334
RF++ +K + +VG++P E S I G Y+P I + L+DEV+ + +A N
Sbjct: 181 VSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPTEYLPGIFNASLVDEVLDIHQRDAENTM 240
Query: 335 RRLALEEGLLV 345
R LA+ EG+
Sbjct: 241 RELAVREGIFC 251
>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine
synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 382
Score = 146 bits (370), Expect = 2e-41
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 20/267 (7%)
Query: 91 GVNIAEDVTQLIGR---TPMVYLNKVTE-GCVGNVAAKLESMEPC-RSVKDRIGYSMITD 145
G + R TP+V G V KLE P SVKDR +I+
Sbjct: 79 GEMVFPSPLDFFERGKPTPLVRSRLQLPNGV--RVWLKLEWYNPFSLSVKDRPAVEIISR 136
Query: 146 AEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEI 205
+ G V + T+ N G+ ++ VA + GY+ V +P + ++L R GA++
Sbjct: 137 LSR--RVEKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQV 193
Query: 206 ILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLG---CV 262
I+ L + + QF N AN + H T EI+ + +
Sbjct: 194 IVDPEAPSTVHLLPRVMKDS-KNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLAL 252
Query: 263 DIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISG----ENAGYVPSILDVQL 318
++GT G ++ +L+ ++ I+ V V+PA+ I G E ++LD+
Sbjct: 253 RGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDI-- 310
Query: 319 LDEVIKVTNDEAVNMARRLALEEGLLV 345
+ +VT +EA+ +A +GL++
Sbjct: 311 SYTLAEVTLEEAMEAVVEVARSDGLVI 337
>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14
(SPCC320.14, SPCC330.15c) {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 318
Score = 119 bits (298), Expect = 9e-32
Identities = 47/273 (17%), Positives = 107/273 (39%), Gaps = 31/273 (11%)
Query: 95 AEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITP 154
+E + + +TP++ + V + V V K E+ + + K R + ++
Sbjct: 12 SERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLN----EAQ 67
Query: 155 GKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGL 214
K ++ ++GN IA A + G + MP + + +G ++I+ D K
Sbjct: 68 RKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDD 127
Query: 215 RGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGT 274
R A+EI + +D+ ++ + E++E+ +G +D +G GG
Sbjct: 128 RE--KMAKEIS-EREGLTIIPPYDHP-HVLAGQGTAAKELFEE-VGPLDALFVCLGGGGL 182
Query: 275 ITGTGRFLKMMNKEIKVVGVEPAER----------------------SVISGENAGYVPS 312
++G+ + +V GVEP ++ G
Sbjct: 183 LSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTF 242
Query: 313 ILDVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
+ + +D+++ V+++E ++ + A ++V
Sbjct: 243 SIIKEKVDDILTVSDEELIDCLKFYAARMKIVV 275
>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli
[TaxId: 562]}
Length = 331
Score = 117 bits (294), Expect = 5e-31
Identities = 53/270 (19%), Positives = 93/270 (34%), Gaps = 31/270 (11%)
Query: 98 VTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKT 157
V + TP+ + K++ + K E +P S K R Y+M+ E
Sbjct: 21 VYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQ----KAH 76
Query: 158 VLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGA 217
++ + GN G+AF +A G K ++ MP +T + +R FG E++L
Sbjct: 77 GVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEA-- 134
Query: 218 LDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITG 277
+ FD+ I T +D +G GG G
Sbjct: 135 -KAKAIELSQQQGFTWVPPFDHPMV--IAGQGTLALELLQQDAHLDRVFVPVGGGGLAAG 191
Query: 278 TGRFLKMMNKEIKVVGVEPAE-----RSVISGE-----------------NAGYVPSILD 315
+K + +IKV+ VE + ++ +G G L
Sbjct: 192 VAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLC 251
Query: 316 VQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
+ LD++I V +D + L + +
Sbjct: 252 QEYLDDIITVDSDAICAAMKDLFEDVRAVA 281
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus
thermophilus [TaxId: 274]}
Length = 310
Score = 103 bits (256), Expect = 9e-26
Identities = 48/276 (17%), Positives = 94/276 (34%), Gaps = 35/276 (12%)
Query: 95 AEDVTQLIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITP 154
+ RTP++ + + K E ++ S K R S E
Sbjct: 10 FRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE------- 62
Query: 155 GKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGL 214
L+ ++GN G+A+ A V G K +V MP + ++ RA+GAE++
Sbjct: 63 NPKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVTAKN 122
Query: 215 RGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWE--DTLGCVDIFVAAIGTG 272
R + +A + + FD+ + + + + +A +G G
Sbjct: 123 REEVARALQ---EETGYALIHPFDDPLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGG 179
Query: 273 GTITGTGRFLKMMNKEIKVVGVEPAERSV-----------------------ISGENAGY 309
G + G +K ++ V+GVEP + + G
Sbjct: 180 GLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLSLGE 239
Query: 310 VPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
+ + +D ++ V+ + + R L +V
Sbjct: 240 RTFPILRERVDGILTVSEEALLEAERLLFTRTKQVV 275
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Pseudomonas sp., strain ACP [TaxId: 306]}
Length = 338
Score = 103 bits (256), Expect = 1e-25
Identities = 48/285 (16%), Positives = 83/285 (29%), Gaps = 40/285 (14%)
Query: 98 VTQLIGRTPMVYLNKVTE--GCVGNVAAKLESMEPCRSV---KDRIGYSMITDAEESGDI 152
G TP+ L ++++ G ++ AK E + K R +I +A G
Sbjct: 9 YPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCD 68
Query: 153 TPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILT---- 208
T V + N +A VAA G K ++ N + R ++
Sbjct: 69 TL---VSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGAD 125
Query: 209 ------DPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTL--- 259
+ G R + + A E V + G
Sbjct: 126 VRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAE 185
Query: 260 --GCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPS----- 312
D V TG T G + +V+GV+ + + + E +
Sbjct: 186 LGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQITRIARQTAEK 245
Query: 313 ------------ILDVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
+LD + + N+ + R A EG+L
Sbjct: 246 VGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLT 290
>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 325
Score = 94.8 bits (234), Expect = 9e-23
Identities = 46/267 (17%), Positives = 79/267 (29%), Gaps = 22/267 (8%)
Query: 98 VTQLIGRTPMVYLNKVTEGCVGNVAAKLESM--EPCRSVKDRIGYSMITDAEESGDITPG 155
V + TP+ YL ++ +V K + + K R ++ DA G
Sbjct: 15 VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVV- 73
Query: 156 KTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLR 215
+ V N A G I+ + L+ LL K
Sbjct: 74 --ITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSF 131
Query: 216 GALDKAEEIV----LNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGT 271
+ AEEI Y+ + + EI + D V A G+
Sbjct: 132 ELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSEVKFDSIVVAAGS 191
Query: 272 GGTITGTGRFLKMMNKEIKVVGVEPA-----ERSVISGENA--------GYVPSILDVQL 318
GGT+ G L ++N++I+ VG+ S +
Sbjct: 192 GGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDY 251
Query: 319 LDEVIKVTNDEAVNMARRLALEEGLLV 345
E + R++ EG+++
Sbjct: 252 SFGEYGKITGEVAQIIRKVGTREGIIL 278
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Yeast (Hansenula saturnus) [TaxId: 4906]}
Length = 341
Score = 94.7 bits (234), Expect = 1e-22
Identities = 45/293 (15%), Positives = 78/293 (26%), Gaps = 41/293 (13%)
Query: 91 GVNIAEDVTQLIGRTPMVYLNKVTE--GCVGNVAAKLESMEPCRSV---KDRIGYSMITD 145
GV G +P+ LN++++ G NV AK E + K R ++ D
Sbjct: 2 GVAKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPD 61
Query: 146 AEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEI 205
E V + N +A +AA G K ++ +
Sbjct: 62 IVEGD---YTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGN 118
Query: 206 ILTDP-------------EKGLRGALDKAEEIVLNT--PNAYMFQQFDNMANLKIHFDST 250
I + G+R + A + + + + + F
Sbjct: 119 IELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYGGLGFVGF 178
Query: 251 GPEIWEDTL---GCVDIFVAAIGTGGTITGTGRFLK-----MMNKEIKVVGVEPAERSVI 302
E+ + D V TG T G + I +
Sbjct: 179 ADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQT 238
Query: 303 SGEN----------AGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
+ LD + V N+ + R A +EG+L
Sbjct: 239 LRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLT 291
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 386
Score = 92.6 bits (229), Expect = 1e-21
Identities = 53/300 (17%), Positives = 101/300 (33%), Gaps = 60/300 (20%)
Query: 102 IGR-TPMVYLNKVTEGCVG-NVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVL 159
GR TP+ Y ++TE G + K E + + K A+ G ++
Sbjct: 47 AGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGKTR----LI 102
Query: 160 VEPTTGNTGLGIAFVAAVKGYKLIVTMPA---STNLERRILLRAFGAEIILTDP-EKGLR 215
E G G+ A A+ G K+ + M A ++ GA +I + + L+
Sbjct: 103 AETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLK 162
Query: 216 GALDKAEEIVLNTP------NAYMFQQFDNMANLKIHFDSTGPEI---WEDTLGCVDIFV 266
A+++A + T + ++ G E + G + +
Sbjct: 163 DAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVI 222
Query: 267 AAIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGEN-------------------- 306
A GG+ + + +K++K+VGVE + + SG++
Sbjct: 223 VACVGGGSNAMGIFYPFVNDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFL 282
Query: 307 ---------------------AGYVPSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
G + L E + VT++EA+ L+ EG++
Sbjct: 283 QDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIP 342
>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 477
Score = 90.8 bits (224), Expect = 8e-21
Identities = 33/282 (11%), Positives = 80/282 (28%), Gaps = 38/282 (13%)
Query: 98 VTQLIGRTPMVYLNKVTE--GCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPG 155
V+ G + + + + + + ++ K + S KD +++ +
Sbjct: 115 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRP 174
Query: 156 KTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLR 215
+ +TG+T ++ A G IV +P + + L++ + +
Sbjct: 175 VVGVGCASTGDTSAALSAYCASAGIPSIVFLP-ANKISMAQLVQPIANGAFVLSIDTDFD 233
Query: 216 GALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTI 275
G + EI N L+ + + + D + G G I
Sbjct: 234 GCMKLIREI--TAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNI 291
Query: 276 TGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSIL--------------------- 314
+ KM +E+ +V P +
Sbjct: 292 YAFYKGFKMC-QELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQI 350
Query: 315 -----------DVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
++ + +++ +E + A A G+ +
Sbjct: 351 GDPVSIDRAVYALKKCNGIVEEATEEELMDAMAQADSTGMFI 392
>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 319
Score = 81.8 bits (200), Expect = 4e-18
Identities = 41/267 (15%), Positives = 77/267 (28%), Gaps = 29/267 (10%)
Query: 101 LIGRTPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLV 160
L +TP+ +++ +V K++S +P S K R + G V
Sbjct: 4 LHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQ-----GCAHFV 58
Query: 161 EPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDK 220
+ GN G+ A+ A G + +P +T L+ GA +
Sbjct: 59 CSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDEAFE--L 116
Query: 221 AEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGTITGTGR 280
A+ + N P FD+ + H I ++ G G
Sbjct: 117 AKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQG 176
Query: 281 FLKMMNKEIKVVGVEPAERSVISGENAGYVPSILDV----------------------QL 318
+ ++ V+ +E L +
Sbjct: 177 LQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEH 236
Query: 319 LDEVIKVTNDEAVNMARRLALEEGLLV 345
+++ EAV + +E +LV
Sbjct: 237 PIFSEVISDQEAVAAIEKFVDDEKILV 263
>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella
typhimurium [TaxId: 90371]}
Length = 390
Score = 79.9 bits (196), Expect = 2e-17
Identities = 46/299 (15%), Positives = 87/299 (29%), Gaps = 59/299 (19%)
Query: 102 IGR-TPMVYLNKVTEGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPGKTVLV 160
GR T + +T G + K E + + K A+ G
Sbjct: 52 AGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGA 111
Query: 161 EPTTGNTGLGIAFVAAVKGYKLIVTMPASTN---LERRILLRAFGAEIILTDP-EKGLRG 216
G+ A +A+ G K + M A +R GAE+I L+
Sbjct: 112 G----QHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKD 167
Query: 217 ALDKA-EEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEI--------WEDTLGCVDIFVA 267
A ++A + + A+ + + D G + V
Sbjct: 168 ACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVI 227
Query: 268 AIGTGGTITGTGRFLKMMNKEIKVVGVEPAERSVISGENAGYV----------------- 310
A GG+ + + + ++GVEP + +GE+ +
Sbjct: 228 ACVGGGSNAIGMFADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQ 287
Query: 311 ------------------------PSILDVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
+ L+ + + +T+DEA+ + L EG++
Sbjct: 288 TADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIP 346
>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus
[TaxId: 274]}
Length = 351
Score = 74.7 bits (182), Expect = 1e-15
Identities = 52/275 (18%), Positives = 86/275 (31%), Gaps = 37/275 (13%)
Query: 98 VTQLIGRTPMVYLNKVT--EGCVGNVAAKLESMEPCRSVKDRIGYSMITDAEESGDITPG 155
++ L G TP++ L + AK E + P S KDR ++ A E G
Sbjct: 22 ISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVE-----GG 76
Query: 156 KTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPAS-TNLERRILLRAFGAEIILTDPEKGL 214
+ +TGNT A AA G IV +PA L + GA I+ +
Sbjct: 77 AQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFD- 135
Query: 215 RGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGT 274
D T + + + E+ ++ +G G
Sbjct: 136 ----DALRLTQKLTEAFPVALVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGN 191
Query: 275 IT------GTGRFLKMMNKEIKVVGVEPAERSVISGENAGYVPSI--------------- 313
IT L + +++G + A + + P
Sbjct: 192 ITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPASWQG 251
Query: 314 ---LDVQLLDEVIKVTNDEAVNMARRLALEEGLLV 345
+ + VT++E + R LA EEG+
Sbjct: 252 AVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFC 286
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA
{Aspergillus nidulans [TaxId: 162425]}
Length = 350
Score = 36.2 bits (82), Expect = 0.005
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 156 KTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEII---LTDPEK 212
KT+ V TG G + VAA G+ + + + L L + L +
Sbjct: 4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVP 63
Query: 213 GLRGALDKAEEIVLNTPNAYMFQQFDNM 240
+ + A +NT + +
Sbjct: 64 LMDTLFEGAHLAFINTTSQAGDEIAIGK 91
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo
sapiens), different isozymes [TaxId: 9606]}
Length = 176
Score = 30.7 bits (68), Expect = 0.14
Identities = 22/152 (14%), Positives = 46/152 (30%), Gaps = 15/152 (9%)
Query: 139 GYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILL 198
GY + + PG V G I ++I N ++
Sbjct: 16 GYGAAVNT---AKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI---NKDKFARA 69
Query: 199 RAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDT 258
+ FGA + + +E+++ + + F+ + N+K+ + +
Sbjct: 70 KEFGATECINPQD-----FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAA----LEACH 120
Query: 259 LGCVDIFVAAIGTGGTITGTGRFLKMMNKEIK 290
G V + G T F + + K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWK 152
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus
callarias) [TaxId: 8053]}
Length = 175
Score = 30.8 bits (68), Expect = 0.16
Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 18/162 (11%)
Query: 139 GYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILL 198
G+ + + PG T V + + ++I ++
Sbjct: 16 GFGAAVNT---AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNP---DKFEKA 69
Query: 199 RAFGAEIILTDPEKG----------LRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFD 248
+ FGA + + G +D + E V N M ++
Sbjct: 70 KVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNV--GVMRNALESCLKGWGVSV 127
Query: 249 STGPEIWEDTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIK 290
G D +A G++ G + + K +K
Sbjct: 128 LVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVK 169
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase
{Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 251
Score = 30.8 bits (69), Expect = 0.19
Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 15/113 (13%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRI-LLRAFGAEII----- 206
K LV T G+G IA + A +I + + + +++FG E
Sbjct: 10 NKVALV--TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 67
Query: 207 LTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTL 259
++ E + + +L + F + WED L
Sbjct: 68 VSKKE-----EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVL 115
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 237
Score = 30.5 bits (68), Expect = 0.22
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 14/106 (13%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEK 212
++VLV T GN G+G IA A G+K+ VT S + FG E+ +TD +
Sbjct: 7 SRSVLV--TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----GLFGVEVDVTDSD- 58
Query: 213 GLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDT 258
A+D+A V + + E +E
Sbjct: 59 ----AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKV 100
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 30.5 bits (68), Expect = 0.23
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 14/137 (10%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLER--RILLRAFGAEIILTDP 210
GK V+V T + G+G +A+ A G ++VT + L++ L A
Sbjct: 14 GKKVIV--TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 211 EKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIG 270
++ +++ N ++ ++ +
Sbjct: 72 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM--------EVN 123
Query: 271 TGGTITGTGRFLKMMNK 287
+ T L M+ +
Sbjct: 124 FLSYVVLTVAALPMLKQ 140
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 30.4 bits (68), Expect = 0.26
Identities = 18/113 (15%), Positives = 34/113 (30%), Gaps = 19/113 (16%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEII------ 206
K V+ G+G + + K V + N L+A ++
Sbjct: 5 NKNVIF--VAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62
Query: 207 -LTDPEKGLRGALDKAEE------IVLNTPNAYMFQQFDNM--ANLKIHFDST 250
+T P + L K + I++N Q + N ++T
Sbjct: 63 DVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTT 115
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus
caballus) [TaxId: 9796]}
Length = 176
Score = 30.0 bits (66), Expect = 0.31
Identities = 19/156 (12%), Positives = 41/156 (26%), Gaps = 17/156 (10%)
Query: 139 GYSMITDAEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILL 198
GY +T G T V G G+G++ + K + N ++
Sbjct: 16 GYGSAVKV---AKVTQGSTCAV---FGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA 69
Query: 199 RAFGAEIILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDT 258
+ GA + + +E++ N + F+ + L +
Sbjct: 70 KEVGATECVNPQDYK-----KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYG 124
Query: 259 LGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGV 294
+ + G ++ G
Sbjct: 125 VSVIV------GVPPDSQNLSMNPMLLLSGRTWKGA 154
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana
perezi) [TaxId: 8403]}
Length = 174
Score = 29.1 bits (64), Expect = 0.58
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 146 AEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFG 202
A + +TPG T V G G+G + + K + T+ ++ G
Sbjct: 19 AVNTAKVTPGSTCAV---FGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELG 72
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus
musculus), class II [TaxId: 10090]}
Length = 174
Score = 28.4 bits (62), Expect = 0.99
Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 14/145 (9%)
Query: 146 AEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEI 205
A + +TPG T V G +G++ + K + N E+ +A GA
Sbjct: 20 AINTAKVTPGSTCAV---FGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD 76
Query: 206 ILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIF 265
L E ++++ + D + + D
Sbjct: 77 CLNPRELD-----KPVQDVITELTAGGVDYSLDCAGTAQTLKAAV------DCTVLGWGS 125
Query: 266 VAAIGTGGTITGTGRFLKMMNKEIK 290
+G ++ + I
Sbjct: 126 CTVVGAKVDEMTIPTVDVILGRSIN 150
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium
tuberculosis, TB, gene InhA [TaxId: 1773]}
Length = 268
Score = 28.6 bits (62), Expect = 1.1
Identities = 21/119 (17%), Positives = 34/119 (28%), Gaps = 26/119 (21%)
Query: 155 GKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGL 214
GK +LV + T IAF A + + GA+++LT
Sbjct: 6 GKRILV--SGIITDSSIAFHIA-------------------RVAQEQGAQLVLTG----- 39
Query: 215 RGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGG 273
L + I P + D + + +D V +IG
Sbjct: 40 FDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMP 98
>d2rdea2 b.45.2.2 (A:24-137) Hypothetical protein VCA0042,
N-terminal domain {Vibrio cholerae O395 [TaxId: 345073]}
Length = 114
Score = 27.5 bits (61), Expect = 1.2
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 4/70 (5%)
Query: 141 SMITDAEESGDITPGKTVLVEPTTGN---TGLGIAFVAAVKGYKLIVTMPASTNLERRIL 197
S I + + + + TT F+ L+V MP + + +
Sbjct: 2 STINSTDALAMVEHSSELTLSITTPVGTKFVCRTPFIGTHTDKFLLVEMPKISADDLQYF 61
Query: 198 LRAFGAEIIL 207
+ G + +
Sbjct: 62 FQE-GFWMNI 70
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase
{Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 259
Score = 28.2 bits (62), Expect = 1.4
Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 24/142 (16%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRIL--LRAFGAEII---- 206
GK L T G+G IA +G ++V +S+ ++ L+ GA+ +
Sbjct: 6 GKVALT--TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63
Query: 207 -LTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIF 265
++ P + + ++ F ++ + E+++
Sbjct: 64 DISKPS-----EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVF------ 112
Query: 266 VAAIGTGGTITGTGRFLKMMNK 287
+ T G + LK +
Sbjct: 113 --NLNTRGQFFVAQQGLKHCRR 132
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus
bisporus) [TaxId: 5341]}
Length = 260
Score = 28.1 bits (62), Expect = 1.5
Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 18/101 (17%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRI--LLRAFGAEII---- 206
KT++V T GN G+G A G + V ++ + + + FG +
Sbjct: 9 NKTIIV--TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66
Query: 207 -LTDPEKGLRGALDKAEE------IVLNTPNAYMFQQFDNM 240
+++ + + + + + ++ + + +
Sbjct: 67 DVSNTD-IVTKTIQQIDADLGPISGLIANAGVSVVKPATEL 106
>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId:
5741]}
Length = 181
Score = 27.7 bits (61), Expect = 1.5
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 257 DTLGCVDIFVAAIGTGGTITGTGRFLKMMNKEIKVVGV 294
D + D +A TGGT+ + + + + +
Sbjct: 117 DVVLLHDDVLA---TGGTLLAAIELCETAGVKPENIYI 151
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 27.7 bits (61), Expect = 2.2
Identities = 16/114 (14%), Positives = 35/114 (30%), Gaps = 26/114 (22%)
Query: 157 TVLVEPTTGNT---GLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDP--E 211
T +V T G+G A + G+ + + +++ L AF P E
Sbjct: 2 TAIV---TNVKHFGGMGSALRLSEAGHTVACH---DESFKQKDELEAFAETYPQLKPMSE 55
Query: 212 KGLRGALDKAEE------IVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTL 259
+ ++ ++++ N +F D E + +
Sbjct: 56 QEPAELIEAVTSAYGQVDVLVS--NDIFAPEFQP-------IDKYAVEDYRGAV 100
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 27.4 bits (60), Expect = 2.5
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRIL--LRAFGAEII---- 206
GK V++ T +TGLG +A A + K++V + + +L ++ G E I
Sbjct: 7 GKVVVI--TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 207 -LTDPE 211
+T
Sbjct: 65 DVTVES 70
>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori
[TaxId: 210]}
Length = 274
Score = 27.3 bits (59), Expect = 2.6
Identities = 20/132 (15%), Positives = 34/132 (25%), Gaps = 28/132 (21%)
Query: 155 GKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTDPEKGL 214
GK L+ IA+ A GA + T L
Sbjct: 5 GKKGLI--VGVANNKSIAYGIA-------------------QSCFNQGATLAFTY----L 39
Query: 215 RGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVAAIGTGGT 274
+L+K + N+ + D + + LG +D V ++
Sbjct: 40 NESLEKRVRPIAQELNSPYVYELDVSKE---EHFKSLYNSVKKDLGSLDFIVHSVAFAPK 96
Query: 275 ITGTGRFLKMMN 286
G L+
Sbjct: 97 EALEGSLLETSK 108
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol
dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Length = 174
Score = 26.8 bits (58), Expect = 3.1
Identities = 22/154 (14%), Positives = 39/154 (25%), Gaps = 25/154 (16%)
Query: 146 AEESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEI 205
E DI G +V+V G +G+ +A K + + + +GA
Sbjct: 19 GAELADIEMGSSVVV---IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATD 75
Query: 206 ILTDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTG-PEIWEDTLGCVD- 263
IL N + N + + G E + V
Sbjct: 76 ILNYK----------------NGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119
Query: 264 ----IFVAAIGTGGTITGTGRFLKMMNKEIKVVG 293
+ G+G + + G
Sbjct: 120 GGIISNINYHGSGDALLIPRVEWGCGMAHKTIKG 153
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR,
naphtol reductase) {Rice blast fungus (Magnaporthe
grisea) [TaxId: 148305]}
Length = 272
Score = 27.0 bits (59), Expect = 3.7
Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 18/101 (17%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRIL--LRAFGAEII---- 206
GK LV T G+G +A +G K+IV ST ++ ++ G++
Sbjct: 18 GKVALV--TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75
Query: 207 -LTDPEKGLRGALDKAEE------IVLNTPNAYMFQQFDNM 240
+ E + ++A + IV + F ++
Sbjct: 76 NVGVVE-DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV 115
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS),
large subunit PreATP-grasp domains {Escherichia coli
[TaxId: 562]}
Length = 121
Score = 26.0 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 182 LIVTMPASTNLERRILLRAFGAEIILTDPEKGLRGALDKAE 222
+IV T L+ L A G +I T P+ A+D+AE
Sbjct: 83 VIVQYGGQTPLKLARALEAAGVPVIGTSPD-----AIDRAE 118
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 26.9 bits (58), Expect = 4.1
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 154 PGKTVLVEPTTGNTGLG--IAFVAAVKGYKLIV 184
P TVLV T G G+G IA A +G ++
Sbjct: 8 PTGTVLV--TGGTGGVGGQIARWLARRGAPHLL 38
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter
oxydans [TaxId: 442]}
Length = 260
Score = 26.7 bits (58), Expect = 4.5
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 10/65 (15%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLER-RILLRAFGAEII----- 206
GK LV T +G A A +G + + LE+ +R G E
Sbjct: 5 GKVCLV--TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62
Query: 207 LTDPE 211
+T E
Sbjct: 63 VTSEE 67
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 251
Score = 26.5 bits (58), Expect = 5.1
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 11/66 (16%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRI--LLRAFGAEII---- 206
G+ LV T G+ GLG IA A G ++V L +G E +
Sbjct: 5 GRVALV--TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62
Query: 207 -LTDPE 211
+++ E
Sbjct: 63 DVSNYE 68
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 26.5 bits (58), Expect = 5.1
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 10/65 (15%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRI-LLRAFGAEII----- 206
GK ++ T G+G IA A G ++V+ + + ++ G +
Sbjct: 11 GKCAII--TGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68
Query: 207 LTDPE 211
+T +
Sbjct: 69 ITSEQ 73
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 256
Score = 26.3 bits (57), Expect = 5.9
Identities = 17/109 (15%), Positives = 36/109 (33%), Gaps = 12/109 (11%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVT---MPASTNLERRILLRAFGAEIILTD 209
GKT L+ T G+G A +G ++ + + A+ I A + +TD
Sbjct: 5 GKTALI--TGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTD 62
Query: 210 PEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDT 258
++D+ +L+ + + E ++
Sbjct: 63 QA-----SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRL 106
>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of
estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 302
Score = 26.1 bits (57), Expect = 5.9
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 35/129 (27%)
Query: 155 GKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTD---PE 211
G+ VLV T GLG A+ + GA +++ D
Sbjct: 7 GRVVLV--TGAGGGLGRAYA---------------------LAFAERGALVVVNDLGGDF 43
Query: 212 KGLRGALDKAEEIV--LNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFV--A 267
KG+ A+++V + +D++ + + DT G +D+ V A
Sbjct: 44 KGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA-----LDTFGRIDVVVNNA 98
Query: 268 AIGTGGTIT 276
I + +
Sbjct: 99 GILRDRSFS 107
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 25.9 bits (56), Expect = 6.3
Identities = 6/33 (18%), Positives = 10/33 (30%), Gaps = 4/33 (12%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVT 185
+ VLV G LG + + +
Sbjct: 2 ARRVLV--YGGRGALGSRCVQAFRARNWWVASI 32
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga
maritima [TaxId: 2336]}
Length = 182
Score = 25.7 bits (55), Expect = 7.1
Identities = 22/147 (14%), Positives = 44/147 (29%), Gaps = 11/147 (7%)
Query: 148 ESGDITPGKTVLVEPTTGNTGLGIAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIIL 207
E + GKTV++ G LG+ V + + + + R L GA++ L
Sbjct: 22 EYPESFAGKTVVI---QGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTL 78
Query: 208 TDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWEDTLGCVDIFVA 267
E + +I ++ + + L + G VA
Sbjct: 79 NRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG------GF--YSVA 130
Query: 268 AIGTGGTITGTGRFLKMMNKEIKVVGV 294
+ + ++ K G+
Sbjct: 131 GVAVPQDPVPFKVYEWLVLKNATFKGI 157
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Escherichia coli [TaxId: 562]}
Length = 243
Score = 25.9 bits (56), Expect = 7.1
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVT 185
GK LV T + G+G IA A +G K+I T
Sbjct: 4 GKIALV--TGASRGIGRAIAETLAARGAKVIGT 34
>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
{Pseudomonas sp., lb400 [TaxId: 306]}
Length = 276
Score = 25.8 bits (56), Expect = 7.2
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 23/142 (16%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEII-----L 207
G+ VL+ T G +GLG + +G K+ V ++ L L G ++ +
Sbjct: 5 GEAVLI--TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE--LETDHGDNVLGIVGDV 60
Query: 208 TDPEKGLRGALDKAEEIVLNTPNAYMFQQFDNMANLKIHFDSTGPEIWED--TLGCVDIF 265
E + A + F + D + +D + + +L
Sbjct: 61 RSLE-DQKQAASRCVA---------RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDE 110
Query: 266 VAAIGTGGTITGTGRFLKMMNK 287
V I G I L +
Sbjct: 111 VFHINVKGYIHAVKACLPALVA 132
>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase
{Thermus thermophilus, TTHB020 [TaxId: 274]}
Length = 241
Score = 25.8 bits (56), Expect = 7.3
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEII-----L 207
GKT+LV T +G+G + A +G L+ L + A AE I +
Sbjct: 5 GKTILV--TGAASGIGRAALDLFAREGASLVAVDREERLLAE--AVAALEAEAIAVVADV 60
Query: 208 TDPE 211
+DP+
Sbjct: 61 SDPK 64
>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId:
562]}
Length = 258
Score = 26.0 bits (56), Expect = 7.4
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 155 GKTVLVEPTTGNTGLGIAFVAAVK----GYKLIVT 185
GK +LV T + L IA+ A G +L T
Sbjct: 5 GKRILV--TGVASKLSIAYGIAQAMHREGAELAFT 37
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus
[TaxId: 274]}
Length = 256
Score = 25.6 bits (55), Expect = 8.2
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVT 185
GK LV T LG IA G ++ ++
Sbjct: 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALS 40
>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 25.6 bits (55), Expect = 8.3
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVT 185
G ++ T G +GLG A +G ++
Sbjct: 5 GLVAVI--TGGASGLGLATAERLVGQGASAVLL 35
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 297
Score = 25.8 bits (56), Expect = 9.3
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVT 185
G+ +V T G TG+G I G +++
Sbjct: 12 GQVAIV--TGGATGIGKAIVKELLELGSNVVIA 42
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermus thermophilus [TaxId: 274]}
Length = 242
Score = 25.4 bits (55), Expect = 9.9
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Query: 155 GKTVLVEPTTGNTGLG--IAFVAAVKGYKLIVTMPASTNLERRILLRAFGAEIILTD 209
K VL+ T G+G + A +G +L+ L A GA ++ D
Sbjct: 5 DKAVLI--TGAAHGIGRATLELFAKEGARLVACDIEEGPLRE--AAEAVGAHPVVMD 57
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.133 0.369
Gapped
Lambda K H
0.267 0.0519 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,216,991
Number of extensions: 57077
Number of successful extensions: 284
Number of sequences better than 10.0: 1
Number of HSP's gapped: 246
Number of HSP's successfully gapped: 79
Length of query: 347
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 261
Effective length of database: 1,226,816
Effective search space: 320198976
Effective search space used: 320198976
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.7 bits)